Query 041205
Match_columns 535
No_of_seqs 264 out of 913
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 07:41:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041205.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041205hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fpf_A Mtnas, putative unchara 100.0 1.9E-48 6.3E-53 392.8 24.5 252 17-281 5-264 (298)
2 3dr5_A Putative O-methyltransf 99.7 9.5E-18 3.3E-22 159.2 7.8 104 133-241 58-164 (221)
3 4gek_A TRNA (CMO5U34)-methyltr 99.7 8E-17 2.7E-21 157.1 14.1 125 107-240 51-178 (261)
4 3dh0_A SAM dependent methyltra 99.7 1.5E-16 5E-21 145.7 14.8 155 122-281 28-193 (219)
5 3ntv_A MW1564 protein; rossman 99.7 1.1E-16 3.8E-21 151.0 12.0 108 128-241 68-177 (232)
6 3r3h_A O-methyltransferase, SA 99.7 2.8E-17 9.6E-22 157.7 6.9 109 128-241 57-171 (242)
7 3duw_A OMT, O-methyltransferas 99.7 1.3E-16 4.3E-21 147.6 10.5 107 129-241 56-168 (223)
8 3tfw_A Putative O-methyltransf 99.7 2.6E-16 8.8E-21 150.5 11.5 107 129-241 61-171 (248)
9 3cbg_A O-methyltransferase; cy 99.7 1.9E-16 6.4E-21 149.8 10.1 108 129-241 70-183 (232)
10 3c3y_A Pfomt, O-methyltransfer 99.7 4.6E-16 1.6E-20 148.1 12.8 108 129-241 68-182 (237)
11 1sui_A Caffeoyl-COA O-methyltr 99.7 4.6E-16 1.6E-20 149.7 12.6 108 129-241 77-191 (247)
12 3u81_A Catechol O-methyltransf 99.7 1.6E-16 5.3E-21 148.1 9.0 112 127-241 54-171 (221)
13 3tr6_A O-methyltransferase; ce 99.7 2E-16 7E-21 146.0 9.4 108 129-241 62-175 (225)
14 3bus_A REBM, methyltransferase 99.6 2E-15 6.7E-20 143.0 15.8 133 105-241 29-167 (273)
15 3ocj_A Putative exported prote 99.6 1E-15 3.5E-20 149.4 13.9 110 128-240 115-227 (305)
16 3c3p_A Methyltransferase; NP_9 99.6 2.4E-16 8.2E-21 145.1 8.0 105 130-241 55-161 (210)
17 1nkv_A Hypothetical protein YJ 99.6 1.1E-15 3.7E-20 143.1 11.8 117 120-241 25-141 (256)
18 3dlc_A Putative S-adenosyl-L-m 99.6 2.2E-15 7.6E-20 136.1 12.6 111 125-240 38-148 (219)
19 2o57_A Putative sarcosine dime 99.6 3.3E-15 1.1E-19 143.7 14.3 133 105-241 46-188 (297)
20 2avd_A Catechol-O-methyltransf 99.6 1.4E-15 4.8E-20 140.8 11.3 109 128-241 66-180 (229)
21 1xdz_A Methyltransferase GIDB; 99.6 2.7E-15 9.1E-20 141.7 13.2 142 130-283 69-221 (240)
22 1vl5_A Unknown conserved prote 99.6 1.6E-15 5.5E-20 143.3 11.1 128 107-240 13-140 (260)
23 3g89_A Ribosomal RNA small sub 99.6 1.1E-14 3.6E-19 140.8 16.9 140 130-281 79-229 (249)
24 2gpy_A O-methyltransferase; st 99.6 7E-16 2.4E-20 144.2 7.9 107 129-241 52-161 (233)
25 3e05_A Precorrin-6Y C5,15-meth 99.6 6.1E-15 2.1E-19 134.8 13.7 119 116-241 24-143 (204)
26 3orh_A Guanidinoacetate N-meth 99.6 2.9E-15 9.9E-20 142.5 11.4 106 130-241 59-171 (236)
27 3jwg_A HEN1, methyltransferase 99.6 7.1E-15 2.4E-19 135.2 13.2 127 111-240 9-141 (219)
28 1jsx_A Glucose-inhibited divis 99.6 8.8E-15 3E-19 133.1 13.6 138 131-281 65-205 (207)
29 2hnk_A SAM-dependent O-methylt 99.6 2E-15 6.8E-20 142.2 9.6 108 129-241 58-182 (239)
30 2xvm_A Tellurite resistance pr 99.6 3.4E-14 1.2E-18 127.2 17.0 108 126-240 27-136 (199)
31 3f4k_A Putative methyltransfer 99.6 6.6E-15 2.2E-19 137.9 12.8 109 128-241 43-151 (257)
32 3njr_A Precorrin-6Y methylase; 99.6 1.9E-14 6.5E-19 134.1 15.6 118 114-241 37-155 (204)
33 3kkz_A Uncharacterized protein 99.6 6E-15 2E-19 140.2 12.2 108 129-241 44-151 (267)
34 3jwh_A HEN1; methyltransferase 99.6 1.1E-14 3.8E-19 134.0 13.1 109 129-240 27-141 (217)
35 3vc1_A Geranyl diphosphate 2-C 99.6 1E-14 3.6E-19 142.7 13.5 116 120-240 105-221 (312)
36 3eey_A Putative rRNA methylase 99.6 3.8E-14 1.3E-18 128.3 15.7 111 129-241 20-140 (197)
37 1pjz_A Thiopurine S-methyltran 99.6 4.5E-15 1.5E-19 137.6 9.3 104 128-235 19-135 (203)
38 3g5t_A Trans-aconitate 3-methy 99.6 1.3E-14 4.5E-19 140.6 12.8 108 130-240 35-149 (299)
39 1y8c_A S-adenosylmethionine-de 99.6 2.2E-14 7.7E-19 132.1 13.6 102 130-239 36-141 (246)
40 1kpg_A CFA synthase;, cyclopro 99.6 4.1E-14 1.4E-18 135.5 15.5 115 120-241 53-169 (287)
41 3hm2_A Precorrin-6Y C5,15-meth 99.6 4E-14 1.4E-18 124.9 14.0 109 125-241 19-128 (178)
42 4htf_A S-adenosylmethionine-de 99.6 3E-14 1E-18 136.6 13.7 107 130-241 67-174 (285)
43 3hnr_A Probable methyltransfer 99.6 3.6E-14 1.2E-18 129.9 13.4 100 130-240 44-145 (220)
44 3mti_A RRNA methylase; SAM-dep 99.5 3.3E-14 1.1E-18 127.5 12.5 107 129-241 20-136 (185)
45 3i9f_A Putative type 11 methyl 99.5 9.4E-14 3.2E-18 122.6 14.9 142 128-285 14-164 (170)
46 3g5l_A Putative S-adenosylmeth 99.5 3E-14 1E-18 133.7 12.4 115 118-240 31-145 (253)
47 3p9n_A Possible methyltransfer 99.5 1E-13 3.6E-18 125.5 15.5 107 130-241 43-154 (189)
48 3mgg_A Methyltransferase; NYSG 99.5 3.2E-14 1.1E-18 135.2 12.6 110 128-241 34-143 (276)
49 2yqz_A Hypothetical protein TT 99.5 4.2E-14 1.5E-18 132.2 13.1 105 128-239 36-140 (263)
50 2fk8_A Methoxy mycolic acid sy 99.5 8.9E-14 3E-18 135.6 15.9 115 120-241 79-195 (318)
51 3hem_A Cyclopropane-fatty-acyl 99.5 9E-14 3.1E-18 134.9 15.8 115 120-241 61-184 (302)
52 3lcc_A Putative methyl chlorid 99.5 4E-14 1.4E-18 131.8 12.7 105 131-241 66-172 (235)
53 3m70_A Tellurite resistance pr 99.5 1.5E-13 5.3E-18 131.7 17.1 103 130-240 119-223 (286)
54 3dtn_A Putative methyltransfer 99.5 5.5E-14 1.9E-18 130.2 13.3 105 129-240 42-148 (234)
55 2p8j_A S-adenosylmethionine-de 99.5 4.7E-14 1.6E-18 127.8 12.3 105 130-240 22-128 (209)
56 1xxl_A YCGJ protein; structura 99.5 5.4E-14 1.8E-18 132.1 12.2 109 126-240 16-124 (239)
57 3ujc_A Phosphoethanolamine N-m 99.5 4.2E-14 1.4E-18 132.1 11.4 112 123-241 47-160 (266)
58 3mb5_A SAM-dependent methyltra 99.5 1.5E-13 5.3E-18 129.4 14.8 155 119-281 81-253 (255)
59 2gb4_A Thiopurine S-methyltran 99.5 8.6E-14 2.9E-18 135.1 13.2 105 130-238 67-189 (252)
60 3e8s_A Putative SAM dependent 99.5 1.1E-13 3.7E-18 125.7 13.0 99 130-241 51-153 (227)
61 3evz_A Methyltransferase; NYSG 99.5 2E-13 6.7E-18 126.4 14.9 146 129-282 53-221 (230)
62 1dus_A MJ0882; hypothetical pr 99.5 3E-13 1E-17 119.6 14.9 116 120-241 41-158 (194)
63 3cvo_A Methyltransferase-like 99.5 1E-13 3.6E-18 132.9 12.9 101 130-241 29-155 (202)
64 2p35_A Trans-aconitate 2-methy 99.5 5E-14 1.7E-18 131.7 10.0 109 123-241 25-133 (259)
65 3ofk_A Nodulation protein S; N 99.5 1.8E-13 6.2E-18 125.2 13.5 107 126-241 46-155 (216)
66 1ve3_A Hypothetical protein PH 99.5 3.3E-13 1.1E-17 123.5 15.1 105 130-241 37-143 (227)
67 3cgg_A SAM-dependent methyltra 99.5 2.2E-13 7.5E-18 120.6 13.4 159 107-281 18-195 (195)
68 1zx0_A Guanidinoacetate N-meth 99.5 1.2E-13 4.1E-18 129.6 12.1 106 130-241 59-171 (236)
69 3sm3_A SAM-dependent methyltra 99.5 1.1E-13 3.6E-18 126.7 11.4 106 130-240 29-141 (235)
70 1l3i_A Precorrin-6Y methyltran 99.5 2.8E-13 9.5E-18 119.6 13.4 108 126-241 28-135 (192)
71 2a14_A Indolethylamine N-methy 99.5 1.2E-13 4.3E-18 132.5 12.0 109 128-240 52-197 (263)
72 1wzn_A SAM-dependent methyltra 99.5 4.6E-13 1.6E-17 125.3 15.4 104 130-241 40-146 (252)
73 3pfg_A N-methyltransferase; N, 99.5 4E-13 1.4E-17 127.1 15.1 98 130-239 49-150 (263)
74 3gu3_A Methyltransferase; alph 99.5 1.4E-13 5E-18 132.9 12.1 109 128-242 19-128 (284)
75 3g2m_A PCZA361.24; SAM-depende 99.5 1.3E-13 4.6E-18 133.5 11.9 118 117-241 69-191 (299)
76 3g07_A 7SK snRNA methylphospha 99.5 7.9E-14 2.7E-18 136.3 10.1 108 130-240 45-220 (292)
77 3uwp_A Histone-lysine N-methyl 99.5 6.5E-13 2.2E-17 140.3 17.0 153 80-240 124-288 (438)
78 2kw5_A SLR1183 protein; struct 99.5 3.1E-13 1.1E-17 122.5 12.6 103 130-241 29-132 (202)
79 1ri5_A MRNA capping enzyme; me 99.5 2.5E-13 8.6E-18 129.2 12.5 108 130-241 63-175 (298)
80 3bkx_A SAM-dependent methyltra 99.5 3.7E-13 1.3E-17 127.5 13.4 121 118-240 30-159 (275)
81 1yzh_A TRNA (guanine-N(7)-)-me 99.5 4.4E-13 1.5E-17 123.9 13.4 108 130-241 40-157 (214)
82 2p7i_A Hypothetical protein; p 99.5 1.8E-13 6E-18 125.7 10.6 102 129-241 40-142 (250)
83 3lbf_A Protein-L-isoaspartate 99.5 3.5E-13 1.2E-17 123.1 12.4 106 124-241 70-175 (210)
84 2fyt_A Protein arginine N-meth 99.5 5.2E-13 1.8E-17 134.4 14.7 129 105-238 26-169 (340)
85 3bkw_A MLL3908 protein, S-aden 99.5 2.9E-13 9.8E-18 125.1 11.8 112 121-241 33-145 (243)
86 2bm8_A Cephalosporin hydroxyla 99.5 9.8E-14 3.3E-18 132.7 8.9 101 130-241 80-188 (236)
87 2esr_A Methyltransferase; stru 99.5 2E-13 6.7E-18 121.6 10.3 108 129-241 29-139 (177)
88 1xtp_A LMAJ004091AAA; SGPP, st 99.5 6.2E-13 2.1E-17 124.0 14.0 111 123-240 85-197 (254)
89 4fsd_A Arsenic methyltransfera 99.5 2.4E-13 8.2E-18 138.1 11.8 111 129-240 81-203 (383)
90 2r3s_A Uncharacterized protein 99.5 6.8E-13 2.3E-17 129.7 14.5 106 130-240 164-271 (335)
91 3dxy_A TRNA (guanine-N(7)-)-me 99.5 3.2E-13 1.1E-17 127.8 11.7 108 130-241 33-151 (218)
92 3lpm_A Putative methyltransfer 99.4 5.5E-13 1.9E-17 127.5 13.3 115 121-239 38-175 (259)
93 3ou2_A SAM-dependent methyltra 99.4 3.2E-13 1.1E-17 122.5 11.0 102 129-241 44-147 (218)
94 1x19_A CRTF-related protein; m 99.4 9.4E-13 3.2E-17 131.5 15.3 113 122-240 181-295 (359)
95 3l8d_A Methyltransferase; stru 99.4 3.5E-13 1.2E-17 124.8 11.2 102 130-240 52-153 (242)
96 2ift_A Putative methylase HI07 99.4 2.8E-13 9.4E-18 125.5 10.5 106 131-241 53-164 (201)
97 3ege_A Putative methyltransfer 99.4 1E-13 3.6E-18 132.1 7.9 106 123-241 26-131 (261)
98 3lec_A NADB-rossmann superfami 99.4 7.8E-13 2.7E-17 129.0 14.1 141 130-281 20-164 (230)
99 2i62_A Nicotinamide N-methyltr 99.4 1E-12 3.5E-17 122.9 14.3 110 128-241 53-199 (265)
100 1nt2_A Fibrillarin-like PRE-rR 99.4 3.9E-13 1.3E-17 126.4 11.5 105 128-240 54-161 (210)
101 4hg2_A Methyltransferase type 99.4 1.5E-13 5.1E-18 134.2 8.8 98 130-240 38-135 (257)
102 2ex4_A Adrenal gland protein A 99.4 7.6E-13 2.6E-17 123.9 13.2 106 131-241 79-186 (241)
103 2fca_A TRNA (guanine-N(7)-)-me 99.4 7.9E-13 2.7E-17 123.6 12.8 108 130-241 37-154 (213)
104 3i53_A O-methyltransferase; CO 99.4 8.3E-13 2.8E-17 130.3 13.5 106 129-240 167-274 (332)
105 3thr_A Glycine N-methyltransfe 99.4 7E-13 2.4E-17 127.0 12.6 109 129-241 55-176 (293)
106 2gs9_A Hypothetical protein TT 99.4 7.4E-13 2.5E-17 120.7 11.9 109 117-241 24-133 (211)
107 2pxx_A Uncharacterized protein 99.4 7.8E-13 2.7E-17 119.4 11.9 138 87-241 8-160 (215)
108 2qe6_A Uncharacterized protein 99.4 1.2E-12 4.3E-17 128.0 14.2 107 130-241 76-197 (274)
109 3h2b_A SAM-dependent methyltra 99.4 7.2E-13 2.5E-17 120.1 11.6 100 131-241 41-142 (203)
110 3r0q_C Probable protein argini 99.4 1.1E-12 3.8E-17 133.7 14.2 108 127-240 59-169 (376)
111 3kr9_A SAM-dependent methyltra 99.4 1.2E-12 4.1E-17 127.1 13.7 141 130-281 14-158 (225)
112 3bxo_A N,N-dimethyltransferase 99.4 1.6E-12 5.6E-17 119.7 13.9 99 130-240 39-141 (239)
113 3q7e_A Protein arginine N-meth 99.4 6.7E-13 2.3E-17 133.9 11.9 107 129-240 64-173 (349)
114 4df3_A Fibrillarin-like rRNA/T 99.4 9.9E-13 3.4E-17 128.3 12.7 106 127-239 73-181 (233)
115 3ccf_A Cyclopropane-fatty-acyl 99.4 2.3E-13 7.8E-18 130.4 7.9 103 127-241 53-155 (279)
116 3grz_A L11 mtase, ribosomal pr 99.4 1.1E-12 3.8E-17 119.6 12.1 126 130-268 59-186 (205)
117 2fhp_A Methylase, putative; al 99.4 5.3E-13 1.8E-17 118.6 9.7 108 129-241 42-155 (187)
118 1qzz_A RDMB, aclacinomycin-10- 99.4 2.2E-12 7.5E-17 128.5 15.1 109 127-241 178-288 (374)
119 1i1n_A Protein-L-isoaspartate 99.4 8E-13 2.7E-17 122.3 10.7 104 129-240 75-182 (226)
120 4dzr_A Protein-(glutamine-N5) 99.4 2.9E-13 9.8E-18 121.9 7.4 142 130-281 29-205 (215)
121 3d2l_A SAM-dependent methyltra 99.4 1.4E-12 4.6E-17 120.6 12.0 102 130-240 32-137 (243)
122 3gjy_A Spermidine synthase; AP 99.4 8.8E-13 3E-17 134.0 11.7 142 133-281 91-247 (317)
123 2vdw_A Vaccinia virus capping 99.4 7.3E-13 2.5E-17 131.7 10.6 108 131-242 48-171 (302)
124 2yxd_A Probable cobalt-precorr 99.4 3.4E-12 1.1E-16 112.2 13.6 106 123-241 27-132 (183)
125 2ozv_A Hypothetical protein AT 99.4 9.7E-13 3.3E-17 127.0 11.1 116 122-240 27-170 (260)
126 3fzg_A 16S rRNA methylase; met 99.4 3E-13 1E-17 130.2 6.9 105 130-240 48-152 (200)
127 2pbf_A Protein-L-isoaspartate 99.4 9.8E-13 3.4E-17 121.8 10.0 106 128-241 77-194 (227)
128 2pwy_A TRNA (adenine-N(1)-)-me 99.4 2.1E-12 7.3E-17 120.9 12.4 113 121-241 86-199 (258)
129 3gdh_A Trimethylguanosine synt 99.4 7.9E-14 2.7E-18 130.3 2.6 105 130-240 77-181 (241)
130 3id6_C Fibrillarin-like rRNA/T 99.4 6E-12 2.1E-16 122.3 15.8 144 128-280 73-230 (232)
131 1i9g_A Hypothetical protein RV 99.4 1.8E-12 6.3E-17 123.6 12.0 116 120-241 88-204 (280)
132 3dp7_A SAM-dependent methyltra 99.4 2.1E-12 7.2E-17 130.1 13.0 106 130-240 178-287 (363)
133 2fpo_A Methylase YHHF; structu 99.4 1.7E-12 5.9E-17 120.2 11.4 105 131-241 54-161 (202)
134 2yxe_A Protein-L-isoaspartate 99.4 3.2E-12 1.1E-16 117.1 12.9 110 123-241 69-178 (215)
135 3dli_A Methyltransferase; PSI- 99.4 7.3E-13 2.5E-17 123.9 8.8 99 129-241 39-141 (240)
136 3e23_A Uncharacterized protein 99.4 1.3E-12 4.4E-17 119.5 10.0 100 129-241 41-142 (211)
137 1tw3_A COMT, carminomycin 4-O- 99.4 4.8E-12 1.6E-16 125.7 14.9 108 127-240 179-288 (360)
138 1xj5_A Spermidine synthase 1; 99.4 2.7E-12 9.4E-17 130.2 13.1 109 129-240 118-235 (334)
139 2aot_A HMT, histamine N-methyl 99.4 1.1E-12 3.8E-17 127.1 9.6 108 130-240 51-172 (292)
140 3mq2_A 16S rRNA methyltransfer 99.4 7.7E-13 2.6E-17 121.8 8.0 107 129-240 25-140 (218)
141 3ckk_A TRNA (guanine-N(7)-)-me 99.4 4.1E-12 1.4E-16 121.7 13.3 108 130-241 45-169 (235)
142 1g6q_1 HnRNP arginine N-methyl 99.4 2.9E-12 9.8E-17 128.1 12.5 105 129-238 36-143 (328)
143 2frn_A Hypothetical protein PH 99.4 2.2E-12 7.5E-17 125.9 11.2 112 119-241 115-226 (278)
144 2b2c_A Spermidine synthase; be 99.4 2.1E-12 7.2E-17 129.9 11.4 109 130-241 107-223 (314)
145 1ws6_A Methyltransferase; stru 99.4 8.7E-13 3E-17 115.3 7.4 102 131-241 41-148 (171)
146 1yb2_A Hypothetical protein TA 99.4 1.6E-12 5.5E-17 125.5 10.0 112 121-241 100-212 (275)
147 1dl5_A Protein-L-isoaspartate 99.4 4.2E-12 1.4E-16 125.6 13.3 110 122-240 66-175 (317)
148 3gnl_A Uncharacterized protein 99.4 2.6E-12 8.9E-17 126.4 11.5 140 130-281 20-164 (244)
149 1ixk_A Methyltransferase; open 99.4 4.2E-12 1.5E-16 126.5 13.2 112 126-240 113-246 (315)
150 1mjf_A Spermidine synthase; sp 99.4 2.2E-12 7.4E-17 126.5 10.6 106 130-240 74-193 (281)
151 1p91_A Ribosomal RNA large sub 99.3 1.3E-11 4.5E-16 117.0 15.5 118 130-263 84-212 (269)
152 3gwz_A MMCR; methyltransferase 99.3 1E-11 3.4E-16 125.4 15.5 151 123-280 194-368 (369)
153 2yvl_A TRMI protein, hypotheti 99.3 6.9E-12 2.4E-16 116.8 13.3 110 122-241 82-191 (248)
154 1o54_A SAM-dependent O-methylt 99.3 4.1E-12 1.4E-16 122.3 12.1 115 119-241 100-214 (277)
155 3ajd_A Putative methyltransfer 99.3 3.8E-12 1.3E-16 123.8 11.8 111 126-240 78-211 (274)
156 3bgv_A MRNA CAP guanine-N7 met 99.3 7.7E-12 2.6E-16 122.2 14.0 110 130-242 33-157 (313)
157 3ggd_A SAM-dependent methyltra 99.3 1.9E-12 6.3E-17 121.0 9.1 103 129-240 54-163 (245)
158 1u2z_A Histone-lysine N-methyl 99.3 1.6E-11 5.5E-16 129.4 17.1 116 121-240 232-359 (433)
159 1fbn_A MJ fibrillarin homologu 99.3 5.8E-12 2E-16 118.1 12.4 104 127-239 70-177 (230)
160 2y1w_A Histone-arginine methyl 99.3 7.1E-12 2.4E-16 126.2 13.7 111 123-239 42-154 (348)
161 3mcz_A O-methyltransferase; ad 99.3 7.3E-12 2.5E-16 124.0 13.6 109 128-240 175-287 (352)
162 3tma_A Methyltransferase; thum 99.3 7.3E-12 2.5E-16 125.5 13.6 119 121-242 193-319 (354)
163 3bwc_A Spermidine synthase; SA 99.3 7.5E-12 2.6E-16 124.2 13.5 110 130-241 94-211 (304)
164 3adn_A Spermidine synthase; am 99.3 4.3E-12 1.5E-16 126.4 11.6 109 130-240 82-198 (294)
165 1g8a_A Fibrillarin-like PRE-rR 99.3 8.3E-12 2.8E-16 115.9 12.5 103 129-239 71-177 (227)
166 2ipx_A RRNA 2'-O-methyltransfe 99.3 8.3E-12 2.8E-16 116.8 12.5 105 128-239 74-181 (233)
167 2o07_A Spermidine synthase; st 99.3 5.6E-12 1.9E-16 125.8 12.0 109 129-240 93-209 (304)
168 2g72_A Phenylethanolamine N-me 99.3 3.1E-12 1.1E-16 123.4 9.7 108 130-240 70-215 (289)
169 2b3t_A Protein methyltransfera 99.3 1.3E-11 4.4E-16 119.0 14.0 106 130-240 108-238 (276)
170 2ip2_A Probable phenazine-spec 99.3 6.3E-12 2.2E-16 123.6 12.0 107 127-240 164-272 (334)
171 2vdv_E TRNA (guanine-N(7)-)-me 99.3 8.3E-12 2.8E-16 118.5 12.3 108 129-240 47-173 (246)
172 1vbf_A 231AA long hypothetical 99.3 8.9E-12 3E-16 115.4 12.1 106 122-241 61-166 (231)
173 1iy9_A Spermidine synthase; ro 99.3 4.9E-12 1.7E-16 124.0 10.6 109 130-241 74-190 (275)
174 2nxc_A L11 mtase, ribosomal pr 99.3 1E-11 3.6E-16 119.4 12.6 141 112-268 103-245 (254)
175 2i7c_A Spermidine synthase; tr 99.3 1E-11 3.5E-16 122.0 12.7 111 129-241 76-193 (283)
176 1uir_A Polyamine aminopropyltr 99.3 6.5E-12 2.2E-16 125.3 11.4 109 130-240 76-195 (314)
177 3p2e_A 16S rRNA methylase; met 99.3 6.9E-12 2.3E-16 119.3 10.7 105 130-238 23-137 (225)
178 4a6d_A Hydroxyindole O-methylt 99.3 2.7E-11 9.2E-16 122.2 15.6 146 128-282 176-347 (353)
179 4dcm_A Ribosomal RNA large sub 99.3 1.1E-11 3.8E-16 127.1 12.7 114 122-239 213-333 (375)
180 1inl_A Spermidine synthase; be 99.3 6.7E-12 2.3E-16 124.3 10.6 109 130-241 89-206 (296)
181 3m33_A Uncharacterized protein 99.3 3.1E-12 1.1E-16 119.4 7.5 91 130-237 47-139 (226)
182 3dmg_A Probable ribosomal RNA 99.3 1.4E-11 4.9E-16 126.8 12.4 104 130-240 232-340 (381)
183 2pt6_A Spermidine synthase; tr 99.3 1.8E-11 6.1E-16 123.0 12.7 109 130-241 115-231 (321)
184 1ej0_A FTSJ; methyltransferase 99.3 9E-12 3.1E-16 107.6 9.0 99 129-241 20-137 (180)
185 1jg1_A PIMT;, protein-L-isoasp 99.3 1.8E-11 6.1E-16 114.9 11.8 107 124-241 84-190 (235)
186 2avn_A Ubiquinone/menaquinone 99.3 1.4E-11 4.7E-16 117.1 10.8 99 131-241 54-153 (260)
187 3bzb_A Uncharacterized protein 99.3 4.7E-11 1.6E-15 116.4 14.8 107 128-238 76-203 (281)
188 3a27_A TYW2, uncharacterized p 99.3 1.2E-11 4E-16 120.6 10.3 105 128-241 116-220 (272)
189 2b25_A Hypothetical protein; s 99.3 1.8E-11 6.1E-16 121.5 11.8 115 121-241 95-220 (336)
190 1o9g_A RRNA methyltransferase; 99.3 8.3E-12 2.8E-16 118.2 9.0 107 130-238 50-212 (250)
191 2igt_A SAM dependent methyltra 99.3 1.9E-11 6.5E-16 123.5 11.8 106 130-240 152-272 (332)
192 1vlm_A SAM-dependent methyltra 99.3 1.8E-11 6.1E-16 113.3 10.6 94 131-241 47-140 (219)
193 1r18_A Protein-L-isoaspartate( 99.3 1.1E-11 3.7E-16 115.6 9.1 105 129-241 82-195 (227)
194 3iv6_A Putative Zn-dependent a 99.2 3.5E-11 1.2E-15 118.7 12.7 112 123-242 37-150 (261)
195 3sso_A Methyltransferase; macr 99.2 1.2E-11 4E-16 130.3 9.7 99 130-241 215-325 (419)
196 1nv8_A HEMK protein; class I a 99.2 2.6E-11 9E-16 119.3 11.2 106 130-241 122-250 (284)
197 3cc8_A Putative methyltransfer 99.2 2.3E-11 8E-16 110.5 9.8 99 130-241 31-131 (230)
198 4hc4_A Protein arginine N-meth 99.2 3.9E-11 1.3E-15 124.3 12.5 128 107-240 47-189 (376)
199 2zfu_A Nucleomethylin, cerebra 99.2 7.3E-11 2.5E-15 108.1 12.7 123 129-282 65-192 (215)
200 3htx_A HEN1; HEN1, small RNA m 99.2 5.5E-11 1.9E-15 134.3 14.0 118 120-241 710-835 (950)
201 4e2x_A TCAB9; kijanose, tetron 99.2 1.1E-11 3.9E-16 125.8 7.8 128 105-241 77-209 (416)
202 2h00_A Methyltransferase 10 do 99.2 1.5E-11 5.1E-16 116.2 7.6 105 131-238 65-190 (254)
203 2cmg_A Spermidine synthase; tr 99.2 3.4E-11 1.2E-15 117.9 10.0 98 130-240 71-171 (262)
204 2b78_A Hypothetical protein SM 99.2 8.7E-11 3E-15 120.4 13.3 107 130-241 211-332 (385)
205 3lst_A CALO1 methyltransferase 99.2 3.5E-11 1.2E-15 120.1 9.7 109 123-240 176-286 (348)
206 1af7_A Chemotaxis receptor met 99.2 8.6E-11 3E-15 116.5 12.2 111 131-242 105-254 (274)
207 2qm3_A Predicted methyltransfe 99.2 7.7E-11 2.6E-15 119.7 11.9 101 130-236 171-273 (373)
208 3b3j_A Histone-arginine methyl 99.2 7E-11 2.4E-15 125.2 11.8 106 127-238 154-261 (480)
209 2pjd_A Ribosomal RNA small sub 99.2 5.1E-11 1.7E-15 119.3 10.1 113 121-240 186-303 (343)
210 3m6w_A RRNA methylase; rRNA me 99.2 5.4E-11 1.9E-15 126.3 9.9 112 125-240 95-229 (464)
211 2yxl_A PH0851 protein, 450AA l 99.2 1.7E-10 5.8E-15 120.4 13.4 111 126-240 254-389 (450)
212 3k6r_A Putative transferase PH 99.2 1.1E-10 3.8E-15 116.3 11.5 113 117-240 113-225 (278)
213 2plw_A Ribosomal RNA methyltra 99.2 2.5E-10 8.5E-15 103.3 12.5 98 129-241 20-155 (201)
214 1wy7_A Hypothetical protein PH 99.2 1.3E-09 4.5E-14 99.2 17.2 100 129-239 47-148 (207)
215 3m4x_A NOL1/NOP2/SUN family pr 99.2 8.6E-11 2.9E-15 124.5 10.7 112 126-240 100-234 (456)
216 2frx_A Hypothetical protein YE 99.2 1.3E-10 4.6E-15 123.2 12.1 111 127-240 111-246 (479)
217 3giw_A Protein of unknown func 99.1 2.2E-10 7.4E-15 114.9 12.7 107 131-240 78-200 (277)
218 2wk1_A NOVP; transferase, O-me 99.1 1.2E-10 4.1E-15 116.6 10.5 108 130-241 105-245 (282)
219 3c0k_A UPF0064 protein YCCW; P 99.1 1.6E-10 5.4E-15 118.1 11.2 108 130-241 219-340 (396)
220 3tm4_A TRNA (guanine N2-)-meth 99.1 2.2E-10 7.6E-15 116.6 12.1 113 121-238 208-328 (373)
221 2as0_A Hypothetical protein PH 99.1 1.5E-10 5.2E-15 118.0 10.5 108 130-241 216-336 (396)
222 2yx1_A Hypothetical protein MJ 99.1 1.4E-10 4.9E-15 116.5 10.2 99 130-241 194-292 (336)
223 1sqg_A SUN protein, FMU protei 99.1 2.6E-10 8.9E-15 118.0 11.8 110 126-240 241-374 (429)
224 3q87_B N6 adenine specific DNA 99.1 1.5E-10 5.2E-15 104.4 8.2 93 130-240 22-123 (170)
225 3v97_A Ribosomal RNA large sub 99.1 3E-10 1E-14 125.6 11.6 108 130-241 538-658 (703)
226 4dmg_A Putative uncharacterize 99.1 2.7E-10 9.2E-15 118.0 10.0 105 130-241 213-327 (393)
227 1wxx_A TT1595, hypothetical pr 99.1 3.5E-10 1.2E-14 115.2 10.3 105 131-241 209-326 (382)
228 2qfm_A Spermine synthase; sper 99.1 4.5E-10 1.6E-14 116.4 10.8 109 130-241 187-315 (364)
229 4azs_A Methyltransferase WBDD; 99.0 5.1E-10 1.8E-14 120.0 10.9 103 130-238 65-171 (569)
230 1zq9_A Probable dimethyladenos 99.0 5.8E-10 2E-14 109.7 10.4 82 125-213 22-103 (285)
231 3lcv_B Sisomicin-gentamicin re 99.0 5.3E-10 1.8E-14 112.4 10.0 183 37-241 53-237 (281)
232 1ne2_A Hypothetical protein TA 99.0 3.5E-09 1.2E-13 96.3 14.5 99 128-241 48-148 (200)
233 1fp1_D Isoliquiritigenin 2'-O- 99.0 5.5E-10 1.9E-14 112.5 9.8 98 129-240 207-306 (372)
234 2dul_A N(2),N(2)-dimethylguano 99.0 4.7E-10 1.6E-14 115.7 9.2 102 131-240 47-164 (378)
235 2nyu_A Putative ribosomal RNA 99.0 1.2E-09 4E-14 98.2 10.6 98 129-241 20-146 (196)
236 3bt7_A TRNA (uracil-5-)-methyl 99.0 4.9E-10 1.7E-14 113.8 9.1 99 131-241 213-327 (369)
237 3reo_A (ISO)eugenol O-methyltr 99.0 8.5E-10 2.9E-14 111.6 10.6 98 129-240 201-300 (368)
238 2ld4_A Anamorsin; methyltransf 99.0 1.9E-10 6.6E-15 102.7 5.2 90 128-241 9-102 (176)
239 2b9e_A NOL1/NOP2/SUN domain fa 99.0 2.6E-09 8.9E-14 107.3 13.6 134 103-240 73-234 (309)
240 1uwv_A 23S rRNA (uracil-5-)-me 99.0 3.3E-09 1.1E-13 110.2 14.7 146 120-280 275-431 (433)
241 3p9c_A Caffeic acid O-methyltr 99.0 1.2E-09 4.1E-14 110.6 11.0 98 129-240 199-298 (364)
242 3opn_A Putative hemolysin; str 99.0 9.1E-11 3.1E-15 112.7 2.2 99 130-239 36-136 (232)
243 1fp2_A Isoflavone O-methyltran 99.0 8.3E-10 2.8E-14 110.2 9.0 98 129-240 186-288 (352)
244 3frh_A 16S rRNA methylase; met 99.0 2E-09 6.9E-14 106.9 11.3 101 130-240 104-206 (253)
245 3dou_A Ribosomal RNA large sub 99.0 2.3E-09 7.8E-14 99.5 10.8 132 129-280 23-180 (191)
246 2qy6_A UPF0209 protein YFCK; s 99.0 2.5E-09 8.4E-14 105.2 10.7 140 130-280 59-246 (257)
247 3axs_A Probable N(2),N(2)-dime 98.9 1.4E-09 5E-14 113.1 9.2 104 130-240 51-158 (392)
248 2jjq_A Uncharacterized RNA met 98.9 5.8E-09 2E-13 109.0 13.5 98 130-240 289-387 (425)
249 2h1r_A Dimethyladenosine trans 98.9 3.6E-09 1.2E-13 104.9 11.4 80 126-213 37-116 (299)
250 2xyq_A Putative 2'-O-methyl tr 98.9 3.6E-09 1.2E-13 106.1 11.2 133 128-280 60-210 (290)
251 3o4f_A Spermidine synthase; am 98.9 3.8E-09 1.3E-13 106.6 11.1 110 130-241 82-199 (294)
252 2oxt_A Nucleoside-2'-O-methylt 98.9 4.6E-10 1.6E-14 110.2 2.6 104 129-241 72-186 (265)
253 3hp7_A Hemolysin, putative; st 98.9 2.6E-09 8.8E-14 107.4 7.2 97 130-239 84-184 (291)
254 2wa2_A Non-structural protein 98.8 1.4E-09 4.8E-14 107.5 4.7 103 129-240 80-193 (276)
255 2f8l_A Hypothetical protein LM 98.8 1.3E-08 4.5E-13 101.7 11.7 109 130-243 129-259 (344)
256 1zg3_A Isoflavanone 4'-O-methy 98.8 5.2E-09 1.8E-13 104.6 8.2 97 130-240 192-293 (358)
257 2p41_A Type II methyltransfera 98.8 2.9E-09 1E-13 106.5 6.0 103 129-242 80-193 (305)
258 3k0b_A Predicted N6-adenine-sp 98.8 5.2E-08 1.8E-12 100.9 14.4 118 121-241 191-351 (393)
259 2r6z_A UPF0341 protein in RSP 98.8 2.8E-09 9.6E-14 104.3 4.4 88 119-211 71-169 (258)
260 3gru_A Dimethyladenosine trans 98.8 5.1E-08 1.8E-12 97.7 13.1 79 124-210 43-121 (295)
261 3ll7_A Putative methyltransfer 98.7 1E-08 3.5E-13 107.6 7.2 75 130-210 92-170 (410)
262 3ldg_A Putative uncharacterize 98.7 1.2E-07 4.1E-12 98.1 15.0 118 121-241 184-344 (384)
263 3ldu_A Putative methylase; str 98.7 8.1E-08 2.8E-12 99.0 13.2 117 122-241 186-345 (385)
264 1m6y_A S-adenosyl-methyltransf 98.7 2.9E-08 9.9E-13 99.7 9.6 81 128-213 23-108 (301)
265 2ih2_A Modification methylase 98.7 3E-08 1E-12 100.0 9.5 101 130-243 38-167 (421)
266 1qam_A ERMC' methyltransferase 98.6 2.4E-07 8.2E-12 89.0 13.0 70 123-200 22-91 (244)
267 1yub_A Ermam, rRNA methyltrans 98.6 2E-09 6.8E-14 102.6 -2.0 75 126-209 24-99 (245)
268 2oyr_A UPF0341 protein YHIQ; a 98.6 2E-08 6.9E-13 99.0 4.3 110 120-234 75-194 (258)
269 2okc_A Type I restriction enzy 98.6 5.9E-08 2E-12 100.9 7.7 115 126-243 166-310 (445)
270 3c6k_A Spermine synthase; sper 98.6 1.3E-07 4.4E-12 98.7 10.2 108 130-240 204-331 (381)
271 3tqs_A Ribosomal RNA small sub 98.6 1.4E-07 4.9E-12 92.3 9.9 74 124-205 22-99 (255)
272 3fut_A Dimethyladenosine trans 98.5 5.8E-07 2E-11 89.0 11.9 76 125-210 41-117 (271)
273 4gqb_A Protein arginine N-meth 98.4 9.2E-07 3.2E-11 97.5 11.2 103 131-237 357-464 (637)
274 1qyr_A KSGA, high level kasuga 98.4 5.1E-07 1.7E-11 88.2 7.8 65 127-199 17-81 (252)
275 4fzv_A Putative methyltransfer 98.4 9.2E-07 3.1E-11 91.2 9.6 112 127-240 144-284 (359)
276 3ua3_A Protein arginine N-meth 98.3 1.6E-06 5.5E-11 96.8 11.2 105 131-238 409-532 (745)
277 3v97_A Ribosomal RNA large sub 98.3 2.1E-06 7.2E-11 95.1 11.9 119 121-241 180-348 (703)
278 3ftd_A Dimethyladenosine trans 98.3 3.3E-06 1.1E-10 82.0 11.3 106 124-240 24-131 (249)
279 3uzu_A Ribosomal RNA small sub 98.3 2E-06 6.9E-11 85.3 8.9 70 123-199 34-104 (279)
280 2ar0_A M.ecoki, type I restric 98.2 2.1E-06 7.3E-11 92.3 8.6 117 125-243 163-315 (541)
281 2k4m_A TR8_protein, UPF0146 pr 98.1 4.7E-06 1.6E-10 77.4 7.5 87 130-240 34-121 (153)
282 3tos_A CALS11; methyltransfera 97.9 0.00017 5.7E-09 71.6 14.1 138 99-241 37-218 (257)
283 3khk_A Type I restriction-modi 97.8 1.9E-05 6.4E-10 85.3 6.0 108 133-243 246-398 (544)
284 1wg8_A Predicted S-adenosylmet 97.7 5.9E-05 2E-09 76.2 8.5 76 128-213 19-99 (285)
285 3lkd_A Type I restriction-modi 97.7 0.00016 5.4E-09 78.2 12.2 112 130-243 220-361 (542)
286 4auk_A Ribosomal RNA large sub 97.7 6.4E-05 2.2E-09 78.4 8.0 88 129-233 209-296 (375)
287 2h6e_A ADH-4, D-arabinose 1-de 97.6 6.4E-05 2.2E-09 74.7 6.2 101 128-240 168-269 (344)
288 3s2e_A Zinc-containing alcohol 97.6 8.6E-05 2.9E-09 73.5 6.6 101 127-240 162-263 (340)
289 1f8f_A Benzyl alcohol dehydrog 97.5 6E-05 2.1E-09 75.6 5.2 102 126-240 185-289 (371)
290 1pl8_A Human sorbitol dehydrog 97.5 0.00012 4.1E-09 73.2 6.9 97 127-240 167-273 (356)
291 4ej6_A Putative zinc-binding d 97.5 0.0001 3.6E-09 74.4 6.3 102 126-240 177-284 (370)
292 3evf_A RNA-directed RNA polyme 97.5 0.00014 4.7E-09 73.2 6.7 141 129-281 72-227 (277)
293 3s1s_A Restriction endonucleas 97.4 0.00035 1.2E-08 79.4 9.8 110 130-243 320-468 (878)
294 3two_A Mannitol dehydrogenase; 97.4 0.00023 7.8E-09 70.8 7.5 93 128-240 173-265 (348)
295 3vyw_A MNMC2; tRNA wobble urid 97.4 0.00058 2E-08 69.6 10.5 146 130-288 95-267 (308)
296 3m6i_A L-arabinitol 4-dehydrog 97.4 0.00028 9.7E-09 70.4 8.0 100 127-240 175-283 (363)
297 3fpc_A NADP-dependent alcohol 97.4 7.9E-05 2.7E-09 74.2 3.9 101 127-240 162-266 (352)
298 3jv7_A ADH-A; dehydrogenase, n 97.4 0.00017 5.7E-09 71.5 5.7 100 128-240 168-270 (345)
299 1e3j_A NADP(H)-dependent ketos 97.3 0.00046 1.6E-08 68.7 8.3 99 127-240 164-271 (352)
300 1rjw_A ADH-HT, alcohol dehydro 97.3 0.00029 9.8E-09 70.0 6.8 100 128-240 161-261 (339)
301 1pqw_A Polyketide synthase; ro 97.3 0.00015 5E-09 66.0 4.2 98 127-240 34-137 (198)
302 4dvj_A Putative zinc-dependent 97.3 0.00029 9.9E-09 71.0 6.6 95 131-239 171-269 (363)
303 1e3i_A Alcohol dehydrogenase, 97.3 0.00024 8.2E-09 71.4 5.8 99 127-240 191-297 (376)
304 2dph_A Formaldehyde dismutase; 97.3 9E-05 3.1E-09 75.3 2.6 105 127-239 181-298 (398)
305 3uko_A Alcohol dehydrogenase c 97.3 0.00017 5.6E-09 72.7 4.5 103 125-240 187-295 (378)
306 3gcz_A Polyprotein; flavivirus 97.3 0.00027 9.1E-09 71.4 5.9 143 128-281 87-244 (282)
307 1p0f_A NADP-dependent alcohol 97.3 0.00022 7.4E-09 71.6 5.2 101 125-240 185-293 (373)
308 1uuf_A YAHK, zinc-type alcohol 97.2 0.00016 5.5E-09 73.1 4.1 97 128-240 191-288 (369)
309 1cdo_A Alcohol dehydrogenase; 97.2 0.00029 1E-08 70.7 5.8 100 126-240 187-294 (374)
310 1kol_A Formaldehyde dehydrogen 97.2 0.00027 9.1E-09 71.6 5.0 106 127-240 181-300 (398)
311 3fwz_A Inner membrane protein 97.2 0.0017 6E-08 56.6 9.4 96 132-241 7-106 (140)
312 2jhf_A Alcohol dehydrogenase E 97.1 0.00042 1.4E-08 69.6 5.9 100 126-240 186-293 (374)
313 4eez_A Alcohol dehydrogenase 1 97.1 0.00069 2.4E-08 66.8 7.0 102 127-240 159-263 (348)
314 2c0c_A Zinc binding alcohol de 97.1 0.00055 1.9E-08 68.8 6.3 99 125-240 157-261 (362)
315 2fzw_A Alcohol dehydrogenase c 97.1 0.0004 1.4E-08 69.5 5.3 100 126-240 185-292 (373)
316 1vj0_A Alcohol dehydrogenase, 97.1 0.00032 1.1E-08 71.0 4.1 98 127-240 190-298 (380)
317 3fbg_A Putative arginate lyase 97.1 0.00042 1.4E-08 69.0 4.9 94 131-239 150-247 (346)
318 3tka_A Ribosomal RNA small sub 97.0 0.00065 2.2E-08 70.3 6.1 79 128-213 54-138 (347)
319 2zig_A TTHA0409, putative modi 97.0 0.0019 6.4E-08 63.6 8.9 48 130-181 234-281 (297)
320 3ip1_A Alcohol dehydrogenase, 97.0 0.00061 2.1E-08 69.4 5.4 101 128-240 210-318 (404)
321 3qwb_A Probable quinone oxidor 97.0 0.00041 1.4E-08 68.4 3.9 98 127-240 144-247 (334)
322 3uog_A Alcohol dehydrogenase; 97.0 0.00025 8.7E-09 71.1 2.4 99 126-241 184-288 (363)
323 4a2c_A Galactitol-1-phosphate 97.0 0.0011 3.7E-08 65.3 6.8 102 127-240 156-260 (346)
324 3pvc_A TRNA 5-methylaminomethy 96.9 0.00055 1.9E-08 74.6 4.9 131 107-241 27-212 (689)
325 2d8a_A PH0655, probable L-thre 96.9 0.00044 1.5E-08 68.8 3.8 97 127-240 164-267 (348)
326 3c85_A Putative glutathione-re 96.9 0.003 1E-07 56.8 9.0 95 132-240 39-139 (183)
327 2b5w_A Glucose dehydrogenase; 96.9 0.0008 2.7E-08 67.2 5.6 99 128-240 163-273 (357)
328 1piw_A Hypothetical zinc-type 96.9 0.0002 6.8E-09 71.7 1.2 100 127-240 175-276 (360)
329 3goh_A Alcohol dehydrogenase, 96.9 0.00096 3.3E-08 65.3 6.0 93 125-239 136-228 (315)
330 4b7c_A Probable oxidoreductase 96.9 0.00053 1.8E-08 67.6 4.0 105 121-240 139-248 (336)
331 3jyn_A Quinone oxidoreductase; 96.9 0.00044 1.5E-08 68.1 3.3 99 126-240 135-239 (325)
332 2dpo_A L-gulonate 3-dehydrogen 96.9 0.0031 1E-07 63.7 9.4 101 132-240 6-123 (319)
333 3tqh_A Quinone oxidoreductase; 96.8 0.0033 1.1E-07 61.8 9.1 97 125-239 146-244 (321)
334 2vn8_A Reticulon-4-interacting 96.8 0.00076 2.6E-08 67.8 4.7 99 129-240 181-280 (375)
335 4eye_A Probable oxidoreductase 96.8 0.00074 2.5E-08 67.2 4.5 99 125-240 153-257 (342)
336 4dup_A Quinone oxidoreductase; 96.8 0.00075 2.6E-08 67.5 4.3 101 126-240 162-265 (353)
337 2cf5_A Atccad5, CAD, cinnamyl 96.8 0.00083 2.8E-08 67.2 4.6 99 128-240 176-275 (357)
338 3b5i_A S-adenosyl-L-methionine 96.8 0.0058 2E-07 63.4 10.7 109 131-240 52-225 (374)
339 1f0y_A HCDH, L-3-hydroxyacyl-C 96.8 0.0071 2.4E-07 59.1 10.7 100 132-239 15-135 (302)
340 1iz0_A Quinone oxidoreductase; 96.8 0.00083 2.8E-08 65.3 4.0 94 129-240 123-218 (302)
341 2vhw_A Alanine dehydrogenase; 96.7 0.00079 2.7E-08 69.0 4.0 103 130-240 166-268 (377)
342 2dq4_A L-threonine 3-dehydroge 96.7 0.00039 1.3E-08 69.0 1.6 100 126-240 160-262 (343)
343 2hcy_A Alcohol dehydrogenase 1 96.7 0.001 3.5E-08 66.0 4.6 98 128-240 166-269 (347)
344 1v3u_A Leukotriene B4 12- hydr 96.7 0.0013 4.6E-08 64.6 5.1 100 125-240 139-244 (333)
345 2eih_A Alcohol dehydrogenase; 96.7 0.0015 5.2E-08 64.8 5.1 98 127-240 162-265 (343)
346 2g1u_A Hypothetical protein TM 96.6 0.0038 1.3E-07 55.1 7.2 98 130-240 17-118 (155)
347 3gms_A Putative NADPH:quinone 96.6 0.00073 2.5E-08 66.9 2.9 100 125-240 138-243 (340)
348 3ggo_A Prephenate dehydrogenas 96.6 0.0067 2.3E-07 60.6 9.8 91 132-238 33-126 (314)
349 3eld_A Methyltransferase; flav 96.6 0.0021 7.1E-08 65.4 6.1 143 129-281 79-234 (300)
350 1yqd_A Sinapyl alcohol dehydro 96.6 0.0017 5.9E-08 65.3 5.5 99 128-240 183-282 (366)
351 1jvb_A NAD(H)-dependent alcoho 96.6 0.0011 3.9E-08 65.8 4.0 100 127-240 166-271 (347)
352 3gaz_A Alcohol dehydrogenase s 96.6 0.0018 6.3E-08 64.4 5.3 98 126-240 145-246 (343)
353 1lss_A TRK system potassium up 96.6 0.021 7.2E-07 47.9 10.9 96 131-240 3-102 (140)
354 2uyo_A Hypothetical protein ML 96.6 0.028 9.6E-07 56.5 13.7 106 131-240 102-218 (310)
355 2j3h_A NADP-dependent oxidored 96.5 0.0025 8.7E-08 62.8 6.0 101 125-240 149-255 (345)
356 1gu7_A Enoyl-[acyl-carrier-pro 96.5 0.001 3.5E-08 66.3 3.1 104 127-240 162-275 (364)
357 1wly_A CAAR, 2-haloacrylate re 96.5 0.0019 6.6E-08 63.6 5.1 99 126-240 140-244 (333)
358 2efj_A 3,7-dimethylxanthine me 96.5 0.02 6.9E-07 59.7 12.9 105 132-240 53-225 (384)
359 3p8z_A Mtase, non-structural p 96.5 0.0045 1.5E-07 61.8 7.4 104 128-239 75-185 (267)
360 3p2y_A Alanine dehydrogenase/p 96.5 0.00092 3.1E-08 69.8 2.5 100 130-240 182-302 (381)
361 2j8z_A Quinone oxidoreductase; 96.5 0.0016 5.4E-08 65.1 4.1 98 127-240 158-261 (354)
362 3lkz_A Non-structural protein 96.5 0.0079 2.7E-07 61.6 9.1 104 128-239 91-203 (321)
363 1pjc_A Protein (L-alanine dehy 96.4 0.0023 7.9E-08 65.0 4.9 102 131-240 166-267 (361)
364 4dio_A NAD(P) transhydrogenase 96.4 0.0014 4.7E-08 69.0 3.2 100 130-240 188-312 (405)
365 1yb5_A Quinone oxidoreductase; 96.4 0.0031 1.1E-07 63.1 5.5 99 126-240 165-269 (351)
366 2eez_A Alanine dehydrogenase; 96.4 0.0026 8.9E-08 64.7 4.9 103 130-240 164-266 (369)
367 1h2b_A Alcohol dehydrogenase; 96.4 0.0031 1E-07 63.2 5.3 99 127-240 182-285 (359)
368 4e12_A Diketoreductase; oxidor 96.3 0.0095 3.2E-07 58.0 8.4 102 132-240 4-121 (283)
369 3llv_A Exopolyphosphatase-rela 96.3 0.02 7E-07 49.1 9.6 95 132-241 6-104 (141)
370 3nx4_A Putative oxidoreductase 96.3 0.0021 7.1E-08 62.9 3.7 90 134-240 149-241 (324)
371 1qor_A Quinone oxidoreductase; 96.3 0.0018 6.2E-08 63.5 2.9 98 127-240 136-239 (327)
372 2oo3_A Protein involved in cat 96.3 0.0021 7E-08 64.9 3.3 100 136-254 98-203 (283)
373 3r24_A NSP16, 2'-O-methyl tran 96.3 0.025 8.7E-07 58.1 11.3 143 129-292 107-267 (344)
374 3mog_A Probable 3-hydroxybutyr 96.2 0.013 4.5E-07 62.4 9.6 100 132-240 5-120 (483)
375 2cdc_A Glucose dehydrogenase g 96.2 0.0099 3.4E-07 59.5 7.9 93 132-240 181-278 (366)
376 2px2_A Genome polyprotein [con 96.2 0.025 8.6E-07 56.8 10.7 106 129-243 71-186 (269)
377 3gqv_A Enoyl reductase; medium 96.2 0.0074 2.5E-07 60.8 7.0 97 130-240 163-263 (371)
378 3krt_A Crotonyl COA reductase; 96.2 0.0026 9E-08 65.9 3.7 100 127-240 224-344 (456)
379 1zsy_A Mitochondrial 2-enoyl t 96.2 0.0065 2.2E-07 60.6 6.4 101 125-239 161-269 (357)
380 1i4w_A Mitochondrial replicati 96.1 0.01 3.5E-07 61.1 7.9 61 131-198 58-118 (353)
381 3ce6_A Adenosylhomocysteinase; 96.1 0.007 2.4E-07 65.0 6.9 89 129-239 271-360 (494)
382 1l7d_A Nicotinamide nucleotide 96.1 0.0027 9.2E-08 65.0 3.5 99 131-240 171-294 (384)
383 1m6e_X S-adenosyl-L-methionnin 96.1 0.0072 2.5E-07 62.5 6.5 110 130-240 50-209 (359)
384 2f1k_A Prephenate dehydrogenas 96.1 0.03 1E-06 53.5 10.4 89 133-238 1-89 (279)
385 4a0s_A Octenoyl-COA reductase/ 96.1 0.0043 1.5E-07 63.8 4.8 100 127-240 216-336 (447)
386 1x13_A NAD(P) transhydrogenase 96.1 0.002 6.8E-08 66.9 2.3 98 131-240 171-292 (401)
387 2zb4_A Prostaglandin reductase 96.1 0.0059 2E-07 60.7 5.6 101 125-240 152-260 (357)
388 2ew2_A 2-dehydropantoate 2-red 96.1 0.042 1.4E-06 52.5 11.3 95 133-240 4-108 (316)
389 3k6j_A Protein F01G10.3, confi 96.0 0.03 1E-06 59.7 11.1 101 131-240 53-166 (460)
390 1xa0_A Putative NADPH dependen 96.0 0.0037 1.3E-07 61.3 3.9 98 128-240 145-246 (328)
391 3gg2_A Sugar dehydrogenase, UD 96.0 0.019 6.6E-07 60.3 9.4 100 133-240 3-122 (450)
392 1ldn_A L-lactate dehydrogenase 96.0 0.065 2.2E-06 53.5 12.7 105 130-239 4-122 (316)
393 2g5c_A Prephenate dehydrogenas 95.9 0.028 9.5E-07 53.9 9.4 90 133-238 2-94 (281)
394 3l9w_A Glutathione-regulated p 95.9 0.02 6.8E-07 59.7 9.0 96 131-240 3-102 (413)
395 1zcj_A Peroxisomal bifunctiona 95.9 0.051 1.7E-06 57.2 12.1 100 132-241 37-150 (463)
396 1id1_A Putative potassium chan 95.9 0.05 1.7E-06 47.6 10.0 99 132-241 3-106 (153)
397 1lld_A L-lactate dehydrogenase 95.8 0.034 1.1E-06 54.4 9.5 100 131-238 6-122 (319)
398 3b1f_A Putative prephenate deh 95.8 0.038 1.3E-06 53.2 9.6 91 132-237 6-98 (290)
399 3ps9_A TRNA 5-methylaminomethy 95.7 0.029 1E-06 60.8 9.7 134 107-241 35-220 (676)
400 3c24_A Putative oxidoreductase 95.7 0.03 1E-06 54.1 8.8 86 133-238 12-99 (286)
401 2v6b_A L-LDH, L-lactate dehydr 95.7 0.062 2.1E-06 53.3 11.3 98 133-238 1-114 (304)
402 3ufb_A Type I restriction-modi 95.7 0.064 2.2E-06 57.6 12.2 116 126-243 212-365 (530)
403 1tt7_A YHFP; alcohol dehydroge 95.7 0.0042 1.5E-07 60.9 2.7 97 128-240 146-247 (330)
404 1ez4_A Lactate dehydrogenase; 95.6 0.072 2.5E-06 53.6 11.3 102 130-239 3-120 (318)
405 1mv8_A GMD, GDP-mannose 6-dehy 95.6 0.037 1.3E-06 57.4 9.3 100 133-240 1-123 (436)
406 3pi7_A NADH oxidoreductase; gr 95.6 0.0039 1.4E-07 61.9 1.9 96 131-240 163-263 (349)
407 2y0c_A BCEC, UDP-glucose dehyd 95.5 0.019 6.6E-07 60.8 7.1 103 130-240 6-128 (478)
408 1g60_A Adenine-specific methyl 95.5 0.027 9.3E-07 54.3 7.6 48 130-181 211-258 (260)
409 3l4b_C TRKA K+ channel protien 95.5 0.052 1.8E-06 50.3 9.2 95 133-240 1-99 (218)
410 1y6j_A L-lactate dehydrogenase 95.5 0.033 1.1E-06 55.8 8.4 103 131-239 6-122 (318)
411 4a27_A Synaptic vesicle membra 95.5 0.0065 2.2E-07 60.4 3.2 100 125-240 136-238 (349)
412 4e21_A 6-phosphogluconate dehy 95.4 0.022 7.6E-07 58.3 6.9 93 131-239 21-114 (358)
413 2zqz_A L-LDH, L-lactate dehydr 95.4 0.081 2.8E-06 53.4 10.8 105 130-239 7-124 (326)
414 3d4o_A Dipicolinate synthase s 95.3 0.052 1.8E-06 53.2 9.0 90 130-238 153-242 (293)
415 1zej_A HBD-9, 3-hydroxyacyl-CO 95.3 0.033 1.1E-06 55.7 7.6 97 130-240 10-107 (293)
416 2rir_A Dipicolinate synthase, 95.3 0.046 1.6E-06 53.7 8.5 90 130-238 155-244 (300)
417 2xxj_A L-LDH, L-lactate dehydr 95.2 0.086 2.9E-06 52.7 10.3 102 133-239 1-115 (310)
418 4a7p_A UDP-glucose dehydrogena 95.2 0.024 8.4E-07 59.8 6.6 104 131-241 7-130 (446)
419 2aef_A Calcium-gated potassium 95.2 0.079 2.7E-06 49.4 9.3 96 130-241 7-106 (234)
420 2cvz_A Dehydrogenase, 3-hydrox 95.2 0.054 1.9E-06 51.6 8.3 88 133-239 2-89 (289)
421 3ado_A Lambda-crystallin; L-gu 95.1 0.09 3.1E-06 53.4 10.0 103 131-241 5-124 (319)
422 1rjd_A PPM1P, carboxy methyl t 95.1 0.11 3.8E-06 52.8 10.7 105 130-238 96-230 (334)
423 3k96_A Glycerol-3-phosphate de 95.0 0.06 2.1E-06 54.9 8.7 98 132-239 29-132 (356)
424 3d0o_A L-LDH 1, L-lactate dehy 95.0 0.11 3.6E-06 52.1 10.2 104 131-239 5-122 (317)
425 2hmt_A YUAA protein; RCK, KTN, 94.9 0.048 1.6E-06 45.8 6.3 95 132-240 6-104 (144)
426 4ezb_A Uncharacterized conserv 94.9 0.066 2.3E-06 53.2 8.3 92 132-240 24-121 (317)
427 1bg6_A N-(1-D-carboxylethyl)-L 94.9 0.086 2.9E-06 51.7 9.0 99 132-239 4-108 (359)
428 3g79_A NDP-N-acetyl-D-galactos 94.8 0.1 3.5E-06 55.7 10.1 104 130-240 16-147 (478)
429 2vz8_A Fatty acid synthase; tr 94.8 0.012 4.2E-07 73.5 3.4 105 130-240 1239-1348(2512)
430 2h78_A Hibadh, 3-hydroxyisobut 94.7 0.075 2.6E-06 51.5 7.9 90 133-240 4-97 (302)
431 2wtb_A MFP2, fatty acid multif 94.7 0.091 3.1E-06 58.6 9.5 99 133-240 313-427 (725)
432 3hwr_A 2-dehydropantoate 2-red 94.6 0.12 4.1E-06 51.1 9.4 101 131-244 18-123 (318)
433 1t2d_A LDH-P, L-lactate dehydr 94.6 0.17 5.8E-06 50.9 10.6 100 131-239 3-125 (322)
434 3ktd_A Prephenate dehydrogenas 94.6 0.036 1.2E-06 56.6 5.7 89 132-236 8-97 (341)
435 3g0o_A 3-hydroxyisobutyrate de 94.6 0.054 1.9E-06 53.0 6.7 92 132-240 7-102 (303)
436 1a5z_A L-lactate dehydrogenase 94.6 0.19 6.6E-06 50.0 10.8 98 133-238 1-114 (319)
437 1wdk_A Fatty oxidation complex 94.6 0.063 2.2E-06 59.7 8.0 102 130-240 312-429 (715)
438 3pid_A UDP-glucose 6-dehydroge 94.5 0.091 3.1E-06 55.5 8.6 101 130-241 34-154 (432)
439 1hyh_A L-hicdh, L-2-hydroxyiso 94.5 0.21 7.1E-06 49.2 10.7 99 133-238 2-120 (309)
440 3ic5_A Putative saccharopine d 94.4 0.19 6.6E-06 40.7 8.6 71 131-212 4-78 (118)
441 1vpd_A Tartronate semialdehyde 94.3 0.066 2.3E-06 51.5 6.6 90 133-239 6-98 (299)
442 4dll_A 2-hydroxy-3-oxopropiona 94.3 0.12 4E-06 51.3 8.6 92 131-240 30-124 (320)
443 2qyt_A 2-dehydropantoate 2-red 94.3 0.042 1.4E-06 53.0 5.2 94 131-239 7-116 (317)
444 3d1l_A Putative NADP oxidoredu 94.3 0.11 3.8E-06 49.3 8.0 91 132-240 10-102 (266)
445 4gwg_A 6-phosphogluconate dehy 94.3 0.09 3.1E-06 56.2 8.1 98 132-239 4-102 (484)
446 2zyd_A 6-phosphogluconate dehy 94.3 0.095 3.2E-06 55.6 8.2 97 131-238 14-111 (480)
447 2hjr_A Malate dehydrogenase; m 94.2 0.21 7.3E-06 50.2 10.3 100 131-239 13-130 (328)
448 3hn2_A 2-dehydropantoate 2-red 94.2 0.053 1.8E-06 53.4 5.7 98 133-244 3-106 (312)
449 3gt0_A Pyrroline-5-carboxylate 94.2 0.024 8.2E-07 53.8 3.1 92 133-239 3-96 (247)
450 2iz1_A 6-phosphogluconate dehy 94.2 0.11 3.8E-06 54.7 8.5 95 133-238 6-101 (474)
451 3tri_A Pyrroline-5-carboxylate 94.1 0.1 3.5E-06 50.9 7.7 92 132-238 3-96 (280)
452 3gvp_A Adenosylhomocysteinase 94.1 0.076 2.6E-06 56.5 7.1 112 109-243 196-309 (435)
453 2o3j_A UDP-glucose 6-dehydroge 94.0 0.12 4.1E-06 54.6 8.3 102 133-240 10-135 (481)
454 3qha_A Putative oxidoreductase 93.9 0.097 3.3E-06 51.2 7.0 90 132-240 15-105 (296)
455 3lk7_A UDP-N-acetylmuramoylala 93.9 0.35 1.2E-05 50.3 11.6 75 131-214 8-83 (451)
456 3cky_A 2-hydroxymethyl glutara 93.9 0.094 3.2E-06 50.5 6.8 91 131-239 3-97 (301)
457 3pef_A 6-phosphogluconate dehy 93.9 0.052 1.8E-06 52.5 4.9 90 133-240 2-95 (287)
458 1x0v_A GPD-C, GPDH-C, glycerol 93.8 0.084 2.9E-06 52.1 6.4 101 132-243 8-126 (354)
459 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.8 0.11 3.9E-06 54.8 7.8 97 133-238 2-101 (478)
460 3pqe_A L-LDH, L-lactate dehydr 93.8 0.51 1.7E-05 47.8 12.2 80 130-213 3-83 (326)
461 2ewd_A Lactate dehydrogenase,; 93.8 0.28 9.7E-06 48.5 10.1 100 131-239 3-120 (317)
462 3vku_A L-LDH, L-lactate dehydr 93.7 0.28 9.7E-06 49.8 10.2 79 130-213 7-86 (326)
463 1dlj_A UDP-glucose dehydrogena 93.7 0.16 5.5E-06 52.2 8.4 97 133-241 1-118 (402)
464 1pzg_A LDH, lactate dehydrogen 93.5 0.2 6.8E-06 50.5 8.6 101 131-239 8-131 (331)
465 3c7a_A Octopine dehydrogenase; 93.5 0.094 3.2E-06 53.1 6.3 95 133-238 3-114 (404)
466 3ojo_A CAP5O; rossmann fold, c 93.5 0.34 1.2E-05 51.1 10.6 100 130-241 9-130 (431)
467 1txg_A Glycerol-3-phosphate de 93.4 0.12 4.2E-06 50.2 6.7 92 133-238 1-102 (335)
468 1np3_A Ketol-acid reductoisome 93.4 0.12 4.1E-06 51.9 6.8 93 132-245 16-110 (338)
469 3n58_A Adenosylhomocysteinase; 93.4 0.11 3.8E-06 55.7 6.7 113 109-243 223-336 (464)
470 1evy_A Glycerol-3-phosphate de 93.3 0.17 5.9E-06 50.4 7.7 96 134-239 17-123 (366)
471 2q3e_A UDP-glucose 6-dehydroge 93.3 0.14 4.9E-06 53.6 7.4 101 133-240 6-131 (467)
472 3iup_A Putative NADPH:quinone 93.2 0.016 5.5E-07 58.6 0.1 100 130-238 169-274 (379)
473 1ks9_A KPA reductase;, 2-dehyd 93.2 0.044 1.5E-06 51.9 3.1 92 133-239 1-96 (291)
474 2p4q_A 6-phosphogluconate dehy 93.2 0.16 5.6E-06 54.1 7.7 97 132-239 10-108 (497)
475 2i6t_A Ubiquitin-conjugating e 93.1 0.38 1.3E-05 48.1 9.9 100 130-239 12-124 (303)
476 2pv7_A T-protein [includes: ch 93.0 0.12 4E-06 50.8 5.9 75 133-238 22-97 (298)
477 2py6_A Methyltransferase FKBM; 93.0 0.17 5.9E-06 52.3 7.5 67 128-195 223-292 (409)
478 1oju_A MDH, malate dehydrogena 93.0 0.56 1.9E-05 46.8 10.8 103 133-240 1-118 (294)
479 2pgd_A 6-phosphogluconate dehy 93.0 0.16 5.5E-06 53.6 7.2 96 133-238 3-99 (482)
480 3i83_A 2-dehydropantoate 2-red 92.9 0.13 4.5E-06 50.7 6.2 99 133-244 3-108 (320)
481 3zwc_A Peroxisomal bifunctiona 92.9 0.47 1.6E-05 53.3 11.2 100 133-240 317-429 (742)
482 3pdu_A 3-hydroxyisobutyrate de 92.9 0.092 3.1E-06 50.7 4.8 90 133-240 2-95 (287)
483 1yj8_A Glycerol-3-phosphate de 92.8 0.098 3.4E-06 52.7 5.1 96 133-238 22-139 (375)
484 3ghy_A Ketopantoate reductase 92.7 0.063 2.2E-06 53.3 3.6 95 132-238 3-102 (335)
485 2izz_A Pyrroline-5-carboxylate 92.7 0.15 5.3E-06 50.4 6.3 89 131-238 21-116 (322)
486 1g55_A DNA cytosine methyltran 92.5 0.3 1E-05 49.3 8.3 72 132-211 2-76 (343)
487 1guz_A Malate dehydrogenase; o 92.5 0.62 2.1E-05 46.2 10.4 100 133-239 1-117 (310)
488 3h9u_A Adenosylhomocysteinase; 92.4 0.19 6.4E-06 53.5 6.9 112 109-243 187-300 (436)
489 1mld_A Malate dehydrogenase; o 92.4 0.53 1.8E-05 47.0 9.8 99 133-239 1-116 (314)
490 2raf_A Putative dinucleotide-b 92.4 0.23 7.8E-06 46.3 6.6 76 131-244 18-93 (209)
491 3oj0_A Glutr, glutamyl-tRNA re 92.3 0.033 1.1E-06 48.4 0.8 88 131-238 20-108 (144)
492 3ond_A Adenosylhomocysteinase; 92.3 0.35 1.2E-05 52.1 8.8 108 109-238 241-350 (488)
493 1u8x_X Maltose-6'-phosphate gl 92.3 0.37 1.3E-05 51.4 8.9 79 132-214 28-113 (472)
494 3qsg_A NAD-binding phosphogluc 92.3 0.22 7.5E-06 49.2 6.7 90 132-240 24-117 (312)
495 3cea_A MYO-inositol 2-dehydrog 92.3 0.51 1.8E-05 46.3 9.3 95 130-239 6-101 (346)
496 3vtf_A UDP-glucose 6-dehydroge 92.2 0.22 7.5E-06 52.9 7.0 102 132-241 21-145 (444)
497 2g76_A 3-PGDH, D-3-phosphoglyc 92.1 0.11 3.9E-06 52.8 4.5 90 130-238 163-253 (335)
498 2vz8_A Fatty acid synthase; tr 91.9 0.13 4.6E-06 64.5 5.8 103 127-240 1663-1770(2512)
499 1wwk_A Phosphoglycerate dehydr 91.9 0.08 2.7E-06 52.9 3.1 91 130-239 140-231 (307)
500 3doj_A AT3G25530, dehydrogenas 91.9 0.11 3.7E-06 51.1 4.0 93 130-240 19-115 (310)
No 1
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=100.00 E-value=1.9e-48 Score=392.80 Aligned_cols=252 Identities=21% Similarity=0.337 Sum_probs=231.8
Q ss_pred HHHHHHHHHHHHHccCCCCCCchhHHHHHHHHHHh---hc----CCcchhhhcCChHHHHHHHHHHHHHHHHhHhhhhHH
Q 041205 17 FLIARIMQIHASISKLESLRPSKQVNILFSHLVKL---CI----LPSSIDIKALPQEVQQMRQSLIILCARAESLLELEF 89 (535)
Q Consensus 17 ~LI~~I~~ly~~Is~L~sL~PS~~VNaLFt~LV~l---C~----~~~~~dv~~l~~~vq~l~~~Lr~lca~AE~~LE~h~ 89 (535)
....+|.++|+.|+++++|+|++.||+||+.|.++ |. .....+.+.-+|+++++++.+|+.|+.|+..+|.+|
T Consensus 5 ~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~vl~~~~~~~l~~~~~~~y~~~~~~~E~~w 84 (298)
T 3fpf_A 5 IYWDKIKRIASRLEGMNYHFDEMDTSGVMPLLDEIEEIAHDSTIDFESAKHILDDAEMNHALSLIRKFYVNLGMKLEMEK 84 (298)
T ss_dssp HHHHHHHHHHHHHGGGTTCGGGCCTTTTHHHHHHHHHHHTCTTSCHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCccccHHHHHHHHHHHHHhcccCCcCHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999966665 43 333455566789999999999999999999999999
Q ss_pred HhHhhccCCCccccccCccchhhHHhHHHHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhH
Q 041205 90 ATYLSKISLPLNDLNRFPYYENYVKLAKLEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETA 169 (535)
Q Consensus 90 A~~Lls~~~pl~~L~~FpYy~NYv~LirlE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeA 169 (535)
|++|+++++||++|..||||+||+++++.|+.+ +.+.++++||||||||+|+|++++|+ .+|++|+|||+|+++
T Consensus 85 a~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~l----a~l~~g~rVLDIGcG~G~~ta~~lA~--~~ga~V~gIDis~~~ 158 (298)
T 3fpf_A 85 AQEVIESDSPWETLRSFYFYPRYLELLKNEAAL----GRFRRGERAVFIGGGPLPLTGILLSH--VYGMRVNVVEIEPDI 158 (298)
T ss_dssp HHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHH----TTCCTTCEEEEECCCSSCHHHHHHHH--TTCCEEEEEESSHHH
T ss_pred HHHHhccCChHHhhccCCCcccHHHHHHHHHHH----cCCCCcCEEEEECCCccHHHHHHHHH--ccCCEEEEEECCHHH
Confidence 999999999999999999999999999999853 46789999999999999999999988 579999999999999
Q ss_pred HHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcccccccccC
Q 041205 170 NNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGARAFLY 249 (535)
Q Consensus 170 IelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLY 249 (535)
++.||+++++.| + ++|+|++||+.+++ .+.||+||+++.+ ++|.++++++.++|||||+|++++++|++.++|
T Consensus 159 l~~Ar~~~~~~g-l-~~v~~v~gDa~~l~--d~~FDvV~~~a~~---~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~ 231 (298)
T 3fpf_A 159 AELSRKVIEGLG-V-DGVNVITGDETVID--GLEFDVLMVAALA---EPKRRVFRNIHRYVDTETRIIYRTYTGMRAILY 231 (298)
T ss_dssp HHHHHHHHHHHT-C-CSEEEEESCGGGGG--GCCCSEEEECTTC---SCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSS
T ss_pred HHHHHHHHHhcC-C-CCeEEEECchhhCC--CCCcCEEEECCCc---cCHHHHHHHHHHHcCCCcEEEEEcCcchhhhcc
Confidence 999999999999 6 89999999999865 4679999998776 799999999999999999999999999999999
Q ss_pred CCCcc-ccCCcEEEEEEcCCCcceeeeEEEecC
Q 041205 250 PVVEH-ELFDFKVLSIFHPTNDVINSVVLLQLP 281 (535)
Q Consensus 250 P~Vdp-dl~GFeil~v~hP~~eVINSVVvARK~ 281 (535)
|.+++ +..||+.+.+.||.++|+|+||++||.
T Consensus 232 ~~v~~~~~~gf~~~~~~~p~~~v~N~vv~a~k~ 264 (298)
T 3fpf_A 232 APVSDDDITGFRRAGVVLPSGKVNNTSVLVFKC 264 (298)
T ss_dssp CCCCTGGGTTEEEEEEECCCTTCCCEEEEEEEC
T ss_pred ccCChhhhhhhhheeEECCCCCcCcEEEEEEcc
Confidence 99999 789999999999999999999999995
No 2
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.71 E-value=9.5e-18 Score=159.20 Aligned_cols=104 Identities=14% Similarity=0.269 Sum_probs=93.0
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcC-CCeEEEEccccccccCC--CCcceEEe
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIE-KRMKFLTCDIMEVKEKL--GEYDCIIL 209 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls-~rI~Fi~GDA~el~~dL--~~FDvVfi 209 (535)
.+||||||| .|+++++||++..++++|++||+|+++++.|++++++.| +. ++|+|++||+.+....+ +.||+||+
T Consensus 58 ~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 58 TGAIAITPA-AGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG-YSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CEEEEESTT-HHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT-CCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCEEEEcCC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 399999999 599999999954468999999999999999999999999 77 79999999998876554 57999999
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
++.. .++..+++.+.+.|+|||+|++.+.
T Consensus 136 d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 136 QVSP---MDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp CCCT---TTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred cCcH---HHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 9776 5788899999999999999999885
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.70 E-value=8e-17 Score=157.10 Aligned_cols=125 Identities=15% Similarity=0.193 Sum_probs=99.2
Q ss_pred ccchhhHHhHHHHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhc-CCCcEEEEEeCChhHHHHHHHHHhhcCCcCC
Q 041205 107 PYYENYVKLAKLEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQH-MKSTHFDNIDIDETANNLARRIVSSDDEIEK 185 (535)
Q Consensus 107 pYy~NYv~LirlE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~-l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~ 185 (535)
|+|+....++.. ++..+ +.++.+|||||||+ |..++.+|++. .+|++|+|||+|++|++.||+.+...| ...
T Consensus 51 P~Y~~~~~~i~~---l~~~~--~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~-~~~ 123 (261)
T 4gek_A 51 PGYSNIISMIGM---LAERF--VQPGTQVYDLGCSL-GAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK-APT 123 (261)
T ss_dssp TTHHHHHHHHHH---HHHHH--CCTTCEEEEETCTT-THHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC-CSS
T ss_pred CCHHHHHHHHHH---HHHHh--CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc-cCc
Confidence 676655444432 22222 36899999999996 67777888743 368899999999999999999999988 678
Q ss_pred CeEEEEccccccccCCCCcceEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 186 RMKFLTCDIMEVKEKLGEYDCIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 186 rI~Fi~GDA~el~~dL~~FDvVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|+|+++|+.+++. .+||+|++....+. .+++..+|++++++|||||+|++.+
T Consensus 124 ~v~~~~~D~~~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 124 PVDVIEGDIRDIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp CEEEEESCTTTCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEeecccccccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 99999999987654 57999997655543 5677899999999999999999864
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.70 E-value=1.5e-16 Score=145.74 Aligned_cols=155 Identities=17% Similarity=0.099 Sum_probs=114.6
Q ss_pred HHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC
Q 041205 122 ALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL 201 (535)
Q Consensus 122 lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL 201 (535)
.+.....+.++.+|||||||+ |..+..+++...++.+|+|+|+|+++++.|++.+...| + .+++|+++|+.+++...
T Consensus 28 ~~~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 28 KVLKEFGLKEGMTVLDVGTGA-GFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG-L-KNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHTCCTTCEEEESSCTT-CTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT-C-TTEEEEECBTTBCSSCS
T ss_pred HHHHHhCCCCCCEEEEEecCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEecccccCCCCC
Confidence 334445567889999999996 66667777744467899999999999999999999988 5 48999999998877666
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEccccccccc----CCCCcc-------ccCCcEEEEEEcCCCc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGARAFL----YPVVEH-------ELFDFKVLSIFHPTND 270 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fL----YP~Vdp-------dl~GFeil~v~hP~~e 270 (535)
+.||+|++....+..++...+++++.+.|+|||.+++.+........ ....+. .-.||++..+..-.+
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~- 183 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGK- 183 (219)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETT-
T ss_pred CCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCC-
Confidence 77999998766644578899999999999999999997632111111 111111 127999877655333
Q ss_pred ceeeeEEEecC
Q 041205 271 VINSVVLLQLP 281 (535)
Q Consensus 271 VINSVVvARK~ 281 (535)
. ..++++||+
T Consensus 184 ~-~~~~~~~k~ 193 (219)
T 3dh0_A 184 Y-CFGVYAMIV 193 (219)
T ss_dssp T-EEEEEEECC
T ss_pred c-eEEEEEEec
Confidence 2 347778875
No 5
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.69 E-value=1.1e-16 Score=150.99 Aligned_cols=108 Identities=19% Similarity=0.295 Sum_probs=94.9
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc-C-CCCcc
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE-K-LGEYD 205 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~-d-L~~FD 205 (535)
...++++|||||||+ |++++++|+ ..++++|++||+|+++++.|++.++..| +.++|+|+++|+.+... . .+.||
T Consensus 68 ~~~~~~~vLDiG~G~-G~~~~~la~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~fD 144 (232)
T 3ntv_A 68 RMNNVKNILEIGTAI-GYSSMQFAS-ISDDIHVTTIERNETMIQYAKQNLATYH-FENQVRIIEGNALEQFENVNDKVYD 144 (232)
T ss_dssp HHHTCCEEEEECCSS-SHHHHHHHT-TCTTCEEEEEECCHHHHHHHHHHHHHTT-CTTTEEEEESCGGGCHHHHTTSCEE
T ss_pred hhcCCCEEEEEeCch-hHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECCHHHHHHhhccCCcc
Confidence 345789999999995 888899998 5779999999999999999999999999 77899999999987544 2 35799
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+||+++.. ..+..+++.+.+.|+|||+|++.+.
T Consensus 145 ~V~~~~~~---~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 145 MIFIDAAK---AQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp EEEEETTS---SSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred EEEEcCcH---HHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 99998766 5788999999999999999999875
No 6
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.68 E-value=2.8e-17 Score=157.70 Aligned_cols=109 Identities=14% Similarity=0.143 Sum_probs=95.9
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC------C
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK------L 201 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d------L 201 (535)
...++++|||||||+ |+++++||+...++++|++||+++++++.|+++++..| +.++|+|++||+.+.... .
T Consensus 57 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~gda~~~l~~~~~~~~~ 134 (242)
T 3r3h_A 57 RLTRAKKVLELGTFT-GYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK-QEHKIKLRLGPALDTLHSLLNEGGE 134 (242)
T ss_dssp HHHTCSEEEEEESCC-SHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT-CTTTEEEEESCHHHHHHHHHHHHCS
T ss_pred hhcCcCEEEEeeCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHHHhhccCC
Confidence 345789999999995 89999999843348999999999999999999999999 788999999999876554 3
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.||+||+++.. .++..+++.+.++|+|||+|++.+.
T Consensus 135 ~~fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 135 HQFDFIFIDADK---TNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp SCEEEEEEESCG---GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CCEeEEEEcCCh---HHhHHHHHHHHHhcCCCeEEEEECC
Confidence 679999999776 6889999999999999999999885
No 7
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.67 E-value=1.3e-16 Score=147.56 Aligned_cols=107 Identities=14% Similarity=0.255 Sum_probs=93.2
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCC-CcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC-----C
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMK-STHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL-----G 202 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~-Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL-----~ 202 (535)
..++.+|||||||+ |++++++|++ ++ +++|+++|+++++++.|++++...| +.++++|+++|+.+....+ +
T Consensus 56 ~~~~~~vLdiG~G~-G~~~~~la~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~ 132 (223)
T 3duw_A 56 IQGARNILEIGTLG-GYSTIWLARG-LSSGGRVVTLEASEKHADIARSNIERAN-LNDRVEVRTGLALDSLQQIENEKYE 132 (223)
T ss_dssp HHTCSEEEEECCTT-SHHHHHHHTT-CCSSCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCHHHHHHHHHHTTCC
T ss_pred hhCCCEEEEecCCc-cHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHHHHhcCCC
Confidence 35789999999995 7888999984 44 8999999999999999999999999 7788999999997654322 4
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.||+||+++.. +....+++.+.++|+|||+|++.+.
T Consensus 133 ~fD~v~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 133 PFDFIFIDADK---QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp CCSEEEECSCG---GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred CcCEEEEcCCc---HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 69999998765 6889999999999999999999875
No 8
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.66 E-value=2.6e-16 Score=150.48 Aligned_cols=107 Identities=16% Similarity=0.291 Sum_probs=93.7
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCC-CcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC---CCc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMK-STHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL---GEY 204 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~-Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL---~~F 204 (535)
..++++|||||||+ |++++.+|+. ++ +++|++||+|+++++.|++++++.| +.++|+|+++|+.+....+ +.|
T Consensus 61 ~~~~~~VLdiG~G~-G~~~~~la~~-~~~~~~v~~vD~s~~~~~~a~~~~~~~g-~~~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 61 LTQAKRILEIGTLG-GYSTIWMARE-LPADGQLLTLEADAHHAQVARENLQLAG-VDQRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp HHTCSEEEEECCTT-SHHHHHHHTT-SCTTCEEEEEECCHHHHHHHHHHHHHTT-CTTTEEEEESCHHHHHHTCCSCCCC
T ss_pred hcCCCEEEEecCCc-hHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHhcCCCCCe
Confidence 45789999999995 8888999984 44 8999999999999999999999999 7789999999998754432 369
Q ss_pred ceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 205 DCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 205 DvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
|+||+++.. +++..+++.+.+.|+|||+|++.+.
T Consensus 138 D~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 138 DLIFIDADK---PNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp SEEEECSCG---GGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEEEECCch---HHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 999998765 6889999999999999999999885
No 9
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.66 E-value=1.9e-16 Score=149.78 Aligned_cols=108 Identities=16% Similarity=0.233 Sum_probs=93.4
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC------C
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL------G 202 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL------~ 202 (535)
..++++||||||| .|++++++|+...++++|+++|+|+++++.|+++++..| +.++|+|+++|+.+....+ +
T Consensus 70 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~~d~~~~l~~l~~~~~~~ 147 (232)
T 3cbg_A 70 LTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG-VAEKISLRLGPALATLEQLTQGKPLP 147 (232)
T ss_dssp HHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESCHHHHHHHHHTSSSCC
T ss_pred hcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 3568999999999 589999999843337899999999999999999999999 7778999999987643322 5
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.||+||+++.. +++..+++.+.+.|+|||+|++.+.
T Consensus 148 ~fD~V~~d~~~---~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 148 EFDLIFIDADK---RNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp CEEEEEECSCG---GGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred CcCEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 79999998765 6899999999999999999999885
No 10
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.66 E-value=4.6e-16 Score=148.08 Aligned_cols=108 Identities=20% Similarity=0.279 Sum_probs=94.6
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC-------C
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK-------L 201 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d-------L 201 (535)
..++++||||||| .|++++++|+.+.++++|+++|+|+++++.|++++++.| +.++|+|+++|+.+.... .
T Consensus 68 ~~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 68 LVNAKKTIEVGVF-TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG-VEHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp HTTCCEEEEECCT-TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hhCCCEEEEeCCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHHHHhccCCC
Confidence 3578999999999 589999999953348999999999999999999999999 777899999999875432 3
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.||+||+++.. .++..+++.+.+.|+|||+|++.+.
T Consensus 146 ~~fD~I~~d~~~---~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 146 GSYDFGFVDADK---PNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp TCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CCcCEEEECCch---HHHHHHHHHHHHhcCCCeEEEEecC
Confidence 579999999766 6899999999999999999999885
No 11
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.66 E-value=4.6e-16 Score=149.68 Aligned_cols=108 Identities=16% Similarity=0.236 Sum_probs=94.6
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC-------C
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK-------L 201 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d-------L 201 (535)
..++++||||||| .|++++++|+.+.++++|++||+|+++++.|++++++.| +.++|+|+++|+.+.... .
T Consensus 77 ~~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g-~~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 77 LINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG-VDHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp HTTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT-CGGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hhCcCEEEEeCCC-cCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCeEEEECCHHHHHHHHHhccCCC
Confidence 3578999999999 599999999953348999999999999999999999999 778999999999875432 3
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.||+||+++.+ .++..+++.+.++|+|||+|++.+.
T Consensus 155 ~~fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 155 GSYDFIFVDADK---DNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp TCBSEEEECSCS---TTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred CCEEEEEEcCch---HHHHHHHHHHHHhCCCCeEEEEecC
Confidence 579999999776 5789999999999999999999874
No 12
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.66 E-value=1.6e-16 Score=148.07 Aligned_cols=112 Identities=12% Similarity=0.184 Sum_probs=92.2
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC-----
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL----- 201 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL----- 201 (535)
....++++|||||||+ |.+++.+|+...++++|++||+++++++.|+++++..| +.++|+|+++|+.+....+
T Consensus 54 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~l~~~~~~~~ 131 (221)
T 3u81_A 54 IREYSPSLVLELGAYC-GYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG-LQDKVTILNGASQDLIPQLKKKYD 131 (221)
T ss_dssp HHHHCCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESCHHHHGGGTTTTSC
T ss_pred HHhcCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC-CCCceEEEECCHHHHHHHHHHhcC
Confidence 3346789999999995 88889999843458999999999999999999999999 7788999999997754433
Q ss_pred -CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 202 -GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 202 -~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.||+||+++..+...+..+++..+ ++|+|||+|++.+.
T Consensus 132 ~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 132 VDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp CCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred CCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCC
Confidence 4699999987664334445677777 99999999999875
No 13
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.65 E-value=2e-16 Score=146.02 Aligned_cols=108 Identities=20% Similarity=0.267 Sum_probs=93.0
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC------C
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL------G 202 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL------~ 202 (535)
..++++|||||||+ |++++.+|+++.++++|+++|+++++++.|++.++..| +.++++|+++|+.+..... +
T Consensus 62 ~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 62 LMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG-LSDKIGLRLSPAKDTLAELIHAGQAW 139 (225)
T ss_dssp HHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCHHHHHHHHHTTTCTT
T ss_pred hhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC-CCCceEEEeCCHHHHHHHhhhccCCC
Confidence 35789999999995 88889998843338999999999999999999999999 7788999999997654322 5
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.||+||+++.. .++..+++.+.++|+|||+|++.+.
T Consensus 140 ~fD~v~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 140 QYDLIYIDADK---ANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp CEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CccEEEECCCH---HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 79999988765 6789999999999999999999885
No 14
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.65 E-value=2e-15 Score=142.99 Aligned_cols=133 Identities=17% Similarity=0.273 Sum_probs=106.4
Q ss_pred cCccchh------hHHhHHHHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHh
Q 041205 105 RFPYYEN------YVKLAKLEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVS 178 (535)
Q Consensus 105 ~FpYy~N------Yv~LirlE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~ 178 (535)
++.||++ +....+.-...+...+.+.++.+|||||||+ |..++.++++ .+++|+|+|+|+++++.|++.+.
T Consensus 29 ~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~ 105 (273)
T 3bus_A 29 HFGYWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGI-GKPAVRLATA--RDVRVTGISISRPQVNQANARAT 105 (273)
T ss_dssp CCCCCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTT-SHHHHHHHHH--SCCEEEEEESCHHHHHHHHHHHH
T ss_pred eEEecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCC-CHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHH
Confidence 5677754 3333333344555555667899999999996 6666777774 37999999999999999999999
Q ss_pred hcCCcCCCeEEEEccccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 179 SDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 179 ~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
..| +.++++|+++|+.+++...+.||+|+.....+..+++..+++++.++|+|||++++.+.
T Consensus 106 ~~~-~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 106 AAG-LANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp HTT-CTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hcC-CCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 989 77899999999988776667899999776555457889999999999999999998763
No 15
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.65 E-value=1e-15 Score=149.37 Aligned_cols=110 Identities=18% Similarity=0.198 Sum_probs=92.0
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceE
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCI 207 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvV 207 (535)
.+.++.+|||||||+ |..++.+|....++++|+|+|+|+.+++.|++.+...| +.++++|+++|+.+++.+ +.||+|
T Consensus 115 ~l~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~-~~fD~v 191 (305)
T 3ocj_A 115 HLRPGCVVASVPCGW-MSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA-LAGQITLHRQDAWKLDTR-EGYDLL 191 (305)
T ss_dssp HCCTTCEEEETTCTT-CHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST-TGGGEEEEECCGGGCCCC-SCEEEE
T ss_pred hCCCCCEEEEecCCC-CHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECchhcCCcc-CCeEEE
Confidence 357899999999995 67777776334689999999999999999999999999 778899999999988766 789999
Q ss_pred EeccccCChhhH---HHHHHHHHhhcccCeEEEEEc
Q 041205 208 ILAALAGNEEEK---AKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 208 fiaALVgm~edK---~~VL~eL~rvLKPGGvLVvRs 240 (535)
++....+..++. ..++++++++|+|||++++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 192 TSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp ECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 986544322333 358999999999999999876
No 16
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.64 E-value=2.4e-16 Score=145.10 Aligned_cols=105 Identities=19% Similarity=0.278 Sum_probs=91.5
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCC-CcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC-CCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMK-STHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK-LGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~-Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d-L~~FDvV 207 (535)
.++++||||||| .|++++.+|+. ++ +++|+++|+|+++++.|+++++..| +.++++|+++|+.+.... .+ ||+|
T Consensus 55 ~~~~~vLdiG~G-~G~~~~~la~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~-fD~v 130 (210)
T 3c3p_A 55 KQPQLVVVPGDG-LGCASWWFARA-ISISSRVVMIDPDRDNVEHARRMLHDNG-LIDRVELQVGDPLGIAAGQRD-IDIL 130 (210)
T ss_dssp HCCSEEEEESCG-GGHHHHHHHTT-SCTTCEEEEEESCHHHHHHHHHHHHHHS-GGGGEEEEESCHHHHHTTCCS-EEEE
T ss_pred hCCCEEEEEcCC-ccHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHCC-CCceEEEEEecHHHHhccCCC-CCEE
Confidence 468899999999 58899999984 45 8999999999999999999999999 777899999999875333 24 9999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
|+++.. .++..+++.+.++|+|||+|++.+.
T Consensus 131 ~~~~~~---~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 131 FMDCDV---FNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp EEETTT---SCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred EEcCCh---hhhHHHHHHHHHhcCCCeEEEEECc
Confidence 998665 5789999999999999999999774
No 17
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.63 E-value=1.1e-15 Score=143.09 Aligned_cols=117 Identities=16% Similarity=0.145 Sum_probs=97.0
Q ss_pred HHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc
Q 041205 120 YGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 120 ~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~ 199 (535)
...+...+.+.++.+|||||||+ |..++.+|+. + +++|+|+|+++++++.|++.++..| +.++++|+++|+.+++.
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~v~~~~~d~~~~~~ 100 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGS-GEMLCTWARD-H-GITGTGIDMSSLFTAQAKRRAEELG-VSERVHFIHNDAAGYVA 100 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTT-CHHHHHHHHH-T-CCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCCTTCCC
T ss_pred HHHHHHhcCCCCCCEEEEECCCC-CHHHHHHHHh-c-CCeEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEECChHhCCc
Confidence 44444555668899999999997 6667778774 3 7899999999999999999999999 77799999999988766
Q ss_pred CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 200 KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.+.||+|++....+..++...+|+++.++|||||++++...
T Consensus 101 -~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 101 -NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp -SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred -CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 56799999754443346789999999999999999998653
No 18
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.62 E-value=2.2e-15 Score=136.09 Aligned_cols=111 Identities=21% Similarity=0.290 Sum_probs=94.0
Q ss_pred HhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCc
Q 041205 125 ENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEY 204 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~F 204 (535)
......++ +|||||||+ |..+..++++ ++.+|+|+|+|+++++.|++.+...| +..+++|+++|+.+++...+.|
T Consensus 38 ~~~~~~~~-~vLdiG~G~-G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~ 112 (219)
T 3dlc_A 38 NRFGITAG-TCIDIGSGP-GALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADAN-LNDRIQIVQGDVHNIPIEDNYA 112 (219)
T ss_dssp HHHCCCEE-EEEEETCTT-SHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECBTTBCSSCTTCE
T ss_pred HhcCCCCC-EEEEECCCC-CHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhcc-ccCceEEEEcCHHHCCCCcccc
Confidence 33443444 999999996 6667778773 78999999999999999999999999 6789999999998877666789
Q ss_pred ceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 205 DCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 205 DvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|+|++....+..++...++++++++|+|||.+++.+
T Consensus 113 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 113 DLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 999987655445788999999999999999999865
No 19
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.62 E-value=3.3e-15 Score=143.70 Aligned_cols=133 Identities=14% Similarity=0.134 Sum_probs=105.0
Q ss_pred cCccchhh------HHhHHHHHHHHHHhh----CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHH
Q 041205 105 RFPYYENY------VKLAKLEYGALIENT----GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLAR 174 (535)
Q Consensus 105 ~FpYy~NY------v~LirlE~~lL~~~~----~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR 174 (535)
++.||++. ....+.....+...+ .+.++.+|||||||+ |..++.+++. .|++|+|+|+++.+++.|+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~ 122 (297)
T 2o57_A 46 HVGLYKEPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGY-GGAARFLVRK--FGVSIDCLNIAPVQNKRNE 122 (297)
T ss_dssp CSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTT-SHHHHHHHHH--HCCEEEEEESCHHHHHHHH
T ss_pred EEEecCCCCCCcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCC-CHHHHHHHHH--hCCEEEEEeCCHHHHHHHH
Confidence 45676542 333334444455555 667899999999996 5666677773 2789999999999999999
Q ss_pred HHHhhcCCcCCCeEEEEccccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 175 RIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 175 ~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.++..| +..+++|+++|+.+++...+.||+|+.....+..+++..+|.++.++|||||+|++...
T Consensus 123 ~~~~~~~-~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 123 EYNNQAG-LADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp HHHHHHT-CTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHhcC-CCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999989 77899999999998877667899999865544346789999999999999999998763
No 20
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.62 E-value=1.4e-15 Score=140.75 Aligned_cols=109 Identities=18% Similarity=0.263 Sum_probs=93.8
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC------
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL------ 201 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL------ 201 (535)
...++++||||||| .|++++.+|+...++++|+++|+|+++++.|+++++..| +.++++|+++|+.+....+
T Consensus 66 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~i~~~~~d~~~~~~~~~~~~~~ 143 (229)
T 2avd_A 66 RLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE-AEHKIDLRLKPALETLDELLAAGEA 143 (229)
T ss_dssp HHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT-CTTTEEEEESCHHHHHHHHHHTTCT
T ss_pred HhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC-CCCeEEEEEcCHHHHHHHHHhcCCC
Confidence 34678999999999 589999999843338999999999999999999999999 7789999999997653322
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.||+||+++.. ..+..+++.+.+.|+|||++++.+.
T Consensus 144 ~~~D~v~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 144 GTFDVAVVDADK---ENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp TCEEEEEECSCS---TTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCccEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEECC
Confidence 579999998765 5789999999999999999999875
No 21
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.62 E-value=2.7e-15 Score=141.68 Aligned_cols=142 Identities=13% Similarity=0.179 Sum_probs=107.3
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC---CCCcce
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK---LGEYDC 206 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d---L~~FDv 206 (535)
.++.+|||||||+ |+.++.+|. ..++++|+|||+|+++++.|+++++..| +. +++|+++|+.+++.. .+.||+
T Consensus 69 ~~~~~vLDiG~G~-G~~~~~la~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDVGAGA-GFPSLPIKI-CFPHLHVTIVDSLNKRITFLEKLSEALQ-LE-NTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GGCCEEEEECSSS-CTTHHHHHH-HCTTCEEEEEESCHHHHHHHHHHHHHHT-CS-SEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCCEEEEecCCC-CHHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-CEEEEeccHHHhcccccccCCccE
Confidence 5789999999995 788888886 3578999999999999999999999999 54 699999999887643 357999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEcccccccccCCCCcc-----ccCCcEEEE---EEcCCCcceeeeEEE
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGARAFLYPVVEH-----ELFDFKVLS---IFHPTNDVINSVVLL 278 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~Vdp-----dl~GFeil~---v~hP~~eVINSVVvA 278 (535)
|++.+ + .+...+++.+.++|+|||++++-.+.... ..+.. ...||++.. +.+|..+....++++
T Consensus 145 V~~~~-~---~~~~~~l~~~~~~LkpgG~l~~~~g~~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~ 216 (240)
T 1xdz_A 145 VTARA-V---ARLSVLSELCLPLVKKNGLFVALKAASAE----EELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVI 216 (240)
T ss_dssp EEEEC-C---SCHHHHHHHHGGGEEEEEEEEEEECC-CH----HHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEE
T ss_pred EEEec-c---CCHHHHHHHHHHhcCCCCEEEEEeCCCch----HHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEE
Confidence 99876 3 47899999999999999999885321100 00110 236887754 346765544567777
Q ss_pred ecCCC
Q 041205 279 QLPKD 283 (535)
Q Consensus 279 RK~~~ 283 (535)
+|..+
T Consensus 217 ~k~~~ 221 (240)
T 1xdz_A 217 RKIKN 221 (240)
T ss_dssp EECSC
T ss_pred EecCC
Confidence 77533
No 22
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.61 E-value=1.6e-15 Score=143.26 Aligned_cols=128 Identities=14% Similarity=0.197 Sum_probs=98.6
Q ss_pred ccchhhHHhHHHHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCC
Q 041205 107 PYYENYVKLAKLEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKR 186 (535)
Q Consensus 107 pYy~NYv~LirlE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~r 186 (535)
.|..........++..+...+...++.+|||||||+ |..+..++++ +.+|+|+|+|+++++.|++.++..| + .+
T Consensus 13 ~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~-~-~~ 86 (260)
T 1vl5_A 13 MYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGG-GHVANAFAPF---VKKVVAFDLTEDILKVARAFIEGNG-H-QQ 86 (260)
T ss_dssp ----------CCCHHHHHHHHTCCSCCEEEEETCTT-CHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTT-C-CS
T ss_pred eeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCC-CHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHhcC-C-Cc
Confidence 565555555556666666667668899999999996 6666778773 3599999999999999999999888 4 47
Q ss_pred eEEEEccccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 187 MKFLTCDIMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 187 I~Fi~GDA~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
++|+++|+.+++...+.||+|+.....+..++...+|.++.++|+|||+|++..
T Consensus 87 v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 87 VEYVQGDAEQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEEEECCC-CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEecHHhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999999877766789999987555445788999999999999999999864
No 23
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.61 E-value=1.1e-14 Score=140.80 Aligned_cols=140 Identities=11% Similarity=0.108 Sum_probs=106.7
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC---CCCcce
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK---LGEYDC 206 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d---L~~FDv 206 (535)
.++.+|||||||+ |+.++.+|. ..++++|++||+|+++++.|+++++..| +. +|+|+++|+.++... .+.||+
T Consensus 79 ~~~~~vLDiG~G~-G~~~i~la~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-l~-~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGA-GFPGLPLKI-VRPELELVLVDATRKKVAFVERAIEVLG-LK-GARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTT-TTTHHHHHH-HCTTCEEEEEESCHHHHHHHHHHHHHHT-CS-SEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCC-CHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHhC-CC-ceEEEECcHHHhhcccccCCCceE
Confidence 5689999999995 888899988 4689999999999999999999999999 64 599999999887653 257999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEcccccccccCCCCcc-----ccCCcEEEE---EEcCCCcceeeeEEE
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGARAFLYPVVEH-----ELFDFKVLS---IFHPTNDVINSVVLL 278 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~Vdp-----dl~GFeil~---v~hP~~eVINSVVvA 278 (535)
|+..+.. +...+++.+.++|+|||++++-.+... ...+.. ...||++.. +..|..+....+++.
T Consensus 155 I~s~a~~----~~~~ll~~~~~~LkpgG~l~~~~g~~~----~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~ 226 (249)
T 3g89_A 155 AVARAVA----PLCVLSELLLPFLEVGGAAVAMKGPRV----EEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVL 226 (249)
T ss_dssp EEEESSC----CHHHHHHHHGGGEEEEEEEEEEECSCC----HHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEE
T ss_pred EEECCcC----CHHHHHHHHHHHcCCCeEEEEEeCCCc----HHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEE
Confidence 9987543 678999999999999999887443110 001111 124887654 334765555667777
Q ss_pred ecC
Q 041205 279 QLP 281 (535)
Q Consensus 279 RK~ 281 (535)
+|.
T Consensus 227 ~k~ 229 (249)
T 3g89_A 227 EKT 229 (249)
T ss_dssp EEC
T ss_pred EeC
Confidence 775
No 24
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.61 E-value=7e-16 Score=144.16 Aligned_cols=107 Identities=19% Similarity=0.325 Sum_probs=92.5
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC---CCCcc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK---LGEYD 205 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d---L~~FD 205 (535)
..++++|||||||+ |+.++.+|+ ..++++|+++|+++++++.|++.++..| +.++++|+++|+.+.... .+.||
T Consensus 52 ~~~~~~vLdiG~G~-G~~~~~la~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~fD 128 (233)
T 2gpy_A 52 MAAPARILEIGTAI-GYSAIRMAQ-ALPEATIVSIERDERRYEEAHKHVKALG-LESRIELLFGDALQLGEKLELYPLFD 128 (233)
T ss_dssp HHCCSEEEEECCTT-SHHHHHHHH-HCTTCEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCGGGSHHHHTTSCCEE
T ss_pred ccCCCEEEEecCCC-cHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECCHHHHHHhcccCCCcc
Confidence 35789999999995 788888888 4678999999999999999999999999 777899999999874332 35799
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+||+++.. .+...+++.+.+.|+|||+|++.+.
T Consensus 129 ~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 129 VLFIDAAK---GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EEEEEGGG---SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred EEEECCCH---HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 99998776 5789999999999999999999864
No 25
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.61 E-value=6.1e-15 Score=134.81 Aligned_cols=119 Identities=13% Similarity=0.148 Sum_probs=99.2
Q ss_pred HHHHH-HHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccc
Q 041205 116 AKLEY-GALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDI 194 (535)
Q Consensus 116 irlE~-~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA 194 (535)
++.|. ..+...+.+.++.+|||||||+ |..++.+|+. .++++|+++|+|+++++.|+++++..| + ++++++++|+
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~v~~~~~d~ 99 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGS-ASVSIEASNL-MPNGRIFALERNPQYLGFIRDNLKKFV-A-RNVTLVEAFA 99 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTT-CHHHHHHHHH-CTTSEEEEEECCHHHHHHHHHHHHHHT-C-TTEEEEECCT
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCC-CHHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHHhC-C-CcEEEEeCCh
Confidence 55554 4444455668899999999996 6777888883 677999999999999999999999999 5 7899999999
Q ss_pred cccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 195 MEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 195 ~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.+.......||+||+.... .+...+++++.+.|+|||++++...
T Consensus 100 ~~~~~~~~~~D~i~~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 100 PEGLDDLPDPDRVFIGGSG---GMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp TTTCTTSCCCSEEEESCCT---TCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hhhhhcCCCCCEEEECCCC---cCHHHHHHHHHHhcCCCeEEEEEec
Confidence 7766656779999998655 4788999999999999999998653
No 26
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.60 E-value=2.9e-15 Score=142.48 Aligned_cols=106 Identities=18% Similarity=0.154 Sum_probs=89.4
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC--CCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK--LGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d--L~~FDvV 207 (535)
.++.|||||||| .|+++..+|++ .+.+|+|||+|+++++.|++.++..+ .+++|+.+|+.++..+ .+.||.|
T Consensus 59 ~~G~rVLdiG~G-~G~~~~~~~~~--~~~~v~~id~~~~~~~~a~~~~~~~~---~~~~~~~~~a~~~~~~~~~~~FD~i 132 (236)
T 3orh_A 59 SKGGRVLEVGFG-MAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCT-TSHHHHHHTTS--CEEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred cCCCeEEEECCC-ccHHHHHHHHh--CCcEEEEEeCCHHHHHHHHHHHhhCC---CceEEEeehHHhhcccccccCCceE
Confidence 678999999999 58999999883 45799999999999999999998877 4789999999876543 3569999
Q ss_pred EeccccC----C-hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALAG----N-EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVg----m-~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+++.... . ..++..++++++|+|||||+|++-+.
T Consensus 133 ~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~ 171 (236)
T 3orh_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred EEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEec
Confidence 9875432 1 57899999999999999999998763
No 27
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.60 E-value=7.1e-15 Score=135.16 Aligned_cols=127 Identities=13% Similarity=0.220 Sum_probs=96.0
Q ss_pred hhHHhHHHHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCC----C
Q 041205 111 NYVKLAKLEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEK----R 186 (535)
Q Consensus 111 NYv~LirlE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~----r 186 (535)
.|.++...-+..+...+...++.+|||||||+ |..+..+++ ..+..+|+|+|+|+.+++.|++.+...| +.. +
T Consensus 9 ~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~ 85 (219)
T 3jwg_A 9 KKLNLNQQRLGTVVAVLKSVNAKKVIDLGCGE-GNLLSLLLK-DKSFEQITGVDVSYSVLERAKDRLKIDR-LPEMQRKR 85 (219)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCCEEEEETCTT-CHHHHHHHT-STTCCEEEEEESCHHHHHHHHHHHTGGG-SCHHHHTT
T ss_pred cCCcchHHHHHHHHHHHhhcCCCEEEEecCCC-CHHHHHHHh-cCCCCEEEEEECCHHHHHHHHHHHHhhc-cccccCcc
Confidence 33444444444444444446789999999996 666677777 3556899999999999999999998877 554 8
Q ss_pred eEEEEccccccccCCCCcceEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 187 MKFLTCDIMEVKEKLGEYDCIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 187 I~Fi~GDA~el~~dL~~FDvVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
++|+++|+...+...+.||+|++....+. .++...+++++.++|+|||++++..
T Consensus 86 v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 86 ISLFQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EEEEECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eEEEeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 99999999766655578999997765543 3355899999999999999777644
No 28
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.60 E-value=8.8e-15 Score=133.10 Aligned_cols=138 Identities=17% Similarity=0.195 Sum_probs=102.9
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
++.+|||||||+ |..++.++. ..++.+|+|+|+|+++++.|++.+...| +. +++|+++|+.+.+ ..+.||+|+..
T Consensus 65 ~~~~vLDiG~G~-G~~~~~l~~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~v~~~~~d~~~~~-~~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGP-GLPGIPLSI-VRPEAHFTLLDSLGKRVRFLRQVQHELK-LE-NIEPVQSRVEEFP-SEPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTT-TTTHHHHHH-HCTTSEEEEEESCHHHHHHHHHHHHHTT-CS-SEEEEECCTTTSC-CCSCEEEEECS
T ss_pred CCCeEEEECCCC-CHHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-CeEEEecchhhCC-ccCCcCEEEEe
Confidence 478999999996 666677777 4678999999999999999999999988 54 4999999998755 33579999975
Q ss_pred cccCChhhHHHHHHHHHhhcccCeEEEEEcccccccccCCCCccccCCcEEEE---EEcCCCcceeeeEEEecC
Q 041205 211 ALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGARAFLYPVVEHELFDFKVLS---IFHPTNDVINSVVLLQLP 281 (535)
Q Consensus 211 ALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~Vdpdl~GFeil~---v~hP~~eVINSVVvARK~ 281 (535)
+. .+...++..+.+.|+|||.+++...... ...+..-..||++.. ...|...-...+++.+|.
T Consensus 140 ~~----~~~~~~l~~~~~~L~~gG~l~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 140 AF----ASLNDMVSWCHHLPGEQGRFYALKGQMP----EDEIALLPEEYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp CS----SSHHHHHHHHTTSEEEEEEEEEEESSCC----HHHHHTSCTTEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred cc----CCHHHHHHHHHHhcCCCcEEEEEeCCCc----hHHHHHHhcCCceeeeeeeccCCCCCceEEEEEEec
Confidence 43 4688999999999999999998643110 000110124898764 356765556778888774
No 29
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.59 E-value=2e-15 Score=142.19 Aligned_cols=108 Identities=20% Similarity=0.253 Sum_probs=91.7
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC--------
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK-------- 200 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d-------- 200 (535)
..++++|||||||+ |+.++.+|+...++++|+++|+|+++++.|++.++..| +.++++|+++|+.+....
T Consensus 58 ~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 58 ISGAKRIIEIGTFT-GYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG-LENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HHTCSEEEEECCTT-CHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred hhCcCEEEEEeCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCEEEEECCHHHHHHHHHhhcccc
Confidence 35789999999995 88888998843337899999999999999999999999 677899999999764321
Q ss_pred --------C-CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 201 --------L-GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 201 --------L-~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
. +.||+||+++.. ++...+++.+.+.|+|||+|++.+.
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDADK---ENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred cccccccCCCCCcCEEEEeCCH---HHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 1 579999998655 6788999999999999999999874
No 30
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.59 E-value=3.4e-14 Score=127.18 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=90.0
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcc
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
.+...++.+|||||||+ |..++.+++ .+.+|+|+|+|+.+++.|++.+...| + .+++|+++|+.+.+. .+.||
T Consensus 27 ~~~~~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~~~~~~~d~~~~~~-~~~~D 99 (199)
T 2xvm_A 27 AVKVVKPGKTLDLGCGN-GRNSLYLAA---NGYDVDAWDKNAMSIANVERIKSIEN-L-DNLHTRVVDLNNLTF-DRQYD 99 (199)
T ss_dssp HTTTSCSCEEEEETCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHHT-C-TTEEEEECCGGGCCC-CCCEE
T ss_pred HhhccCCCeEEEEcCCC-CHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHhCC-C-CCcEEEEcchhhCCC-CCCce
Confidence 34446788999999996 667778888 37899999999999999999998888 4 579999999988765 56799
Q ss_pred eEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|+.....+. .++...+++++.++|+|||.+++-+
T Consensus 100 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 100 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9998765543 4588999999999999999977654
No 31
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.59 E-value=6.6e-15 Score=137.88 Aligned_cols=109 Identities=21% Similarity=0.220 Sum_probs=93.9
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceE
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCI 207 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvV 207 (535)
.+.++.+|||||||+ |..++.+++. .+ ++|+|+|+|+.+++.|++.+...| +.++++|+++|+.+++...+.||+|
T Consensus 43 ~~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~fD~v 118 (257)
T 3f4k_A 43 ELTDDAKIADIGCGT-GGQTLFLADY-VK-GQITGIDLFPDFIEIFNENAVKAN-CADRVKGITGSMDNLPFQNEELDLI 118 (257)
T ss_dssp CCCTTCEEEEETCTT-SHHHHHHHHH-CC-SEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTSCSSCTTCEEEE
T ss_pred cCCCCCeEEEeCCCC-CHHHHHHHHh-CC-CeEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECChhhCCCCCCCEEEE
Confidence 567889999999996 6777788873 33 599999999999999999999999 7788999999998877666789999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
++....+.. +...+++++.++|+|||++++...
T Consensus 119 ~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 119 WSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp EEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 987666543 788999999999999999999763
No 32
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.59 E-value=1.9e-14 Score=134.06 Aligned_cols=118 Identities=8% Similarity=0.109 Sum_probs=96.2
Q ss_pred HhHHHHH-HHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc
Q 041205 114 KLAKLEY-GALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC 192 (535)
Q Consensus 114 ~LirlE~-~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G 192 (535)
.++..+. ..+...+.+.++++|||||||+ |..++.+|+. +++|+|||+|+++++.|+++++..| +.++++|+++
T Consensus 37 ~~~~~~~~~~~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g-~~~~v~~~~~ 111 (204)
T 3njr_A 37 QITKSPMRALTLAALAPRRGELLWDIGGGS-GSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYG-LSPRMRAVQG 111 (204)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEETCTT-CHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEES
T ss_pred CCCcHHHHHHHHHhcCCCCCCEEEEecCCC-CHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcC-CCCCEEEEeC
Confidence 4444443 3334445668899999999996 7778888882 8999999999999999999999999 6668999999
Q ss_pred cccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 193 DIMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 193 DA~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
|+.+.......||+||+.... +.. +++++.+.|+|||++++...
T Consensus 112 d~~~~~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 112 TAPAALADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp CTTGGGTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred chhhhcccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEec
Confidence 998855555679999987633 455 99999999999999998664
No 33
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.59 E-value=6e-15 Score=140.19 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=94.2
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
+.++.+|||||||+ |..++.+|+. ++++|+|+|+|+.+++.|++.++..| +.++++|+++|+.+++...+.||+|+
T Consensus 44 ~~~~~~vLDiGcG~-G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~i~ 119 (267)
T 3kkz_A 44 LTEKSLIADIGCGT-GGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSG-LQNRVTGIVGSMDDLPFRNEELDLIW 119 (267)
T ss_dssp CCTTCEEEEETCTT-CHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTSCCCCTTCEEEEE
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcC-CCcCcEEEEcChhhCCCCCCCEEEEE
Confidence 67899999999996 6777888883 77899999999999999999999999 77889999999988776667899999
Q ss_pred eccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 209 LAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 209 iaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+....+.. +...+++++.++|+|||++++.+.
T Consensus 120 ~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 120 SEGAIYNI-GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp ESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EcCCceec-CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 87655433 789999999999999999998763
No 34
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.58 E-value=1.1e-14 Score=134.00 Aligned_cols=109 Identities=10% Similarity=0.162 Sum_probs=89.2
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCC----CeEEEEccccccccCCCCc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEK----RMKFLTCDIMEVKEKLGEY 204 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~----rI~Fi~GDA~el~~dL~~F 204 (535)
..++.+|||||||+ |..+..+++ ..+.++|+|+|+|+++++.|++.+...| +.. +++|+++|+...+...+.|
T Consensus 27 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~f 103 (217)
T 3jwh_A 27 QSNARRVIDLGCGQ-GNLLKILLK-DSFFEQITGVDVSYRSLEIAQERLDRLR-LPRNQWERLQLIQGALTYQDKRFHGY 103 (217)
T ss_dssp HTTCCEEEEETCTT-CHHHHHHHH-CTTCSEEEEEESCHHHHHHHHHHHTTCC-CCHHHHTTEEEEECCTTSCCGGGCSC
T ss_pred hcCCCEEEEeCCCC-CHHHHHHHh-hCCCCEEEEEECCHHHHHHHHHHHHHhc-CCcccCcceEEEeCCcccccccCCCc
Confidence 36789999999996 566677777 3556899999999999999999998888 554 8999999987655555689
Q ss_pred ceEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 205 DCIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 205 DvVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|+|++....+. .++...+++++.++|+|||++++..
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 104 DAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred CEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 99998766543 3455899999999999999887754
No 35
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.58 E-value=1e-14 Score=142.68 Aligned_cols=116 Identities=9% Similarity=0.201 Sum_probs=96.1
Q ss_pred HHHHHHhhC-CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc
Q 041205 120 YGALIENTG-VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK 198 (535)
Q Consensus 120 ~~lL~~~~~-l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~ 198 (535)
...+...+. +.++.+|||||||+ |..++.++++ .+++|+|+|+++++++.|++.++..| +..+++|+++|+.+++
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~-G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~ 180 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGR-GGSMVMAHRR--FGSRVEGVTLSAAQADFGNRRARELR-IDDHVRSRVCNMLDTP 180 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTT-SHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTSCC
T ss_pred HHHHHHHhccCCCCCEEEEecCCC-CHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHHHHHcC-CCCceEEEECChhcCC
Confidence 334444444 67899999999996 5666777774 27899999999999999999999999 7789999999998877
Q ss_pred cCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 199 EKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 199 ~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
...+.||+|+.....+.. +...+++++.++|||||++++-+
T Consensus 181 ~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 181 FDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp CCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 666789999986554333 59999999999999999999866
No 36
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.57 E-value=3.8e-14 Score=128.27 Aligned_cols=111 Identities=14% Similarity=0.111 Sum_probs=90.6
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc-CCCCcceE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE-KLGEYDCI 207 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~-dL~~FDvV 207 (535)
+.++++|||+|||+ |..++.++++..++++|+|+|+|+++++.|+++++..| +..+++|+++|+.+++. ..+.||+|
T Consensus 20 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 20 VKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN-LIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT-CGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCeEEEECCHHHHhhhccCCceEE
Confidence 46789999999997 66777787744466899999999999999999999998 67799999999987763 33569999
Q ss_pred Eecccc---------CChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALA---------GNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALV---------gm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+++... ....+...++.++.+.|+|||++++...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 976422 1123567899999999999999988754
No 37
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.57 E-value=4.5e-15 Score=137.63 Aligned_cols=104 Identities=12% Similarity=0.110 Sum_probs=83.2
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcC------C----cCCCeEEEEcccccc
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDD------E----IEKRMKFLTCDIMEV 197 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG------~----Ls~rI~Fi~GDA~el 197 (535)
.+.++.+|||||||+ |..+++||+ .|.+|+|||+|++|++.|++.....+ . ...+++|+++|+.++
T Consensus 19 ~~~~~~~vLD~GCG~-G~~~~~la~---~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 19 NVVPGARVLVPLCGK-SQDMSWLSG---QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp CCCTTCEEEETTTCC-SHHHHHHHH---HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred ccCCCCEEEEeCCCC-cHhHHHHHH---CCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 346789999999996 677788988 37899999999999999998765310 0 025799999999987
Q ss_pred ccCC-CCcceEEecccc-CC-hhhHHHHHHHHHhhcccCeE
Q 041205 198 KEKL-GEYDCIILAALA-GN-EEEKAKILGHIRKYMKEGGV 235 (535)
Q Consensus 198 ~~dL-~~FDvVfiaALV-gm-~edK~~VL~eL~rvLKPGGv 235 (535)
+... +.||+|+..... ++ .+++..++++++++|||||+
T Consensus 95 ~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 95 TARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp THHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred CcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 7654 679999964333 34 46778899999999999998
No 38
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.3e-14 Score=140.56 Aligned_cols=108 Identities=18% Similarity=0.138 Sum_probs=92.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc-CCcCCCeEEEEccccccccCC------C
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD-DEIEKRMKFLTCDIMEVKEKL------G 202 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l-G~Ls~rI~Fi~GDA~el~~dL------~ 202 (535)
.++.+|||||||+ |..++.+|+.+.++++|+|||+|+.+++.|++.++.. | ...+++|+++|+.+++... +
T Consensus 35 ~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 35 GERKLLVDVGCGP-GTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD-TYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp SCCSEEEEETCTT-THHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC--CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC-CCCceEEEEcCHHhCCccccccccCC
Confidence 6889999999996 6777888863238899999999999999999999887 4 4579999999999877665 6
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.||+|++....++. +...++.++.++|+|||.|++-.
T Consensus 113 ~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 113 KIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp CEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEe
Confidence 79999987666555 89999999999999999998843
No 39
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.57 E-value=2.2e-14 Score=132.09 Aligned_cols=102 Identities=16% Similarity=0.190 Sum_probs=86.4
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..+..+++ .+.+|+|+|+|+.+++.|++.+...| + +++|+++|+.+++.. +.||+|++
T Consensus 36 ~~~~~vLdiG~G~-G~~~~~l~~---~~~~~~~~D~s~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~~~-~~fD~v~~ 107 (246)
T 1y8c_A 36 LVFDDYLDLACGT-GNLTENLCP---KFKNTWAVDLSQEMLSEAENKFRSQG-L--KPRLACQDISNLNIN-RKFDLITC 107 (246)
T ss_dssp CCTTEEEEETCTT-STTHHHHGG---GSSEEEEECSCHHHHHHHHHHHHHTT-C--CCEEECCCGGGCCCS-CCEEEEEE
T ss_pred CCCCeEEEeCCCC-CHHHHHHHH---CCCcEEEEECCHHHHHHHHHHHhhcC-C--CeEEEecccccCCcc-CCceEEEE
Confidence 3789999999996 566677777 36899999999999999999998877 3 799999999887655 67999998
Q ss_pred cc-ccCCh---hhHHHHHHHHHhhcccCeEEEEE
Q 041205 210 AA-LAGNE---EEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 210 aA-LVgm~---edK~~VL~eL~rvLKPGGvLVvR 239 (535)
.. ..+.. ++...+++++.++|+|||++++.
T Consensus 108 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 108 CLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 75 44332 78899999999999999999984
No 40
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.56 E-value=4.1e-14 Score=135.52 Aligned_cols=115 Identities=12% Similarity=0.170 Sum_probs=94.2
Q ss_pred HHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc
Q 041205 120 YGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 120 ~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~ 199 (535)
...+...+.+.++.+|||||||+ |..++.+|+. .|++|+|||+|+++++.|++.+...| +..+++|+++|+.+++
T Consensus 53 ~~~~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~- 127 (287)
T 1kpg_A 53 IDLALGKLGLQPGMTLLDVGCGW-GATMMRAVEK--YDVNVVGLTLSKNQANHVQQLVANSE-NLRSKRVLLAGWEQFD- 127 (287)
T ss_dssp HHHHHTTTTCCTTCEEEEETCTT-SHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHTCC-CCSCEEEEESCGGGCC-
T ss_pred HHHHHHHcCCCCcCEEEEECCcc-cHHHHHHHHH--cCCEEEEEECCHHHHHHHHHHHHhcC-CCCCeEEEECChhhCC-
Confidence 33444445567889999999996 6666777753 36799999999999999999999988 6789999999997654
Q ss_pred CCCCcceEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 200 KLGEYDCIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 200 dL~~FDvVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.||+|+....++. .+++..+++++.++|||||++++...
T Consensus 128 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 128 --EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp --CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred --CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 67999997755533 36889999999999999999998663
No 41
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.56 E-value=4e-14 Score=124.90 Aligned_cols=109 Identities=12% Similarity=0.094 Sum_probs=89.8
Q ss_pred HhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC-CC
Q 041205 125 ENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL-GE 203 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL-~~ 203 (535)
..+.+.++++|||||||+ |..++.+++ ..++++|+++|+|+++++.|++.++..| +.+++ ++++|+.+..... +.
T Consensus 19 ~~~~~~~~~~vldiG~G~-G~~~~~l~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~-~~~~d~~~~~~~~~~~ 94 (178)
T 3hm2_A 19 SALAPKPHETLWDIGGGS-GSIAIEWLR-STPQTTAVCFEISEERRERILSNAINLG-VSDRI-AVQQGAPRAFDDVPDN 94 (178)
T ss_dssp HHHCCCTTEEEEEESTTT-THHHHHHHT-TSSSEEEEEECSCHHHHHHHHHHHHTTT-CTTSE-EEECCTTGGGGGCCSC
T ss_pred HHhcccCCCeEEEeCCCC-CHHHHHHHH-HCCCCeEEEEeCCHHHHHHHHHHHHHhC-CCCCE-EEecchHhhhhccCCC
Confidence 344567889999999996 777788887 4578999999999999999999999999 66689 8999986543333 67
Q ss_pred cceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 204 YDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 204 FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
||+|++....+ . ..+++++.+.|+|||++++...
T Consensus 95 ~D~i~~~~~~~---~-~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 95 PDVIFIGGGLT---A-PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp CSEEEECC-TT---C-TTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCEEEECCccc---H-HHHHHHHHHhcCCCCEEEEEee
Confidence 99999876664 2 7899999999999999998653
No 42
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.55 E-value=3e-14 Score=136.63 Aligned_cols=107 Identities=20% Similarity=0.282 Sum_probs=91.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc-cCCCCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK-EKLGEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~-~dL~~FDvVf 208 (535)
.++.+|||||||+ |..+..+++ .|.+|+|+|+++++++.|++.+...| +..+++|+++|+.+++ ...+.||+|+
T Consensus 67 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 67 PQKLRVLDAGGGE-GQTAIKMAE---RGHQVILCDLSAQMIDRAKQAAEAKG-VSDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SSCCEEEEETCTT-CHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHC-C-CGGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCCEEEEeCCcc-hHHHHHHHH---CCCEEEEEECCHHHHHHHHHHHHhcC-CCcceEEEEcCHHHhhhhcCCCceEEE
Confidence 3478999999996 677788888 38899999999999999999999998 7789999999998876 4456799999
Q ss_pred eccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 209 LAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 209 iaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+....+..++...+++++.++|+|||++++...
T Consensus 142 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 142 FHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECchhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 876665457889999999999999999998663
No 43
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.55 E-value=3.6e-14 Score=129.89 Aligned_cols=100 Identities=12% Similarity=0.159 Sum_probs=83.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..+..+++ .+.+|+|+|+++++++.|++.+. .+++|+++|+.+++.. +.||+|++
T Consensus 44 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~d~~~~~~~-~~fD~v~~ 112 (220)
T 3hnr_A 44 KSFGNVLEFGVGT-GNLTNKLLL---AGRTVYGIEPSREMRMIAKEKLP------KEFSITEGDFLSFEVP-TSIDTIVS 112 (220)
T ss_dssp TCCSEEEEECCTT-SHHHHHHHH---TTCEEEEECSCHHHHHHHHHHSC------TTCCEESCCSSSCCCC-SCCSEEEE
T ss_pred cCCCeEEEeCCCC-CHHHHHHHh---CCCeEEEEeCCHHHHHHHHHhCC------CceEEEeCChhhcCCC-CCeEEEEE
Confidence 5789999999996 666677777 37899999999999999998865 3689999999987766 78999998
Q ss_pred ccccCChhhH--HHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGNEEEK--AKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm~edK--~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+..++. ..++.++.++|+|||.+++..
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 7666443444 449999999999999999875
No 44
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.55 E-value=3.3e-14 Score=127.52 Aligned_cols=107 Identities=14% Similarity=0.098 Sum_probs=86.3
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc-CCCCcceE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE-KLGEYDCI 207 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~-dL~~FDvV 207 (535)
+.++++|||||||+ |..++.+|++ +++|+|||+|+++++.|++.++..| + .+++|+++|+.++.. ..+.||+|
T Consensus 20 ~~~~~~vLDiGcG~-G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~-~-~~v~~~~~~~~~l~~~~~~~fD~v 93 (185)
T 3mti_A 20 LDDESIVVDATMGN-GNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLG-I-ENTELILDGHENLDHYVREPIRAA 93 (185)
T ss_dssp CCTTCEEEESCCTT-SHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHT-C-CCEEEEESCGGGGGGTCCSCEEEE
T ss_pred CCCCCEEEEEcCCC-CHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEeCcHHHHHhhccCCcCEE
Confidence 46789999999996 7777888882 8999999999999999999999999 6 789999988876542 23469999
Q ss_pred Eecc-ccC--------ChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAA-LAG--------NEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaA-LVg--------m~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
++.. .+. ...+...+++++.++|||||++++-..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 8762 111 125667889999999999999988654
No 45
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.54 E-value=9.4e-14 Score=122.64 Aligned_cols=142 Identities=15% Similarity=0.159 Sum_probs=101.8
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceE
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCI 207 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvV 207 (535)
.+.++.+|||||||+ |..+..+++. +.+|+|+|+++++++.|++. . .+++|+++| .+...+.||+|
T Consensus 14 ~~~~~~~vLDiG~G~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~----~---~~v~~~~~d---~~~~~~~~D~v 79 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGN-GFYCKYLLEF---ATKLYCIDINVIALKEVKEK----F---DSVITLSDP---KEIPDNSVDFI 79 (170)
T ss_dssp HSSCCEEEEEETCTT-CTTHHHHHTT---EEEEEEECSCHHHHHHHHHH----C---TTSEEESSG---GGSCTTCEEEE
T ss_pred CcCCCCeEEEECCCC-CHHHHHHHhh---cCeEEEEeCCHHHHHHHHHh----C---CCcEEEeCC---CCCCCCceEEE
Confidence 347889999999996 6666777773 25999999999999999988 2 478999999 34555679999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEEcccccccccCCC----Ccc-----ccCCcEEEEEEcCCCcceeeeEEE
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGARAFLYPV----VEH-----ELFDFKVLSIFHPTNDVINSVVLL 278 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~----Vdp-----dl~GFeil~v~hP~~eVINSVVvA 278 (535)
++....+..++...+++++.+.|+|||++++.+...-.....|. .+. -+.||++..+..... . ...+++
T Consensus 80 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gf~~~~~~~~~~-~-~~~l~~ 157 (170)
T 3i9f_A 80 LFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFSNFVVEKRFNPTP-Y-HFGLVL 157 (170)
T ss_dssp EEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTTTEEEEEEECSST-T-EEEEEE
T ss_pred EEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHhCcEEEEccCCCC-c-eEEEEE
Confidence 98766655578899999999999999999997642211111111 111 124999987776554 2 335666
Q ss_pred ecCCCCC
Q 041205 279 QLPKDPP 285 (535)
Q Consensus 279 RK~~~~~ 285 (535)
++..++|
T Consensus 158 ~~~~~~~ 164 (170)
T 3i9f_A 158 KRKTSEG 164 (170)
T ss_dssp EECCCCS
T ss_pred ecCCCCc
Confidence 6654333
No 46
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.54 E-value=3e-14 Score=133.69 Aligned_cols=115 Identities=16% Similarity=0.128 Sum_probs=93.2
Q ss_pred HHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc
Q 041205 118 LEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV 197 (535)
Q Consensus 118 lE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el 197 (535)
.++..+...++..++.+|||||||+ |..+..+++. ...+|+|+|+++++++.|++.+. + .+++|+++|+.++
T Consensus 31 ~~~~~l~~~~~~~~~~~vLD~GcG~-G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~--~---~~~~~~~~d~~~~ 102 (253)
T 3g5l_A 31 GEWHELKKMLPDFNQKTVLDLGCGF-GWHCIYAAEH--GAKKVLGIDLSERMLTEAKRKTT--S---PVVCYEQKAIEDI 102 (253)
T ss_dssp HHHHHHHTTCCCCTTCEEEEETCTT-CHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHCC--C---TTEEEEECCGGGC
T ss_pred hhHHHHHHhhhccCCCEEEEECCCC-CHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhhc--c---CCeEEEEcchhhC
Confidence 3455555555556889999999996 6666777772 22399999999999999999876 3 5799999999887
Q ss_pred ccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 198 KEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 198 ~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+...+.||+|++....+..++...+++++.++|+|||++++..
T Consensus 103 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 103 AIEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEe
Confidence 7666789999987655445789999999999999999999964
No 47
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.54 E-value=1e-13 Score=125.51 Aligned_cols=107 Identities=13% Similarity=0.107 Sum_probs=89.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC--CCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK--LGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d--L~~FDvV 207 (535)
.++.+|||+|||+ |..++.++. .+..+|+|||+|+++++.|+++++..| + ++++|+++|+.+.+.. .+.||+|
T Consensus 43 ~~~~~vLDlgcG~-G~~~~~~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGS-GALGLEALS--RGAASVLFVESDQRSAAVIARNIEALG-L-SGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTT-CHHHHHHHH--TTCSEEEEEECCHHHHHHHHHHHHHHT-C-SCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCc-CHHHHHHHH--CCCCeEEEEECCHHHHHHHHHHHHHcC-C-CceEEEEccHHHHHhhccCCCccEE
Confidence 5789999999996 555565655 255689999999999999999999999 5 7899999999887542 3579999
Q ss_pred EeccccCC-hhhHHHHHHHHHh--hcccCeEEEEEcc
Q 041205 208 ILAALAGN-EEEKAKILGHIRK--YMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVgm-~edK~~VL~eL~r--vLKPGGvLVvRsa 241 (535)
+++...+. .++...++..+.+ +|+|||++++...
T Consensus 118 ~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 118 LADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 99866554 4789999999999 9999999999764
No 48
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.54 E-value=3.2e-14 Score=135.23 Aligned_cols=110 Identities=24% Similarity=0.324 Sum_probs=94.5
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceE
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCI 207 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvV 207 (535)
.+.++.+|||||||+ |..+..+++ ..|+++|+|+|+|+.+++.|++.+...| + .+++|+++|+.+++...+.||+|
T Consensus 34 ~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~~~~~~~d~~~~~~~~~~fD~v 109 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGI-GAQTVILAK-NNPDAEITSIDISPESLEKARENTEKNG-I-KNVKFLQANIFSLPFEDSSFDHI 109 (276)
T ss_dssp CCCTTCEEEETTCTT-SHHHHHHHH-HCTTSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEECCGGGCCSCTTCEEEE
T ss_pred cCCCCCeEEEecCCC-CHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-C-CCcEEEEcccccCCCCCCCeeEE
Confidence 457889999999996 566677777 3778999999999999999999999988 4 57999999999877766789999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
++....+..++...++.++.++|+|||++++...
T Consensus 110 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 110 FVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9876654456788999999999999999999764
No 49
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.54 E-value=4.2e-14 Score=132.16 Aligned_cols=105 Identities=15% Similarity=0.203 Sum_probs=88.3
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceE
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCI 207 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvV 207 (535)
.+.++.+|||||||+ |..++.+++ .+++|+|+|+|+++++.|++.+ ..+ ..+++|+++|+.+++...+.||+|
T Consensus 36 ~~~~~~~vLDiG~G~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~-~~~--~~~~~~~~~d~~~~~~~~~~fD~v 108 (263)
T 2yqz_A 36 PKGEEPVFLELGVGT-GRIALPLIA---RGYRYIALDADAAMLEVFRQKI-AGV--DRKVQVVQADARAIPLPDESVHGV 108 (263)
T ss_dssp CSSSCCEEEEETCTT-STTHHHHHT---TTCEEEEEESCHHHHHHHHHHT-TTS--CTTEEEEESCTTSCCSCTTCEEEE
T ss_pred CCCCCCEEEEeCCcC-CHHHHHHHH---CCCEEEEEECCHHHHHHHHHHh-hcc--CCceEEEEcccccCCCCCCCeeEE
Confidence 457889999999997 566677777 3789999999999999999998 322 368999999998877666779999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
++....+..++...++.++.++|+|||.+++.
T Consensus 109 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 109 IVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 98766655568899999999999999999875
No 50
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.54 E-value=8.9e-14 Score=135.61 Aligned_cols=115 Identities=11% Similarity=0.105 Sum_probs=95.2
Q ss_pred HHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc
Q 041205 120 YGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 120 ~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~ 199 (535)
...+...+.+.++.+|||||||+ |..++.+++.+ |++|+|+|+|+++++.|++.+...| +.++++|+++|+.+++
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~- 153 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASID-TNRSRQVLLQGWEDFA- 153 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSC-CSSCEEEEESCGGGCC-
T ss_pred HHHHHHhcCCCCcCEEEEEcccc-hHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECChHHCC-
Confidence 34444445667889999999997 66667787742 7899999999999999999999999 7788999999997753
Q ss_pred CCCCcceEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 200 KLGEYDCIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 200 dL~~FDvVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.||+|+.....+. .++...+++++.++|+|||++++...
T Consensus 154 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp --CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred --CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 67999997755543 37899999999999999999998654
No 51
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.54 E-value=9e-14 Score=134.90 Aligned_cols=115 Identities=10% Similarity=0.069 Sum_probs=94.1
Q ss_pred HHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc
Q 041205 120 YGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 120 ~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~ 199 (535)
+..+...+.+.++.+|||||||+ |..++.+|++ + |++|+|+|+|+++++.|++.+...| +.++++|+++|+.++
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~-- 134 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGW-GSTMRHAVAE-Y-DVNVIGLTLSENQYAHDKAMFDEVD-SPRRKEVRIQGWEEF-- 134 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTT-SHHHHHHHHH-H-CCEEEEEECCHHHHHHHHHHHHHSC-CSSCEEEEECCGGGC--
T ss_pred HHHHHHHcCCCCcCEEEEeeccC-cHHHHHHHHh-C-CCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECCHHHc--
Confidence 34444445668899999999997 6666778773 2 5899999999999999999999999 778999999999875
Q ss_pred CCCCcceEEeccccCCh---------hhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 200 KLGEYDCIILAALAGNE---------EEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~---------edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.+.||+|+.....+.. ++...+++++.++|+|||++++...
T Consensus 135 -~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 135 -DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp -CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred -CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 4679999987555333 4458999999999999999998663
No 52
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.54 E-value=4e-14 Score=131.80 Aligned_cols=105 Identities=18% Similarity=0.194 Sum_probs=88.4
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
++.+|||||||+ |..++.+++ ++.+|+|+|+|+.+++.|++.+...| ...+++|+++|+.+.+. ...||+|+..
T Consensus 66 ~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~-~~~fD~v~~~ 139 (235)
T 3lcc_A 66 PLGRALVPGCGG-GHDVVAMAS---PERFVVGLDISESALAKANETYGSSP-KAEYFSFVKEDVFTWRP-TELFDLIFDY 139 (235)
T ss_dssp CCEEEEEETCTT-CHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSG-GGGGEEEECCCTTTCCC-SSCEEEEEEE
T ss_pred CCCCEEEeCCCC-CHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccC-CCcceEEEECchhcCCC-CCCeeEEEEC
Confidence 456999999996 666677877 78999999999999999999998876 56789999999987653 3479999987
Q ss_pred cccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 211 ALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 211 ALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
...+. .++...+++++.+.|+|||+|++...
T Consensus 140 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 140 VFFCAIEPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp SSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 66544 45899999999999999999988553
No 53
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.54 E-value=1.5e-13 Score=131.72 Aligned_cols=103 Identities=17% Similarity=0.206 Sum_probs=87.5
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..++.+++ .|.+|+|+|+|+.+++.|++.+...| + +++|+++|+.+.+. .+.||+|++
T Consensus 119 ~~~~~vLD~GcG~-G~~~~~l~~---~g~~v~~vD~s~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~~-~~~fD~i~~ 190 (286)
T 3m70_A 119 ISPCKVLDLGCGQ-GRNSLYLSL---LGYDVTSWDHNENSIAFLNETKEKEN-L--NISTALYDINAANI-QENYDFIVS 190 (286)
T ss_dssp SCSCEEEEESCTT-CHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT-C--CEEEEECCGGGCCC-CSCEEEEEE
T ss_pred cCCCcEEEECCCC-CHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHHcC-C--ceEEEEeccccccc-cCCccEEEE
Confidence 5789999999996 666778888 37899999999999999999999988 4 89999999987665 567999998
Q ss_pred ccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+. .++...+++++.++|+|||++++-.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 765543 4677899999999999999976644
No 54
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.53 E-value=5.5e-14 Score=130.20 Aligned_cols=105 Identities=18% Similarity=0.322 Sum_probs=87.6
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..++.+|||||||+ |..+..+++ ..|+++|+|+|+|+.+++.|++.+...+ +++|+++|+.+++.. +.||+|+
T Consensus 42 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~d~~~~~~~-~~fD~v~ 114 (234)
T 3dtn_A 42 DTENPDILDLGAGT-GLLSAFLME-KYPEATFTLVDMSEKMLEIAKNRFRGNL----KVKYIEADYSKYDFE-EKYDMVV 114 (234)
T ss_dssp SCSSCEEEEETCTT-SHHHHHHHH-HCTTCEEEEEESCHHHHHHHHHHTCSCT----TEEEEESCTTTCCCC-SCEEEEE
T ss_pred CCCCCeEEEecCCC-CHHHHHHHH-hCCCCeEEEEECCHHHHHHHHHhhccCC----CEEEEeCchhccCCC-CCceEEE
Confidence 46789999999997 555666767 3679999999999999999999986654 799999999887766 7899999
Q ss_pred eccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 209 LAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 209 iaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+....+. .+++..+++++.++|+|||++++.+
T Consensus 115 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 115 SALSIHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 8765543 3455579999999999999999865
No 55
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.53 E-value=4.7e-14 Score=127.83 Aligned_cols=105 Identities=14% Similarity=0.138 Sum_probs=88.5
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||++.++..+++. ++.+|+|+|+|+++++.|++.+...+ .+++|+++|+.+++...+.||+|++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE---DGYKTYGIEISDLQLKKAENFSRENN---FKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH---TTCEEEEEECCHHHHHHHHHHHHHHT---CCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEECchhhCCCCCCceeEEEE
Confidence 57899999999976555666666 67899999999999999999998877 4799999999887665667999997
Q ss_pred cccc-CC-hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALA-GN-EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALV-gm-~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.... ++ .++...++++++++|+|||++++..
T Consensus 96 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 96 YGTIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 6444 33 4789999999999999999999866
No 56
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.52 E-value=5.4e-14 Score=132.14 Aligned_cols=109 Identities=13% Similarity=0.188 Sum_probs=92.7
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcc
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
...+.++.+|||||||+ |..++.+++ .+.+|+|+|+|+.+++.|++.+...| + .+++|+++|+.+++...+.||
T Consensus 16 ~~~~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~fD 89 (239)
T 1xxl_A 16 TAECRAEHRVLDIGAGA-GHTALAFSP---YVQECIGVDATKEMVEVASSFAQEKG-V-ENVRFQQGTAESLPFPDDSFD 89 (239)
T ss_dssp HHTCCTTCEEEEESCTT-SHHHHHHGG---GSSEEEEEESCHHHHHHHHHHHHHHT-C-CSEEEEECBTTBCCSCTTCEE
T ss_pred HhCcCCCCEEEEEccCc-CHHHHHHHH---hCCEEEEEECCHHHHHHHHHHHHHcC-C-CCeEEEecccccCCCCCCcEE
Confidence 34568899999999996 677778877 34699999999999999999999888 4 589999999988776667899
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|+.....++.++...++.++.++|+|||.+++.+
T Consensus 90 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 90 IITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 99987555444788999999999999999999865
No 57
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.52 E-value=4.2e-14 Score=132.06 Aligned_cols=112 Identities=23% Similarity=0.298 Sum_probs=93.0
Q ss_pred HHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCC
Q 041205 123 LIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLG 202 (535)
Q Consensus 123 L~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~ 202 (535)
+...+.+.++.+|||||||+ |..++.+++++ +++|+|+|+|+++++.|++.+... .+++|+++|+.+.+.+.+
T Consensus 47 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~~~~ 119 (266)
T 3ujc_A 47 ILSDIELNENSKVLDIGSGL-GGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN----NKIIFEANDILTKEFPEN 119 (266)
T ss_dssp HTTTCCCCTTCEEEEETCTT-SHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC----TTEEEEECCTTTCCCCTT
T ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC----CCeEEEECccccCCCCCC
Confidence 33344567889999999995 66777787743 789999999999999999887654 479999999988776667
Q ss_pred CcceEEeccccCCh--hhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 203 EYDCIILAALAGNE--EEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 203 ~FDvVfiaALVgm~--edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.||+|+.....+.. ++...++.++.++|+|||.+++...
T Consensus 120 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 120 NFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 89999987665444 8999999999999999999998763
No 58
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.52 E-value=1.5e-13 Score=129.35 Aligned_cols=155 Identities=17% Similarity=0.246 Sum_probs=112.4
Q ss_pred HHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc
Q 041205 119 EYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK 198 (535)
Q Consensus 119 E~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~ 198 (535)
+...+.....+.++++|||+|||+ |..++.+++...++++|+++|+++++++.|+++++..| +.++++|+++|+.+.
T Consensus 81 ~~~~i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~- 157 (255)
T 3mb5_A 81 DAALIVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG-FDDRVTIKLKDIYEG- 157 (255)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT-CTTTEEEECSCGGGC-
T ss_pred HHHHHHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC-CCCceEEEECchhhc-
Confidence 444555556678899999999997 66667777744678999999999999999999999999 777899999999864
Q ss_pred cCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcccc---------ccccc--CCCCcc---ccCCcEEEE-
Q 041205 199 EKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKG---------ARAFL--YPVVEH---ELFDFKVLS- 263 (535)
Q Consensus 199 ~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~G---------lR~fL--YP~Vdp---dl~GFeil~- 263 (535)
...+.||+|+++. ++...+++++.+.|+|||++++-.+.. ++..- |..+.. ....|++..
T Consensus 158 ~~~~~~D~v~~~~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e~~~r~~~~~~~ 232 (255)
T 3mb5_A 158 IEEENVDHVILDL-----PQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTINVLVFDQEVKKE 232 (255)
T ss_dssp CCCCSEEEEEECS-----SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEECCCCCCEEEETT
T ss_pred cCCCCcCEEEECC-----CCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEEEEeeeeeEecCC
Confidence 3445699999852 356789999999999999999865311 11122 333322 235676653
Q ss_pred EEcCCCcce-e--eeEEEecC
Q 041205 264 IFHPTNDVI-N--SVVLLQLP 281 (535)
Q Consensus 264 v~hP~~eVI-N--SVVvARK~ 281 (535)
..+|....+ + -++++||.
T Consensus 233 ~~rp~~~~~~htg~l~~ark~ 253 (255)
T 3mb5_A 233 CMRPRTTALVHTGYITFARRI 253 (255)
T ss_dssp EEEECSCCCCCSCEEEEEEBC
T ss_pred ccCCCcccccccEEEEEEEEe
Confidence 556665322 2 26777773
No 59
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.51 E-value=8.6e-14 Score=135.07 Aligned_cols=105 Identities=13% Similarity=0.118 Sum_probs=84.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh---------cCC------cCCCeEEEEccc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSS---------DDE------IEKRMKFLTCDI 194 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~---------lG~------Ls~rI~Fi~GDA 194 (535)
.++.+|||||||+ |..+++||+ .|.+|+|||+|+.|++.|++.... .+. ...+|+|+++|+
T Consensus 67 ~~~~~vLD~GCG~-G~~~~~La~---~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 67 QSGLRVFFPLCGK-AIEMKWFAD---RGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp CCSCEEEETTCTT-CTHHHHHHH---TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCCeEEEeCCCC-cHHHHHHHH---CCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 5789999999995 777889998 488999999999999999876541 000 125899999999
Q ss_pred cccccCC-CCcceEEecccc-CC-hhhHHHHHHHHHhhcccCeEEEE
Q 041205 195 MEVKEKL-GEYDCIILAALA-GN-EEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 195 ~el~~dL-~~FDvVfiaALV-gm-~edK~~VL~eL~rvLKPGGvLVv 238 (535)
.+++... +.||+|+..+.. ++ .++...+++++.++|||||++++
T Consensus 143 ~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 143 FDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp TTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred ccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 9887754 689999965433 34 56788999999999999999864
No 60
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.51 E-value=1.1e-13 Score=125.72 Aligned_cols=99 Identities=21% Similarity=0.266 Sum_probs=82.1
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc---ccCCCC-cc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV---KEKLGE-YD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el---~~dL~~-FD 205 (535)
.++.+|||||||+ |..+..+++ .+.+|+|+|+++.+++.|++. + ++.++++|+.++ +...+. ||
T Consensus 51 ~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~----~----~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 51 RQPERVLDLGCGE-GWLLRALAD---RGIEAVGVDGDRTLVDAARAA----G----AGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp TCCSEEEEETCTT-CHHHHHHHT---TTCEEEEEESCHHHHHHHHHT----C----SSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCCEEEEeCCCC-CHHHHHHHH---CCCEEEEEcCCHHHHHHHHHh----c----ccccchhhHHhhcccccccCCCcc
Confidence 5679999999996 667778877 378999999999999999987 3 467889998876 333444 99
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|++....+ .++...++.+++++|+|||++++...
T Consensus 119 ~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 119 LICANFALL-HQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp EEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 999876655 57889999999999999999999764
No 61
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.51 E-value=2e-13 Score=126.43 Aligned_cols=146 Identities=15% Similarity=0.195 Sum_probs=101.5
Q ss_pred CCCCCEEEEEccC-CChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc-cCCCCcce
Q 041205 129 VAQLKKVAFVGSG-PMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK-EKLGEYDC 206 (535)
Q Consensus 129 l~~pkRVLeIGSG-plPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~-~dL~~FDv 206 (535)
+.++.+||||||| + |..++.+|+. . +.+|+|+|+|+++++.|++++...| + +++|+++|+..+. ...+.||+
T Consensus 53 ~~~~~~vLDlG~G~~-G~~~~~la~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~-~--~v~~~~~d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 53 LRGGEVALEIGTGHT-AMMALMAEKF-F-NCKVTATEVDEEFFEYARRNIERNN-S--NVRLVKSNGGIIKGVVEGTFDV 126 (230)
T ss_dssp CCSSCEEEEECCTTT-CHHHHHHHHH-H-CCEEEEEECCHHHHHHHHHHHHHTT-C--CCEEEECSSCSSTTTCCSCEEE
T ss_pred cCCCCEEEEcCCCHH-HHHHHHHHHh-c-CCEEEEEECCHHHHHHHHHHHHHhC-C--CcEEEeCCchhhhhcccCceeE
Confidence 4688999999999 6 6677788874 2 7899999999999999999999998 5 8999999974332 12257999
Q ss_pred EEeccccCC-------------------hhhHHHHHHHHHhhcccCeEEEEEcccccccccCCCC-cc-ccCCcEEEEEE
Q 041205 207 IILAALAGN-------------------EEEKAKILGHIRKYMKEGGVLLVRSAKGARAFLYPVV-EH-ELFDFKVLSIF 265 (535)
Q Consensus 207 VfiaALVgm-------------------~edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~V-dp-dl~GFeil~v~ 265 (535)
|++...... ......+++++.++|+|||++++-..++... ...+ .. .-.||++..+.
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKL--LNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHH--HHHHHHHHHHTTCEEEEEE
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhH--HHHHHHHHHHcCCceEEEE
Confidence 997622211 1335889999999999999998854432100 0001 11 23689876654
Q ss_pred cCCCcceeeeEEEecCC
Q 041205 266 HPTNDVINSVVLLQLPK 282 (535)
Q Consensus 266 hP~~eVINSVVvARK~~ 282 (535)
...+..+..++...|..
T Consensus 205 ~~~g~~~~~~l~f~~~~ 221 (230)
T 3evz_A 205 FKVGTRWRHSLIFFKGI 221 (230)
T ss_dssp ECCCC-CEEEEEEECCC
T ss_pred ecCCCeEEEEEEEeccc
Confidence 44444445566666543
No 62
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.50 E-value=3e-13 Score=119.60 Aligned_cols=116 Identities=22% Similarity=0.290 Sum_probs=94.1
Q ss_pred HHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCC-CeEEEEccccccc
Q 041205 120 YGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEK-RMKFLTCDIMEVK 198 (535)
Q Consensus 120 ~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~-rI~Fi~GDA~el~ 198 (535)
...+...+...++.+|||||||+ |..++.+++. +.+|+|+|+|+++++.|++.+...| +.+ +++|+++|+.+..
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~-G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGY-GVIGIALADE---VKSTTMADINRRAIKLAKENIKLNN-LDNYDIRVVHSDLYENV 115 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTT-SHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTT-CTTSCEEEEECSTTTTC
T ss_pred HHHHHHHcccCCCCeEEEeCCCC-CHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECchhccc
Confidence 34444445557889999999996 6666778772 7899999999999999999999888 544 5999999997633
Q ss_pred cCCCCcceEEeccccCC-hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 199 EKLGEYDCIILAALAGN-EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 199 ~dL~~FDvVfiaALVgm-~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
..+.||+|++....+. ..+...+++++.+.|+|||.+++-..
T Consensus 116 -~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 116 -KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp -TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 3457999998765554 56788999999999999999998764
No 63
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.50 E-value=1e-13 Score=132.88 Aligned_cols=101 Identities=11% Similarity=0.138 Sum_probs=86.1
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCc--CCCeEEEEccccccc---------
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEI--EKRMKFLTCDIMEVK--------- 198 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~L--s~rI~Fi~GDA~el~--------- 198 (535)
.++++||||||| +|++|||+ .++++|++||.|++..+.|++++++.| + .++|+++.||+.+..
T Consensus 29 ~~a~~VLEiGtG---ySTl~lA~--~~~g~VvtvE~d~~~~~~ar~~l~~~g-~~~~~~I~~~~gda~~~~~wg~p~~~~ 102 (202)
T 3cvo_A 29 EEAEVILEYGSG---GSTVVAAE--LPGKHVTSVESDRAWARMMKAWLAANP-PAEGTEVNIVWTDIGPTGDWGHPVSDA 102 (202)
T ss_dssp HHCSEEEEESCS---HHHHHHHT--STTCEEEEEESCHHHHHHHHHHHHHSC-CCTTCEEEEEECCCSSBCGGGCBSSST
T ss_pred hCCCEEEEECch---HHHHHHHH--cCCCEEEEEeCCHHHHHHHHHHHHHcC-CCCCCceEEEEeCchhhhcccccccch
Confidence 468999999995 79999998 348999999999999999999999999 7 789999999976531
Q ss_pred --------------c-CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 199 --------------E-KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 199 --------------~-dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
. ..+.||+||+++.+ ...++..+.+.|+|||+|++++.
T Consensus 103 ~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k-----~~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 103 KWRSYPDYPLAVWRTEGFRHPDVVLVDGRF-----RVGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp TGGGTTHHHHGGGGCTTCCCCSEEEECSSS-----HHHHHHHHHHHCSSCEEEEETTG
T ss_pred hhhhHHHHhhhhhccccCCCCCEEEEeCCC-----chhHHHHHHHhcCCCeEEEEeCC
Confidence 0 12569999999876 24777778899999999999884
No 64
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=5e-14 Score=131.71 Aligned_cols=109 Identities=18% Similarity=0.224 Sum_probs=89.8
Q ss_pred HHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCC
Q 041205 123 LIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLG 202 (535)
Q Consensus 123 L~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~ 202 (535)
+...+...++.+|||||||+ |..+..++++ +|+++|+|+|+|+++++.|++. . .+++|+++|+.+++ ..+
T Consensus 25 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~----~---~~~~~~~~d~~~~~-~~~ 94 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGP-GNSTELLTDR-YGVNVITGIDSDDDMLEKAADR----L---PNTNFGKADLATWK-PAQ 94 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTT-THHHHHHHHH-HCTTSEEEEESCHHHHHHHHHH----S---TTSEEEECCTTTCC-CSS
T ss_pred HHHhcCCCCCCEEEEecCcC-CHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHh----C---CCcEEEECChhhcC-ccC
Confidence 34444557889999999996 5666677773 5789999999999999999987 2 46899999998876 556
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.||+|++....++.++...++.++.++|+|||.+++..+
T Consensus 95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 95 KADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp CEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 799999876665567899999999999999999998653
No 65
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.50 E-value=1.8e-13 Score=125.20 Aligned_cols=107 Identities=17% Similarity=0.188 Sum_probs=86.8
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcc
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
.....++.+|||||||+ |..+..+++ .+.+|+|+|+++++++.|++.+...+ +++|+++|+.+.+ ..+.||
T Consensus 46 ~~~~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~d~~~~~-~~~~fD 116 (216)
T 3ofk_A 46 SLSSGAVSNGLEIGCAA-GAFTEKLAP---HCKRLTVIDVMPRAIGRACQRTKRWS----HISWAATDILQFS-TAELFD 116 (216)
T ss_dssp HTTTSSEEEEEEECCTT-SHHHHHHGG---GEEEEEEEESCHHHHHHHHHHTTTCS----SEEEEECCTTTCC-CSCCEE
T ss_pred HcccCCCCcEEEEcCCC-CHHHHHHHH---cCCEEEEEECCHHHHHHHHHhcccCC----CeEEEEcchhhCC-CCCCcc
Confidence 34456789999999996 666677777 35799999999999999999987644 7999999998876 456799
Q ss_pred eEEeccccCCh---hhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAGNE---EEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVgm~---edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|++....+.. +....++.++.++|+|||++++...
T Consensus 117 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 117 LIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp EEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 99987555432 3346889999999999999998664
No 66
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.50 E-value=3.3e-13 Score=123.46 Aligned_cols=105 Identities=18% Similarity=0.222 Sum_probs=87.0
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..+..+++ .+.+|+|+|+|+++++.|++.+...| .+++|+++|+.+++...+.||+|++
T Consensus 37 ~~~~~vLDlG~G~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 37 KKRGKVLDLACGV-GGFSFLLED---YGFEVVGVDISEDMIRKAREYAKSRE---SNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp CSCCEEEEETCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEEeccC-CHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHhcC---CCceEEECchhcCCCCCCcEEEEEE
Confidence 4589999999997 455577777 24499999999999999999998876 5899999999876655567999998
Q ss_pred ccc--cCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 210 AAL--AGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 210 aAL--Vgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
... ....++...++.++.+.|+|||++++...
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 755 32357788999999999999999988764
No 67
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.50 E-value=2.2e-13 Score=120.57 Aligned_cols=159 Identities=15% Similarity=0.181 Sum_probs=108.1
Q ss_pred ccchhhHHhHHH------HHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc
Q 041205 107 PYYENYVKLAKL------EYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD 180 (535)
Q Consensus 107 pYy~NYv~Lirl------E~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l 180 (535)
.|++.|...... +...+..+ +.++.+|||||||+ |..++.+++ .+.+|+|+|+|+.+++.|++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~~D~~~~~~~~a~~~~--- 88 (195)
T 3cgg_A 18 NYAQRWRNLAAAGNDIYGEARLIDAM--APRGAKILDAGCGQ-GRIGGYLSK---QGHDVLGTDLDPILIDYAKQDF--- 88 (195)
T ss_dssp CHHHHHHHHHHHCCCCCHHHHHHHHH--SCTTCEEEEETCTT-THHHHHHHH---TTCEEEEEESCHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHhccchhhHHHHHHHh--ccCCCeEEEECCCC-CHHHHHHHH---CCCcEEEEcCCHHHHHHHHHhC---
Confidence 344555554442 22344433 36889999999996 666677877 3789999999999999999865
Q ss_pred CCcCCCeEEEEccccccccCCCCcceEEec-cccC-C-hhhHHHHHHHHHhhcccCeEEEEEcccccccccCCCCcc---
Q 041205 181 DEIEKRMKFLTCDIMEVKEKLGEYDCIILA-ALAG-N-EEEKAKILGHIRKYMKEGGVLLVRSAKGARAFLYPVVEH--- 254 (535)
Q Consensus 181 G~Ls~rI~Fi~GDA~el~~dL~~FDvVfia-ALVg-m-~edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~Vdp--- 254 (535)
.+++|+++|+.+.+...+.||+|++. ...+ + .++...++..+.+.|+|||++++....+- .|..-+.
T Consensus 89 ----~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~---~~~~~~~~~~ 161 (195)
T 3cgg_A 89 ----PEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR---GWVFGDFLEV 161 (195)
T ss_dssp ----TTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS---SCCHHHHHHH
T ss_pred ----CCCcEEEcccccCCCCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC---CcCHHHHHHH
Confidence 24789999998766555679999986 3333 3 46779999999999999999998654321 0111111
Q ss_pred -ccCCcEEEEEEcCCC------cceeeeEEEecC
Q 041205 255 -ELFDFKVLSIFHPTN------DVINSVVLLQLP 281 (535)
Q Consensus 255 -dl~GFeil~v~hP~~------eVINSVVvARK~ 281 (535)
...||++.......+ ..-.-++++||+
T Consensus 162 l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 162 AERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp HHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred HHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 236999876654321 122346677763
No 68
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.49 E-value=1.2e-13 Score=129.55 Aligned_cols=106 Identities=17% Similarity=0.134 Sum_probs=85.8
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc--ccCCCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV--KEKLGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el--~~dL~~FDvV 207 (535)
.++.+|||||||+ |..++.+++ ....+|+|||+|+++++.|++.++..| .+++|+++|+.++ +...+.||+|
T Consensus 59 ~~~~~vLDiGcGt-G~~~~~l~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGM-AIAASKVQE--APIDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTT-SHHHHHHHT--SCEEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCeEEEEeccC-CHHHHHHHh--cCCCeEEEEcCCHHHHHHHHHHHHhcC---CCeEEEecCHHHhhcccCCCceEEE
Confidence 5789999999996 666677776 244599999999999999999988877 5799999999887 5555679999
Q ss_pred Eeccc---cC-C-hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAAL---AG-N-EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaAL---Vg-m-~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+++.. .+ . ..++..++.+++++|||||+|++-+.
T Consensus 133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred EECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 98211 11 1 45677899999999999999998664
No 69
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.49 E-value=1.1e-13 Score=126.73 Aligned_cols=106 Identities=20% Similarity=0.277 Sum_probs=88.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCc----CCCeEEEEccccccccCCCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEI----EKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~L----s~rI~Fi~GDA~el~~dL~~FD 205 (535)
.++.+|||||||+ |..++.+++ .+.+|+|+|+++.+++.|++.+...| + ..+++|+++|+.+++...+.||
T Consensus 29 ~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~D 103 (235)
T 3sm3_A 29 QEDDEILDIGCGS-GKISLELAS---KGYSVTGIDINSEAIRLAETAARSPG-LNQKTGGKAEFKVENASSLSFHDSSFD 103 (235)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHTTCCS-CCSSSSCEEEEEECCTTSCCSCTTCEE
T ss_pred CCCCeEEEECCCC-CHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHhcC-CccccCcceEEEEecccccCCCCCcee
Confidence 5789999999996 667778878 37899999999999999999998877 4 3479999999988776667799
Q ss_pred eEEeccccCChhhHH---HHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAALAGNEEEKA---KILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaALVgm~edK~---~VL~eL~rvLKPGGvLVvRs 240 (535)
+|++....+..++.. .+++++.+.|+|||++++..
T Consensus 104 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 104 FAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 999876554333444 99999999999999999864
No 70
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.49 E-value=2.8e-13 Score=119.63 Aligned_cols=108 Identities=19% Similarity=0.217 Sum_probs=90.2
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcc
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
.+.+.++.+|||||||+ |..++.+++. +.+|+++|+|+++++.|++.+...| +..+++|+++|+.+.....+.||
T Consensus 28 ~~~~~~~~~vldiG~G~-G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~D 102 (192)
T 1l3i_A 28 LAEPGKNDVAVDVGCGT-GGVTLELAGR---VRRVYAIDRNPEAISTTEMNLQRHG-LGDNVTLMEGDAPEALCKIPDID 102 (192)
T ss_dssp HHCCCTTCEEEEESCTT-SHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTT-CCTTEEEEESCHHHHHTTSCCEE
T ss_pred hcCCCCCCEEEEECCCC-CHHHHHHHHh---cCEEEEEECCHHHHHHHHHHHHHcC-CCcceEEEecCHHHhcccCCCCC
Confidence 34567899999999997 6777778773 3899999999999999999999988 66799999999977333335799
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|++.... .+...+++.+.+.|+|||.+++...
T Consensus 103 ~v~~~~~~---~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 103 IAVVGGSG---GELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp EEEESCCT---TCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEECCch---HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 99987554 4678999999999999999998654
No 71
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.49 E-value=1.2e-13 Score=132.46 Aligned_cols=109 Identities=19% Similarity=0.269 Sum_probs=80.4
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCC-c----------------------
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDE-I---------------------- 183 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~-L---------------------- 183 (535)
+..++++|||||||+ |.-++.++. .|+ +|+|+|+|+.+++.|++.++.... +
T Consensus 52 ~~~~g~~vLDiGCG~-G~~~~~~~~---~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~ 127 (263)
T 2a14_A 52 GGLQGDTLIDIGSGP-TIYQVLAAC---DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEK 127 (263)
T ss_dssp TSCCEEEEEESSCTT-CCGGGTTGG---GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHH
T ss_pred CCCCCceEEEeCCCc-cHHHHHHHH---hhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhH
Confidence 346789999999998 444445545 454 799999999999999987754320 1
Q ss_pred ----CCCeE-EEEcccccc-cc---CCCCcceEEeccccCC----hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 184 ----EKRMK-FLTCDIMEV-KE---KLGEYDCIILAALAGN----EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 184 ----s~rI~-Fi~GDA~el-~~---dL~~FDvVfiaALVgm----~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..+|. |+++|+.+. +. ..+.||+|+.....+. .++...++.+++++|||||.|++..
T Consensus 128 ~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 128 EEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 01344 999999863 21 2457999998644432 3678899999999999999999986
No 72
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.49 E-value=4.6e-13 Score=125.33 Aligned_cols=104 Identities=22% Similarity=0.430 Sum_probs=85.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..++.+++ .|.+|+|+|+|+++++.|++.+...| + +++|+++|+.+++.+ +.||+|++
T Consensus 40 ~~~~~vLDlGcG~-G~~~~~l~~---~~~~v~gvD~s~~~l~~a~~~~~~~~-~--~v~~~~~d~~~~~~~-~~fD~v~~ 111 (252)
T 1wzn_A 40 REVRRVLDLACGT-GIPTLELAE---RGYEVVGLDLHEEMLRVARRKAKERN-L--KIEFLQGDVLEIAFK-NEFDAVTM 111 (252)
T ss_dssp SCCCEEEEETCTT-CHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT-C--CCEEEESCGGGCCCC-SCEEEEEE
T ss_pred cCCCEEEEeCCCC-CHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHhcC-C--ceEEEECChhhcccC-CCccEEEE
Confidence 5678999999997 566677777 37899999999999999999998877 3 799999999876543 57999996
Q ss_pred c-cc-cCC-hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 210 A-AL-AGN-EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 210 a-AL-Vgm-~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
. +. ... .++...+++++.++|+|||++++...
T Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 112 FFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp CSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 4 22 222 46789999999999999999998643
No 73
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.48 E-value=4e-13 Score=127.08 Aligned_cols=98 Identities=14% Similarity=0.162 Sum_probs=81.1
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..+..+++ .+.+|+|+|+|+++++.|++.+. +++|+++|+.+++. .+.||+|++
T Consensus 49 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~-------~~~~~~~d~~~~~~-~~~fD~v~~ 116 (263)
T 3pfg_A 49 PKAASLLDVACGT-GMHLRHLAD---SFGTVEGLELSADMLAIARRRNP-------DAVLHHGDMRDFSL-GRRFSAVTC 116 (263)
T ss_dssp TTCCEEEEETCTT-SHHHHHHTT---TSSEEEEEESCHHHHHHHHHHCT-------TSEEEECCTTTCCC-SCCEEEEEE
T ss_pred CCCCcEEEeCCcC-CHHHHHHHH---cCCeEEEEECCHHHHHHHHhhCC-------CCEEEECChHHCCc-cCCcCEEEE
Confidence 4679999999996 666677777 36799999999999999998743 58999999988665 467999998
Q ss_pred cc-ccCC---hhhHHHHHHHHHhhcccCeEEEEE
Q 041205 210 AA-LAGN---EEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 210 aA-LVgm---~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
.. .++. .++...+++++.++|+|||+|++.
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 75 4433 257789999999999999999995
No 74
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.48 E-value=1.4e-13 Score=132.89 Aligned_cols=109 Identities=19% Similarity=0.268 Sum_probs=93.3
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCC-CcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcce
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMK-STHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDC 206 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~-Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDv 206 (535)
.+.++.+|||||||+ |..++.+++. ++ +++|+|+|+|+.+++.|++.+...+ . +++|+++|+.+++.+ +.||+
T Consensus 19 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~--~v~~~~~d~~~~~~~-~~fD~ 92 (284)
T 3gu3_A 19 KITKPVHIVDYGCGY-GYLGLVLMPL-LPEGSKYTGIDSGETLLAEARELFRLLP-Y--DSEFLEGDATEIELN-DKYDI 92 (284)
T ss_dssp CCCSCCEEEEETCTT-THHHHHHTTT-SCTTCEEEEEESCHHHHHHHHHHHHSSS-S--EEEEEESCTTTCCCS-SCEEE
T ss_pred ccCCCCeEEEecCCC-CHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHhcC-C--ceEEEEcchhhcCcC-CCeeE
Confidence 457899999999996 7777888873 45 6899999999999999999998877 3 899999999987653 57999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEccc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAK 242 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~ 242 (535)
|++....+..++...++.+++++|+|||.+++..+.
T Consensus 93 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 93 AICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 998766655578899999999999999999987654
No 75
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.48 E-value=1.3e-13 Score=133.53 Aligned_cols=118 Identities=12% Similarity=0.204 Sum_probs=93.4
Q ss_pred HHHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcC--CCeEEEEccc
Q 041205 117 KLEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIE--KRMKFLTCDI 194 (535)
Q Consensus 117 rlE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls--~rI~Fi~GDA 194 (535)
..+...+...+. .++.+|||||||+ |..++.+++ .|.+|+|||+|+.+++.|++.+...| ++ .+++|+++|+
T Consensus 69 ~~~~~~~~~~~~-~~~~~vLDlGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~v~~~~~d~ 142 (299)
T 3g2m_A 69 TSEAREFATRTG-PVSGPVLELAAGM-GRLTFPFLD---LGWEVTALELSTSVLAAFRKRLAEAP-ADVRDRCTLVQGDM 142 (299)
T ss_dssp HHHHHHHHHHHC-CCCSCEEEETCTT-TTTHHHHHT---TTCCEEEEESCHHHHHHHHHHHHTSC-HHHHTTEEEEECBT
T ss_pred cHHHHHHHHhhC-CCCCcEEEEeccC-CHHHHHHHH---cCCeEEEEECCHHHHHHHHHHHhhcc-cccccceEEEeCch
Confidence 344555555554 3456999999996 677778877 37899999999999999999998877 33 6899999999
Q ss_pred cccccCCCCcceEEec-cccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 195 MEVKEKLGEYDCIILA-ALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 195 ~el~~dL~~FDvVfia-ALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.+++. .+.||+|++. ...++ .++...+|+++.++|+|||+|++...
T Consensus 143 ~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 143 SAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp TBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 88765 4679988864 33344 34679999999999999999999764
No 76
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.48 E-value=7.9e-14 Score=136.26 Aligned_cols=108 Identities=19% Similarity=0.286 Sum_probs=84.5
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcC-------------------------
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIE------------------------- 184 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls------------------------- 184 (535)
.++++|||||||+ |..++.+|+ .+++.+|+|||+|+.+++.|++.++..+ ..
T Consensus 45 ~~~~~VLDiGCG~-G~~~~~la~-~~~~~~v~gvDis~~~i~~A~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (292)
T 3g07_A 45 FRGRDVLDLGCNV-GHLTLSIAC-KWGPSRMVGLDIDSRLIHSARQNIRHYL-SEELRLPPQTLEGDPGAEGEEGTTTVR 121 (292)
T ss_dssp TTTSEEEEESCTT-CHHHHHHHH-HTCCSEEEEEESCHHHHHHHHHTC--------------------------------
T ss_pred cCCCcEEEeCCCC-CHHHHHHHH-HcCCCEEEEECCCHHHHHHHHHHHHhhh-hhhcccccccccccccccccccccccc
Confidence 3689999999996 677778887 4678999999999999999999987655 22
Q ss_pred --------------------------------CCeEEEEccccccc-----cCCCCcceEEeccccCC------hhhHHH
Q 041205 185 --------------------------------KRMKFLTCDIMEVK-----EKLGEYDCIILAALAGN------EEEKAK 221 (535)
Q Consensus 185 --------------------------------~rI~Fi~GDA~el~-----~dL~~FDvVfiaALVgm------~edK~~ 221 (535)
.+|+|+++|+.+.. ...+.||+|++.....+ .++..+
T Consensus 122 ~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~ 201 (292)
T 3g07_A 122 KRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKR 201 (292)
T ss_dssp --------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHH
Confidence 58999999987533 23467999998765422 237889
Q ss_pred HHHHHHhhcccCeEEEEEc
Q 041205 222 ILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 222 VL~eL~rvLKPGGvLVvRs 240 (535)
++++++++|+|||+|++..
T Consensus 202 ~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 202 MFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHhCCCcEEEEec
Confidence 9999999999999999964
No 77
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.47 E-value=6.5e-13 Score=140.32 Aligned_cols=153 Identities=15% Similarity=0.165 Sum_probs=111.7
Q ss_pred HHhHhhhhHHHhHhhccCCCccccccCccc--hhhHHhHHHHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCC
Q 041205 80 RAESLLELEFATYLSKISLPLNDLNRFPYY--ENYVKLAKLEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKS 157 (535)
Q Consensus 80 ~AE~~LE~h~A~~Lls~~~pl~~L~~FpYy--~NYv~LirlE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~G 157 (535)
-+..+|..-|.+.+. ++ +.|+.+.-| ..|.++...-+..+...+.+.++++|||||||. |..++.+|.. .+.
T Consensus 124 ~~~~Il~~~Y~r~V~---~~-~~L~~Ye~Fs~~vYGEt~~~~i~~il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~-~g~ 197 (438)
T 3uwp_A 124 LLRHILQQVYNHSVT---DP-EKLNNYEPFSPEVYGETSFDLVAQMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAA-TNC 197 (438)
T ss_dssp HHHHHHHHHHHHHCS---CG-GGSCCCSSSCGGGGGGTHHHHHHHHHHHHCCCTTCEEEEESCTT-SHHHHHHHHH-CCC
T ss_pred HHHHHHHHHHhhcCC---CH-HHhcCcccCCCcccCCCCHHHHHHHHHhcCCCCCCEEEEeCCCC-CHHHHHHHHH-CCC
Confidence 334555555555553 22 345554322 236777766666666767788999999999995 6777788763 333
Q ss_pred cEEEEEeCChhHHHHHHHHH-------hhcCCcC-CCeEEEEccccccccCC--CCcceEEeccccCChhhHHHHHHHHH
Q 041205 158 THFDNIDIDETANNLARRIV-------SSDDEIE-KRMKFLTCDIMEVKEKL--GEYDCIILAALAGNEEEKAKILGHIR 227 (535)
Q Consensus 158 a~VtGIDIDpeAIelAR~li-------~~lG~Ls-~rI~Fi~GDA~el~~dL--~~FDvVfiaALVgm~edK~~VL~eL~ 227 (535)
.+|+|||++++++++|++++ +..| +. .+|+|++||+.++++.. ..||+||+..... .++....|.+++
T Consensus 198 ~kVvGIDiS~~~lelAr~n~e~frkr~~~~G-l~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~ 275 (438)
T 3uwp_A 198 KHHYGVEKADIPAKYAETMDREFRKWMKWYG-KKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAF-GPEVDHQLKERF 275 (438)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHHHHHHHHT-BCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTTC-CHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC-CCCCCeEEEECcccCCccccccCCccEEEEccccc-CchHHHHHHHHH
Confidence 46999999999999999865 3456 43 68999999998876543 4699999865432 378899999999
Q ss_pred hhcccCeEEEEEc
Q 041205 228 KYMKEGGVLLVRS 240 (535)
Q Consensus 228 rvLKPGGvLVvRs 240 (535)
+.|||||+|++-.
T Consensus 276 RvLKPGGrIVssE 288 (438)
T 3uwp_A 276 ANMKEGGRIVSSK 288 (438)
T ss_dssp TTSCTTCEEEESS
T ss_pred HcCCCCcEEEEee
Confidence 9999999999854
No 78
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.47 E-value=3.1e-13 Score=122.48 Aligned_cols=103 Identities=13% Similarity=0.239 Sum_probs=87.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++ +|||||||+ |..+..+++ .|.+|+|+|+|+.+++.|++.+...| + +++|+++|+.+.+...+.||+|++
T Consensus 29 ~~~-~vLdiGcG~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 29 PQG-KILCLAEGE-GRNACFLAS---LGYEVTAVDQSSVGLAKAKQLAQEKG-V--KITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp CSS-EEEECCCSC-THHHHHHHT---TTCEEEEECSSHHHHHHHHHHHHHHT-C--CEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CCC-CEEEECCCC-CHhHHHHHh---CCCeEEEEECCHHHHHHHHHHHHhcC-C--ceEEEEcChhhcCCCcCCccEEEE
Confidence 455 999999996 666678877 37899999999999999999998888 3 899999999887655567999998
Q ss_pred ccccCC-hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 210 AALAGN-EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 210 aALVgm-~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
. ..++ .++...++.++.+.|+|||++++...
T Consensus 101 ~-~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 101 I-FCHLPSSLRQQLYPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp E-CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred E-hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 4 4444 57889999999999999999998763
No 79
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.47 E-value=2.5e-13 Score=129.15 Aligned_cols=108 Identities=17% Similarity=0.094 Sum_probs=89.5
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc-CCCCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE-KLGEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~-dL~~FDvVf 208 (535)
.++.+|||||||++.++ +.+++. +..+|+|+|+++.+++.|++.+...| +..+++|+++|+.+.+. ..+.||+|+
T Consensus 63 ~~~~~vLDiGcG~G~~~-~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~fD~v~ 138 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDL-LKYERA--GIGEYYGVDIAEVSINDARVRARNMK-RRFKVFFRAQDSYGRHMDLGKEFDVIS 138 (298)
T ss_dssp CTTCEEEEETCTTTTTH-HHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSC-CSSEEEEEESCTTTSCCCCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHHH-HHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcC-CCccEEEEECCccccccCCCCCcCEEE
Confidence 67899999999975555 557663 45699999999999999999999888 66789999999987765 346799999
Q ss_pred eccccCC----hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 209 LAALAGN----EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 209 iaALVgm----~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+....+. .++...+++++.++|+|||++++..+
T Consensus 139 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 139 SQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 7654432 57789999999999999999998764
No 80
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.47 E-value=3.7e-13 Score=127.53 Aligned_cols=121 Identities=17% Similarity=0.039 Sum_probs=93.6
Q ss_pred HHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChh------HHHHHHHHHhhcCCcCCCeEEEE
Q 041205 118 LEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDET------ANNLARRIVSSDDEIEKRMKFLT 191 (535)
Q Consensus 118 lE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpe------AIelAR~li~~lG~Ls~rI~Fi~ 191 (535)
.-...+...+.+.++++|||||||+ |..++.++++..++++|+|+|+|++ +++.|++.+...| +..+++|++
T Consensus 30 ~~~~~l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~-~~~~v~~~~ 107 (275)
T 3bkx_A 30 AHRLAIAEAWQVKPGEKILEIGCGQ-GDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP-LGDRLTVHF 107 (275)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTT-SHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST-TGGGEEEEC
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC-CCCceEEEE
Confidence 3344444555668899999999996 6666778774335689999999998 9999999999988 677999999
Q ss_pred cc---ccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 192 CD---IMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 192 GD---A~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+| ...++...+.||+|++....+..++...+++.+.++++|||.+++.+
T Consensus 108 ~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 108 NTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp SCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 98 44455555679999987655444556667777777777799999865
No 81
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.46 E-value=4.4e-13 Score=123.92 Aligned_cols=108 Identities=19% Similarity=0.164 Sum_probs=88.0
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc--cCCCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK--EKLGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~--~dL~~FDvV 207 (535)
.++.+|||||||+ |..++.+|+ ..|+++|+|||+++++++.|++.+...| + .+++|+++|+.+++ ...+.||+|
T Consensus 40 ~~~~~vLDiGcG~-G~~~~~la~-~~p~~~v~gvD~s~~~l~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGK-GAFVSGMAK-QNPDINYIGIDIQKSVLSYALDKVLEVG-V-PNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTT-SHHHHHHHH-HCTTSEEEEEESCHHHHHHHHHHHHHHC-C-SSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccCc-CHHHHHHHH-HCCCCCEEEEEcCHHHHHHHHHHHHHcC-C-CCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 5688999999996 666677877 4678999999999999999999999988 5 78999999998865 344579999
Q ss_pred EeccccCChh--------hHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALAGNEE--------EKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVgm~e--------dK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
++.....+.. ....++..+.++|+|||+|++...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 9864332201 126899999999999999999753
No 82
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.46 E-value=1.8e-13 Score=125.73 Aligned_cols=102 Identities=16% Similarity=0.232 Sum_probs=84.6
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..++.+|||||||+ |..+..+++ .+.+|+|+|+|+++++.|++.+.. +++|+++|+.+. ...+.||+|+
T Consensus 40 ~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~------~v~~~~~d~~~~-~~~~~fD~v~ 108 (250)
T 2p7i_A 40 FFRPGNLLELGSFK-GDFTSRLQE---HFNDITCVEASEEAISHAQGRLKD------GITYIHSRFEDA-QLPRRYDNIV 108 (250)
T ss_dssp GCCSSCEEEESCTT-SHHHHHHTT---TCSCEEEEESCHHHHHHHHHHSCS------CEEEEESCGGGC-CCSSCEEEEE
T ss_pred hcCCCcEEEECCCC-CHHHHHHHH---hCCcEEEEeCCHHHHHHHHHhhhC------CeEEEEccHHHc-CcCCcccEEE
Confidence 35788999999996 666777877 356899999999999999987543 689999999876 3446799999
Q ss_pred eccccCChhhHHHHHHHHH-hhcccCeEEEEEcc
Q 041205 209 LAALAGNEEEKAKILGHIR-KYMKEGGVLLVRSA 241 (535)
Q Consensus 209 iaALVgm~edK~~VL~eL~-rvLKPGGvLVvRsa 241 (535)
+...++..++...+++++. ++|||||.+++..+
T Consensus 109 ~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 109 LTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp EESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 8766654578899999999 99999999998764
No 83
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.46 E-value=3.5e-13 Score=123.15 Aligned_cols=106 Identities=20% Similarity=0.229 Sum_probs=87.3
Q ss_pred HHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCC
Q 041205 124 IENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGE 203 (535)
Q Consensus 124 ~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~ 203 (535)
...+.+.++.+|||||||+ |+.++.+++. +++|+++|+|+++++.|++.++..| + .+++|+++|+.+.....+.
T Consensus 70 ~~~l~~~~~~~vLdiG~G~-G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~ 143 (210)
T 3lbf_A 70 TELLELTPQSRVLEIGTGS-GYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLD-L-HNVSTRHGDGWQGWQARAP 143 (210)
T ss_dssp HHHTTCCTTCEEEEECCTT-SHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEESCGGGCCGGGCC
T ss_pred HHhcCCCCCCEEEEEcCCC-CHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcC-C-CceEEEECCcccCCccCCC
Confidence 3345567899999999996 7777888883 7899999999999999999999998 5 4899999999876655567
Q ss_pred cceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 204 YDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 204 FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
||+|++....+..+ +.+.+.|+|||++++--.
T Consensus 144 ~D~i~~~~~~~~~~------~~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 144 FDAIIVTAAPPEIP------TALMTQLDEGGILVLPVG 175 (210)
T ss_dssp EEEEEESSBCSSCC------THHHHTEEEEEEEEEEEC
T ss_pred ccEEEEccchhhhh------HHHHHhcccCcEEEEEEc
Confidence 99999986664322 268899999999998654
No 84
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.46 E-value=5.2e-13 Score=134.40 Aligned_cols=129 Identities=22% Similarity=0.263 Sum_probs=95.9
Q ss_pred cCccchhhHHhHHHH-----------H-HHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHH
Q 041205 105 RFPYYENYVKLAKLE-----------Y-GALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNL 172 (535)
Q Consensus 105 ~FpYy~NYv~LirlE-----------~-~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIel 172 (535)
.+.||+.|...-..+ + ..+.....+.++++|||||||+ |.-++.+|++ ...+|+|||+++ +++.
T Consensus 26 d~~Y~~~y~~~~~~~~ml~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGt-G~ls~~la~~--g~~~v~gvD~s~-~~~~ 101 (340)
T 2fyt_A 26 DGVYFSSYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGT-GILSMFAAKA--GAKKVLGVDQSE-ILYQ 101 (340)
T ss_dssp ----CCGGGSHHHHHHHHTCHHHHHHHHHHHHHCGGGTTTCEEEEETCTT-SHHHHHHHHT--TCSEEEEEESST-HHHH
T ss_pred hhhHHHhhcchhHHHHHhcCHHHHHHHHHHHHhhhhhcCCCEEEEeeccC-cHHHHHHHHc--CCCEEEEEChHH-HHHH
Confidence 455777776542211 1 3444444457889999999996 5666778772 345999999997 9999
Q ss_pred HHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEeccc---cCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 173 ARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAAL---AGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 173 AR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaAL---Vgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
|++.++..| +.++|+|+++|+.+++.+.+.||+|+.... .........++..+.+.|+|||+++.
T Consensus 102 a~~~~~~~~-~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 102 AMDIIRLNK-LEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp HHHHHHHTT-CTTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred HHHHHHHcC-CCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 999999999 778999999999887666567999997642 11145678899999999999999983
No 85
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.46 E-value=2.9e-13 Score=125.12 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=90.1
Q ss_pred HHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc
Q 041205 121 GALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 121 ~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~ 199 (535)
..+...+...++.+|||||||+ |..+..++++ +. +|+|+|+|+++++.|++.... .+++|+++|+.+++.
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~---~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~d~~~~~~ 103 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGF-GWFCRWAHEH---GASYVLGLDLSEKMLARARAAGPD-----TGITYERADLDKLHL 103 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTT-CHHHHHHHHT---TCSEEEEEESCHHHHHHHHHTSCS-----SSEEEEECCGGGCCC
T ss_pred HHHHHhccccCCCEEEEEcCcC-CHHHHHHHHC---CCCeEEEEcCCHHHHHHHHHhccc-----CCceEEEcChhhccC
Confidence 3455555556889999999996 5566777772 55 999999999999999987543 368999999988765
Q ss_pred CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 200 KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
..+.||+|++....+..++...+++++.++|+|||++++...
T Consensus 104 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 104 PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 556799999876554456889999999999999999998654
No 86
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.46 E-value=9.8e-14 Score=132.65 Aligned_cols=101 Identities=9% Similarity=0.067 Sum_probs=82.4
Q ss_pred CCCCEEEEEccCCChhhHHHHHhh---cCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc---ccCCC-
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQ---HMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV---KEKLG- 202 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~---~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el---~~dL~- 202 (535)
.++.+|||||||+ |+++++||+. ..++++|+|||+++++++.|+ + +..+|+|++||+.+. +...+
T Consensus 80 ~~~~~VLDiG~Gt-G~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~-~~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 80 LRPRTIVELGVYN-GGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------S-DMENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp HCCSEEEEECCTT-SHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------G-GCTTEEEEECCSSCSGGGGGGSSS
T ss_pred cCCCEEEEEeCCC-CHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------c-cCCceEEEECcchhHHHHHhhccC
Confidence 4678999999996 7777888884 257899999999999999887 2 336899999999874 32223
Q ss_pred CcceEEeccccCChhhHHHHHHHHHh-hcccCeEEEEEcc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRK-YMKEGGVLLVRSA 241 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~r-vLKPGGvLVvRsa 241 (535)
.||+|++++.. .+...+|.++.+ +|+|||+|++.+.
T Consensus 152 ~fD~I~~d~~~---~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 152 AHPLIFIDNAH---ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSSEEEEESSC---SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCCEEEECCch---HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 69999998764 477889999997 9999999999763
No 87
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.46 E-value=2e-13 Score=121.62 Aligned_cols=108 Identities=12% Similarity=0.113 Sum_probs=87.0
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc-cCCCCcceE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK-EKLGEYDCI 207 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~-~dL~~FDvV 207 (535)
..++.+|||||||+ |..++.++++ +..+|+|+|+|+++++.|+++++..| +.++++|+++|+.+.. ...+.||+|
T Consensus 29 ~~~~~~vLDlGcG~-G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~fD~i 104 (177)
T 2esr_A 29 YFNGGRVLDLFAGS-GGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTK-AENRFTLLKMEAERAIDCLTGRFDLV 104 (177)
T ss_dssp CCCSCEEEEETCTT-CHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTT-CGGGEEEECSCHHHHHHHBCSCEEEE
T ss_pred hcCCCeEEEeCCCC-CHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECcHHHhHHhhcCCCCEE
Confidence 46789999999996 6666777773 55799999999999999999999998 6678999999998743 233569999
Q ss_pred EeccccCChhhHHHHHHHHH--hhcccCeEEEEEcc
Q 041205 208 ILAALAGNEEEKAKILGHIR--KYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~--rvLKPGGvLVvRsa 241 (535)
+++...+ ......++..+. ++|+|||++++...
T Consensus 105 ~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 105 FLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp EECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 9874431 245677888887 99999999998654
No 88
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.46 E-value=6.2e-13 Score=123.96 Aligned_cols=111 Identities=14% Similarity=0.125 Sum_probs=89.1
Q ss_pred HHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCC
Q 041205 123 LIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLG 202 (535)
Q Consensus 123 L~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~ 202 (535)
+...+...++.+|||||||+ |..+..++++. ..+|+++|+++.+++.|++.+... .+++|+++|+.+++...+
T Consensus 85 ~l~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~~~~ 157 (254)
T 1xtp_A 85 FIASLPGHGTSRALDCGAGI-GRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM----PVGKFILASMETATLPPN 157 (254)
T ss_dssp HHHTSTTCCCSEEEEETCTT-THHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS----SEEEEEESCGGGCCCCSS
T ss_pred HHHhhcccCCCEEEEECCCc-CHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC----CceEEEEccHHHCCCCCC
Confidence 33334446789999999996 55666666632 568999999999999999987654 479999999988766666
Q ss_pred CcceEEeccccCCh--hhHHHHHHHHHhhcccCeEEEEEc
Q 041205 203 EYDCIILAALAGNE--EEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 203 ~FDvVfiaALVgm~--edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.||+|++....+.. ++...++.++.++|+|||++++..
T Consensus 158 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 79999987665443 678999999999999999999876
No 89
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.45 E-value=2.4e-13 Score=138.10 Aligned_cols=111 Identities=15% Similarity=0.196 Sum_probs=92.8
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc-----C-CcCCCeEEEEcccccc-----
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD-----D-EIEKRMKFLTCDIMEV----- 197 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l-----G-~Ls~rI~Fi~GDA~el----- 197 (535)
+.++.+|||||||+ |..++.+++.+.++++|+|+|+++++++.|++.++.. | ....+++|+++|+.++
T Consensus 81 ~~~~~~VLDlGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~ 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGT-GRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP 159 (383)
T ss_dssp GGTTCEEEEESCTT-SHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS
T ss_pred CCCCCEEEEecCcc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc
Confidence 46789999999996 6777888875447899999999999999999998765 3 1126899999999886
Q ss_pred -ccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 198 -KEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 198 -~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+...+.||+|+.....++.+++..++.+++++|||||+|++.+
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 5555679999987666556789999999999999999999865
No 90
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.45 E-value=6.8e-13 Score=129.70 Aligned_cols=106 Identities=17% Similarity=0.238 Sum_probs=88.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..++.+++ .+|+.+|+++|++ .+++.|++.+...| +.++|+|+.+|+.+.+.+ +.||+|++
T Consensus 164 ~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~~-~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~-~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASH-GLFGIAVAQ-HNPNAEIFGVDWA-SVLEVAKENARIQG-VASRYHTIAGSAFEVDYG-NDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTT-CHHHHHHHH-HCTTCEEEEEECH-HHHHHHHHHHHHHT-CGGGEEEEESCTTTSCCC-SCEEEEEE
T ss_pred CCCCEEEEECCCc-CHHHHHHHH-HCCCCeEEEEecH-HHHHHHHHHHHhcC-CCcceEEEecccccCCCC-CCCcEEEE
Confidence 6789999999996 566667777 3688999999999 99999999999988 677899999999765333 34999998
Q ss_pred ccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+. .++..++++++++.|+|||.+++.+
T Consensus 239 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 239 PNFLHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 655543 4667899999999999999887755
No 91
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.45 E-value=3.2e-13 Score=127.85 Aligned_cols=108 Identities=12% Similarity=0.146 Sum_probs=87.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc---cCCCCcce
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK---EKLGEYDC 206 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~---~dL~~FDv 206 (535)
.++.+|||||||+ |..++.+|+ ..|++.|+|||+++++++.|++.++..| + .+++|+++|+.++. .+.+.||.
T Consensus 33 ~~~~~vLDiGcG~-G~~~~~lA~-~~p~~~v~giD~s~~~l~~a~~~~~~~~-l-~nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 33 REAPVTLEIGFGM-GASLVAMAK-DRPEQDFLGIEVHSPGVGACLASAHEEG-L-SNLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp SCCCEEEEESCTT-CHHHHHHHH-HCTTSEEEEECSCHHHHHHHHHHHHHTT-C-SSEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCCeEEEEeeeC-hHHHHHHHH-HCCCCeEEEEEecHHHHHHHHHHHHHhC-C-CcEEEEECCHHHHHHHHcCCCChhe
Confidence 4678999999995 777788888 4788999999999999999999999988 5 57999999998852 34567999
Q ss_pred EEeccccCC--hhh-H-----HHHHHHHHhhcccCeEEEEEcc
Q 041205 207 IILAALAGN--EEE-K-----AKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 207 VfiaALVgm--~ed-K-----~~VL~eL~rvLKPGGvLVvRsa 241 (535)
|++.....+ ... + ..+++.+.++|||||+|++.+.
T Consensus 109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp EEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 997532221 111 1 2599999999999999999764
No 92
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.45 E-value=5.5e-13 Score=127.46 Aligned_cols=115 Identities=14% Similarity=0.213 Sum_probs=90.9
Q ss_pred HHHHHhhCCC-CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc
Q 041205 121 GALIENTGVA-QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 121 ~lL~~~~~l~-~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~ 199 (535)
.++..+..+. ++.+|||||||+ |..++.+|++ ..++|+|||+|+.+++.|++++...| +.++++|+++|+.+...
T Consensus 38 ~ll~~~~~~~~~~~~vLDlG~G~-G~~~~~la~~--~~~~v~gvDi~~~~~~~a~~n~~~~~-~~~~v~~~~~D~~~~~~ 113 (259)
T 3lpm_A 38 VLLAKFSYLPIRKGKIIDLCSGN-GIIPLLLSTR--TKAKIVGVEIQERLADMAKRSVAYNQ-LEDQIEIIEYDLKKITD 113 (259)
T ss_dssp HHHHHHCCCCSSCCEEEETTCTT-THHHHHHHTT--CCCEEEEECCSHHHHHHHHHHHHHTT-CTTTEEEECSCGGGGGG
T ss_pred HHHHHHhcCCCCCCEEEEcCCch-hHHHHHHHHh--cCCcEEEEECCHHHHHHHHHHHHHCC-CcccEEEEECcHHHhhh
Confidence 3444455667 899999999997 6666788773 33499999999999999999999999 78899999999988764
Q ss_pred C--CCCcceEEecccc------CC--------------hhhHHHHHHHHHhhcccCeEEEEE
Q 041205 200 K--LGEYDCIILAALA------GN--------------EEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 200 d--L~~FDvVfiaALV------gm--------------~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
. .+.||+|++..-. +. ..+...+++.+.+.|+|||++++-
T Consensus 114 ~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 114 LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 3 3579999985211 11 134578999999999999999884
No 93
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.45 E-value=3.2e-13 Score=122.48 Aligned_cols=102 Identities=15% Similarity=0.181 Sum_probs=84.2
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
+.++.+|||||||+ |..+..++++ +.+|+|+|+++.+++.|++ .| . .+++|+++|+.++ ...+.||+|+
T Consensus 44 ~~~~~~vLdiG~G~-G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~-~-~~~~~~~~d~~~~-~~~~~~D~v~ 112 (218)
T 3ou2_A 44 GNIRGDVLELASGT-GYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HG-L-DNVEFRQQDLFDW-TPDRQWDAVF 112 (218)
T ss_dssp TTSCSEEEEESCTT-SHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GC-C-TTEEEEECCTTSC-CCSSCEEEEE
T ss_pred CCCCCeEEEECCCC-CHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cC-C-CCeEEEecccccC-CCCCceeEEE
Confidence 56788999999996 6666778773 7899999999999999998 45 2 5799999999876 4556799999
Q ss_pred eccccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 209 LAALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 209 iaALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+....+. .+....+++++.++|+|||.+++...
T Consensus 113 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 113 FAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 8765544 33359999999999999999988753
No 94
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.45 E-value=9.4e-13 Score=131.51 Aligned_cols=113 Identities=20% Similarity=0.279 Sum_probs=91.6
Q ss_pred HHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC
Q 041205 122 ALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL 201 (535)
Q Consensus 122 lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL 201 (535)
.+.......++.+|||||||+ |..++.+++ .+|+.+|+++|+ +.+++.|++.++..| +.++|+|+.+|+.+.+ .
T Consensus 181 ~l~~~~~~~~~~~vLDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~--~ 254 (359)
T 1x19_A 181 LLLEEAKLDGVKKMIDVGGGI-GDISAAMLK-HFPELDSTILNL-PGAIDLVNENAAEKG-VADRMRGIAVDIYKES--Y 254 (359)
T ss_dssp HHHHHCCCTTCCEEEEESCTT-CHHHHHHHH-HCTTCEEEEEEC-GGGHHHHHHHHHHTT-CTTTEEEEECCTTTSC--C
T ss_pred HHHHhcCCCCCCEEEEECCcc-cHHHHHHHH-HCCCCeEEEEec-HHHHHHHHHHHHhcC-CCCCEEEEeCccccCC--C
Confidence 334444567889999999996 566677777 378899999999 999999999999988 7788999999997653 3
Q ss_pred CCcceEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 202 GEYDCIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 202 ~~FDvVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.++|+|++....+. .++..++|+++++.|+|||+|++.+
T Consensus 255 ~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 255 PEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp CCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 44699998766643 3448999999999999999997755
No 95
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.44 E-value=3.5e-13 Score=124.76 Aligned_cols=102 Identities=17% Similarity=0.219 Sum_probs=87.0
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..+..+++ .|++|+|+|+++.+++.|++.. . ..+++|+++|+.+++...+.||+|++
T Consensus 52 ~~~~~vLDiG~G~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~---~--~~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 52 KKEAEVLDVGCGD-GYGTYKLSR---TGYKAVGVDISEVMIQKGKERG---E--GPDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHTTT---C--BTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred CCCCeEEEEcCCC-CHHHHHHHH---cCCeEEEEECCHHHHHHHHhhc---c--cCCceEEEcchhcCCCCCCCccEEEE
Confidence 5789999999996 666777877 3789999999999999999874 2 25799999999987766678999998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+..++...++.++.++|+|||++++..
T Consensus 123 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 123 INSLEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp ESCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 7666555788999999999999999999866
No 96
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.44 E-value=2.8e-13 Score=125.45 Aligned_cols=106 Identities=9% Similarity=0.165 Sum_probs=84.7
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcC-CCeEEEEccccccccC--CCC-cce
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIE-KRMKFLTCDIMEVKEK--LGE-YDC 206 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls-~rI~Fi~GDA~el~~d--L~~-FDv 206 (535)
++.+|||+|||++.+ ++.++.+ ...+|+|||+|+++++.|+++++..| +. ++++|+++|+.+.... .+. ||+
T Consensus 53 ~~~~vLDlGcGtG~~-~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAGSGSL-GFEALSR--QAKKVTFLELDKTVANQLKKNLQTLK-CSSEQAEVINQSSLDFLKQPQNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCTTCHH-HHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTT-CCTTTEEEECSCHHHHTTSCCSSCCEEE
T ss_pred CCCeEEEcCCccCHH-HHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhC-CCccceEEEECCHHHHHHhhccCCCCCE
Confidence 578999999997544 4554452 33699999999999999999999988 64 6899999999876543 357 999
Q ss_pred EEeccccCChhhHHHHHHHH--HhhcccCeEEEEEcc
Q 041205 207 IILAALAGNEEEKAKILGHI--RKYMKEGGVLLVRSA 241 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL--~rvLKPGGvLVvRsa 241 (535)
|+++...+ ..+...++..+ .++|+|||++++...
T Consensus 129 I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 129 VFLDPPFH-FNLAEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp EEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EEECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 99875533 35678899999 668999999988654
No 97
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=1e-13 Score=132.06 Aligned_cols=106 Identities=12% Similarity=0.113 Sum_probs=86.4
Q ss_pred HHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCC
Q 041205 123 LIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLG 202 (535)
Q Consensus 123 L~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~ 202 (535)
+...++..++.+|||||||+ |..++.+++ ++++|+|+|+|+.+++.|++.. +++|+++|+.+++...+
T Consensus 26 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~d~~~~~~~~~ 93 (261)
T 3ege_A 26 IINLLNLPKGSVIADIGAGT-GGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP--------QVEWFTGYAENLALPDK 93 (261)
T ss_dssp HHHHHCCCTTCEEEEETCTT-SHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT--------TEEEECCCTTSCCSCTT
T ss_pred HHHHhCCCCCCEEEEEcCcc-cHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc--------CCEEEECchhhCCCCCC
Confidence 34444557899999999996 677788877 7899999999999988765432 68999999988776667
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.||+|++....+..++...++++++++|| ||.+++-+.
T Consensus 94 ~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 94 SVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp CBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred CEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 89999987666545889999999999999 996666553
No 98
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.44 E-value=7.8e-13 Score=129.01 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=106.4
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|+|||||+ |+-++.+|+ ..+..+|+++|+|+.+++.|+++++..| +.++|+|++||+.+...+...||+|++
T Consensus 20 ~~g~~VlDIGtGs-G~l~i~la~-~~~~~~V~AvDi~~~al~~A~~N~~~~g-l~~~I~~~~gD~l~~~~~~~~~D~Ivi 96 (230)
T 3lec_A 20 PKGARLLDVGSDH-AYLPIFLLQ-MGYCDFAIAGEVVNGPYQSALKNVSEHG-LTSKIDVRLANGLSAFEEADNIDTITI 96 (230)
T ss_dssp CTTEEEEEETCST-THHHHHHHH-TTCEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCch-HHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECchhhccccccccCEEEE
Confidence 5789999999996 777888888 3566799999999999999999999999 888999999999886654346999998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEcccc---cccccCCCCccccCCcEEEEEEc-CCCcceeeeEEEecC
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKG---ARAFLYPVVEHELFDFKVLSIFH-PTNDVINSVVLLQLP 281 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~G---lR~fLYP~Vdpdl~GFeil~v~h-P~~eVINSVVvARK~ 281 (535)
+..-| .--.+++....++++++|.|++-.-.+ +|..++ -.||.+....- -.+.-+..+++++++
T Consensus 97 aGmGg--~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~------~~Gf~i~~E~lv~e~~~~Yeii~~~~~ 164 (230)
T 3lec_A 97 CGMGG--RLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWLA------ANDFEIVAEDILTENDKRYEILVVKHG 164 (230)
T ss_dssp EEECH--HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH------HTTEEEEEEEEEEC--CEEEEEEEEEC
T ss_pred eCCch--HHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHH------HCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 74432 457789999999999999998865332 111121 26999875332 222233457777764
No 99
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.44 E-value=1e-12 Score=122.93 Aligned_cols=110 Identities=18% Similarity=0.314 Sum_probs=84.6
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCC-cEEEEEeCChhHHHHHHHHHhhcCC------------------------
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKS-THFDNIDIDETANNLARRIVSSDDE------------------------ 182 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~G-a~VtGIDIDpeAIelAR~li~~lG~------------------------ 182 (535)
+..++.+|||||||+ |..++.+++ .+ .+|+|+|+++.+++.|++.+...+.
T Consensus 53 ~~~~~~~vLDlGcG~-G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (265)
T 2i62_A 53 GAVKGELLIDIGSGP-TIYQLLSAC---ESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEK 128 (265)
T ss_dssp SSCCEEEEEEESCTT-CCGGGTTGG---GTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHH
T ss_pred cccCCCEEEEECCCc-cHHHHHHhh---cccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHH
Confidence 336789999999997 555566666 34 4999999999999999998866430
Q ss_pred ---cCCCe-EEEEcccccccc-CC---CCcceEEeccccC----ChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 183 ---IEKRM-KFLTCDIMEVKE-KL---GEYDCIILAALAG----NEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 183 ---Ls~rI-~Fi~GDA~el~~-dL---~~FDvVfiaALVg----m~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+..++ +|+++|+.+... .. +.||+|+....++ ..++...++.++.++|+|||+|++...
T Consensus 129 ~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 129 EEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 00138 999999987543 23 5699999865554 346889999999999999999998763
No 100
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.44 E-value=3.9e-13 Score=126.35 Aligned_cols=105 Identities=12% Similarity=0.131 Sum_probs=79.8
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc---ccCCCCc
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV---KEKLGEY 204 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el---~~dL~~F 204 (535)
.+.++++|||||||+ |..+..+|+. .++++|+|||+|+.+++.+.+.++.. .++.++++|+.+. ....+.|
T Consensus 54 ~~~~g~~VLDlGcGt-G~~~~~la~~-~~~~~V~gvD~s~~~l~~~~~~a~~~----~~v~~~~~d~~~~~~~~~~~~~f 127 (210)
T 1nt2_A 54 KLRGDERVLYLGAAS-GTTVSHLADI-VDEGIIYAVEYSAKPFEKLLELVRER----NNIIPLLFDASKPWKYSGIVEKV 127 (210)
T ss_dssp CCCSSCEEEEETCTT-SHHHHHHHHH-TTTSEEEEECCCHHHHHHHHHHHHHC----SSEEEECSCTTCGGGTTTTCCCE
T ss_pred CCCCCCEEEEECCcC-CHHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHhcC----CCeEEEEcCCCCchhhcccccce
Confidence 457889999999997 5666777773 44679999999999988777766653 3689999998763 1112579
Q ss_pred ceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 205 DCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 205 DvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|+|+++... ..+...++.+++++|||||+|++..
T Consensus 128 D~V~~~~~~--~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 128 DLIYQDIAQ--KNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEEECCCS--TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEeccC--hhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 999987322 1344556999999999999998864
No 101
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.44 E-value=1.5e-13 Score=134.16 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=81.8
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
..+.+|||||||+ |..+..|++ .+.+|+|||+|++|++.|++ . .+|+|+++|+.+++.+.+.||+|++
T Consensus 38 ~~~~~vLDvGcGt-G~~~~~l~~---~~~~v~gvD~s~~ml~~a~~-----~---~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 38 PARGDALDCGCGS-GQASLGLAE---FFERVHAVDPGEAQIRQALR-----H---PRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp SCSSEEEEESCTT-TTTHHHHHT---TCSEEEEEESCHHHHHTCCC-----C---TTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred CCCCCEEEEcCCC-CHHHHHHHH---hCCEEEEEeCcHHhhhhhhh-----c---CCceeehhhhhhhcccCCcccEEEE
Confidence 3567999999996 677788887 46899999999999987653 1 4799999999998888788999998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....|+ .+..+++.+++|+|||||+|++-.
T Consensus 106 ~~~~h~-~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 106 AQAMHW-FDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp CSCCTT-CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeehhH-hhHHHHHHHHHHHcCCCCEEEEEE
Confidence 766665 356789999999999999998754
No 102
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.44 E-value=7.6e-13 Score=123.88 Aligned_cols=106 Identities=15% Similarity=0.294 Sum_probs=86.7
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
++.+|||||||+ |..++.++++ . +.+|+|+|+|+.+++.|++.+...| ..+++|+++|+.+++...+.||+|++.
T Consensus 79 ~~~~vLDiGcG~-G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGI-GRITKRLLLP-L-FREVDMVDITEDFLVQAKTYLGEEG--KRVRNYFCCGLQDFTPEPDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTT-THHHHHTTTT-T-CSEEEEEESCHHHHHHHHHHTGGGG--GGEEEEEECCGGGCCCCSSCEEEEEEE
T ss_pred CCCEEEEECCCC-CHHHHHHHHh-c-CCEEEEEeCCHHHHHHHHHHhhhcC--CceEEEEEcChhhcCCCCCCEEEEEEc
Confidence 589999999996 6666777663 2 5799999999999999999988875 257999999998877665679999987
Q ss_pred cccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 211 ALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 211 ALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
...+. .++...++.++.++|+|||++++.+.
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 65543 23456999999999999999998653
No 103
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.43 E-value=7.9e-13 Score=123.64 Aligned_cols=108 Identities=16% Similarity=0.148 Sum_probs=86.9
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc--cCCCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK--EKLGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~--~dL~~FDvV 207 (535)
.++.+|||||||+ |..++.+|+ ..|++.|+|||+++++++.|++.+...| + .+++|+++|+.+++ .+.+.||.|
T Consensus 37 ~~~~~vLDiGcG~-G~~~~~la~-~~p~~~v~giD~s~~~l~~a~~~~~~~~-~-~nv~~~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 37 NDNPIHIEVGTGK-GQFISGMAK-QNPDINYIGIELFKSVIVTAVQKVKDSE-A-QNVKLLNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp SCCCEEEEECCTT-SHHHHHHHH-HCTTSEEEEECSCHHHHHHHHHHHHHSC-C-SSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred CCCceEEEEecCC-CHHHHHHHH-HCCCCCEEEEEechHHHHHHHHHHHHcC-C-CCEEEEeCCHHHHHhhcCcCCcCEE
Confidence 4678999999996 667778888 4689999999999999999999999988 5 67999999998765 344679999
Q ss_pred EeccccCC-hh-------hHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALAGN-EE-------EKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVgm-~e-------dK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
++...-.+ .. ....+++++.++|+|||.|++.+.
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred EEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 87432211 00 136899999999999999998763
No 104
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.43 E-value=8.3e-13 Score=130.31 Aligned_cols=106 Identities=19% Similarity=0.183 Sum_probs=88.4
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..++.+|||||||+ |..++.+++ .+|+.+++++|+ +++++.|++.+...| +.++|+|+.+|..+ +.+. .||+|+
T Consensus 167 ~~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~-~~p~-~~D~v~ 240 (332)
T 3i53_A 167 WAALGHVVDVGGGS-GGLLSALLT-AHEDLSGTVLDL-QGPASAAHRRFLDTG-LSGRAQVVVGSFFD-PLPA-GAGGYV 240 (332)
T ss_dssp CGGGSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCTTS-CCCC-SCSEEE
T ss_pred CCCCCEEEEeCCCh-hHHHHHHHH-HCCCCeEEEecC-HHHHHHHHHhhhhcC-cCcCeEEecCCCCC-CCCC-CCcEEE
Confidence 35678999999996 566667777 478999999999 999999999999988 78899999999863 2222 799999
Q ss_pred eccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 209 LAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 209 iaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+....+. .++..++|+++++.|+|||+|++.+
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 8766654 4446999999999999999998865
No 105
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.43 E-value=7e-13 Score=127.02 Aligned_cols=109 Identities=14% Similarity=0.186 Sum_probs=86.9
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCC--cCCCeEEEEccccccc---cCCCC
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDE--IEKRMKFLTCDIMEVK---EKLGE 203 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~--Ls~rI~Fi~GDA~el~---~dL~~ 203 (535)
..++.+|||||||+ |..++.+++ .|.+|+|+|+|+++++.|++.+...+. ...++.|..+|+.+++ ...+.
T Consensus 55 ~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 130 (293)
T 3thr_A 55 QHGCHRVLDVACGT-GVDSIMLVE---EGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDG 130 (293)
T ss_dssp HTTCCEEEETTCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTC
T ss_pred ccCCCEEEEecCCC-CHHHHHHHH---CCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCC
Confidence 35789999999996 677788888 377999999999999999998754431 1147899999998876 45578
Q ss_pred cceEEec-cccCChhh-------HHHHHHHHHhhcccCeEEEEEcc
Q 041205 204 YDCIILA-ALAGNEEE-------KAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 204 FDvVfia-ALVgm~ed-------K~~VL~eL~rvLKPGGvLVvRsa 241 (535)
||+|++. ...+..++ ...++++++++|+|||++++...
T Consensus 131 fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 131 FDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred eEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9999985 33332244 99999999999999999998654
No 106
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.43 E-value=7.4e-13 Score=120.75 Aligned_cols=109 Identities=17% Similarity=0.124 Sum_probs=86.2
Q ss_pred HHHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccc
Q 041205 117 KLEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIM 195 (535)
Q Consensus 117 rlE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~ 195 (535)
+.+...+..+. .++.+|||||||++.++ ..+ +. +|+|+|+|+++++.|++.. .+++|+++|+.
T Consensus 24 ~~~~~~l~~~~--~~~~~vLdiG~G~G~~~-~~l------~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~ 87 (211)
T 2gs9_A 24 AEEERALKGLL--PPGESLLEVGAGTGYWL-RRL------PYPQKVGVEPSEAMLAVGRRRA-------PEATWVRAWGE 87 (211)
T ss_dssp HHHHHHHHTTC--CCCSEEEEETCTTCHHH-HHC------CCSEEEEECCCHHHHHHHHHHC-------TTSEEECCCTT
T ss_pred HHHHHHHHHhc--CCCCeEEEECCCCCHhH-HhC------CCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcccc
Confidence 34445555443 37899999999975433 332 55 9999999999999999876 25799999998
Q ss_pred ccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 196 EVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 196 el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+++...+.||+|++....+..++...++.++.++|+|||.+++...
T Consensus 88 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 88 ALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp SCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 8776666799999876665557889999999999999999998764
No 107
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.43 E-value=7.8e-13 Score=119.38 Aligned_cols=138 Identities=9% Similarity=0.164 Sum_probs=97.7
Q ss_pred hHHHhHhhccCCCccccccCccchhhHHhHHHHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCC
Q 041205 87 LEFATYLSKISLPLNDLNRFPYYENYVKLAKLEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDID 166 (535)
Q Consensus 87 ~h~A~~Lls~~~pl~~L~~FpYy~NYv~LirlE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDID 166 (535)
.+|-..-....+ ...|.||..|..+.+ .+..+ +.++.+|||||||+ |..++.+++. .+ .+|+|+|+|
T Consensus 8 ~~W~~~y~~~~~----~~~~~~~~~~~~~~~----~l~~~--~~~~~~vLdiGcG~-G~~~~~l~~~-~~-~~v~~~D~s 74 (215)
T 2pxx_A 8 EYWDQRYQGAAD----SAPYDWFGDFSSFRA----LLEPE--LRPEDRILVLGCGN-SALSYELFLG-GF-PNVTSVDYS 74 (215)
T ss_dssp HHHHHHTTTTTT----SCCCCTTCCHHHHHH----HHGGG--CCTTCCEEEETCTT-CSHHHHHHHT-TC-CCEEEEESC
T ss_pred hHHHHHhccCCC----CCCcccccCHHHHHH----HHHHh--cCCCCeEEEECCCC-cHHHHHHHHc-CC-CcEEEEeCC
Confidence 455554433331 134556665554322 12222 26789999999997 6666777773 22 389999999
Q ss_pred hhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEeccccCC---------------hhhHHHHHHHHHhhcc
Q 041205 167 ETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAALAGN---------------EEEKAKILGHIRKYMK 231 (535)
Q Consensus 167 peAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaALVgm---------------~edK~~VL~eL~rvLK 231 (535)
+.+++.|++.+... .+++|+++|+.+++...+.||+|+.....+. ..+...+++++.++|+
T Consensus 75 ~~~~~~a~~~~~~~----~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 150 (215)
T 2pxx_A 75 SVVVAAMQACYAHV----PQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLV 150 (215)
T ss_dssp HHHHHHHHHHTTTC----TTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHhcccC----CCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCc
Confidence 99999999987642 4799999999887655567999997543311 2467899999999999
Q ss_pred cCeEEEEEcc
Q 041205 232 EGGVLLVRSA 241 (535)
Q Consensus 232 PGGvLVvRsa 241 (535)
|||++++...
T Consensus 151 pgG~li~~~~ 160 (215)
T 2pxx_A 151 PGGRFISMTS 160 (215)
T ss_dssp EEEEEEEEES
T ss_pred CCCEEEEEeC
Confidence 9999999775
No 108
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.42 E-value=1.2e-12 Score=127.98 Aligned_cols=107 Identities=19% Similarity=0.254 Sum_probs=83.6
Q ss_pred CCCCEEEEEccCC--ChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc---------
Q 041205 130 AQLKKVAFVGSGP--MPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK--------- 198 (535)
Q Consensus 130 ~~pkRVLeIGSGp--lPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~--------- 198 (535)
....+|||||||+ .|..+..+++ ..|+++|++||+|+.+++.||+.+... .+++|+++|+.+..
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~-~~p~~~v~~vD~sp~~l~~Ar~~~~~~----~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQS-VNPDARVVYVDIDPMVLTHGRALLAKD----PNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHH-HCTTCEEEEEESSHHHHHHHHHHHTTC----TTEEEEECCTTCHHHHHHSHHHH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHH-hCCCCEEEEEECChHHHHHHHHhcCCC----CCeEEEEeeCCCchhhhccchhh
Confidence 3458999999995 0444444444 468999999999999999999988432 57999999997531
Q ss_pred --cCCCCcceEEeccccCChh--hHHHHHHHHHhhcccCeEEEEEcc
Q 041205 199 --EKLGEYDCIILAALAGNEE--EKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 199 --~dL~~FDvVfiaALVgm~e--dK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.+...||+|++...++..+ +...+|+++++.|+|||+|++...
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred ccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 2335799999876665423 489999999999999999998764
No 109
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.42 E-value=7.2e-13 Score=120.14 Aligned_cols=100 Identities=19% Similarity=0.164 Sum_probs=84.4
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
.+.+|||||||+ |..+..+++ .|.+|+|+|+++++++.|++. . .+++|+++|+.+++...+.||+|++.
T Consensus 41 ~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~----~---~~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 41 VDGVILDVGSGT-GRWTGHLAS---LGHQIEGLEPATRLVELARQT----H---PSVTFHHGTITDLSDSPKRWAGLLAW 109 (203)
T ss_dssp CCSCEEEETCTT-CHHHHHHHH---TTCCEEEECCCHHHHHHHHHH----C---TTSEEECCCGGGGGGSCCCEEEEEEE
T ss_pred CCCeEEEecCCC-CHHHHHHHh---cCCeEEEEeCCHHHHHHHHHh----C---CCCeEEeCcccccccCCCCeEEEEeh
Confidence 388999999996 566677777 378999999999999999987 2 36899999999887766789999987
Q ss_pred cccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 211 ALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 211 ALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
...+. .++...+++++.++|+|||.+++...
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 65544 35899999999999999999998764
No 110
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.42 E-value=1.1e-12 Score=133.67 Aligned_cols=108 Identities=16% Similarity=0.223 Sum_probs=89.6
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcce
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDC 206 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDv 206 (535)
....++++|||||||+ |..++.+|++ ...+|+|||++ ++++.|+++++..| +.++|+|+++|+.++..+ +.||+
T Consensus 59 ~~~~~~~~VLDlGcGt-G~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~-~~~D~ 132 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGS-GILAIWSAQA--GARKVYAVEAT-KMADHARALVKANN-LDHIVEVIEGSVEDISLP-EKVDV 132 (376)
T ss_dssp TTTTTTCEEEEESCTT-THHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTT-CTTTEEEEESCGGGCCCS-SCEEE
T ss_pred cccCCCCEEEEeccCc-CHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcC-CCCeEEEEECchhhcCcC-CcceE
Confidence 3457889999999996 6777888882 23499999999 99999999999999 788899999999887655 67999
Q ss_pred EEeccccCC---hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 207 IILAALAGN---EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVgm---~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|+...+.+. ......++..+.+.|+|||+|+...
T Consensus 133 Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 133 IISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 998643322 2568889999999999999998754
No 111
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.42 E-value=1.2e-12 Score=127.10 Aligned_cols=141 Identities=14% Similarity=0.140 Sum_probs=104.7
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|+|||||+ |+-++.+|+ ..+..+|+++|+|+.+++.|+++++..| +.++|+|+++|+.+.......||+|++
T Consensus 14 ~~g~~VlDIGtGs-G~l~i~la~-~~~~~~V~avDi~~~al~~A~~N~~~~g-l~~~i~~~~~d~l~~l~~~~~~D~Ivi 90 (225)
T 3kr9_A 14 SQGAILLDVGSDH-AYLPIELVE-RGQIKSAIAGEVVEGPYQSAVKNVEAHG-LKEKIQVRLANGLAAFEETDQVSVITI 90 (225)
T ss_dssp CTTEEEEEETCST-THHHHHHHH-TTSEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEeCCCc-HHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEECchhhhcccCcCCCEEEE
Confidence 5789999999996 777788888 4667899999999999999999999999 788999999999754332225999998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEccccc---ccccCCCCccccCCcEEEEEEc-CCCcceeeeEEEecC
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGA---RAFLYPVVEHELFDFKVLSIFH-PTNDVINSVVLLQLP 281 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~Gl---R~fLYP~Vdpdl~GFeil~v~h-P~~eVINSVVvARK~ 281 (535)
+.. | ..--.++++...++|+|||.|++-.-.+. |..+ .-.||.+....- -.+.-+..+++++++
T Consensus 91 aG~-G-g~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L------~~~Gf~i~~e~lv~e~~~~Yeii~~~~~ 158 (225)
T 3kr9_A 91 AGM-G-GRLIARILEEGLGKLANVERLILQPNNREDDLRIWL------QDHGFQIVAESILEEAGKFYEILVVEAG 158 (225)
T ss_dssp EEE-C-HHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHH------HHTTEEEEEEEEEEETTEEEEEEEEEES
T ss_pred cCC-C-hHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHH------HHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 643 2 13358899999999999999998543321 1111 226998875332 223344567777764
No 112
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.42 E-value=1.6e-12 Score=119.73 Aligned_cols=99 Identities=13% Similarity=0.196 Sum_probs=79.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..+..++++ +.+|+|+|+|+++++.|++.. .+++|+++|+.+++. .+.||+|++
T Consensus 39 ~~~~~vLdiG~G~-G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACGT-GTHLEHFTKE---FGDTAGLELSEDMLTHARKRL-------PDATLHQGDMRDFRL-GRKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCTT-SHHHHHHHHH---HSEEEEEESCHHHHHHHHHHC-------TTCEEEECCTTTCCC-SSCEEEEEE
T ss_pred CCCCeEEEecccC-CHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhC-------CCCEEEECCHHHccc-CCCCcEEEE
Confidence 5789999999996 5556677773 349999999999999999863 258999999987655 457999994
Q ss_pred -ccccC-C--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 -AALAG-N--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 -aALVg-m--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
...++ + .++...+++++.++|+|||.+++..
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 32332 3 3677899999999999999999964
No 113
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.42 E-value=6.7e-13 Score=133.88 Aligned_cols=107 Identities=19% Similarity=0.253 Sum_probs=88.7
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
+.++++|||||||+ |..++.+|++ +..+|+|||++ ++++.|+++++..| +.++|+|+++|+.+++.+.+.||+|+
T Consensus 64 ~~~~~~VLDvGcG~-G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~Ii 138 (349)
T 3q7e_A 64 LFKDKVVLDVGSGT-GILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANK-LDHVVTIIKGKVEEVELPVEKVDIII 138 (349)
T ss_dssp HHTTCEEEEESCTT-SHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTT-CTTTEEEEESCTTTCCCSSSCEEEEE
T ss_pred cCCCCEEEEEeccc-hHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcC-CCCcEEEEECcHHHccCCCCceEEEE
Confidence 46789999999996 6667888883 45699999999 59999999999999 78889999999998866667899999
Q ss_pred ecccc---CChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 209 LAALA---GNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 209 iaALV---gm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..... ........++..+.++|+|||+++...
T Consensus 139 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 139 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred EccccccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 75321 114678899999999999999997543
No 114
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.42 E-value=9.9e-13 Score=128.30 Aligned_cols=106 Identities=11% Similarity=0.138 Sum_probs=88.5
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc---cCCCC
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK---EKLGE 203 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~---~dL~~ 203 (535)
+.+.++++|||+|||+ |+++..+|+...++++|+|+|+++++++.+++.+++.+ ++.++.+|+.+.. .....
T Consensus 73 l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~----ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 73 LPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR----NIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp CCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT----TEEEEESCTTCGGGGTTTCCC
T ss_pred cCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc----CeeEEEEeccCccccccccce
Confidence 3579999999999995 88889999966789999999999999999999887755 7899999986532 23356
Q ss_pred cceEEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 204 YDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 204 FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+|+||.+...+ .++..++.++.+.|||||.+++-
T Consensus 148 vDvVf~d~~~~--~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 148 VDGLYADVAQP--EQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEEEEECCCCT--THHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEeccCC--hhHHHHHHHHHHhccCCCEEEEE
Confidence 99999764333 68889999999999999998874
No 115
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=2.3e-13 Score=130.39 Aligned_cols=103 Identities=16% Similarity=0.134 Sum_probs=86.0
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcce
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDC 206 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDv 206 (535)
+...++.+|||||||+ |..+..+++ ++++|+|+|+|+.+++.|++.. .+++|+++|+.+++. .+.||+
T Consensus 53 l~~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~fD~ 120 (279)
T 3ccf_A 53 LNPQPGEFILDLGCGT-GQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-------PHLHFDVADARNFRV-DKPLDA 120 (279)
T ss_dssp HCCCTTCEEEEETCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-------TTSCEEECCTTTCCC-SSCEEE
T ss_pred hCCCCCCEEEEecCCC-CHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-------CCCEEEECChhhCCc-CCCcCE
Confidence 3457889999999996 666677777 7899999999999999998864 357899999988765 367999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
|++....+..++...++.++.++|+|||.+++...
T Consensus 121 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 121 VFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEec
Confidence 99876665457889999999999999999998653
No 116
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.41 E-value=1.1e-12 Score=119.61 Aligned_cols=126 Identities=17% Similarity=0.226 Sum_probs=95.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..++.+++ .+..+|+|+|+|+.+++.|++.+...| +.+ ++|+++|+.+.. .+.||+|+.
T Consensus 59 ~~~~~vLDiG~G~-G~~~~~l~~--~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~-v~~~~~d~~~~~--~~~fD~i~~ 131 (205)
T 3grz_A 59 VKPLTVADVGTGS-GILAIAAHK--LGAKSVLATDISDESMTAAEENAALNG-IYD-IALQKTSLLADV--DGKFDLIVA 131 (205)
T ss_dssp SSCCEEEEETCTT-SHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHTT-CCC-CEEEESSTTTTC--CSCEEEEEE
T ss_pred cCCCEEEEECCCC-CHHHHHHHH--CCCCEEEEEECCHHHHHHHHHHHHHcC-CCc-eEEEeccccccC--CCCceEEEE
Confidence 5789999999997 666677877 355699999999999999999999988 544 999999997643 367999998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEcccccccccCCCCcc--ccCCcEEEEEEcCC
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGARAFLYPVVEH--ELFDFKVLSIFHPT 268 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~Vdp--dl~GFeil~v~hP~ 268 (535)
.... .....+++++.+.|+|||++++.....- ....+.. ...||++.......
T Consensus 132 ~~~~---~~~~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~~~~~~Gf~~~~~~~~~ 186 (205)
T 3grz_A 132 NILA---EILLDLIPQLDSHLNEDGQVIFSGIDYL---QLPKIEQALAENSFQIDLKMRAG 186 (205)
T ss_dssp ESCH---HHHHHHGGGSGGGEEEEEEEEEEEEEGG---GHHHHHHHHHHTTEEEEEEEEET
T ss_pred CCcH---HHHHHHHHHHHHhcCCCCEEEEEecCcc---cHHHHHHHHHHcCCceEEeeccC
Confidence 7555 5678999999999999999998532110 0000000 23799987655543
No 117
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.41 E-value=5.3e-13 Score=118.64 Aligned_cols=108 Identities=13% Similarity=0.087 Sum_probs=85.7
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc----CCCCc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE----KLGEY 204 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~----dL~~F 204 (535)
..++.+|||+|||+ |..++.+++ .+..+|+|+|+|+++++.|++++...| +.++++|+++|+.+... ..+.|
T Consensus 42 ~~~~~~vLD~GcG~-G~~~~~~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~f 117 (187)
T 2fhp_A 42 YFDGGMALDLYSGS-GGLAIEAVS--RGMDKSICIEKNFAALKVIKENIAITK-EPEKFEVRKMDANRALEQFYEEKLQF 117 (187)
T ss_dssp CCSSCEEEETTCTT-CHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hcCCCCEEEeCCcc-CHHHHHHHH--cCCCEEEEEECCHHHHHHHHHHHHHhC-CCcceEEEECcHHHHHHHHHhcCCCC
Confidence 35789999999996 555566666 255799999999999999999999988 66789999999987443 14679
Q ss_pred ceEEeccccCChhhHHHHHHHH--HhhcccCeEEEEEcc
Q 041205 205 DCIILAALAGNEEEKAKILGHI--RKYMKEGGVLLVRSA 241 (535)
Q Consensus 205 DvVfiaALVgm~edK~~VL~eL--~rvLKPGGvLVvRsa 241 (535)
|+|+++...+ ......++..+ .++|+|||++++...
T Consensus 118 D~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 118 DLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp EEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 9999874422 23566777777 889999999998654
No 118
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.41 E-value=2.2e-12 Score=128.50 Aligned_cols=109 Identities=19% Similarity=0.212 Sum_probs=88.0
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcce
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDC 206 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDv 206 (535)
..+.++.+|||||||+ |..++.+++ ..++.+++++|+ +.+++.|++.+...| +.++|+|+++|+.+ ..+ ..||+
T Consensus 178 ~~~~~~~~vlDvG~G~-G~~~~~l~~-~~~~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~-~~~-~~~D~ 251 (374)
T 1qzz_A 178 YDWSAVRHVLDVGGGN-GGMLAAIAL-RAPHLRGTLVEL-AGPAERARRRFADAG-LADRVTVAEGDFFK-PLP-VTADV 251 (374)
T ss_dssp SCCTTCCEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCTTS-CCS-CCEEE
T ss_pred CCCCCCCEEEEECCCc-CHHHHHHHH-HCCCCEEEEEeC-HHHHHHHHHHHHhcC-CCCceEEEeCCCCC-cCC-CCCCE
Confidence 3456789999999996 666677777 367899999999 999999999999988 77799999999875 222 24999
Q ss_pred EEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 207 IILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 207 VfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
|++....+. .++..++++++++.|+|||+|++-+.
T Consensus 252 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 998766643 34446999999999999998887543
No 119
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.40 E-value=8e-13 Score=122.32 Aligned_cols=104 Identities=21% Similarity=0.160 Sum_probs=83.4
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCc----CCCeEEEEccccccccCCCCc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEI----EKRMKFLTCDIMEVKEKLGEY 204 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~L----s~rI~Fi~GDA~el~~dL~~F 204 (535)
+.++.+|||||||+ |..+..+++...+.++|+++|+++.+++.|++.+...| + .++++|+++|+.+.....+.|
T Consensus 75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~f 152 (226)
T 1i1n_A 75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDD-PTLLSSGRVQLVVGDGRMGYAEEAPY 152 (226)
T ss_dssp SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC-THHHHTSSEEEEESCGGGCCGGGCCE
T ss_pred CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc-ccccCCCcEEEEECCcccCcccCCCc
Confidence 57889999999997 56666777743355799999999999999999998866 3 368999999997654444679
Q ss_pred ceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 205 DCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 205 DvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|+|++..... .+++++.+.|+|||++++-.
T Consensus 153 D~i~~~~~~~------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 153 DAIHVGAAAP------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EEEEECSBBS------SCCHHHHHTEEEEEEEEEEE
T ss_pred CEEEECCchH------HHHHHHHHhcCCCcEEEEEE
Confidence 9999876652 34568899999999998854
No 120
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.40 E-value=2.9e-13 Score=121.93 Aligned_cols=142 Identities=11% Similarity=0.039 Sum_probs=81.1
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC----CCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK----LGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d----L~~FD 205 (535)
.++.+|||||||+ |..++.+++ ..++++|+|+|+|+.+++.|++++...| + +++|+++|+.+...+ .+.||
T Consensus 29 ~~~~~vLDiG~G~-G~~~~~l~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGS-GCIAVSIAL-ACPGVSVTAVDLSMDALAVARRNAERFG-A--VVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSB-CHHHHHHHH-HCTTEEEEEEECC----------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCH-hHHHHHHHH-hCCCCeEEEEECCHHHHHHHHHHHHHhC-C--ceEEEEcchHhhhhhhhhccCccc
Confidence 6789999999996 667777877 4678999999999999999999999888 4 899999999873322 26799
Q ss_pred eEEeccccC-------C-------------------hhhHHHHHHHHHhhcccCeE-EEEEcccccccccCCCCc-c-c-
Q 041205 206 CIILAALAG-------N-------------------EEEKAKILGHIRKYMKEGGV-LLVRSAKGARAFLYPVVE-H-E- 255 (535)
Q Consensus 206 vVfiaALVg-------m-------------------~edK~~VL~eL~rvLKPGGv-LVvRsa~GlR~fLYP~Vd-p-d- 255 (535)
+|++..... + ...+..+++++.++|+|||+ +++.....- ...+. . .
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~----~~~~~~~l~~ 179 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQ----ADEVARLFAP 179 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSC----HHHHHHHTGG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCcc----HHHHHHHHHH
Confidence 999842110 0 01127899999999999999 665433110 00010 0 2
Q ss_pred -cCCcEEEEEEcCCCcceeeeEEEecC
Q 041205 256 -LFDFKVLSIFHPTNDVINSVVLLQLP 281 (535)
Q Consensus 256 -l~GFeil~v~hP~~eVINSVVvARK~ 281 (535)
..||....+....... ..+++++|.
T Consensus 180 ~~~gf~~~~~~~~~~~~-~r~~~~~~~ 205 (215)
T 4dzr_A 180 WRERGFRVRKVKDLRGI-DRVIAVTRE 205 (215)
T ss_dssp GGGGTEECCEEECTTSC-EEEEEEEEC
T ss_pred hhcCCceEEEEEecCCC-EEEEEEEEc
Confidence 3578665544433323 457777764
No 121
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.40 E-value=1.4e-12 Score=120.59 Aligned_cols=102 Identities=19% Similarity=0.318 Sum_probs=84.5
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..++.+++. .+|+|+|+|+++++.|++.+...| .+++|+++|+.+.+.+ +.||+|++
T Consensus 32 ~~~~~vLdiG~G~-G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~-~~fD~v~~ 102 (243)
T 3d2l_A 32 EPGKRIADIGCGT-GTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN---RHVDFWVQDMRELELP-EPVDAITI 102 (243)
T ss_dssp CTTCEEEEESCTT-CHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCGGGCCCS-SCEEEEEE
T ss_pred CCCCeEEEecCCC-CHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC---CceEEEEcChhhcCCC-CCcCEEEE
Confidence 4679999999997 5666777772 799999999999999999998877 4799999999876654 67999997
Q ss_pred cc-cc-CC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AA-LA-GN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aA-LV-gm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.. .. ++ .++...+++++.++|+|||++++..
T Consensus 103 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 103 LCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 53 22 22 3678899999999999999999854
No 122
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.40 E-value=8.8e-13 Score=134.01 Aligned_cols=142 Identities=15% Similarity=0.234 Sum_probs=100.8
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC--CCcceEEec
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL--GEYDCIILA 210 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL--~~FDvVfia 210 (535)
.+||+||||. |..+..+++ ++|+.+|++||+|+++++.||+.+...+ ..+++++++|+.+..... +.||+|+++
T Consensus 91 ~rVLdIG~G~-G~la~~la~-~~p~~~v~~VEidp~vi~~Ar~~~~~~~--~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 91 LRITHLGGGA-CTMARYFAD-VYPQSRNTVVELDAELARLSREWFDIPR--APRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp CEEEEESCGG-GHHHHHHHH-HSTTCEEEEEESCHHHHHHHHHHSCCCC--TTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CEEEEEECCc-CHHHHHHHH-HCCCcEEEEEECCHHHHHHHHHhccccC--CCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 4999999995 777788877 4688999999999999999999986543 368999999998875443 569999998
Q ss_pred cccCC-hhh---HHHHHHHHHhhcccCeEEEEEcccccccccCCCCcc---cc-CCcEEEEEEc-C----CCcceeeeEE
Q 041205 211 ALAGN-EEE---KAKILGHIRKYMKEGGVLLVRSAKGARAFLYPVVEH---EL-FDFKVLSIFH-P----TNDVINSVVL 277 (535)
Q Consensus 211 ALVgm-~ed---K~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~Vdp---dl-~GFeil~v~h-P----~~eVINSVVv 277 (535)
...+. .+. ..++++.++++|+|||+|++....+.. ++.+.. .+ .-|..+..++ | ...--|.|++
T Consensus 167 ~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~---~~~~~~~~~tL~~vF~~v~~~~~~~~~~g~~~gN~Vl~ 243 (317)
T 3gjy_A 167 VFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSD---LRGAKSELAGMMEVFEHVAVIADPPMLKGRRYGNIILM 243 (317)
T ss_dssp CSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTT---CHHHHHHHHHHHHHCSEEEEEECHHHHTTSSCEEEEEE
T ss_pred CCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcc---hHHHHHHHHHHHHHCCceEEEEecCCCCCCcCceEEEE
Confidence 65432 111 378999999999999999987653211 110100 11 2254333332 2 2245688999
Q ss_pred EecC
Q 041205 278 LQLP 281 (535)
Q Consensus 278 ARK~ 281 (535)
+.+.
T Consensus 244 As~~ 247 (317)
T 3gjy_A 244 GSDT 247 (317)
T ss_dssp EESS
T ss_pred EECC
Confidence 9874
No 123
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.40 E-value=7.3e-13 Score=131.70 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=81.9
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCC-----CeEEEEccc------cccc-
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEK-----RMKFLTCDI------MEVK- 198 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~-----rI~Fi~GDA------~el~- 198 (535)
++.+|||||||+++.+..+++. .+++|+|||+|++|++.|++.....+ ... +++|+++|+ .++.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~---~~~~v~GiD~S~~~l~~A~~~~~~~~-~~~~~~~~~~~f~~~d~~~d~~~~~l~~ 123 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG---EIALLVATDPDADAIARGNERYNKLN-SGIKTKYYKFDYIQETIRSDTFVSSVRE 123 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHC-C----CCCEEEEEECCTTSSSHHHHHHT
T ss_pred CCCeEEEEecCCcHhHHHHHhc---CCCeEEEEECCHHHHHHHHHHHHhcc-ccccccccccchhhhhcccchhhhhhhc
Confidence 5789999999986556555533 46899999999999999999887766 321 277888887 3332
Q ss_pred -cCCCCcceEEeccccCC---hhhHHHHHHHHHhhcccCeEEEEEccc
Q 041205 199 -EKLGEYDCIILAALAGN---EEEKAKILGHIRKYMKEGGVLLVRSAK 242 (535)
Q Consensus 199 -~dL~~FDvVfiaALVgm---~edK~~VL~eL~rvLKPGGvLVvRsa~ 242 (535)
.+.+.||+|++....+. .++...++++++++|||||++++...+
T Consensus 124 ~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 124 VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 23357999986544432 356789999999999999999997754
No 124
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.40 E-value=3.4e-12 Score=112.16 Aligned_cols=106 Identities=14% Similarity=0.150 Sum_probs=87.8
Q ss_pred HHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCC
Q 041205 123 LIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLG 202 (535)
Q Consensus 123 L~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~ 202 (535)
+...+...++.+|||||||+ |..++.+++ ++.+|+|+|+|+.+++.|++.++..| + .+++|+++|+.+ +.+.+
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~~~~~~~d~~~-~~~~~ 99 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGS-GGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFN-I-KNCQIIKGRAED-VLDKL 99 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCC-SHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTT-C-CSEEEEESCHHH-HGGGC
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcC-C-CcEEEEECCccc-cccCC
Confidence 33344557889999999996 666677777 78999999999999999999999998 5 689999999987 33336
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.||+|++... .+...++..+.+. |||.+++...
T Consensus 100 ~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 100 EFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp CCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred CCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEec
Confidence 7999998755 4678999999997 9999998763
No 125
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.40 E-value=9.7e-13 Score=127.00 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=91.4
Q ss_pred HHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh---cCCcCCCeEEEEccccccc
Q 041205 122 ALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSS---DDEIEKRMKFLTCDIMEVK 198 (535)
Q Consensus 122 lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~---lG~Ls~rI~Fi~GDA~el~ 198 (535)
++..++...++.+|||||||+ |..++.+|++ .++.+|+|||+|+++++.|++++.. .| +.++++|+++|+.+..
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~-G~~~l~la~~-~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~-l~~~v~~~~~D~~~~~ 103 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGA-GAAGMAVAAR-LEKAEVTLYERSQEMAEFARRSLELPDNAA-FSARIEVLEADVTLRA 103 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSS-SHHHHHHHHH-CTTEEEEEEESSHHHHHHHHHHTTSGGGTT-TGGGEEEEECCTTCCH
T ss_pred HHHHHhcccCCCEEEEeCChH-hHHHHHHHHh-CCCCeEEEEECCHHHHHHHHHHHHhhhhCC-CcceEEEEeCCHHHHh
Confidence 444555667889999999996 6667788873 6789999999999999999999998 88 7778999999998762
Q ss_pred -------cCCCCcceEEeccccC-----------------C-hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 199 -------EKLGEYDCIILAALAG-----------------N-EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 199 -------~dL~~FDvVfiaALVg-----------------m-~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
...+.||+|++.--.. . ......+++.+.+.|+|||.|++-.
T Consensus 104 ~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 104 KARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 2235799999861110 1 1346789999999999999998743
No 126
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.39 E-value=3e-13 Score=130.18 Aligned_cols=105 Identities=10% Similarity=0.129 Sum_probs=86.5
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||. |.+|+.++. ..|+++|+++|+|+.|+++|+++++..| +..+++| +|..+. ...+.||+|+.
T Consensus 48 ~~~~~VLDlGCG~-GplAl~l~~-~~p~a~~~A~Di~~~~leiar~~~~~~g-~~~~v~~--~d~~~~-~~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGF-NPLALYQWN-ENEKIIYHAYDIDRAEIAFLSSIIGKLK-TTIKYRF--LNKESD-VYKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTT-HHHHHHHHC-SSCCCEEEEECSCHHHHHHHHHHHHHSC-CSSEEEE--ECCHHH-HTTSEEEEEEE
T ss_pred CCCCeEEEecCCC-CHHHHHHHh-cCCCCEEEEEeCCHHHHHHHHHHHHhcC-CCccEEE--eccccc-CCCCCcChhhH
Confidence 5689999999995 566666656 4789999999999999999999999999 6667777 665543 33356999998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
...+|+..+....+..+++.|+|||++|...
T Consensus 122 ~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 122 LKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 8777765777788889999999999999876
No 127
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.39 E-value=9.8e-13 Score=121.81 Aligned_cols=106 Identities=19% Similarity=0.253 Sum_probs=86.5
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcC----CCcEEEEEeCChhHHHHHHHHHhhcCCc----CCCeEEEEccccccc-
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHM----KSTHFDNIDIDETANNLARRIVSSDDEI----EKRMKFLTCDIMEVK- 198 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l----~Ga~VtGIDIDpeAIelAR~li~~lG~L----s~rI~Fi~GDA~el~- 198 (535)
.+.++.+|||||||+ |+.++.+++... ++++|+++|+++++++.|++.++..| + ..+++|+++|+.+..
T Consensus 77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~ 154 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDK-PELLKIDNFKIIHKNIYQVNE 154 (227)
T ss_dssp TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHC-GGGGSSTTEEEEECCGGGCCH
T ss_pred hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcC-ccccccCCEEEEECChHhccc
Confidence 357889999999997 777778888433 56799999999999999999999877 3 468999999998754
Q ss_pred ---cCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 199 ---EKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 199 ---~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
...+.||+|++.+..+ .+++.+.+.|+|||++++-..
T Consensus 155 ~~~~~~~~fD~I~~~~~~~------~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 155 EEKKELGLFDAIHVGASAS------ELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHHHCCEEEEEECSBBS------SCCHHHHHHEEEEEEEEEEEE
T ss_pred ccCccCCCcCEEEECCchH------HHHHHHHHhcCCCcEEEEEEc
Confidence 4446799999887663 246888999999999988654
No 128
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.39 E-value=2.1e-12 Score=120.89 Aligned_cols=113 Identities=18% Similarity=0.153 Sum_probs=92.4
Q ss_pred HHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc-CCcCCCeEEEEcccccccc
Q 041205 121 GALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD-DEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 121 ~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l-G~Ls~rI~Fi~GDA~el~~ 199 (535)
..+...+.+.++++|||+|||+ |..++.+++...++++|+++|+++++++.|++.++.. | ..+++|+++|+.+.+.
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g--~~~v~~~~~d~~~~~~ 162 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ--VENVRFHLGKLEEAEL 162 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC--CCCEEEEESCGGGCCC
T ss_pred HHHHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC--CCCEEEEECchhhcCC
Confidence 3444445668899999999996 6666778774456899999999999999999999887 7 2689999999987644
Q ss_pred CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 200 KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.+.||+|+++ . ++...+++++.+.|+|||.+++-.+
T Consensus 163 ~~~~~D~v~~~--~---~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 163 EEAAYDGVALD--L---MEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp CTTCEEEEEEE--S---SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCcCEEEEC--C---cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 44679999985 2 3566899999999999999998664
No 129
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.38 E-value=7.9e-14 Score=130.26 Aligned_cols=105 Identities=21% Similarity=0.194 Sum_probs=87.7
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..++.+|+ .+.+|+|+|+|+.+++.|+++++..| +..+++|+++|+.+++ ....||+|++
T Consensus 77 ~~~~~vLD~gcG~-G~~~~~la~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~-~~~~~D~v~~ 150 (241)
T 3gdh_A 77 FKCDVVVDAFCGV-GGNTIQFAL---TGMRVIAIDIDPVKIALARNNAEVYG-IADKIEFICGDFLLLA-SFLKADVVFL 150 (241)
T ss_dssp SCCSEEEETTCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHHHG-GGCCCSEEEE
T ss_pred cCCCEEEECcccc-CHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHcC-CCcCeEEEECChHHhc-ccCCCCEEEE
Confidence 4789999999996 666678888 36999999999999999999999999 6678999999998876 3467999998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+...+........+.+++++|+|||++++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 151 SPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 8665543444457778999999999988765
No 130
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.38 E-value=6e-12 Score=122.27 Aligned_cols=144 Identities=13% Similarity=0.133 Sum_probs=94.9
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc--C-CCCc
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE--K-LGEY 204 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~--d-L~~F 204 (535)
.+.++++||||||||+ ..+..+|+...++++|+++|+++.+++...+.+++. .+|.++++|+..... . .+.|
T Consensus 73 ~l~~g~~VLDlG~GtG-~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r----~nv~~i~~Da~~~~~~~~~~~~~ 147 (232)
T 3id6_C 73 PIRKGTKVLYLGAASG-TTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR----PNIFPLLADARFPQSYKSVVENV 147 (232)
T ss_dssp SCCTTCEEEEETCTTS-HHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC----TTEEEEECCTTCGGGTTTTCCCE
T ss_pred CCCCCCEEEEEeecCC-HHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc----CCeEEEEcccccchhhhccccce
Confidence 4689999999999985 455667774557889999999999976555554442 479999999975432 1 2469
Q ss_pred ceEEeccccCChhhHHHHHH-HHHhhcccCeEEEEEcccc-cccccCCC--Ccc-----ccCCcEEEEEEc--CCCccee
Q 041205 205 DCIILAALAGNEEEKAKILG-HIRKYMKEGGVLLVRSAKG-ARAFLYPV--VEH-----ELFDFKVLSIFH--PTNDVIN 273 (535)
Q Consensus 205 DvVfiaALVgm~edK~~VL~-eL~rvLKPGGvLVvRsa~G-lR~fLYP~--Vdp-----dl~GFeil~v~h--P~~eVIN 273 (535)
|+||.+... ++..+++. .+.+.|||||.|++--..+ ...-..|. ... .-.||++..... |...- .
T Consensus 148 D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~-h 223 (232)
T 3id6_C 148 DVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKD-H 223 (232)
T ss_dssp EEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSS-C
T ss_pred EEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCc-e
Confidence 999988554 45555554 5555999999998753211 11112221 111 125899987555 66432 4
Q ss_pred eeEEEec
Q 041205 274 SVVLLQL 280 (535)
Q Consensus 274 SVVvARK 280 (535)
.+|++|+
T Consensus 224 ~~v~~~~ 230 (232)
T 3id6_C 224 AIVLSKY 230 (232)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5777776
No 131
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.38 E-value=1.8e-12 Score=123.61 Aligned_cols=116 Identities=17% Similarity=0.212 Sum_probs=93.2
Q ss_pred HHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc-CCcCCCeEEEEccccccc
Q 041205 120 YGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD-DEIEKRMKFLTCDIMEVK 198 (535)
Q Consensus 120 ~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l-G~Ls~rI~Fi~GDA~el~ 198 (535)
...+...+.+.++.+|||||||+ |..++.+++...++.+|+++|+++++++.|+++++.. |.+..+++|+++|+.+.+
T Consensus 88 ~~~i~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 88 AAQIVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHHcCCCCCCEEEEEcccc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 34444455668899999999996 6666677774456899999999999999999999887 423478999999998775
Q ss_pred cCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 199 EKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 199 ~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.+.+.||+|+++. ++...+++++.+.|+|||++++-.+
T Consensus 167 ~~~~~~D~v~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 167 LPDGSVDRAVLDM-----LAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CCTTCEEEEEEES-----SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCceeEEEECC-----cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 5556799999842 2456899999999999999999764
No 132
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.38 E-value=2.1e-12 Score=130.06 Aligned_cols=106 Identities=11% Similarity=0.149 Sum_probs=89.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc--ccCCCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV--KEKLGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el--~~dL~~FDvV 207 (535)
..+.+|||||||+ |..++.+++ .+|+.+|+++|+ +++++.|++.+...| +.++|+|+.+|..+. +.+ +.||+|
T Consensus 178 ~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~p-~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNT-GKWATQCVQ-YNKEVEVTIVDL-PQQLEMMRKQTAGLS-GSERIHGHGANLLDRDVPFP-TGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTT-CHHHHHHHH-HSTTCEEEEEEC-HHHHHHHHHHHTTCT-TGGGEEEEECCCCSSSCCCC-CCCSEE
T ss_pred cCCCEEEEeCCCc-CHHHHHHHH-hCCCCEEEEEeC-HHHHHHHHHHHHhcC-cccceEEEEccccccCCCCC-CCcCEE
Confidence 4679999999996 667777777 478999999999 999999999999988 778999999999764 223 579999
Q ss_pred EeccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 208 ILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 208 fiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
++....+. .++..++|+++++.|+|||+|++.+
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 253 WMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 98776653 4566799999999999999998865
No 133
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.38 E-value=1.7e-12 Score=120.19 Aligned_cols=105 Identities=8% Similarity=0.061 Sum_probs=83.2
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc-CCCCcceEEe
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE-KLGEYDCIIL 209 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~-dL~~FDvVfi 209 (535)
++.+|||+|||+ |..++.++.+ ...+|+|||+|+++++.|+++++..| + .+++|+++|+.+... ..+.||+||+
T Consensus 54 ~~~~vLDlgcG~-G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~~~-~-~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGS-GALGLEALSR--YAAGATLIEMDRAVSQQLIKNLATLK-A-GNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTT-CHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTT-C-CSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCc-CHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 578999999996 5556665552 23599999999999999999999998 5 789999999987433 3356999998
Q ss_pred ccccCChhhHHHHHHHHHh--hcccCeEEEEEcc
Q 041205 210 AALAGNEEEKAKILGHIRK--YMKEGGVLLVRSA 241 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~r--vLKPGGvLVvRsa 241 (535)
+...+ ......+++.+.+ +|+|||+|++...
T Consensus 129 ~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 129 DPPFR-RGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp CCSSS-TTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCCC-CCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 75532 2567788888876 5999999988653
No 134
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=3.2e-12 Score=117.12 Aligned_cols=110 Identities=19% Similarity=0.136 Sum_probs=86.4
Q ss_pred HHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCC
Q 041205 123 LIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLG 202 (535)
Q Consensus 123 L~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~ 202 (535)
+...+.+.++.+|||||||+ |..++.+++...++.+|+++|+|+++++.|++.+...| + .+++|+++|+.+.....+
T Consensus 69 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~ 145 (215)
T 2yxe_A 69 MCELLDLKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG-Y-DNVIVIVGDGTLGYEPLA 145 (215)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT-C-TTEEEEESCGGGCCGGGC
T ss_pred HHHhhCCCCCCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CCeEEEECCcccCCCCCC
Confidence 33344567899999999996 67777787743355899999999999999999999888 4 469999999865333345
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.||+|++....+... +++.+.|+|||++++-..
T Consensus 146 ~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 146 PYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp CEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred CeeEEEECCchHHHH------HHHHHHcCCCcEEEEEEC
Confidence 799999886664322 488999999999988654
No 135
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.38 E-value=7.3e-13 Score=123.95 Aligned_cols=99 Identities=14% Similarity=0.162 Sum_probs=80.7
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc--ccCCCCcce
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV--KEKLGEYDC 206 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el--~~dL~~FDv 206 (535)
+.++.+|||||||+ |..+..+++ .|++|+|||+|+++++.|++. ++|+++|+.+. +...+.||+
T Consensus 39 ~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~----------~~~~~~d~~~~~~~~~~~~fD~ 104 (240)
T 3dli_A 39 FKGCRRVLDIGCGR-GEFLELCKE---EGIESIGVDINEDMIKFCEGK----------FNVVKSDAIEYLKSLPDKYLDG 104 (240)
T ss_dssp TTTCSCEEEETCTT-THHHHHHHH---HTCCEEEECSCHHHHHHHHTT----------SEEECSCHHHHHHTSCTTCBSE
T ss_pred hcCCCeEEEEeCCC-CHHHHHHHh---CCCcEEEEECCHHHHHHHHhh----------cceeeccHHHHhhhcCCCCeeE
Confidence 46789999999997 555677877 378999999999999998865 68899999875 334467999
Q ss_pred EEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 207 IILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 207 VfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
|+.....+. .++...++.++.++|||||++++...
T Consensus 105 i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 105 VMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp EEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred EEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 998766543 44679999999999999999998764
No 136
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.38 E-value=1.3e-12 Score=119.46 Aligned_cols=100 Identities=18% Similarity=0.199 Sum_probs=83.2
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
+.++.+|||||||+ |..+..+++ .+.+|+|+|+|+++++.|++.+ + ++++++|+.+++ ..+.||+|+
T Consensus 41 ~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~---~-----~~~~~~d~~~~~-~~~~fD~v~ 107 (211)
T 3e23_A 41 LPAGAKILELGCGA-GYQAEAMLA---AGFDVDATDGSPELAAEASRRL---G-----RPVRTMLFHQLD-AIDAYDAVW 107 (211)
T ss_dssp SCTTCEEEESSCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHH---T-----SCCEECCGGGCC-CCSCEEEEE
T ss_pred cCCCCcEEEECCCC-CHHHHHHHH---cCCeEEEECCCHHHHHHHHHhc---C-----CceEEeeeccCC-CCCcEEEEE
Confidence 46789999999996 666677877 3789999999999999999886 3 567889998776 556799999
Q ss_pred eccccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 209 LAALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 209 iaALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+...++. .++...++.++.++|+|||++++...
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 108 AHACLLHVPRDELADVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 8765543 45888999999999999999998754
No 137
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.38 E-value=4.8e-12 Score=125.72 Aligned_cols=108 Identities=19% Similarity=0.287 Sum_probs=87.6
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcce
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDC 206 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDv 206 (535)
....++.+|||||||+ |..++.+++ ..++.+++++|+ +++++.|++.+...| +.++|+|+++|+.+. .+ ..||+
T Consensus 179 ~~~~~~~~vLDvG~G~-G~~~~~l~~-~~~~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~-~~-~~~D~ 252 (360)
T 1tw3_A 179 YDWTNVRHVLDVGGGK-GGFAAAIAR-RAPHVSATVLEM-AGTVDTARSYLKDEG-LSDRVDVVEGDFFEP-LP-RKADA 252 (360)
T ss_dssp SCCTTCSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-TTHHHHHHHHHHHTT-CTTTEEEEECCTTSC-CS-SCEEE
T ss_pred CCCccCcEEEEeCCcC-cHHHHHHHH-hCCCCEEEEecC-HHHHHHHHHHHHhcC-CCCceEEEeCCCCCC-CC-CCccE
Confidence 3456789999999996 566677777 367899999999 999999999999988 777999999998752 22 24999
Q ss_pred EEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 207 IILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|++...++. .++..++++++++.|+|||+|++-+
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 998766643 3344799999999999999888754
No 138
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.37 E-value=2.7e-12 Score=130.18 Aligned_cols=109 Identities=17% Similarity=0.321 Sum_probs=88.1
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc--CCc-CCCeEEEEccccccccC--CCC
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD--DEI-EKRMKFLTCDIMEVKEK--LGE 203 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l--G~L-s~rI~Fi~GDA~el~~d--L~~ 203 (535)
...+++||+||||. |..++.+++ +.++.+|++||+|+++++.|++.+... | + ..+++|+++|+.+.... .+.
T Consensus 118 ~~~~~~VLdIG~G~-G~~a~~la~-~~~~~~V~~VDis~~~l~~Ar~~~~~~~~g-l~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 118 IPNPKKVLVIGGGD-GGVLREVAR-HASIEQIDMCEIDKMVVDVSKQFFPDVAIG-YEDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp SSCCCEEEEETCSS-SHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGSTTEEEEESCHHHHHHTSCTTC
T ss_pred CCCCCEEEEECCCc-cHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHHHhhccc-cCCCcEEEEECCHHHHHHhccCCC
Confidence 36789999999995 778888888 466789999999999999999998763 4 4 36899999999876433 356
Q ss_pred cceEEeccccCC-hhh---HHHHHHHHHhhcccCeEEEEEc
Q 041205 204 YDCIILAALAGN-EEE---KAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 204 FDvVfiaALVgm-~ed---K~~VL~eL~rvLKPGGvLVvRs 240 (535)
||+|+++..... ..+ ...+++.+.++|+|||+|++..
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999999765322 122 5899999999999999999974
No 139
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.37 E-value=1.1e-12 Score=127.15 Aligned_cols=108 Identities=12% Similarity=0.186 Sum_probs=81.7
Q ss_pred CCCCEEEEEccCCChhhHHHH---HhhcCCCcEE--EEEeCChhHHHHHHHHHhhc-CCcCCCe--EEEEccccccc---
Q 041205 130 AQLKKVAFVGSGPMPLTSIIL---ASQHMKSTHF--DNIDIDETANNLARRIVSSD-DEIEKRM--KFLTCDIMEVK--- 198 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~L---Ak~~l~Ga~V--tGIDIDpeAIelAR~li~~l-G~Ls~rI--~Fi~GDA~el~--- 198 (535)
.++.+|||||||++.+|..++ +.+ .++++| +|+|.|++|++.|++.+... | + .++ .|..+++.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~-~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~-~-~~v~~~~~~~~~~~~~~~~ 127 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQ-YPGVCINNEVVEPSAEQIAKYKELVAKTSN-L-ENVKFAWHKETSSEYQSRM 127 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHH-STTCEEEEEEECSCHHHHHHHHHHHHTCSS-C-TTEEEEEECSCHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhh-CCCceeeEEEEeCCHHHHHHHHHHHHhccC-C-CcceEEEEecchhhhhhhh
Confidence 567899999999865554222 221 367755 99999999999999998765 4 3 445 45577776544
Q ss_pred ---cCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 199 ---EKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 199 ---~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+..+.||+|++....++.++...+|++++++|||||.+++-.
T Consensus 128 ~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp HTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 234679999988666666889999999999999999998753
No 140
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.37 E-value=7.7e-13 Score=121.79 Aligned_cols=107 Identities=14% Similarity=0.085 Sum_probs=80.4
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHH----HHHHhhcCCcCCCeEEEEccccccccCCCCc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLA----RRIVSSDDEIEKRMKFLTCDIMEVKEKLGEY 204 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelA----R~li~~lG~Ls~rI~Fi~GDA~el~~dL~~F 204 (535)
..++.+|||||||+ |..++.+|+ ..|+++|+|||+|+++++.+ ++.....| + .+++|+++|+.+++...+.
T Consensus 25 ~~~~~~vLDiGcG~-G~~~~~la~-~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~l~~~~~~- 99 (218)
T 3mq2_A 25 SQYDDVVLDVGTGD-GKHPYKVAR-QNPSRLVVALDADKSRMEKISAKAAAKPAKGG-L-PNLLYLWATAERLPPLSGV- 99 (218)
T ss_dssp TTSSEEEEEESCTT-CHHHHHHHH-HCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC-C-TTEEEEECCSTTCCSCCCE-
T ss_pred ccCCCEEEEecCCC-CHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC-C-CceEEEecchhhCCCCCCC-
Confidence 36789999999996 677777888 47899999999999988853 33344456 3 5899999999987765544
Q ss_pred ceEEeccccC-----ChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 205 DCIILAALAG-----NEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 205 DvVfiaALVg-----m~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|.|++....+ +.++...++.+++++|||||++++..
T Consensus 100 d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 100 GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 7776322110 12345899999999999999999853
No 141
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.37 E-value=4.1e-12 Score=121.72 Aligned_cols=108 Identities=12% Similarity=0.181 Sum_probs=83.0
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh------cCCcCCCeEEEEccccc-cc--cC
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSS------DDEIEKRMKFLTCDIME-VK--EK 200 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~------lG~Ls~rI~Fi~GDA~e-l~--~d 200 (535)
.++.+|||||||. |..++.||+ ..|++.|+|||+++.+++.|++.++. .+ + .+|+|+++|+.+ ++ .+
T Consensus 45 ~~~~~vLDiGcG~-G~~~~~la~-~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~-~-~nv~~~~~d~~~~l~~~~~ 120 (235)
T 3ckk_A 45 QAQVEFADIGCGY-GGLLVELSP-LFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGG-F-QNIACLRSNAMKHLPNFFY 120 (235)
T ss_dssp -CCEEEEEETCTT-CHHHHHHGG-GSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCC-C-TTEEEEECCTTTCHHHHCC
T ss_pred CCCCeEEEEccCC-cHHHHHHHH-HCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcC-C-CeEEEEECcHHHhhhhhCC
Confidence 5678999999995 677788888 46889999999999999999988764 34 3 689999999987 44 34
Q ss_pred CCCcceEEeccccCC-h--hhH-----HHHHHHHHhhcccCeEEEEEcc
Q 041205 201 LGEYDCIILAALAGN-E--EEK-----AKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 201 L~~FDvVfiaALVgm-~--edK-----~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.+.||.|++...-.+ . ..| ..+++++.++|+|||.|++.+.
T Consensus 121 ~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 121 KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp TTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 567999987432211 0 011 4799999999999999998764
No 142
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.36 E-value=2.9e-12 Score=128.05 Aligned_cols=105 Identities=21% Similarity=0.314 Sum_probs=85.7
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..++++|||||||+ |..++.+|++ +..+|+|+|++ .+++.|++.++..| +.++|+|+++|+.+++.+.+.||+|+
T Consensus 36 ~~~~~~VLDiGcGt-G~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~-~~~~i~~~~~d~~~~~~~~~~~D~Iv 110 (328)
T 1g6q_1 36 LFKDKIVLDVGCGT-GILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNG-FSDKITLLRGKLEDVHLPFPKVDIII 110 (328)
T ss_dssp HHTTCEEEEETCTT-SHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTT-CTTTEEEEESCTTTSCCSSSCEEEEE
T ss_pred hcCCCEEEEecCcc-HHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcC-CCCCEEEEECchhhccCCCCcccEEE
Confidence 45789999999996 5666778772 34599999999 59999999999999 78899999999988766556799999
Q ss_pred eccccC---ChhhHHHHHHHHHhhcccCeEEEE
Q 041205 209 LAALAG---NEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 209 iaALVg---m~edK~~VL~eL~rvLKPGGvLVv 238 (535)
...... .......++..+.+.|+|||+++.
T Consensus 111 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 111 SEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 763211 134577899999999999999974
No 143
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.36 E-value=2.2e-12 Score=125.90 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=89.7
Q ss_pred HHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc
Q 041205 119 EYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK 198 (535)
Q Consensus 119 E~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~ 198 (535)
+...+... +.++++|||+|||+ |.-++.+|+. .. .+|+|+|+|+.+++.|+++++..| +.++++|+++|+.+++
T Consensus 115 ~~~~l~~~--~~~~~~VLDlgcG~-G~~~~~la~~-~~-~~V~~vD~s~~~~~~a~~n~~~n~-~~~~v~~~~~D~~~~~ 188 (278)
T 2frn_A 115 ERVRMAKV--AKPDELVVDMFAGI-GHLSLPIAVY-GK-AKVIAIEKDPYTFKFLVENIHLNK-VEDRMSAYNMDNRDFP 188 (278)
T ss_dssp HHHHHHHH--CCTTCEEEETTCTT-TTTHHHHHHH-TC-CEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCTTTCC
T ss_pred HHHHHHHh--CCCCCEEEEecccC-CHHHHHHHHh-CC-CEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEECCHHHhc
Confidence 44444433 25789999999996 5556777773 22 279999999999999999999999 7778999999998876
Q ss_pred cCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 199 EKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 199 ~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
. .+.||+|+++... ....++..+.+.|+|||++++.+.
T Consensus 189 ~-~~~fD~Vi~~~p~----~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 189 G-ENIADRILMGYVV----RTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp C-CSCEEEEEECCCS----SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred c-cCCccEEEECCch----hHHHHHHHHHHHCCCCeEEEEEEe
Confidence 6 4579999996443 457899999999999999998764
No 144
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.36 E-value=2.1e-12 Score=129.87 Aligned_cols=109 Identities=18% Similarity=0.266 Sum_probs=84.7
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc--CCc-CCCeEEEEcccccccc-CCCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD--DEI-EKRMKFLTCDIMEVKE-KLGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l--G~L-s~rI~Fi~GDA~el~~-dL~~FD 205 (535)
..+++||+||||. |.+++.+++ +.++.+|++||+|+++++.|++.+... | + ..+++++++|+.+... ..+.||
T Consensus 107 ~~~~~VLdIG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~-~~~~rv~~~~~D~~~~l~~~~~~fD 183 (314)
T 2b2c_A 107 PDPKRVLIIGGGD-GGILREVLK-HESVEKVTMCEIDEMVIDVAKKFLPGMSCG-FSHPKLDLFCGDGFEFLKNHKNEFD 183 (314)
T ss_dssp SSCCEEEEESCTT-SHHHHHHTT-CTTCCEEEEECSCHHHHHHHHHHCTTTSGG-GGCTTEEEECSCHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCc-CHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHHHHhccc-cCCCCEEEEEChHHHHHHhcCCCce
Confidence 5679999999995 778888887 567899999999999999999998765 4 4 4789999999987433 335699
Q ss_pred eEEeccccCChhhH----HHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAGNEEEK----AKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVgm~edK----~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|++++.-+..+.+ .++++.+.++|+|||++++...
T Consensus 184 ~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 184 VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp EEEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 99998643221122 7899999999999999999763
No 145
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.36 E-value=8.7e-13 Score=115.33 Aligned_cols=102 Identities=12% Similarity=0.137 Sum_probs=81.4
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC----CCCcce
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK----LGEYDC 206 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d----L~~FDv 206 (535)
++.+|||+|||+ |..++.+++ .+..|+|+|+|+++++.|++++...| + +++|+++|+.+.... ...||+
T Consensus 41 ~~~~vLD~GcG~-G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGS-GAVGLEAAS---EGWEAVLVEKDPEAVRLLKENVRRTG-L--GARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSS-CHHHHHHHH---TTCEEEEECCCHHHHHHHHHHHHHHT-C--CCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCc-CHHHHHHHH---CCCeEEEEeCCHHHHHHHHHHHHHcC-C--ceEEEeccHHHHHHhhhccCCceEE
Confidence 688999999996 666778877 35569999999999999999999988 5 899999999874321 236999
Q ss_pred EEeccccCChhhHHHHHHHHH--hhcccCeEEEEEcc
Q 041205 207 IILAALAGNEEEKAKILGHIR--KYMKEGGVLLVRSA 241 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~--rvLKPGGvLVvRsa 241 (535)
|+++...+ .....+++.+. ++|+|||++++...
T Consensus 114 i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 114 AFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp EEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred EEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 99875443 34556677777 99999999988653
No 146
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.36 E-value=1.6e-12 Score=125.51 Aligned_cols=112 Identities=20% Similarity=0.142 Sum_probs=88.1
Q ss_pred HHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc-CCcCCCeEEEEcccccccc
Q 041205 121 GALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD-DEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 121 ~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l-G~Ls~rI~Fi~GDA~el~~ 199 (535)
..+...+.+.++++|||+|||+ |..++.+++...++.+|+++|+++++++.|+++++.. | . ++++|+++|+.+ ..
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-~-~~v~~~~~d~~~-~~ 175 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-I-GNVRTSRSDIAD-FI 175 (275)
T ss_dssp ------CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-C-TTEEEECSCTTT-CC
T ss_pred HHHHHHcCCCCcCEEEEecCCC-CHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-C-CcEEEEECchhc-cC
Confidence 3444445668899999999996 5556677774357899999999999999999999988 7 3 689999999987 33
Q ss_pred CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 200 KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.+.||+|+++ . ++...+++++.+.|+|||++++-..
T Consensus 176 ~~~~fD~Vi~~--~---~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 176 SDQMYDAVIAD--I---PDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp CSCCEEEEEEC--C---SCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred cCCCccEEEEc--C---cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 33569999984 2 4567999999999999999998664
No 147
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.36 E-value=4.2e-12 Score=125.63 Aligned_cols=110 Identities=17% Similarity=0.223 Sum_probs=87.4
Q ss_pred HHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC
Q 041205 122 ALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL 201 (535)
Q Consensus 122 lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL 201 (535)
.+...+.+.++++|||||||+ |..++.+|+....+++|+|+|+|+++++.|++.++..| + .+++|+++|+.+.+...
T Consensus 66 ~l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g-~-~~v~~~~~d~~~~~~~~ 142 (317)
T 1dl5_A 66 LFMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-I-ENVIFVCGDGYYGVPEF 142 (317)
T ss_dssp HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEESCGGGCCGGG
T ss_pred HHHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC-C-CCeEEEECChhhccccC
Confidence 333445567899999999997 66667888743335789999999999999999999999 5 45999999998755545
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+.||+|++....+... +.+.+.|+|||++++..
T Consensus 143 ~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp CCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEB
T ss_pred CCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEE
Confidence 6799999887664322 57888999999999864
No 148
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.36 E-value=2.6e-12 Score=126.41 Aligned_cols=140 Identities=14% Similarity=0.139 Sum_probs=104.7
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |+-++.+|+ ..+..+|+++|+|+.+++.|+++++..| +.++|+|+++|+.+...+...||+|++
T Consensus 20 ~~g~~VlDIGtGs-G~l~i~la~-~~~~~~V~avDi~~~al~~A~~N~~~~g-l~~~I~v~~gD~l~~~~~~~~~D~Ivi 96 (244)
T 3gnl_A 20 TKNERIADIGSDH-AYLPCFAVK-NQTASFAIAGEVVDGPFQSAQKQVRSSG-LTEQIDVRKGNGLAVIEKKDAIDTIVI 96 (244)
T ss_dssp CSSEEEEEETCST-THHHHHHHH-TTSEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCcc-HHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEecchhhccCccccccEEEE
Confidence 5789999999996 677788888 3566799999999999999999999999 788999999999876654335999998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEcccc---cccccCCCCccccCCcEEEEEE--cCCCcceeeeEEEecC
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKG---ARAFLYPVVEHELFDFKVLSIF--HPTNDVINSVVLLQLP 281 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~G---lR~fLYP~Vdpdl~GFeil~v~--hP~~eVINSVVvARK~ 281 (535)
+..- ..--.+++....++|++++.||+..-.| +|..++ -.||.+.... --.+ -...++.++++
T Consensus 97 agmG--g~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~------~~Gf~i~~E~lv~e~~-k~Yeii~~~~~ 164 (244)
T 3gnl_A 97 AGMG--GTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSE------QNNWLITSEAILREDN-KVYEIMVLAPS 164 (244)
T ss_dssp EEEC--HHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH------HHTEEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred eCCc--hHHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHH------HCCCEEEEEEEEEECC-EEEEEEEEEeC
Confidence 6333 2456788999999999999999865333 111121 2589885422 2333 33457777664
No 149
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.36 E-value=4.2e-12 Score=126.53 Aligned_cols=112 Identities=21% Similarity=0.203 Sum_probs=88.7
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcc
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
.+...++.+|||+||||++.| +.+|+.+.++++|+++|+|+.+++.+++++++.| + .+++|+++|+.+++...+.||
T Consensus 113 ~l~~~~g~~VLDlg~G~G~~t-~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g-~-~~v~~~~~D~~~~~~~~~~fD 189 (315)
T 1ixk_A 113 ALDPKPGEIVADMAAAPGGKT-SYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG-V-LNVILFHSSSLHIGELNVEFD 189 (315)
T ss_dssp HHCCCTTCEEEECCSSCSHHH-HHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT-C-CSEEEESSCGGGGGGGCCCEE
T ss_pred HhCCCCCCEEEEeCCCCCHHH-HHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC-C-CeEEEEECChhhcccccccCC
Confidence 446688999999999986666 4566633356899999999999999999999999 5 479999999988765445799
Q ss_pred eEEeccc---cCC-h--h----------------hHHHHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAAL---AGN-E--E----------------EKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaAL---Vgm-~--e----------------dK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|++++- .|+ . + ...++|+++.+.|||||+|++-+
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 9998743 222 1 1 12689999999999999999854
No 150
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.35 E-value=2.2e-12 Score=126.51 Aligned_cols=106 Identities=15% Similarity=0.224 Sum_probs=84.9
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc--CCc--------CCCeEEEEcccccccc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD--DEI--------EKRMKFLTCDIMEVKE 199 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l--G~L--------s~rI~Fi~GDA~el~~ 199 (535)
..+++||+||||+ |..++.+++ + +..+|++||+|+++++.|++.+ .. | + ..+++++++|+.+...
T Consensus 74 ~~~~~VLdiG~G~-G~~~~~l~~-~-~~~~v~~vDid~~~i~~ar~~~-~~~~~-l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 74 PKPKRVLVIGGGD-GGTVREVLQ-H-DVDEVIMVEIDEDVIMVSKDLI-KIDNG-LLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTT-S-CCSEEEEEESCHHHHHHHHHHT-CTTTT-HHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred CCCCeEEEEcCCc-CHHHHHHHh-C-CCCEEEEEECCHHHHHHHHHHH-hhccc-cccccccCCCCcEEEEECchHHHhc
Confidence 5689999999995 777788888 4 7789999999999999999998 54 4 3 4689999999976543
Q ss_pred CCCCcceEEeccccCC-h-hh--HHHHHHHHHhhcccCeEEEEEc
Q 041205 200 KLGEYDCIILAALAGN-E-EE--KAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 dL~~FDvVfiaALVgm-~-ed--K~~VL~eL~rvLKPGGvLVvRs 240 (535)
..+.||+|+++...+. . .. ..++++.+.++|+|||++++..
T Consensus 149 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 149 NNRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp HCCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 3456999999865422 1 11 3789999999999999999975
No 151
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.35 E-value=1.3e-11 Score=117.01 Aligned_cols=118 Identities=15% Similarity=0.186 Sum_probs=89.1
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..+..+++ ..++++|+|+|+++.+++.|++.. .++.|+.+|+.+++...+.||+|+.
T Consensus 84 ~~~~~vLdiG~G~-G~~~~~l~~-~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGE-GYYTHAFAD-ALPEITTFGLDVSKVAIKAAAKRY-------PQVTFCVASSHRLPFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTT-STTHHHHHH-TCTTSEEEEEESCHHHHHHHHHHC-------TTSEEEECCTTSCSBCTTCEEEEEE
T ss_pred CCCCEEEEECCCC-CHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcchhhCCCCCCceeEEEE
Confidence 5789999999997 666677777 357899999999999999998763 3579999999887766678999996
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEccc-----ccccccCCCCcc------ccCCcEEEE
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRSAK-----GARAFLYPVVEH------ELFDFKVLS 263 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~-----GlR~fLYP~Vdp------dl~GFeil~ 263 (535)
.... ..+.++.++|+|||++++-.+. .++..+|+.... ...||++..
T Consensus 155 ~~~~-------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~ 212 (269)
T 1p91_A 155 IYAP-------CKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQ 212 (269)
T ss_dssp ESCC-------CCHHHHHHHEEEEEEEEEEEECTTTTHHHHTTTCSSCCCCCCCCCCCTTEEEEE
T ss_pred eCCh-------hhHHHHHHhcCCCcEEEEEEcCHHHHHHHHHHhhcccccccchhhHhcCCcEEE
Confidence 4322 3589999999999999887642 133456664432 236887754
No 152
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.35 E-value=1e-11 Score=125.41 Aligned_cols=151 Identities=14% Similarity=0.122 Sum_probs=109.1
Q ss_pred HHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCC
Q 041205 123 LIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLG 202 (535)
Q Consensus 123 L~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~ 202 (535)
+.......++.+|||||||+ |..++.+++ .+|+.+++++|+ +.+++.|++.+...| +.++|+|+.+|..+ +.+.
T Consensus 194 l~~~~~~~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-l~~~v~~~~~d~~~-~~p~- 267 (369)
T 3gwz_A 194 VAAAYDFSGAATAVDIGGGR-GSLMAAVLD-AFPGLRGTLLER-PPVAEEARELLTGRG-LADRCEILPGDFFE-TIPD- 267 (369)
T ss_dssp HHHHSCCTTCSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCTTT-CCCS-
T ss_pred HHHhCCCccCcEEEEeCCCc-cHHHHHHHH-HCCCCeEEEEcC-HHHHHHHHHhhhhcC-cCCceEEeccCCCC-CCCC-
Confidence 33334557789999999996 666677777 478999999999 999999999999988 78899999999873 2222
Q ss_pred CcceEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEcc---cc-c-----ccc------cCCCCcc-------ccCC
Q 041205 203 EYDCIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA---KG-A-----RAF------LYPVVEH-------ELFD 258 (535)
Q Consensus 203 ~FDvVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa---~G-l-----R~f------LYP~Vdp-------dl~G 258 (535)
.||+||+....+. .++..++|+++++.|+|||+|++.+. .. . ..+ .....+. .-.|
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aG 347 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSG 347 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTT
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCC
Confidence 7999998766654 34445899999999999999988652 10 0 000 0001111 1379
Q ss_pred cEEEEEEcCCCcceeeeEEEec
Q 041205 259 FKVLSIFHPTNDVINSVVLLQL 280 (535)
Q Consensus 259 Feil~v~hP~~eVINSVVvARK 280 (535)
|++..+....... .++|.+++
T Consensus 348 f~~~~~~~~~~~~-~svie~~~ 368 (369)
T 3gwz_A 348 LRVERSLPCGAGP-VRIVEIRR 368 (369)
T ss_dssp EEEEEEEECSSSS-EEEEEEEE
T ss_pred CeEEEEEECCCCC-cEEEEEEe
Confidence 9998776523323 47888876
No 153
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.35 E-value=6.9e-12 Score=116.75 Aligned_cols=110 Identities=15% Similarity=0.189 Sum_probs=90.8
Q ss_pred HHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC
Q 041205 122 ALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL 201 (535)
Q Consensus 122 lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL 201 (535)
.+.....+.++++|||||||+ |..++.++++ +.+|+++|+++++++.|+++++..| +..+++++.+|+.+.....
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~ 156 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGS-GALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFN-LGKNVKFFNVDFKDAEVPE 156 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTT-CCTTEEEECSCTTTSCCCT
T ss_pred HHHHhcCCCCCCEEEEeCCCc-cHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcC-CCCcEEEEEcChhhcccCC
Confidence 334445567899999999995 7777888883 7899999999999999999999988 7789999999998754233
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.||+||.+. ++...+++++.+.|+|||++++-.+
T Consensus 157 ~~~D~v~~~~-----~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 157 GIFHAAFVDV-----REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp TCBSEEEECS-----SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred CcccEEEECC-----cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 5799999842 3567889999999999999998665
No 154
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.35 E-value=4.1e-12 Score=122.31 Aligned_cols=115 Identities=16% Similarity=0.124 Sum_probs=94.0
Q ss_pred HHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc
Q 041205 119 EYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK 198 (535)
Q Consensus 119 E~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~ 198 (535)
+...+...+.+.++.+|||+|||+ |..++.+++...++++|+++|+++++++.|+++++..| +.++++|+++|+.+.
T Consensus 100 ~~~~i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~- 176 (277)
T 1o54_A 100 DSSFIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG-LIERVTIKVRDISEG- 176 (277)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT-CGGGEEEECCCGGGC-
T ss_pred HHHHHHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-CCCCEEEEECCHHHc-
Confidence 334445555668899999999997 66667777744568999999999999999999999988 667899999999875
Q ss_pred cCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 199 EKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 199 ~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
...+.||+||++. ++...++.++.+.|+|||++++-.+
T Consensus 177 ~~~~~~D~V~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 177 FDEKDVDALFLDV-----PDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp CSCCSEEEEEECC-----SCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred ccCCccCEEEECC-----cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 3335799999852 3567899999999999999998764
No 155
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.35 E-value=3.8e-12 Score=123.77 Aligned_cols=111 Identities=15% Similarity=0.123 Sum_probs=88.6
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCC-cEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC----
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKS-THFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK---- 200 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~G-a~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d---- 200 (535)
.+...++++|||+||||++.|. .+|. ..++ ++|+++|+|+.+++.+++++++.| + .+++++++|+.+++..
T Consensus 78 ~l~~~~g~~VLDlgaG~G~~t~-~la~-~~~~~~~v~avD~~~~~l~~~~~~~~~~g-~-~~v~~~~~D~~~~~~~~~~~ 153 (274)
T 3ajd_A 78 VLNPREDDFILDMCAAPGGKTT-HLAQ-LMKNKGTIVAVEISKTRTKALKSNINRMG-V-LNTIIINADMRKYKDYLLKN 153 (274)
T ss_dssp HHCCCTTCEEEETTCTTCHHHH-HHHH-HTTTCSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEESCHHHHHHHHHHT
T ss_pred HhCCCCcCEEEEeCCCccHHHH-HHHH-HcCCCCEEEEECCCHHHHHHHHHHHHHhC-C-CcEEEEeCChHhcchhhhhc
Confidence 3455789999999999876664 5555 2455 899999999999999999999999 5 4899999999876542
Q ss_pred CCCcceEEecccc---CC---------------hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 201 LGEYDCIILAALA---GN---------------EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 201 L~~FDvVfiaALV---gm---------------~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.+.||+|++++-- |+ .....++++++.+.|||||+|++-+
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 4579999988322 21 1345889999999999999999865
No 156
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.34 E-value=7.7e-12 Score=122.20 Aligned_cols=110 Identities=12% Similarity=0.069 Sum_probs=84.3
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCC-----cCCCeEEEEccccccc----cC
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDE-----IEKRMKFLTCDIMEVK----EK 200 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~-----Ls~rI~Fi~GDA~el~----~d 200 (535)
.++.+|||||||++.++ ..+++ .++.+|+|+|+|+++++.|++.....+. ...+++|+++|+.+.+ ..
T Consensus 33 ~~~~~VLDlGcG~G~~~-~~l~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 109 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDL-LKWKK--GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFR 109 (313)
T ss_dssp --CCEEEEETCTTTTTH-HHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCS
T ss_pred CCCCEEEEECCCCcHHH-HHHHh--cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcc
Confidence 47889999999975555 45555 2678999999999999999998876420 1247999999998764 22
Q ss_pred --CCCcceEEeccccCCh----hhHHHHHHHHHhhcccCeEEEEEccc
Q 041205 201 --LGEYDCIILAALAGNE----EEKAKILGHIRKYMKEGGVLLVRSAK 242 (535)
Q Consensus 201 --L~~FDvVfiaALVgm~----edK~~VL~eL~rvLKPGGvLVvRsa~ 242 (535)
.+.||+|++...+++. ++...++.++.++|+|||++++....
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 110 DPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp STTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 2479999987655432 55679999999999999999987653
No 157
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=1.9e-12 Score=121.00 Aligned_cols=103 Identities=10% Similarity=0.059 Sum_probs=83.3
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC-----CC
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL-----GE 203 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL-----~~ 203 (535)
+.++.+|||||||+ |..+..+|+. +.+|+|||+|+.+++.|++.. . ..+++|+++|+.+..... ..
T Consensus 54 ~~~~~~vLD~GcG~-G~~~~~la~~---~~~v~gvD~s~~~~~~a~~~~---~--~~~~~~~~~d~~~~~~~~~~~~~~~ 124 (245)
T 3ggd_A 54 FNPELPLIDFACGN-GTQTKFLSQF---FPRVIGLDVSKSALEIAAKEN---T--AANISYRLLDGLVPEQAAQIHSEIG 124 (245)
T ss_dssp SCTTSCEEEETCTT-SHHHHHHHHH---SSCEEEEESCHHHHHHHHHHS---C--CTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHh---CCCEEEEECCHHHHHHHHHhC---c--ccCceEEECcccccccccccccccC
Confidence 46789999999996 6777788883 349999999999999999987 2 147999999998754321 23
Q ss_pred cceEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 204 YDCIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 204 FDvVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
||+|+.....+. .++...+++++.++|+|||++++.+
T Consensus 125 ~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 899998877765 4488999999999999999877755
No 158
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.34 E-value=1.6e-11 Score=129.40 Aligned_cols=116 Identities=14% Similarity=0.134 Sum_probs=90.4
Q ss_pred HHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHH-------HHHHhhcCCcC-CCeEEEEc
Q 041205 121 GALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLA-------RRIVSSDDEIE-KRMKFLTC 192 (535)
Q Consensus 121 ~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelA-------R~li~~lG~Ls-~rI~Fi~G 192 (535)
..+...+.+.++++|||||||+ |..++.+|+. .+..+|+|||+++.+++.| ++.++..| +. .+++|+++
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGs-G~la~~LA~~-~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G-l~~~nV~~i~g 308 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGV-GNCVVQAALE-CGCALSFGCEIMDDASDLTILQYEELKKRCKLYG-MRLNNVEFSLK 308 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTT-SHHHHHHHHH-HCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT-BCCCCEEEEES
T ss_pred HHHHHhcCCCCCCEEEEeCCCc-CHHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC-CCCCceEEEEc
Confidence 3334445667899999999995 7777888883 3446899999999999999 88888888 54 78999998
Q ss_pred cccccc----cCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 193 DIMEVK----EKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 193 DA~el~----~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|..... ...+.||+|++.... +.++...+|.++.+.|+|||+|++-+
T Consensus 309 D~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 309 KSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp SCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred CccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEee
Confidence 765321 123579999975333 23788889999999999999999965
No 159
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.34 E-value=5.8e-12 Score=118.12 Aligned_cols=104 Identities=11% Similarity=0.125 Sum_probs=82.8
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccc----cccCCC
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIME----VKEKLG 202 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~e----l~~dL~ 202 (535)
+.+.++++|||||||+ |..++.+|+. .+.++|+|||+++++++.|+++++.. .++.|+++|+.+ .+.. .
T Consensus 70 ~~~~~~~~VLDlGcG~-G~~~~~la~~-~~~~~v~gvD~s~~~~~~a~~~~~~~----~~v~~~~~d~~~~~~~~~~~-~ 142 (230)
T 1fbn_A 70 MPIKRDSKILYLGASA-GTTPSHVADI-ADKGIVYAIEYAPRIMRELLDACAER----ENIIPILGDANKPQEYANIV-E 142 (230)
T ss_dssp CCCCTTCEEEEESCCS-SHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHTTTC----TTEEEEECCTTCGGGGTTTS-C
T ss_pred cCCCCCCEEEEEcccC-CHHHHHHHHH-cCCcEEEEEECCHHHHHHHHHHhhcC----CCeEEEECCCCCcccccccC-c
Confidence 3456889999999996 7777888883 44689999999999999999987653 489999999986 4443 5
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
.||+|+.+ +........++.++.+.|+|||++++-
T Consensus 143 ~~D~v~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 143 KVDVIYED--VAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CEEEEEEC--CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEe--cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 79999943 211133478899999999999999884
No 160
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.34 E-value=7.1e-12 Score=126.16 Aligned_cols=111 Identities=21% Similarity=0.268 Sum_probs=88.0
Q ss_pred HHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCC
Q 041205 123 LIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLG 202 (535)
Q Consensus 123 L~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~ 202 (535)
+.......++++|||||||+ |.-++.+|+ .+..+|+|||+++ +++.|++.++..| +.++|+++++|+.++..+ +
T Consensus 42 i~~~l~~~~~~~VLDiGcGt-G~ls~~la~--~g~~~V~~vD~s~-~~~~a~~~~~~~~-l~~~v~~~~~d~~~~~~~-~ 115 (348)
T 2y1w_A 42 ILQNHTDFKDKIVLDVGCGS-GILSFFAAQ--AGARKIYAVEAST-MAQHAEVLVKSNN-LTDRIVVIPGKVEEVSLP-E 115 (348)
T ss_dssp HHHTGGGTTTCEEEEETCTT-SHHHHHHHH--TTCSEEEEEECST-HHHHHHHHHHHTT-CTTTEEEEESCTTTCCCS-S
T ss_pred HHhccccCCcCEEEEcCCCc-cHHHHHHHh--CCCCEEEEECCHH-HHHHHHHHHHHcC-CCCcEEEEEcchhhCCCC-C
Confidence 33334456889999999997 555677777 2456999999996 8899999999989 788999999999876543 5
Q ss_pred CcceEEecccc-CC-hhhHHHHHHHHHhhcccCeEEEEE
Q 041205 203 EYDCIILAALA-GN-EEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 203 ~FDvVfiaALV-gm-~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
.||+|+..... ++ .+.....+.++.+.|+|||++++.
T Consensus 116 ~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 116 QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred ceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 69999986443 22 456778889999999999999854
No 161
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.34 E-value=7.3e-12 Score=124.00 Aligned_cols=109 Identities=20% Similarity=0.340 Sum_probs=90.1
Q ss_pred CCCC-CCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc-CCCCcc
Q 041205 128 GVAQ-LKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE-KLGEYD 205 (535)
Q Consensus 128 ~l~~-pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~-dL~~FD 205 (535)
...+ +.+|||||||+ |..+..+++ .+|+.+++++|+ +++++.|++.+...| +.++|+|+.+|..+.+. ..++||
T Consensus 175 ~~~~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~D 250 (352)
T 3mcz_A 175 GVFARARTVIDLAGGH-GTYLAQVLR-RHPQLTGQIWDL-PTTRDAARKTIHAHD-LGGRVEFFEKNLLDARNFEGGAAD 250 (352)
T ss_dssp GGGTTCCEEEEETCTT-CHHHHHHHH-HCTTCEEEEEEC-GGGHHHHHHHHHHTT-CGGGEEEEECCTTCGGGGTTCCEE
T ss_pred CCcCCCCEEEEeCCCc-CHHHHHHHH-hCCCCeEEEEEC-HHHHHHHHHHHHhcC-CCCceEEEeCCcccCcccCCCCcc
Confidence 3455 89999999996 566667777 478899999999 899999999999988 77899999999987542 235699
Q ss_pred eEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|++....+. .++...+++++++.|+|||+|++.+
T Consensus 251 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 251 VVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9998766653 4456999999999999999998865
No 162
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.34 E-value=7.3e-12 Score=125.50 Aligned_cols=119 Identities=18% Similarity=0.138 Sum_probs=96.5
Q ss_pred HHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC
Q 041205 121 GALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK 200 (535)
Q Consensus 121 ~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d 200 (535)
..+....+..++.+|||+|||+ |.-++.+|....++.+|+|+|+|+.+++.|+++++..| +. +|+|+++|+.+++..
T Consensus 193 ~~l~~~~~~~~~~~vLD~gcGs-G~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g-~~-~i~~~~~D~~~~~~~ 269 (354)
T 3tma_A 193 QALLRLADARPGMRVLDPFTGS-GTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG-LS-WIRFLRADARHLPRF 269 (354)
T ss_dssp HHHHHHTTCCTTCCEEESSCTT-SHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT-CT-TCEEEECCGGGGGGT
T ss_pred HHHHHHhCCCCCCEEEeCCCCc-CHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC-CC-ceEEEeCChhhCccc
Confidence 3444455667889999999997 55667777732367999999999999999999999999 66 999999999998777
Q ss_pred CCCcceEEeccccCC--------hhhHHHHHHHHHhhcccCeEEEEEccc
Q 041205 201 LGEYDCIILAALAGN--------EEEKAKILGHIRKYMKEGGVLLVRSAK 242 (535)
Q Consensus 201 L~~FDvVfiaALVgm--------~edK~~VL~eL~rvLKPGGvLVvRsa~ 242 (535)
...||+|+++--.|. ...+..+++.+.++|+|||.+++-+.+
T Consensus 270 ~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 270 FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 777999999654442 123588999999999999999987653
No 163
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.34 E-value=7.5e-12 Score=124.18 Aligned_cols=110 Identities=15% Similarity=0.191 Sum_probs=84.7
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc--CCcCCCeEEEEccccccccC--CCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD--DEIEKRMKFLTCDIMEVKEK--LGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l--G~Ls~rI~Fi~GDA~el~~d--L~~FD 205 (535)
.++++||+||||. |..+..+++ +.++.+|++||+|+++++.|++.+... +....+++++++|+.+.+.. .+.||
T Consensus 94 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGD-GGVLREVLR-HGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTT-SHHHHHHHT-CTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCeEEEEcCCC-CHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCcee
Confidence 5789999999995 677777777 456789999999999999999987431 11246899999999887653 45799
Q ss_pred eEEeccccCChhhH----HHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAGNEEEK----AKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVgm~edK----~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|+++......+.. .++++++.++|+|||++++...
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 99997654321122 6899999999999999999754
No 164
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.33 E-value=4.3e-12 Score=126.41 Aligned_cols=109 Identities=15% Similarity=0.284 Sum_probs=82.5
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcC--Cc-CCCeEEEEccccccccC-CCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDD--EI-EKRMKFLTCDIMEVKEK-LGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG--~L-s~rI~Fi~GDA~el~~d-L~~FD 205 (535)
..+++||+||||+ |.++..+++ +.+..+|++||+|+++++.|++.+...+ .+ ..+++++++|+.+.... .+.||
T Consensus 82 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 159 (294)
T 3adn_A 82 GHAKHVLIIGGGD-GAMLREVTR-HKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp TTCCEEEEESCTT-CHHHHHHHT-CTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEE
T ss_pred CCCCEEEEEeCCh-hHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCcc
Confidence 5689999999996 667777777 5667899999999999999999987542 01 35899999999876543 35699
Q ss_pred eEEeccccCChhh----HHHHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAALAGNEEE----KAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaALVgm~ed----K~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|+++..-...+. ..++++.+.+.|+|||++++..
T Consensus 160 vIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 9999765432111 1789999999999999999975
No 165
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.33 E-value=8.3e-12 Score=115.85 Aligned_cols=103 Identities=15% Similarity=0.163 Sum_probs=82.5
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc--cC-CCCcc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK--EK-LGEYD 205 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~--~d-L~~FD 205 (535)
+.++++|||+|||+ |..++.+|++..++++|+|+|+++++++.++++++.. .+++|+++|+.+.. .. .+.||
T Consensus 71 ~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 71 IKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER----RNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC----TTEEEEECCTTCGGGGTTTCCCEE
T ss_pred CCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc----CCCEEEEccCCCcchhhcccCCce
Confidence 56889999999996 7777888874445689999999999999999988764 47999999997632 11 24699
Q ss_pred eEEeccccCChhhHH-HHHHHHHhhcccCeEEEEE
Q 041205 206 CIILAALAGNEEEKA-KILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 206 vVfiaALVgm~edK~-~VL~eL~rvLKPGGvLVvR 239 (535)
+|+++... ++.. .++.++.+.|+|||.+++-
T Consensus 146 ~v~~~~~~---~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 146 VIFEDVAQ---PTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEECCCS---TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCC---HhHHHHHHHHHHHhcCCCCEEEEE
Confidence 99987543 3444 4599999999999998886
No 166
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.33 E-value=8.3e-12 Score=116.79 Aligned_cols=105 Identities=9% Similarity=0.121 Sum_probs=82.7
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc---ccCCCCc
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV---KEKLGEY 204 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el---~~dL~~F 204 (535)
.+.++++|||||||+ |..++.+|++..++++|+|||+++.+++.+.+.++.. .+++|+++|+.+. +...+.|
T Consensus 74 ~~~~~~~vLDlG~G~-G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~----~~v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 74 HIKPGAKVLYLGAAS-GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR----TNIIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp CCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC----TTEEEECSCTTCGGGGGGGCCCE
T ss_pred cCCCCCEEEEEcccC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc----CCeEEEEcccCChhhhcccCCcE
Confidence 457889999999996 6777788884346789999999999988888887764 4799999999863 3334579
Q ss_pred ceEEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 205 DCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 205 DvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
|+|+++... ......++.++.+.|+|||++++.
T Consensus 149 D~V~~~~~~--~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 149 DVIFADVAQ--PDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp EEEEECCCC--TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEcCCC--ccHHHHHHHHHHHHcCCCeEEEEE
Confidence 999986442 134456788999999999999984
No 167
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.33 E-value=5.6e-12 Score=125.78 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=85.4
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh--cCCc-CCCeEEEEcccccccc-CCCCc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSS--DDEI-EKRMKFLTCDIMEVKE-KLGEY 204 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~--lG~L-s~rI~Fi~GDA~el~~-dL~~F 204 (535)
...+++||+||||. |..++.+++ +.+..+|++||+|+++++.|++.+.. .| + ..+++++++|+.+... ..+.|
T Consensus 93 ~~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~ar~~~~~~~~~-~~~~rv~v~~~Da~~~l~~~~~~f 169 (304)
T 2o07_A 93 HPNPRKVLIIGGGD-GGVLREVVK-HPSVESVVQCEIDEDVIQVSKKFLPGMAIG-YSSSKLTLHVGDGFEFMKQNQDAF 169 (304)
T ss_dssp SSSCCEEEEEECTT-SHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHHHTCSSCE
T ss_pred CCCCCEEEEECCCc-hHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHhHHhhcc-cCCCcEEEEECcHHHHHhhCCCCc
Confidence 35789999999995 777888887 45678999999999999999999876 34 3 4789999999987433 23569
Q ss_pred ceEEeccccCCh----hhHHHHHHHHHhhcccCeEEEEEc
Q 041205 205 DCIILAALAGNE----EEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 205 DvVfiaALVgm~----edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|+||+++..+.. ....++++++.++|+|||+|++..
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 999998654321 124679999999999999999976
No 168
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.32 E-value=3.1e-12 Score=123.38 Aligned_cols=108 Identities=18% Similarity=0.186 Sum_probs=80.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCC----------------cC---------
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDE----------------IE--------- 184 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~----------------Ls--------- 184 (535)
.++.+|||||||++. ++++++. .++.+|+|||++++|++.|++.++..+. ..
T Consensus 70 ~~~~~vLDiGcG~G~-~~~l~~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 146 (289)
T 2g72_A 70 VSGRTLIDIGSGPTV-YQLLSAC--SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQ 146 (289)
T ss_dssp SCCSEEEEETCTTCC-GGGTTGG--GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred CCCCeEEEECCCcCh-HHHHhhc--cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHH
Confidence 378999999999854 6665554 3578999999999999999986653210 00
Q ss_pred ---CCeEEEEccccc-cccC-----CCCcceEEeccccCC----hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 185 ---KRMKFLTCDIME-VKEK-----LGEYDCIILAALAGN----EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 185 ---~rI~Fi~GDA~e-l~~d-----L~~FDvVfiaALVgm----~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..++++++|+.+ .+.. .+.||+|+.....+. .++...+|.+++++|||||+|++..
T Consensus 147 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 147 LRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 025788889876 4322 234999998755543 4689999999999999999999864
No 169
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.32 E-value=1.3e-11 Score=119.04 Aligned_cols=106 Identities=21% Similarity=0.239 Sum_probs=85.8
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..++.+++ ..++++|+++|+|+++++.|+++++..| + .+++|+++|+.+.. ..+.||+|+.
T Consensus 108 ~~~~~vLDlG~Gs-G~~~~~la~-~~~~~~v~~vD~s~~~l~~a~~n~~~~~-~-~~v~~~~~d~~~~~-~~~~fD~Iv~ 182 (276)
T 2b3t_A 108 EQPCRILDLGTGT-GAIALALAS-ERPDCEIIAVDRMPDAVSLAQRNAQHLA-I-KNIHILQSDWFSAL-AGQQFAMIVS 182 (276)
T ss_dssp SSCCEEEEETCTT-SHHHHHHHH-HCTTSEEEEECSSHHHHHHHHHHHHHHT-C-CSEEEECCSTTGGG-TTCCEEEEEE
T ss_pred cCCCEEEEecCCc-cHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEEEcchhhhc-ccCCccEEEE
Confidence 5678999999997 566677776 3688999999999999999999999998 5 47999999997643 2457999998
Q ss_pred ccccCC-------------------------hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGN-------------------------EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm-------------------------~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..-... ......++.++.++|+|||.+++-.
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 621100 1467899999999999999999864
No 170
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.32 E-value=6.3e-12 Score=123.61 Aligned_cols=107 Identities=21% Similarity=0.229 Sum_probs=88.1
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcce
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDC 206 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDv 206 (535)
....+ .+|||||||+ |..++.+++ .+|+.+++++|+ +.+++.|++.+...| +.++|+|+.+|..+ +.+ +.||+
T Consensus 164 ~~~~~-~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~-~~~-~~~D~ 236 (334)
T 2ip2_A 164 LDFRG-RSFVDVGGGS-GELTKAILQ-AEPSARGVMLDR-EGSLGVARDNLSSLL-AGERVSLVGGDMLQ-EVP-SNGDI 236 (334)
T ss_dssp SCCTT-CEEEEETCTT-CHHHHHHHH-HCTTCEEEEEEC-TTCTHHHHHHTHHHH-HTTSEEEEESCTTT-CCC-SSCSE
T ss_pred CCCCC-CEEEEeCCCc-hHHHHHHHH-HCCCCEEEEeCc-HHHHHHHHHHHhhcC-CCCcEEEecCCCCC-CCC-CCCCE
Confidence 34455 8999999996 566667777 368899999999 999999999998888 67899999999876 333 56999
Q ss_pred EEeccccC-C-hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 207 IILAALAG-N-EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVg-m-~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|++....+ + .++..++++++++.|+|||+|++.+
T Consensus 237 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 237 YLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99876665 3 4455699999999999999998865
No 171
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.32 E-value=8.3e-12 Score=118.46 Aligned_cols=108 Identities=15% Similarity=0.191 Sum_probs=82.8
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc--------CCcCCCeEEEEccccc-cc-
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD--------DEIEKRMKFLTCDIME-VK- 198 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l--------G~Ls~rI~Fi~GDA~e-l~- 198 (535)
+.++.+|||||||+ |..++.+|+ ..+++.|+|||+++.+++.|++.++.. | + .+++|+++|+.+ ++
T Consensus 47 ~~~~~~vLDiGcG~-G~~~~~la~-~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~-~-~nv~~~~~D~~~~l~~ 122 (246)
T 2vdv_E 47 MTKKVTIADIGCGF-GGLMIDLSP-AFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHG-F-QNINVLRGNAMKFLPN 122 (246)
T ss_dssp BSCCEEEEEETCTT-SHHHHHHHH-HSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST-T-TTEEEEECCTTSCGGG
T ss_pred CCCCCEEEEEcCCC-CHHHHHHHH-hCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccC-C-CcEEEEeccHHHHHHH
Confidence 35788999999996 555677777 357889999999999999999998876 6 4 589999999987 33
Q ss_pred -cCCCCcceEEeccccCChhh--------HHHHHHHHHhhcccCeEEEEEc
Q 041205 199 -EKLGEYDCIILAALAGNEEE--------KAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 199 -~dL~~FDvVfiaALVgm~ed--------K~~VL~eL~rvLKPGGvLVvRs 240 (535)
.+.+.||.|++...-.+... ...++..+.++|+|||+|++.+
T Consensus 123 ~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 123 FFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 33456999885421111000 1589999999999999999864
No 172
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.32 E-value=8.9e-12 Score=115.41 Aligned_cols=106 Identities=20% Similarity=0.270 Sum_probs=83.3
Q ss_pred HHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC
Q 041205 122 ALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL 201 (535)
Q Consensus 122 lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL 201 (535)
.+...+.+.++.+|||||||+ |..+..+++. +.+|+|+|+|+++++.|++.+...| +++|+++|+.+.....
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~----~v~~~~~d~~~~~~~~ 132 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGI-GYYTALIAEI---VDKVVSVEINEKMYNYASKLLSYYN----NIKLILGDGTLGYEEE 132 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTCS----SEEEEESCGGGCCGGG
T ss_pred HHHHhcCCCCCCEEEEEcCCC-CHHHHHHHHH---cCEEEEEeCCHHHHHHHHHHHhhcC----CeEEEECCcccccccC
Confidence 333444567889999999997 6666777773 3899999999999999999987765 7999999998733334
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.||+|++....+... +++.+.|+|||++++-..
T Consensus 133 ~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp CCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEEC
T ss_pred CCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEc
Confidence 6799999887664322 468899999999998654
No 173
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.31 E-value=4.9e-12 Score=124.04 Aligned_cols=109 Identities=18% Similarity=0.231 Sum_probs=86.0
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc--CCc-CCCeEEEEccccccccC-CCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD--DEI-EKRMKFLTCDIMEVKEK-LGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l--G~L-s~rI~Fi~GDA~el~~d-L~~FD 205 (535)
..+++||+||||. |..++.+++ +.+..+|++||+|+++++.|++.+... + + ..+++++.+|+.+.... .+.||
T Consensus 74 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vEid~~~v~~ar~~~~~~~~~-~~~~rv~v~~~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 74 PNPEHVLVVGGGD-GGVIREILK-HPSVKKATLVDIDGKVIEYSKKFLPSIAGK-LDDPRVDVQVDDGFMHIAKSENQYD 150 (275)
T ss_dssp SSCCEEEEESCTT-CHHHHHHTT-CTTCSEEEEEESCHHHHHHHHHHCHHHHTT-TTSTTEEEEESCSHHHHHTCCSCEE
T ss_pred CCCCEEEEECCch-HHHHHHHHh-CCCCceEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHHHHhhCCCCee
Confidence 4689999999995 777778877 455689999999999999999988642 3 3 36899999999875433 35699
Q ss_pred eEEeccccCC-hh---hHHHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAGN-EE---EKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVgm-~e---dK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|+++...+. .+ ...++++.+.++|+|||++++...
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 9999865432 11 136899999999999999999754
No 174
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.31 E-value=1e-11 Score=119.41 Aligned_cols=141 Identities=19% Similarity=0.214 Sum_probs=100.8
Q ss_pred hHHhHHHHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEE
Q 041205 112 YVKLAKLEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLT 191 (535)
Q Consensus 112 Yv~LirlE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~ 191 (535)
+.+..+.-...+... +.++++|||||||+ |..++.+++ .|.+|+|+|+|+.+++.|+++++..| +. ++|++
T Consensus 103 ~~~tt~~~~~~l~~~--~~~~~~VLDiGcG~-G~l~~~la~---~g~~v~gvDi~~~~v~~a~~n~~~~~-~~--v~~~~ 173 (254)
T 2nxc_A 103 HHETTRLALKALARH--LRPGDKVLDLGTGS-GVLAIAAEK---LGGKALGVDIDPMVLPQAEANAKRNG-VR--PRFLE 173 (254)
T ss_dssp CSHHHHHHHHHHHHH--CCTTCEEEEETCTT-SHHHHHHHH---TTCEEEEEESCGGGHHHHHHHHHHTT-CC--CEEEE
T ss_pred CCHHHHHHHHHHHHh--cCCCCEEEEecCCC-cHHHHHHHH---hCCeEEEEECCHHHHHHHHHHHHHcC-Cc--EEEEE
Confidence 334444444555443 36789999999997 666778877 35599999999999999999999988 53 99999
Q ss_pred ccccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcccccccccCCCCcc--ccCCcEEEEEEcCC
Q 041205 192 CDIMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGARAFLYPVVEH--ELFDFKVLSIFHPT 268 (535)
Q Consensus 192 GDA~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~Vdp--dl~GFeil~v~hP~ 268 (535)
+|+.+.. ..+.||+|+..... .....++.++.++|+|||++++.....- -.+.+.. .-.||++..+....
T Consensus 174 ~d~~~~~-~~~~fD~Vv~n~~~---~~~~~~l~~~~~~LkpgG~lils~~~~~---~~~~v~~~l~~~Gf~~~~~~~~~ 245 (254)
T 2nxc_A 174 GSLEAAL-PFGPFDLLVANLYA---ELHAALAPRYREALVPGGRALLTGILKD---RAPLVREAMAGAGFRPLEEAAEG 245 (254)
T ss_dssp SCHHHHG-GGCCEEEEEEECCH---HHHHHHHHHHHHHEEEEEEEEEEEEEGG---GHHHHHHHHHHTTCEEEEEEEET
T ss_pred CChhhcC-cCCCCCEEEECCcH---HHHHHHHHHHHHHcCCCCEEEEEeeccC---CHHHHHHHHHHCCCEEEEEeccC
Confidence 9987632 23579999986444 4678999999999999999998532110 0000100 23699987665543
No 175
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.31 E-value=1e-11 Score=122.02 Aligned_cols=111 Identities=21% Similarity=0.224 Sum_probs=87.1
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCC-c-CCCeEEEEccccccccC-CCCcc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDE-I-EKRMKFLTCDIMEVKEK-LGEYD 205 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~-L-s~rI~Fi~GDA~el~~d-L~~FD 205 (535)
...+++||+||||. |..+..+++ +.++.+|++||+|+++++.|++.+...+. + ..+++++++|+.+.... .+.||
T Consensus 76 ~~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (283)
T 2i7c_A 76 SKEPKNVLVVGGGD-GGIIRELCK-YKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYD 153 (283)
T ss_dssp SSSCCEEEEEECTT-SHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCCCCeEEEEeCCc-CHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCce
Confidence 35789999999995 667777777 56678999999999999999999876420 2 36899999999875432 35699
Q ss_pred eEEeccccCC-hhhH---HHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAGN-EEEK---AKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVgm-~edK---~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|++++..+. .... .++++.+.+.|+|||++++...
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 9999764432 1111 6999999999999999999754
No 176
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.31 E-value=6.5e-12 Score=125.32 Aligned_cols=109 Identities=18% Similarity=0.228 Sum_probs=86.0
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc--CCc-CCCeEEEEccccccc-cCCCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD--DEI-EKRMKFLTCDIMEVK-EKLGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l--G~L-s~rI~Fi~GDA~el~-~dL~~FD 205 (535)
..+++||+||||. |..+..+++ +.++.+|++||+|+++++.|++.+... |.+ ..+++++++|+.+.. ...+.||
T Consensus 76 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (314)
T 1uir_A 76 PEPKRVLIVGGGE-GATLREVLK-HPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD 153 (314)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTT-STTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred CCCCeEEEEcCCc-CHHHHHHHh-cCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCcc
Confidence 5689999999995 777788877 456789999999999999999988652 201 368999999998743 2345799
Q ss_pred eEEeccccCC---hh--h--HHHHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAALAGN---EE--E--KAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaALVgm---~e--d--K~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|+++...+. .+ . ..++++.+.++|+|||++++..
T Consensus 154 ~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 9999865431 01 1 4799999999999999999964
No 177
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.31 E-value=6.9e-12 Score=119.27 Aligned_cols=105 Identities=16% Similarity=0.116 Sum_probs=78.3
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCC-hhHHHHH---HHHHhhcCCcCCCeEEEEccccccccCC-CCc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDID-ETANNLA---RRIVSSDDEIEKRMKFLTCDIMEVKEKL-GEY 204 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDID-peAIelA---R~li~~lG~Ls~rI~Fi~GDA~el~~dL-~~F 204 (535)
.++.+|||||||+ |..++.+|+ ..++++|+|||+| +.+++.| ++.+.+.| + .+++|+++|+.+++... +.+
T Consensus 23 ~~~~~vLDiGCG~-G~~~~~la~-~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~-~-~~v~~~~~d~~~l~~~~~d~v 98 (225)
T 3p2e_A 23 QFDRVHIDLGTGD-GRNIYKLAI-NDQNTFYIGIDPVKENLFDISKKIIKKPSKGG-L-SNVVFVIAAAESLPFELKNIA 98 (225)
T ss_dssp TCSEEEEEETCTT-SHHHHHHHH-TCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC-C-SSEEEECCBTTBCCGGGTTCE
T ss_pred CCCCEEEEEeccC-cHHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC-C-CCeEEEEcCHHHhhhhccCeE
Confidence 6789999999996 677778886 3589999999999 6666665 88888888 4 58999999998875422 335
Q ss_pred ceEEeccccC-----ChhhHHHHHHHHHhhcccCeEEEE
Q 041205 205 DCIILAALAG-----NEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 205 DvVfiaALVg-----m~edK~~VL~eL~rvLKPGGvLVv 238 (535)
|.|++....+ ...+...+|.+++++|||||++++
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 5555432110 011235789999999999999998
No 178
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.30 E-value=2.7e-11 Score=122.18 Aligned_cols=146 Identities=18% Similarity=0.179 Sum_probs=105.4
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceE
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCI 207 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvV 207 (535)
...+..+|+|||||+ |..++.+++ .+|+.+++..|. |++++.|++.+...+ .+||+|+.||..+. +..++|+|
T Consensus 176 ~~~~~~~v~DvGgG~-G~~~~~l~~-~~p~~~~~~~dl-p~v~~~a~~~~~~~~--~~rv~~~~gD~~~~--~~~~~D~~ 248 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGA-GALAKECMS-LYPGCKITVFDI-PEVVWTAKQHFSFQE--EEQIDFQEGDFFKD--PLPEADLY 248 (353)
T ss_dssp CGGGCSEEEEETCTT-SHHHHHHHH-HCSSCEEEEEEC-HHHHHHHHHHSCC----CCSEEEEESCTTTS--CCCCCSEE
T ss_pred CcccCCeEEeeCCCC-CHHHHHHHH-hCCCceeEeccC-HHHHHHHHHhhhhcc--cCceeeecCccccC--CCCCceEE
Confidence 456778999999996 666677777 488999999998 899999999987655 58999999998653 34568999
Q ss_pred EeccccCC--hhhHHHHHHHHHhhcccCeEEEEEcc----ccc---ccc--------cCCCC--cc-c------cCCcEE
Q 041205 208 ILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA----KGA---RAF--------LYPVV--EH-E------LFDFKV 261 (535)
Q Consensus 208 fiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa----~Gl---R~f--------LYP~V--dp-d------l~GFei 261 (535)
++...+|. .++..++|+++++.|+|||+|++.+. .+- ... +..-. .. + -.||+.
T Consensus 249 ~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~ 328 (353)
T 4a6d_A 249 ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRD 328 (353)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEE
T ss_pred EeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCce
Confidence 98866654 45567999999999999998888662 110 000 00100 01 1 279998
Q ss_pred EEEEcCCCcceeeeEEEecCC
Q 041205 262 LSIFHPTNDVINSVVLLQLPK 282 (535)
Q Consensus 262 l~v~hP~~eVINSVVvARK~~ 282 (535)
..+ +|.+.. .++|+|||+.
T Consensus 329 v~v-~~~~~~-~~~i~ArKgt 347 (353)
T 4a6d_A 329 FQF-KKTGAI-YDAILARKGT 347 (353)
T ss_dssp EEE-ECCSSS-CEEEEEECCC
T ss_pred EEE-EEcCCc-eEEEEEEecC
Confidence 655 455544 5799999973
No 179
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.30 E-value=1.1e-11 Score=127.14 Aligned_cols=114 Identities=13% Similarity=0.154 Sum_probs=89.1
Q ss_pred HHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCC--CeEEEEcccccccc
Q 041205 122 ALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEK--RMKFLTCDIMEVKE 199 (535)
Q Consensus 122 lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~--rI~Fi~GDA~el~~ 199 (535)
.+...+...++.+|||||||+ |..++.+|+ ..|+++|+|||+|+.+++.|+++++..| +.+ +++|+.+|+.+. .
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~-G~~s~~la~-~~p~~~V~gvD~s~~al~~Ar~n~~~ng-l~~~~~v~~~~~D~~~~-~ 288 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGN-GVIGLTLLD-KNPQAKVVFVDESPMAVASSRLNVETNM-PEALDRCEFMINNALSG-V 288 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTT-CHHHHHHHH-HCTTCEEEEEESCHHHHHHHHHHHHHHC-GGGGGGEEEEECSTTTT-C
T ss_pred HHHHhCcccCCCeEEEEeCcc-hHHHHHHHH-HCCCCEEEEEECcHHHHHHHHHHHHHcC-CCcCceEEEEechhhcc-C
Confidence 344445546679999999996 666677877 4679999999999999999999999988 543 588999999763 3
Q ss_pred CCCCcceEEeccccC----C-hhhHHHHHHHHHhhcccCeEEEEE
Q 041205 200 KLGEYDCIILAALAG----N-EEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 200 dL~~FDvVfiaALVg----m-~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
..+.||+|++....+ + .....+++.++.++|+|||++++-
T Consensus 289 ~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 289 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 345799999864433 1 233457999999999999998884
No 180
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.30 E-value=6.7e-12 Score=124.27 Aligned_cols=109 Identities=18% Similarity=0.177 Sum_probs=84.0
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh--cCCc-CCCeEEEEcccccccc-CCCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSS--DDEI-EKRMKFLTCDIMEVKE-KLGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~--lG~L-s~rI~Fi~GDA~el~~-dL~~FD 205 (535)
..+++||+||||+ |..++.+++ +.++.+|++||+|+++++.|++.+.. .+ + ..+++++++|+.+... ..+.||
T Consensus 89 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~~~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fD 165 (296)
T 1inl_A 89 PNPKKVLIIGGGD-GGTLREVLK-HDSVEKAILCEVDGLVIEAARKYLKQTSCG-FDDPRAEIVIANGAEYVRKFKNEFD 165 (296)
T ss_dssp SSCCEEEEEECTT-CHHHHHHTT-STTCSEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHGGGCSSCEE
T ss_pred CCCCEEEEEcCCc-CHHHHHHHh-cCCCCEEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHHHHhhCCCCce
Confidence 4679999999996 667777877 45678999999999999999999865 23 3 3689999999977543 235699
Q ss_pred eEEeccccC-C----hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAG-N----EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVg-m----~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|+++..-+ . .....++++.+.++|+|||++++...
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 999875422 1 00237899999999999999999754
No 181
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.29 E-value=3.1e-12 Score=119.42 Aligned_cols=91 Identities=11% Similarity=0.131 Sum_probs=77.1
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccc-ccccC-CCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIM-EVKEK-LGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~-el~~d-L~~FDvV 207 (535)
.++.+|||||||+ |..++.+++ .+++|+|+|+++.+++.|++. . .+++|+++|+. .++.. .+.||+|
T Consensus 47 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~----~---~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 47 TPQTRVLEAGCGH-GPDAARFGP---QAARWAAYDFSPELLKLARAN----A---PHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp CTTCEEEEESCTT-SHHHHHHGG---GSSEEEEEESCHHHHHHHHHH----C---TTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCCeEEEeCCCC-CHHHHHHHH---cCCEEEEEECCHHHHHHHHHh----C---CCceEEEcchhhccCCcCCCCEEEE
Confidence 5789999999996 677788888 278999999999999999988 2 36899999994 45555 4679999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEE
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLL 237 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLV 237 (535)
+.. .+...++.++.++|+|||+++
T Consensus 116 ~~~------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 116 VSR------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEE------SCCSGGGGGHHHHEEEEEEEE
T ss_pred EeC------CCHHHHHHHHHHHcCCCcEEE
Confidence 986 256788999999999999998
No 182
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.28 E-value=1.4e-11 Score=126.83 Aligned_cols=104 Identities=14% Similarity=0.185 Sum_probs=87.8
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..++.+++ .+++|++||+|+.+++.|++++...| + +++|+++|+.+...+.+.||+|++
T Consensus 232 ~~~~~VLDlGcG~-G~~~~~la~---~g~~V~gvDis~~al~~A~~n~~~~~-~--~v~~~~~D~~~~~~~~~~fD~Ii~ 304 (381)
T 3dmg_A 232 VRGRQVLDLGAGY-GALTLPLAR---MGAEVVGVEDDLASVLSLQKGLEANA-L--KAQALHSDVDEALTEEARFDIIVT 304 (381)
T ss_dssp TTTCEEEEETCTT-STTHHHHHH---TTCEEEEEESBHHHHHHHHHHHHHTT-C--CCEEEECSTTTTSCTTCCEEEEEE
T ss_pred CCCCEEEEEeeeC-CHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHcC-C--CeEEEEcchhhccccCCCeEEEEE
Confidence 4678999999996 666778888 37899999999999999999999988 4 489999999887665567999998
Q ss_pred ccccCC-----hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGN-----EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm-----~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+. ......++.++.++|+|||++++-.
T Consensus 305 npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 305 NPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp CCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 644432 4678899999999999999998854
No 183
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.28 E-value=1.8e-11 Score=123.03 Aligned_cols=109 Identities=21% Similarity=0.235 Sum_probs=86.0
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc--CCc-CCCeEEEEcccccccc-CCCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD--DEI-EKRMKFLTCDIMEVKE-KLGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l--G~L-s~rI~Fi~GDA~el~~-dL~~FD 205 (535)
..+++||+||||+ |..++.+++ +.++.+|+++|+|+++++.|++++... + + ..+++|+++|+.+... ..+.||
T Consensus 115 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDis~~~l~~ar~~~~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fD 191 (321)
T 2pt6_A 115 KEPKNVLVVGGGD-GGIIRELCK-YKSVENIDICEIDETVIEVSKIYFKNISCG-YEDKRVNVFIEDASKFLENVTNTYD 191 (321)
T ss_dssp SSCCEEEEEECTT-CHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCTTTSGG-GGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCCCEEEEEcCCc-cHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHHHhhccc-cCCCcEEEEEccHHHHHhhcCCCce
Confidence 5679999999996 677778877 457899999999999999999998762 3 3 3689999999977432 235699
Q ss_pred eEEeccccCC--hhh--HHHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAGN--EEE--KAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVgm--~ed--K~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|+++..-.. ... ..++++.+.+.|+|||++++...
T Consensus 192 vIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 192 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 9998763221 111 17999999999999999999754
No 184
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.28 E-value=9e-12 Score=107.58 Aligned_cols=99 Identities=14% Similarity=0.098 Sum_probs=75.9
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc--------cC
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK--------EK 200 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~--------~d 200 (535)
+.++.+|||||||+ |..++.+++.+.++.+|+|+|+++ +++. .+++|+++|+.+.+ ..
T Consensus 20 ~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI------------VGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC------------TTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc------------CcEEEEEcccccchhhhhhhccCC
Confidence 47889999999997 566667777434678999999999 6421 47899999998764 44
Q ss_pred CCCcceEEeccccCChhhH-----------HHHHHHHHhhcccCeEEEEEcc
Q 041205 201 LGEYDCIILAALAGNEEEK-----------AKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 201 L~~FDvVfiaALVgm~edK-----------~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.+.||+|+.+...+..... ..++.++.+.|+|||.+++...
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 4679999987554321122 6899999999999999998654
No 185
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.28 E-value=1.8e-11 Score=114.93 Aligned_cols=107 Identities=21% Similarity=0.246 Sum_probs=82.3
Q ss_pred HHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCC
Q 041205 124 IENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGE 203 (535)
Q Consensus 124 ~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~ 203 (535)
...+.+.++.+|||||||+ |+.++.+++. .+ .+|+++|+++++++.|++.+...| + .+++|+++|+.....+...
T Consensus 84 ~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~ 158 (235)
T 1jg1_A 84 LEIANLKPGMNILEVGTGS-GWNAALISEI-VK-TDVYTIERIPELVEFAKRNLERAG-V-KNVHVILGDGSKGFPPKAP 158 (235)
T ss_dssp HHHHTCCTTCCEEEECCTT-SHHHHHHHHH-HC-SCEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEESCGGGCCGGGCC
T ss_pred HHhcCCCCCCEEEEEeCCc-CHHHHHHHHH-hC-CEEEEEeCCHHHHHHHHHHHHHcC-C-CCcEEEECCcccCCCCCCC
Confidence 3334567889999999995 7777788773 33 899999999999999999999988 5 4599999998332222235
Q ss_pred cceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 204 YDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 204 FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
||+|++...... +.+.+.+.|+|||++++-..
T Consensus 159 fD~Ii~~~~~~~------~~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 159 YDVIIVTAGAPK------IPEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp EEEEEECSBBSS------CCHHHHHTEEEEEEEEEEEC
T ss_pred ccEEEECCcHHH------HHHHHHHhcCCCcEEEEEEe
Confidence 999998766632 12368889999999988654
No 186
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.27 E-value=1.4e-11 Score=117.11 Aligned_cols=99 Identities=16% Similarity=0.218 Sum_probs=80.8
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
++.+|||||||+ |..+..+++ .+.+|+|+|+|+++++.|++... + + |+++|+.+++...+.||+|++.
T Consensus 54 ~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~l~~a~~~~~--~----~--~~~~d~~~~~~~~~~fD~v~~~ 121 (260)
T 2avn_A 54 NPCRVLDLGGGT-GKWSLFLQE---RGFEVVLVDPSKEMLEVAREKGV--K----N--VVEAKAEDLPFPSGAFEAVLAL 121 (260)
T ss_dssp SCCEEEEETCTT-CHHHHHHHT---TTCEEEEEESCHHHHHHHHHHTC--S----C--EEECCTTSCCSCTTCEEEEEEC
T ss_pred CCCeEEEeCCCc-CHHHHHHHH---cCCeEEEEeCCHHHHHHHHhhcC--C----C--EEECcHHHCCCCCCCEEEEEEc
Confidence 789999999996 666677777 37899999999999999998753 2 2 8899998877666679999986
Q ss_pred ccc-CChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 211 ALA-GNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 211 ALV-gm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
..+ ++.++...+++++.++|+|||++++...
T Consensus 122 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 122 GDVLSYVENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp SSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chhhhccccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 433 3335689999999999999999998654
No 187
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.27 E-value=4.7e-11 Score=116.44 Aligned_cols=107 Identities=20% Similarity=0.230 Sum_probs=78.5
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeC-ChhHHHHHHHHH-----hhcCCcC----CCeEEEEccccc-
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDI-DETANNLARRIV-----SSDDEIE----KRMKFLTCDIME- 196 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDI-DpeAIelAR~li-----~~lG~Ls----~rI~Fi~GDA~e- 196 (535)
...++++|||||||+ |..++.+|+. ...+|+++|+ |+++++.|++++ +..| +. .+++++..|..+
T Consensus 76 ~~~~~~~vLDlG~G~-G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~-~~~~~~~~v~~~~~~~~~~ 151 (281)
T 3bzb_A 76 ELIAGKTVCELGAGA-GLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCS-SETVKRASPKVVPYRWGDS 151 (281)
T ss_dssp GGTTTCEEEETTCTT-SHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC-----------CCCEEEECCTTSC
T ss_pred hhcCCCeEEEecccc-cHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcc-cccCCCCCeEEEEecCCCc
Confidence 345788999999996 7777888882 2349999999 999999999999 6666 54 579998666433
Q ss_pred ---ccc--CCCCcceEEeccccCChhhHHHHHHHHHhhcc---c--CeEEEE
Q 041205 197 ---VKE--KLGEYDCIILAALAGNEEEKAKILGHIRKYMK---E--GGVLLV 238 (535)
Q Consensus 197 ---l~~--dL~~FDvVfiaALVgm~edK~~VL~eL~rvLK---P--GGvLVv 238 (535)
+.. ..+.||+|++...+...++...++..+.++|+ | ||++++
T Consensus 152 ~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 152 PDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp THHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred cHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 211 23579999975444335788999999999999 9 997655
No 188
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.27 E-value=1.2e-11 Score=120.63 Aligned_cols=105 Identities=18% Similarity=0.158 Sum_probs=86.7
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceE
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCI 207 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvV 207 (535)
.+.++++|||+|||+ |.-++.+|++ .++++|+|+|+++++++.|+++++..| + .++.|+++|+.+. ...+.||+|
T Consensus 116 ~~~~~~~VLDlgcG~-G~~s~~la~~-~~~~~V~~vD~s~~av~~a~~n~~~n~-l-~~~~~~~~d~~~~-~~~~~~D~V 190 (272)
T 3a27_A 116 ISNENEVVVDMFAGI-GYFTIPLAKY-SKPKLVYAIEKNPTAYHYLCENIKLNK-L-NNVIPILADNRDV-ELKDVADRV 190 (272)
T ss_dssp SCCTTCEEEETTCTT-TTTHHHHHHH-TCCSEEEEEECCHHHHHHHHHHHHHTT-C-SSEEEEESCGGGC-CCTTCEEEE
T ss_pred hcCCCCEEEEecCcC-CHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CCEEEEECChHHc-CccCCceEE
Confidence 357889999999996 5556777773 457799999999999999999999988 5 4789999999887 334569999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+++... ....++..+.+.|+|||++++...
T Consensus 191 i~d~p~----~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 191 IMGYVH----KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp EECCCS----SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred EECCcc----cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 997543 456789999999999999987553
No 189
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.27 E-value=1.8e-11 Score=121.46 Aligned_cols=115 Identities=20% Similarity=0.224 Sum_probs=86.4
Q ss_pred HHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcC---------CcCCCeEEEE
Q 041205 121 GALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDD---------EIEKRMKFLT 191 (535)
Q Consensus 121 ~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG---------~Ls~rI~Fi~ 191 (535)
..+...+.+.++++|||||||+ |+.++.+|+...+.++|+++|+++++++.|+++++..| .+..+++|++
T Consensus 95 ~~~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 95 NMILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 3334444568899999999997 66667777743456899999999999999999988632 0236899999
Q ss_pred cccccccc--CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 192 CDIMEVKE--KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 192 GDA~el~~--dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|+.+... ..+.||+|+++.. ....++.++.+.|+|||++++-.+
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~~-----~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDML-----NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp SCTTCCC-------EEEEEECSS-----STTTTHHHHGGGEEEEEEEEEEES
T ss_pred CChHHcccccCCCCeeEEEECCC-----CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 99987632 2346999998643 234589999999999999998664
No 190
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.27 E-value=8.3e-12 Score=118.23 Aligned_cols=107 Identities=15% Similarity=0.147 Sum_probs=83.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhc-CCCcEEEEEeCChhHHHHHHHHHhhc---CCcCCC-------------------
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQH-MKSTHFDNIDIDETANNLARRIVSSD---DEIEKR------------------- 186 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~-l~Ga~VtGIDIDpeAIelAR~li~~l---G~Ls~r------------------- 186 (535)
.++.+|||+|||+ |..++.+++.. .++.+|+|+|+|+.+++.|++.+... | +..+
T Consensus 50 ~~~~~vLD~gcGs-G~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 50 DGPVTLWDPCCGS-GYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAG-LTARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp CSCEEEEETTCTT-SHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHH-HHHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCCeEEECCCCC-CHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcc-ccccchhhhhhhhhcccccchhh
Confidence 4678999999996 66677777731 45789999999999999999998876 5 4333
Q ss_pred ------eE-------------EEEcccccccc-----CCCCcceEEeccccC-C--------hhhHHHHHHHHHhhcccC
Q 041205 187 ------MK-------------FLTCDIMEVKE-----KLGEYDCIILAALAG-N--------EEEKAKILGHIRKYMKEG 233 (535)
Q Consensus 187 ------I~-------------Fi~GDA~el~~-----dL~~FDvVfiaALVg-m--------~edK~~VL~eL~rvLKPG 233 (535)
++ |+++|+.+... ....||+|+.....+ . ...+..+++++.++|+||
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 77 99999987442 223799999853221 1 256779999999999999
Q ss_pred eEEEE
Q 041205 234 GVLLV 238 (535)
Q Consensus 234 GvLVv 238 (535)
|++++
T Consensus 208 G~l~~ 212 (250)
T 1o9g_A 208 AVIAV 212 (250)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 99998
No 191
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.26 E-value=1.9e-11 Score=123.50 Aligned_cols=106 Identities=17% Similarity=0.197 Sum_probs=85.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCC-CeEEEEccccccccC----CCCc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEK-RMKFLTCDIMEVKEK----LGEY 204 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~-rI~Fi~GDA~el~~d----L~~F 204 (535)
.++.+|||+|||+ |..++.+|+ .|++|++||+|+.+++.|+++++..| +.+ +++|+++|+.+.... ...|
T Consensus 152 ~~~~~VLDlgcGt-G~~sl~la~---~ga~V~~VD~s~~al~~a~~n~~~~g-l~~~~v~~i~~D~~~~l~~~~~~~~~f 226 (332)
T 2igt_A 152 DRPLKVLNLFGYT-GVASLVAAA---AGAEVTHVDASKKAIGWAKENQVLAG-LEQAPIRWICEDAMKFIQREERRGSTY 226 (332)
T ss_dssp SSCCEEEEETCTT-CHHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHHHT-CTTSCEEEECSCHHHHHHHHHHHTCCB
T ss_pred CCCCcEEEccccc-CHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECcHHHHHHHHHhcCCCc
Confidence 4678999999997 555677777 46799999999999999999999988 655 599999999876542 3579
Q ss_pred ceEEecccc-C---------ChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 205 DCIILAALA-G---------NEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 205 DvVfiaALV-g---------m~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|+|+++.-. + ...++..++..+.++|+|||+|++-.
T Consensus 227 D~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 227 DIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp SEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred eEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 999985220 1 13567899999999999999966644
No 192
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.26 E-value=1.8e-11 Score=113.27 Aligned_cols=94 Identities=17% Similarity=0.206 Sum_probs=77.4
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
++.+|||||||+ |..+..++. . +|+|+++++++.|++. +++|+++|+.+++...+.||+|++.
T Consensus 47 ~~~~vLDiG~G~-G~~~~~l~~---~----~~vD~s~~~~~~a~~~---------~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 47 PEGRGVEIGVGT-GRFAVPLKI---K----IGVEPSERMAEIARKR---------GVFVLKGTAENLPLKDESFDFALMV 109 (219)
T ss_dssp CSSCEEEETCTT-STTHHHHTC---C----EEEESCHHHHHHHHHT---------TCEEEECBTTBCCSCTTCEEEEEEE
T ss_pred CCCcEEEeCCCC-CHHHHHHHH---H----hccCCCHHHHHHHHhc---------CCEEEEcccccCCCCCCCeeEEEEc
Confidence 489999999997 555566655 1 9999999999999876 3689999998876655679999987
Q ss_pred cccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 211 ALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 211 ALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
..++..++...++.++.+.|+|||.+++...
T Consensus 110 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 110 TTICFVDDPERALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp SCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chHhhccCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 6554447789999999999999999998653
No 193
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.26 E-value=1.1e-11 Score=115.56 Aligned_cols=105 Identities=16% Similarity=0.159 Sum_probs=81.7
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCC-----CcEEEEEeCChhHHHHHHHHHhhcCCc----CCCeEEEEcccccccc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMK-----STHFDNIDIDETANNLARRIVSSDDEI----EKRMKFLTCDIMEVKE 199 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~-----Ga~VtGIDIDpeAIelAR~li~~lG~L----s~rI~Fi~GDA~el~~ 199 (535)
+.++.+|||||||+ |+.+..+++.... .++|+++|+++++++.|++.+...| + ..+++|+++|+.+...
T Consensus 82 ~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~ 159 (227)
T 1r18_A 82 LKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDD-RSMLDSGQLLIVEGDGRKGYP 159 (227)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHH-HHHHHHTSEEEEESCGGGCCG
T ss_pred CCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcC-ccccCCCceEEEECCcccCCC
Confidence 56789999999997 6666777773211 3699999999999999999988765 2 2689999999976322
Q ss_pred CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 200 KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.+.||+|++.+..+. +++++.+.|+|||++++-..
T Consensus 160 ~~~~fD~I~~~~~~~~------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 160 PNAPYNAIHVGAAAPD------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp GGCSEEEEEECSCBSS------CCHHHHHTEEEEEEEEEEES
T ss_pred cCCCccEEEECCchHH------HHHHHHHHhcCCCEEEEEEe
Confidence 3357999998866632 34788999999999988654
No 194
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.25 E-value=3.5e-11 Score=118.74 Aligned_cols=112 Identities=13% Similarity=0.090 Sum_probs=81.5
Q ss_pred HHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCC
Q 041205 123 LIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLG 202 (535)
Q Consensus 123 L~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~ 202 (535)
+...+.+.++.+|||||||+ |.-++.+|+ .|++|+|||+|++|++.|++.+.... -.+.+...+........+
T Consensus 37 il~~l~l~~g~~VLDlGcGt-G~~a~~La~---~g~~V~gvD~S~~ml~~Ar~~~~~~~---v~~~~~~~~~~~~~~~~~ 109 (261)
T 3iv6_A 37 DIFLENIVPGSTVAVIGAST-RFLIEKALE---RGASVTVFDFSQRMCDDLAEALADRC---VTIDLLDITAEIPKELAG 109 (261)
T ss_dssp HHHTTTCCTTCEEEEECTTC-HHHHHHHHH---TTCEEEEEESCHHHHHHHHHHTSSSC---CEEEECCTTSCCCGGGTT
T ss_pred HHHhcCCCCcCEEEEEeCcc-hHHHHHHHh---cCCEEEEEECCHHHHHHHHHHHHhcc---ceeeeeecccccccccCC
Confidence 33445667899999999996 777788888 47899999999999999999876542 123332222200011135
Q ss_pred CcceEEeccccC-C-hhhHHHHHHHHHhhcccCeEEEEEccc
Q 041205 203 EYDCIILAALAG-N-EEEKAKILGHIRKYMKEGGVLLVRSAK 242 (535)
Q Consensus 203 ~FDvVfiaALVg-m-~edK~~VL~eL~rvLKPGGvLVvRsa~ 242 (535)
.||+|+....++ + .++...++..+.++| |||+|++-...
T Consensus 110 ~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 110 HFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 799999876654 3 567888999999999 99999886543
No 195
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.25 E-value=1.2e-11 Score=130.27 Aligned_cols=99 Identities=16% Similarity=0.214 Sum_probs=80.0
Q ss_pred CCCCEEEEEccC------CChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC---
Q 041205 130 AQLKKVAFVGSG------PMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK--- 200 (535)
Q Consensus 130 ~~pkRVLeIGSG------plPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d--- 200 (535)
.++.+||||||| ++| .++.++++++|+++|+|||+++++. . . ..+|+|+++|+.++++.
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG-~Sl~la~~~fP~a~V~GVDiSp~m~--------~-~--~~rI~fv~GDa~dlpf~~~l 282 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGG-GSLRMWKSFFPRGQIYGLDIMDKSH--------V-D--ELRIRTIQGDQNDAEFLDRI 282 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCC-HHHHHHHHHCTTCEEEEEESSCCGG--------G-C--BTTEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCH-HHHHHHHHhCCCCEEEEEECCHHHh--------h-c--CCCcEEEEecccccchhhhh
Confidence 468999999999 444 4556666567899999999999972 1 2 36899999999887654
Q ss_pred ---CCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 201 ---LGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 201 ---L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.+.||+||.++. +...+...+|++++++|||||++++.+.
T Consensus 283 ~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 283 ARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp HHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred hcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCeEEEEEec
Confidence 478999998754 3457889999999999999999999774
No 196
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.24 E-value=2.6e-11 Score=119.35 Aligned_cols=106 Identities=17% Similarity=0.239 Sum_probs=84.5
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCc---ce
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEY---DC 206 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~F---Dv 206 (535)
.++.+|||||||+ |.-++.+|+. ++++|+|+|+|+++++.|+++++..| +.++++|+++|+.+... +.| |+
T Consensus 122 ~~~~~vLDlG~Gs-G~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~-l~~~v~~~~~D~~~~~~--~~f~~~D~ 195 (284)
T 1nv8_A 122 YGIKTVADIGTGS-GAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHG-VSDRFFVRKGEFLEPFK--EKFASIEM 195 (284)
T ss_dssp HTCCEEEEESCTT-SHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTT-CTTSEEEEESSTTGGGG--GGTTTCCE
T ss_pred cCCCEEEEEeCch-hHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECcchhhcc--cccCCCCE
Confidence 3578999999996 6777888884 89999999999999999999999999 77789999999986432 468 99
Q ss_pred EEeccccC-----------Ch--------hhHHHHHHHHH-hhcccCeEEEEEcc
Q 041205 207 IILAALAG-----------NE--------EEKAKILGHIR-KYMKEGGVLLVRSA 241 (535)
Q Consensus 207 VfiaALVg-----------m~--------edK~~VL~eL~-rvLKPGGvLVvRsa 241 (535)
|+...-.. .. .+...+++++. +.++|||.+++-..
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 99851100 00 11237899999 99999999998543
No 197
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.23 E-value=2.3e-11 Score=110.53 Aligned_cols=99 Identities=17% Similarity=0.299 Sum_probs=79.0
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccc--cccCCCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIME--VKEKLGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~e--l~~dL~~FDvV 207 (535)
.++.+|||||||+ |..+..+++. +.+|+|+|+++.+++.|++.. .+|+++|+.+ .+...+.||+|
T Consensus 31 ~~~~~vLdiG~G~-G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~---------~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSS-GALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL---------DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTT-SHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS---------SEEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCC-CHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC---------CcEEEcchhhcCCCCCCCccCEE
Confidence 5789999999996 6666777772 699999999999999888643 2688999876 33334579999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
++....+..++...++.++.+.|+|||.+++..+
T Consensus 98 ~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 98 IFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp EEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred EECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 9875554446778999999999999999998653
No 198
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.23 E-value=3.9e-11 Score=124.29 Aligned_cols=128 Identities=26% Similarity=0.324 Sum_probs=92.5
Q ss_pred ccchhhHHhHH-HH-----------HHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHH
Q 041205 107 PYYENYVKLAK-LE-----------YGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLAR 174 (535)
Q Consensus 107 pYy~NYv~Lir-lE-----------~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR 174 (535)
.||+.|..+.- .| ..++.+....-++++|||||||+ |+-+++.|+ ....+|++||.++ +++.|+
T Consensus 47 ~Yf~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~~~~~k~VLDvG~Gt-GiLs~~Aa~--aGA~~V~ave~s~-~~~~a~ 122 (376)
T 4hc4_A 47 LYYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGT-GILSIFCAQ--AGARRVYAVEASA-IWQQAR 122 (376)
T ss_dssp --CCCHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHTTCEEEEETCTT-SHHHHHHHH--TTCSEEEEEECST-THHHHH
T ss_pred hhhhhccCcHHHHHHhCCHHHHHHHHHHHHhCHHhcCCCEEEEeCCCc-cHHHHHHHH--hCCCEEEEEeChH-HHHHHH
Confidence 67788876542 11 12333222234789999999996 666788877 2235899999996 889999
Q ss_pred HHHhhcCCcCCCeEEEEccccccccCCCCcceEEeccc---cCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 175 RIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAAL---AGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 175 ~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaAL---Vgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
++++..| ++++|+++++|+.++..+ ..||+|+..-+ .........++....+.|+|||+++-..
T Consensus 123 ~~~~~n~-~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~ 189 (376)
T 4hc4_A 123 EVVRFNG-LEDRVHVLPGPVETVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPAS 189 (376)
T ss_dssp HHHHHTT-CTTTEEEEESCTTTCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCE
T ss_pred HHHHHcC-CCceEEEEeeeeeeecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCcc
Confidence 9999999 899999999999876544 57999986322 1112356788888889999999987644
No 199
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.23 E-value=7.3e-11 Score=108.12 Aligned_cols=123 Identities=16% Similarity=0.159 Sum_probs=87.8
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..++.+|||||||++ ..+..+ +.+|+|+|+++. +++|+++|+.+++...+.||+|+
T Consensus 65 ~~~~~~vLDiG~G~G-~~~~~l------~~~v~~~D~s~~-----------------~~~~~~~d~~~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 65 RPASLVVADFGCGDC-RLASSI------RNPVHCFDLASL-----------------DPRVTVCDMAQVPLEDESVDVAV 120 (215)
T ss_dssp SCTTSCEEEETCTTC-HHHHHC------CSCEEEEESSCS-----------------STTEEESCTTSCSCCTTCEEEEE
T ss_pred cCCCCeEEEECCcCC-HHHHHh------hccEEEEeCCCC-----------------CceEEEeccccCCCCCCCEeEEE
Confidence 457899999999974 443433 368999999998 35788999988766666799999
Q ss_pred eccccCChhhHHHHHHHHHhhcccCeEEEEEcccccccccCCCCcc-----ccCCcEEEEEEcCCCcceeeeEEEecCC
Q 041205 209 LAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGARAFLYPVVEH-----ELFDFKVLSIFHPTNDVINSVVLLQLPK 282 (535)
Q Consensus 209 iaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~Vdp-----dl~GFeil~v~hP~~eVINSVVvARK~~ 282 (535)
+....+. ++...++.++.++|+|||.+++..... .++..+. .-.||++.......+ . ..++++||..
T Consensus 121 ~~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~----~~~~~~~~~~~l~~~Gf~~~~~~~~~~-~-~~~~~~~k~~ 192 (215)
T 2zfu_A 121 FCLSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS----RFEDVRTFLRAVTKLGFKIVSKDLTNS-H-FFLFDFQKTG 192 (215)
T ss_dssp EESCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG----GCSCHHHHHHHHHHTTEEEEEEECCST-T-CEEEEEEECS
T ss_pred Eehhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC----CCCCHHHHHHHHHHCCCEEEEEecCCC-e-EEEEEEEecC
Confidence 8765553 788999999999999999999875422 1111111 237999876544333 2 3467778753
No 200
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.22 E-value=5.5e-11 Score=134.32 Aligned_cols=118 Identities=12% Similarity=0.132 Sum_probs=90.6
Q ss_pred HHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh------cCCcCCCeEEEEcc
Q 041205 120 YGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSS------DDEIEKRMKFLTCD 193 (535)
Q Consensus 120 ~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~------lG~Ls~rI~Fi~GD 193 (535)
+..+...+...++.+|||||||+ |..++.||++..+..+|+|||+|+++++.|++.++. .| + .+|+|+++|
T Consensus 710 le~LLelL~~~~g~rVLDVGCGT-G~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~g-l-~nVefiqGD 786 (950)
T 3htx_A 710 VEYALKHIRESSASTLVDFGCGS-GSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACN-V-KSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHHSCCSEEEEETCSS-SHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSS-C-SEEEEEESC
T ss_pred HHHHHHHhcccCCCEEEEECCCC-CHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcC-C-CceEEEECc
Confidence 33333334336889999999996 777788888322458999999999999999996653 24 3 489999999
Q ss_pred ccccccCCCCcceEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 194 IMEVKEKLGEYDCIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 194 A~el~~dL~~FDvVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+.+++...+.||+|++...+++ .+....+++++.++|+|| .+++-.+
T Consensus 787 a~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp TTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred hHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 9998887788999998766644 344557999999999999 6666554
No 201
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.22 E-value=1.1e-11 Score=125.81 Aligned_cols=128 Identities=12% Similarity=0.122 Sum_probs=92.7
Q ss_pred cCccchhhHHhHH----HHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc
Q 041205 105 RFPYYENYVKLAK----LEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD 180 (535)
Q Consensus 105 ~FpYy~NYv~Lir----lE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l 180 (535)
.+.|+..+..... .-...+.....+.++.+|||||||+ |..+..+++ .|.+|+|||+|+.+++.|++.
T Consensus 77 ~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~-G~~~~~l~~---~g~~v~gvD~s~~~~~~a~~~---- 148 (416)
T 4e2x_A 77 VYPYHSSGSSVMREHFAMLARDFLATELTGPDPFIVEIGCND-GIMLRTIQE---AGVRHLGFEPSSGVAAKAREK---- 148 (416)
T ss_dssp TCCCCGGGCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTT-TTTHHHHHH---TTCEEEEECCCHHHHHHHHTT----
T ss_pred CccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCC-CHHHHHHHH---cCCcEEEECCCHHHHHHHHHc----
Confidence 4556555543333 2233344444557889999999996 667777877 477999999999999999876
Q ss_pred CCcCCC-eEEEEccccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 181 DEIEKR-MKFLTCDIMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 181 G~Ls~r-I~Fi~GDA~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
| +... ..|..+++.+++...+.||+|+....++..++...++++++++|||||++++..+
T Consensus 149 ~-~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 149 G-IRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp T-CCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-CCcceeeechhhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 4 2221 2244556655555557899999876665557999999999999999999999754
No 202
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.21 E-value=1.5e-11 Score=116.23 Aligned_cols=105 Identities=19% Similarity=0.256 Sum_probs=74.1
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc-ccCC-----CCc
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV-KEKL-----GEY 204 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el-~~dL-----~~F 204 (535)
++.+|||||||++.+ ++.+|.+ .++++|+|+|+|+++++.|+++++..| +.++++|+++|+.+. ...+ +.|
T Consensus 65 ~~~~vLDlG~G~G~~-~~~la~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCI-YPLLGAT-LNGWYFLATEVDDMCFNYAKKNVEQNN-LSDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTH-HHHHHHH-HHCCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHH-HHHHHHh-CCCCeEEEEECCHHHHHHHHHHHHHcC-CCccEEEEEcchhhhhhhhhhcccCCcc
Confidence 578999999997544 4556652 467999999999999999999999999 777899999998762 2122 469
Q ss_pred ceEEeccccCC-h--------------hhHHHHHHHHHhhcccCeEEEE
Q 041205 205 DCIILAALAGN-E--------------EEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 205 DvVfiaALVgm-~--------------edK~~VL~eL~rvLKPGGvLVv 238 (535)
|+|++.--... . ++...++..++++|||||.+.+
T Consensus 142 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 142 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp SEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred cEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 99998622111 0 1234567788889999887654
No 203
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.21 E-value=3.4e-11 Score=117.94 Aligned_cols=98 Identities=18% Similarity=0.134 Sum_probs=80.9
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc--CCc-CCCeEEEEccccccccCCCCcce
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD--DEI-EKRMKFLTCDIMEVKEKLGEYDC 206 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l--G~L-s~rI~Fi~GDA~el~~dL~~FDv 206 (535)
..+++||+||||. |.++..+++ + + .+|+++|+|+++++.|++.+... + + ..+++++.+|+.+.. +.||+
T Consensus 71 ~~~~~VL~iG~G~-G~~~~~ll~-~-~-~~v~~veid~~~i~~ar~~~~~~~~~-~~~~rv~~~~~D~~~~~---~~fD~ 142 (262)
T 2cmg_A 71 KELKEVLIVDGFD-LELAHQLFK-Y-D-THIDFVQADEKILDSFISFFPHFHEV-KNNKNFTHAKQLLDLDI---KKYDL 142 (262)
T ss_dssp SCCCEEEEESSCC-HHHHHHHTT-S-S-CEEEEECSCHHHHGGGTTTSTTHHHH-HTCTTEEEESSGGGSCC---CCEEE
T ss_pred CCCCEEEEEeCCc-CHHHHHHHh-C-C-CEEEEEECCHHHHHHHHHHHHhhccc-cCCCeEEEEechHHHHH---hhCCE
Confidence 5679999999995 777787877 4 5 89999999999999999987542 2 2 358999999998755 67999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|++++.. ...+++.+.+.|+|||++++..
T Consensus 143 Ii~d~~d-----p~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 143 IFCLQEP-----DIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp EEESSCC-----CHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEECCCC-----hHHHHHHHHHhcCCCcEEEEEc
Confidence 9998433 3459999999999999999964
No 204
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.20 E-value=8.7e-11 Score=120.43 Aligned_cols=107 Identities=15% Similarity=0.205 Sum_probs=85.7
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCC-CeEEEEccccccccC----CCC
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEK-RMKFLTCDIMEVKEK----LGE 203 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~-rI~Fi~GDA~el~~d----L~~ 203 (535)
.++++|||+|||+ |.-++.+|+ .|+ +|+|||+|+++++.|+++++..| +.+ +++|+++|+.+.... ...
T Consensus 211 ~~~~~VLDl~cGt-G~~sl~la~---~ga~~V~~vD~s~~al~~A~~N~~~n~-~~~~~v~~~~~D~~~~l~~~~~~~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYT-AAFSVAAAM---GGAMATTSVDLAKRSRALSLAHFEANH-LDMANHQLVVMDVFDYFKYARRHHLT 285 (385)
T ss_dssp TBTCEEEEETCTT-THHHHHHHH---TTBSEEEEEESCTTHHHHHHHHHHHTT-CCCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred cCCCeEEEEeecc-CHHHHHHHH---CCCCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECCHHHHHHHHHHhCCC
Confidence 5689999999996 555677777 244 89999999999999999999999 665 899999999875432 236
Q ss_pred cceEEecccc-----C---C-hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 204 YDCIILAALA-----G---N-EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 204 FDvVfiaALV-----g---m-~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
||+|+++.-. + . ...+.+++..+.+.|+|||+|++-..
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9999986222 1 1 46677889999999999999988653
No 205
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.20 E-value=3.5e-11 Score=120.15 Aligned_cols=109 Identities=21% Similarity=0.237 Sum_probs=83.3
Q ss_pred HHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCC
Q 041205 123 LIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLG 202 (535)
Q Consensus 123 L~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~ 202 (535)
+.....+.++.+|||||||+ |..++.+++ .+|+.+++++|+ +.++. ++.++..| +.++|+|+.+|+.+ +.+
T Consensus 176 ~~~~~~~~~~~~vLDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~--~~~~~~~~-~~~~v~~~~~d~~~-~~p-- 246 (348)
T 3lst_A 176 LARAGDFPATGTVADVGGGR-GGFLLTVLR-EHPGLQGVLLDR-AEVVA--RHRLDAPD-VAGRWKVVEGDFLR-EVP-- 246 (348)
T ss_dssp HHHHSCCCSSEEEEEETCTT-SHHHHHHHH-HCTTEEEEEEEC-HHHHT--TCCCCCGG-GTTSEEEEECCTTT-CCC--
T ss_pred HHHhCCccCCceEEEECCcc-CHHHHHHHH-HCCCCEEEEecC-HHHhh--cccccccC-CCCCeEEEecCCCC-CCC--
Confidence 33344567889999999996 666677777 478999999999 55555 44455566 67899999999863 222
Q ss_pred CcceEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 203 EYDCIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 203 ~FDvVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.||+|++....+. .++..++|+++++.|||||+|++.+
T Consensus 247 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 247 HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 8999998766654 3344799999999999999998865
No 206
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.19 E-value=8.6e-11 Score=116.47 Aligned_cols=111 Identities=18% Similarity=0.225 Sum_probs=83.3
Q ss_pred CCCEEEEEccCCCh--h-hHHHHHhhcCC----CcEEEEEeCChhHHHHHHHHHhh-----------------------c
Q 041205 131 QLKKVAFVGSGPMP--L-TSIILASQHMK----STHFDNIDIDETANNLARRIVSS-----------------------D 180 (535)
Q Consensus 131 ~pkRVLeIGSGplP--l-TAI~LAk~~l~----Ga~VtGIDIDpeAIelAR~li~~-----------------------l 180 (535)
++.||+++|||++- | -|+.+++. .+ +.+|+|+|+|++|++.|++.+-. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~-~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~ 183 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADA-LGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHE 183 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHH-HCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSC
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHh-cccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCC
Confidence 46899999999753 2 35667663 22 57999999999999999987510 0
Q ss_pred C------CcCCCeEEEEccccccccC-CCCcceEEeccccC-C-hhhHHHHHHHHHhhcccCeEEEEEccc
Q 041205 181 D------EIEKRMKFLTCDIMEVKEK-LGEYDCIILAALAG-N-EEEKAKILGHIRKYMKEGGVLLVRSAK 242 (535)
Q Consensus 181 G------~Ls~rI~Fi~GDA~el~~d-L~~FDvVfiaALVg-m-~edK~~VL~eL~rvLKPGGvLVvRsa~ 242 (535)
| .+.++|+|.++|..+.+.+ .+.||+|++-.... + .+.+.+++..+++.|+|||.|++-...
T Consensus 184 ~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 184 GLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp SEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred CceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 1 0124799999999874333 35799999876553 3 567799999999999999999995543
No 207
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.19 E-value=7.7e-11 Score=119.69 Aligned_cols=101 Identities=20% Similarity=0.232 Sum_probs=82.1
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccc-cccC-CCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIME-VKEK-LGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~e-l~~d-L~~FDvV 207 (535)
.++++||||| |+ |..++.+|+ ..++.+|+++|+|+++++.|+++++..| +. +|+|+++|+.+ ++.. .+.||+|
T Consensus 171 ~~~~~VLDlG-G~-G~~~~~la~-~~~~~~v~~vDi~~~~l~~a~~~~~~~g-~~-~v~~~~~D~~~~l~~~~~~~fD~V 245 (373)
T 2qm3_A 171 LENKDIFVLG-DD-DLTSIALML-SGLPKRIAVLDIDERLTKFIEKAANEIG-YE-DIEIFTFDLRKPLPDYALHKFDTF 245 (373)
T ss_dssp STTCEEEEES-CT-TCHHHHHHH-HTCCSEEEEECSCHHHHHHHHHHHHHHT-CC-CEEEECCCTTSCCCTTTSSCBSEE
T ss_pred CCCCEEEEEC-CC-CHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CC-CEEEEEChhhhhchhhccCCccEE
Confidence 4689999999 96 666777777 3456899999999999999999999999 65 89999999987 4432 3469999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEE
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVL 236 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvL 236 (535)
+++...+. .....++.++.+.|+|||++
T Consensus 246 i~~~p~~~-~~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 246 ITDPPETL-EAIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp EECCCSSH-HHHHHHHHHHHHTBCSTTCE
T ss_pred EECCCCch-HHHHHHHHHHHHHcccCCeE
Confidence 99854432 23588999999999999943
No 208
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.18 E-value=7e-11 Score=125.18 Aligned_cols=106 Identities=21% Similarity=0.244 Sum_probs=85.7
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcce
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDC 206 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDv 206 (535)
....++++|||||||+ |.-++.+|+ .+..+|+|||+++ +++.|+++++..| +.++|+|+.+|+.++..+ +.||+
T Consensus 154 l~~~~~~~VLDiGcGt-G~la~~la~--~~~~~V~gvD~s~-~l~~A~~~~~~~g-l~~~v~~~~~d~~~~~~~-~~fD~ 227 (480)
T 3b3j_A 154 HTDFKDKIVLDVGCGS-GILSFFAAQ--AGARKIYAVEAST-MAQHAEVLVKSNN-LTDRIVVIPGKVEEVSLP-EQVDI 227 (480)
T ss_dssp GGGTTTCEEEEESCST-THHHHHHHH--TTCSEEEEEECHH-HHHHHHHHHHHTT-CTTTEEEEESCTTTCCCS-SCEEE
T ss_pred hhhcCCCEEEEecCcc-cHHHHHHHH--cCCCEEEEEEcHH-HHHHHHHHHHHcC-CCCcEEEEECchhhCccC-CCeEE
Confidence 3445789999999996 566677777 3567999999999 9999999999999 788999999999875433 46999
Q ss_pred EEeccccC-C-hhhHHHHHHHHHhhcccCeEEEE
Q 041205 207 IILAALAG-N-EEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 207 VfiaALVg-m-~edK~~VL~eL~rvLKPGGvLVv 238 (535)
|+...... + .++....+.++.+.|+|||+++.
T Consensus 228 Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 228 IISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 99864321 1 25667788899999999999985
No 209
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.18 E-value=5.1e-11 Score=119.33 Aligned_cols=113 Identities=17% Similarity=0.257 Sum_probs=89.0
Q ss_pred HHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC
Q 041205 121 GALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK 200 (535)
Q Consensus 121 ~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d 200 (535)
..+...+...++.+|||||||+ |..++.+++ ..++.+|+++|+|+.+++.|++.+...| + .++|+.+|+.+..
T Consensus 186 ~~ll~~l~~~~~~~VLDlGcG~-G~~~~~la~-~~~~~~v~~vD~s~~~l~~a~~~~~~~~-~--~~~~~~~d~~~~~-- 258 (343)
T 2pjd_A 186 QLLLSTLTPHTKGKVLDVGCGA-GVLSVAFAR-HSPKIRLTLCDVSAPAVEASRATLAANG-V--EGEVFASNVFSEV-- 258 (343)
T ss_dssp HHHHHHSCTTCCSBCCBTTCTT-SHHHHHHHH-HCTTCBCEEEESBHHHHHHHHHHHHHTT-C--CCEEEECSTTTTC--
T ss_pred HHHHHhcCcCCCCeEEEecCcc-CHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHhC-C--CCEEEEccccccc--
Confidence 3444444335678999999996 666677777 3677899999999999999999999888 4 4688999987643
Q ss_pred CCCcceEEeccccCC-----hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 201 LGEYDCIILAALAGN-----EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 201 L~~FDvVfiaALVgm-----~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.+.||+|++....+. ..+...++.++.++|+|||.+++-.
T Consensus 259 ~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 259 KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 457999998754432 3567899999999999999998854
No 210
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.16 E-value=5.4e-11 Score=126.30 Aligned_cols=112 Identities=14% Similarity=0.079 Sum_probs=87.7
Q ss_pred HhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc-CCCC
Q 041205 125 ENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE-KLGE 203 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~-dL~~ 203 (535)
..+...++.+|||+||||++.| +.+|.....+++|+++|+|+.+++.+++++++.| +. |.++++|+.++.. ..+.
T Consensus 95 ~~L~~~~g~~VLDlgaGpG~kt-~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G-~~--v~~~~~Da~~l~~~~~~~ 170 (464)
T 3m6w_A 95 VLLDPKPGERVLDLAAAPGGKT-THLAARMGGKGLLLANEVDGKRVRGLLENVERWG-AP--LAVTQAPPRALAEAFGTY 170 (464)
T ss_dssp HHHCCCTTCEEEESSCTTCHHH-HHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC-CC--CEEECSCHHHHHHHHCSC
T ss_pred HhcCcCCCCEEEEEcCCcCHHH-HHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-Ce--EEEEECCHHHhhhhcccc
Confidence 3445678999999999997666 4555533345899999999999999999999999 54 9999999988763 3457
Q ss_pred cceEEecccc---CC---hh----------------hHHHHHHHHHhhcccCeEEEEEc
Q 041205 204 YDCIILAALA---GN---EE----------------EKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 204 FDvVfiaALV---gm---~e----------------dK~~VL~eL~rvLKPGGvLVvRs 240 (535)
||+|++++-- |+ .+ ...++|+++.+.|||||+|++-+
T Consensus 171 FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 171 FHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999986432 11 01 12789999999999999999854
No 211
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.16 E-value=1.7e-10 Score=120.41 Aligned_cols=111 Identities=24% Similarity=0.245 Sum_probs=87.2
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCC-cEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC--C
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKS-THFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL--G 202 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~G-a~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL--~ 202 (535)
.+...++++|||+||||++.|. .+|. ..++ ++|+++|+|+.+++.+++++++.| + .+++++++|+.+.+... +
T Consensus 254 ~l~~~~g~~VLDlgaG~G~~t~-~la~-~~~~~~~v~a~D~s~~~l~~~~~~~~~~g-~-~~v~~~~~D~~~~~~~~~~~ 329 (450)
T 2yxl_A 254 VLDPKPGETVVDLAAAPGGKTT-HLAE-LMKNKGKIYAFDVDKMRMKRLKDFVKRMG-I-KIVKPLVKDARKAPEIIGEE 329 (450)
T ss_dssp HHCCCTTCEEEESSCTTCHHHH-HHHH-HTTTCSEEEEECSCHHHHHHHHHHHHHTT-C-CSEEEECSCTTCCSSSSCSS
T ss_pred hcCCCCcCEEEEeCCCccHHHH-HHHH-HcCCCCEEEEEcCCHHHHHHHHHHHHHcC-C-CcEEEEEcChhhcchhhccC
Confidence 4456789999999999976665 5555 3455 899999999999999999999999 5 57999999998765323 4
Q ss_pred CcceEEecccc---CC---hhhH----------------HHHHHHHHhhcccCeEEEEEc
Q 041205 203 EYDCIILAALA---GN---EEEK----------------AKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 203 ~FDvVfiaALV---gm---~edK----------------~~VL~eL~rvLKPGGvLVvRs 240 (535)
.||+|++++-- |+ .++. ..++.++.+.|||||+|++-+
T Consensus 330 ~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 330 VADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp CEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 69999986322 11 1121 679999999999999999865
No 212
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.16 E-value=1.1e-10 Score=116.33 Aligned_cols=113 Identities=13% Similarity=0.110 Sum_probs=90.2
Q ss_pred HHHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccc
Q 041205 117 KLEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIME 196 (535)
Q Consensus 117 rlE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~e 196 (535)
..|...+.... .++++|||+|||.+++| +.+|++ ..++|+++|+||.+++.++++++..| ++++|+++++|+.+
T Consensus 113 ~~er~ri~~~~--~~g~~VlD~~aG~G~~~-i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~-v~~~v~~~~~D~~~ 186 (278)
T 3k6r_A 113 VKERVRMAKVA--KPDELVVDMFAGIGHLS-LPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNK-VEDRMSAYNMDNRD 186 (278)
T ss_dssp HHHHHHHHHHC--CTTCEEEETTCTTTTTT-HHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCTTT
T ss_pred HHHHHHHHHhc--CCCCEEEEecCcCcHHH-HHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEeCcHHH
Confidence 35555555433 68999999999976655 667773 45799999999999999999999999 88999999999988
Q ss_pred cccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 197 VKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 197 l~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+... +.||.|++.-.. ....++....+.++|||+|.+..
T Consensus 187 ~~~~-~~~D~Vi~~~p~----~~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 187 FPGE-NIADRILMGYVV----RTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp CCCC-SCEEEEEECCCS----SGGGGHHHHHHHEEEEEEEEEEE
T ss_pred hccc-cCCCEEEECCCC----cHHHHHHHHHHHcCCCCEEEEEe
Confidence 6543 569999986333 34568888999999999987754
No 213
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.16 E-value=2.5e-10 Score=103.28 Aligned_cols=98 Identities=17% Similarity=0.220 Sum_probs=71.8
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCC--CcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc--------
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMK--STHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK-------- 198 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~--Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~-------- 198 (535)
+.++.+|||||||++++| +.++++ .+ +++|+|+|+++.+ . . .+++|+++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~-~~l~~~-~~~~~~~v~gvD~s~~~-----------~-~-~~v~~~~~d~~~~~~~~~~~~~ 84 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWC-QVILER-TKNYKNKIIGIDKKIMD-----------P-I-PNVYFIQGEIGKDNMNNIKNIN 84 (201)
T ss_dssp CCTTEEEEEESCTTCHHH-HHHHHH-TTTSCEEEEEEESSCCC-----------C-C-TTCEEEECCTTTTSSCCC----
T ss_pred CCCCCEEEEeCCCCCHHH-HHHHHH-cCCCCceEEEEeCCccC-----------C-C-CCceEEEccccchhhhhhcccc
Confidence 467899999999986555 566663 45 7999999999942 2 1 46899999998754
Q ss_pred -----------------cCCCCcceEEeccccCC----hhhH-------HHHHHHHHhhcccCeEEEEEcc
Q 041205 199 -----------------EKLGEYDCIILAALAGN----EEEK-------AKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 199 -----------------~dL~~FDvVfiaALVgm----~edK-------~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.....||+|+.+...+. ..+. ..++..+.+.|+|||.+++...
T Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 85 YIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp -------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 23357999998754322 1222 2488999999999999998543
No 214
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.15 E-value=1.3e-09 Score=99.16 Aligned_cols=100 Identities=16% Similarity=0.126 Sum_probs=80.0
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..++.+|||+|||+ |..++.+++. ...+|+|+|+|+.+++.|+++++..| + +++|+++|+.+++ ..||+|+
T Consensus 47 ~~~~~~vlD~g~G~-G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~---~~~D~v~ 117 (207)
T 1wy7_A 47 DIEGKVVADLGAGT-GVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFK-G--KFKVFIGDVSEFN---SRVDIVI 117 (207)
T ss_dssp SSTTCEEEEETCTT-CHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGT-T--SEEEEESCGGGCC---CCCSEEE
T ss_pred CCCcCEEEEeeCCC-CHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcC-C--CEEEEECchHHcC---CCCCEEE
Confidence 45789999999996 5566777772 33589999999999999999999988 5 8999999998753 4799999
Q ss_pred eccccCC--hhhHHHHHHHHHhhcccCeEEEEE
Q 041205 209 LAALAGN--EEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 209 iaALVgm--~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
++...+. ......+++.+.+.+ |+++++.
T Consensus 118 ~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 118 MNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp ECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred EcCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 8755443 234567899999988 7777665
No 215
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.15 E-value=8.6e-11 Score=124.46 Aligned_cols=112 Identities=17% Similarity=0.144 Sum_probs=88.0
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc-CCCCc
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE-KLGEY 204 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~-dL~~F 204 (535)
.+...++++|||+||||++.|. .+|.....+++|+++|+|+.+++.+++++++.| + .+|.++++|+.++.. ..+.|
T Consensus 100 ~L~~~~g~~VLDlcaGpGgkt~-~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g-~-~nv~v~~~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 100 AAAAKPGEKVLDLCAAPGGKST-QLAAQMKGKGLLVTNEIFPKRAKILSENIERWG-V-SNAIVTNHAPAELVPHFSGFF 176 (456)
T ss_dssp HHCCCTTCEEEESSCTTCHHHH-HHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT-C-SSEEEECCCHHHHHHHHTTCE
T ss_pred HcCCCCCCEEEEECCCcCHHHH-HHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CceEEEeCCHHHhhhhccccC
Confidence 4456889999999999976664 555533445899999999999999999999999 5 479999999987653 23579
Q ss_pred ceEEecccc---CC---hh----------------hHHHHHHHHHhhcccCeEEEEEc
Q 041205 205 DCIILAALA---GN---EE----------------EKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 205 DvVfiaALV---gm---~e----------------dK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|+|++++-- |+ .+ .-.++|.++.+.|||||+|++-+
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999997541 21 11 11288999999999999999855
No 216
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.15 E-value=1.3e-10 Score=123.24 Aligned_cols=111 Identities=14% Similarity=0.155 Sum_probs=87.0
Q ss_pred hCCC--CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc-CCCC
Q 041205 127 TGVA--QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE-KLGE 203 (535)
Q Consensus 127 ~~l~--~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~-dL~~ 203 (535)
+... ++.+|||+||||++.|. .+|.....+++|+++|+|+.+++.+++++++.| + .+|.++++|+.++.. ..+.
T Consensus 111 L~~~~~~g~~VLDl~aGpG~kt~-~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g-~-~nv~~~~~D~~~~~~~~~~~ 187 (479)
T 2frx_A 111 LFADGNAPQRVMDVAAAPGSKTT-QISARMNNEGAILANEFSASRVKVLHANISRCG-I-SNVALTHFDGRVFGAAVPEM 187 (479)
T ss_dssp HTTTTCCCSEEEESSCTTSHHHH-HHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT-C-CSEEEECCCSTTHHHHSTTC
T ss_pred hCcccCCCCEEEEeCCCCCHHHH-HHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEeCCHHHhhhhcccc
Confidence 3445 89999999999976665 556633346899999999999999999999999 5 479999999987654 3356
Q ss_pred cceEEecccc---CC---hh----------------hHHHHHHHHHhhcccCeEEEEEc
Q 041205 204 YDCIILAALA---GN---EE----------------EKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 204 FDvVfiaALV---gm---~e----------------dK~~VL~eL~rvLKPGGvLVvRs 240 (535)
||+|++++-- |+ .+ ...++|.++.+.|||||+|++-+
T Consensus 188 fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp EEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 9999996322 21 01 13578999999999999999865
No 217
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.15 E-value=2.2e-10 Score=114.87 Aligned_cols=107 Identities=15% Similarity=0.238 Sum_probs=80.0
Q ss_pred CCCEEEEEccCC--ChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc----C--CC
Q 041205 131 QLKKVAFVGSGP--MPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE----K--LG 202 (535)
Q Consensus 131 ~pkRVLeIGSGp--lPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~----d--L~ 202 (535)
...+|||||||. .|.+. .+|++..|+++|++||.|+.|++.||+++...+ ..+++|+++|+.+... . ..
T Consensus 78 g~~q~LDLGcG~pT~~~~~-~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~--~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLH-EIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP--EGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CCCEEEEESCCSCCSSCHH-HHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS--SSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred CCCEEEEeCCCCCcccHHH-HHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC--CCcEEEEEecccChhhhhccccccc
Confidence 458999999994 34443 344445789999999999999999999987654 2579999999987521 0 12
Q ss_pred Ccc-----eEEeccccCChhh---HHHHHHHHHhhcccCeEEEEEc
Q 041205 203 EYD-----CIILAALAGNEEE---KAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 203 ~FD-----vVfiaALVgm~ed---K~~VL~eL~rvLKPGGvLVvRs 240 (535)
.|| .|++.+.+|+.++ ...++..+++.|+|||+|++..
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 344 4555555555233 5789999999999999999875
No 218
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.14 E-value=1.2e-10 Score=116.61 Aligned_cols=108 Identities=12% Similarity=0.081 Sum_probs=90.8
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcC----CCcEEEEEeCCh--------------------------hHHHHHHHHHhh
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHM----KSTHFDNIDIDE--------------------------TANNLARRIVSS 179 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l----~Ga~VtGIDIDp--------------------------eAIelAR~li~~ 179 (535)
..+.+|||||+. .|+|+++||.... ++.+|+++|..+ ..++.+++++++
T Consensus 105 ~~pg~IlEiGv~-~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~ 183 (282)
T 2wk1_A 105 NVPGDLVETGVW-RGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN 183 (282)
T ss_dssp TCCCEEEEECCT-TSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH
T ss_pred CCCCcEEEeecC-chHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH
Confidence 568899999997 7999999987321 588999999642 257889999999
Q ss_pred cCCc-CCCeEEEEccccccccCC--CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 180 DDEI-EKRMKFLTCDIMEVKEKL--GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 180 lG~L-s~rI~Fi~GDA~el~~dL--~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.| + .++|+++.||+.+.+... +.||+||+|+.+. +....+|+.+.++|+|||+|++++.
T Consensus 184 ~g-l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y--~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 184 YD-LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY--ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TT-CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH--HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred cC-CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc--ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 99 7 489999999998866554 4699999998763 4567899999999999999999986
No 219
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.13 E-value=1.6e-10 Score=118.12 Aligned_cols=108 Identities=19% Similarity=0.215 Sum_probs=86.8
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCc-CCCeEEEEccccccccC----CCCc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEI-EKRMKFLTCDIMEVKEK----LGEY 204 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~L-s~rI~Fi~GDA~el~~d----L~~F 204 (535)
.++++|||+|||+++ -++.+|+. ...+|+|||+|+++++.|+++++..| + .++++|+++|+.+.... ...|
T Consensus 219 ~~~~~VLDl~cG~G~-~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 219 VENKRVLNCFSYTGG-FAVSALMG--GCSQVVSVDTSQEALDIARQNVELNK-LDLSKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp CTTCEEEEESCTTCS-HHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEeeccCCH-HHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECCHHHHHHHHHhcCCCC
Confidence 478999999999754 55677772 24699999999999999999999988 6 55899999999876543 2469
Q ss_pred ceEEecccc---------CChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 205 DCIILAALA---------GNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 205 DvVfiaALV---------gm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
|+|+++.-. ........++..+.+.|+|||+|++-+.
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999997321 1125778999999999999999988653
No 220
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.13 E-value=2.2e-10 Score=116.64 Aligned_cols=113 Identities=18% Similarity=0.091 Sum_probs=86.8
Q ss_pred HHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC
Q 041205 121 GALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK 200 (535)
Q Consensus 121 ~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d 200 (535)
..+.... ..++.+|||+|||+ |..++.+|. ..+.++|+|+|+|+.+++.|+++++..| +.++|+|+++|+.+++..
T Consensus 208 ~~l~~~~-~~~~~~vLD~gCGs-G~~~i~~a~-~~~~~~v~g~Dis~~~l~~A~~n~~~~g-l~~~i~~~~~D~~~~~~~ 283 (373)
T 3tm4_A 208 NAMIELA-ELDGGSVLDPMCGS-GTILIELAL-RRYSGEIIGIEKYRKHLIGAEMNALAAG-VLDKIKFIQGDATQLSQY 283 (373)
T ss_dssp HHHHHHH-TCCSCCEEETTCTT-CHHHHHHHH-TTCCSCEEEEESCHHHHHHHHHHHHHTT-CGGGCEEEECCGGGGGGT
T ss_pred HHHHHhh-cCCCCEEEEccCcC-cHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHHcC-CCCceEEEECChhhCCcc
Confidence 3333334 57889999999996 566677777 3444599999999999999999999999 778999999999998876
Q ss_pred CCCcceEEeccccCC--------hhhHHHHHHHHHhhcccCeEEEE
Q 041205 201 LGEYDCIILAALAGN--------EEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 201 L~~FDvVfiaALVgm--------~edK~~VL~eL~rvLKPGGvLVv 238 (535)
.+.||+|+++-..|. ..-+..+++.+.++| +|+.+++
T Consensus 284 ~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i 328 (373)
T 3tm4_A 284 VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI 328 (373)
T ss_dssp CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE
T ss_pred cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE
Confidence 678999999644321 233578899999988 4333333
No 221
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.12 E-value=1.5e-10 Score=118.00 Aligned_cols=108 Identities=22% Similarity=0.162 Sum_probs=86.7
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC----CCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK----LGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d----L~~FD 205 (535)
.++++|||+|||+ |.-++.+|+. ...+|+|+|+|+++++.|+++++..| +.++++|+++|+.+.... ...||
T Consensus 216 ~~~~~VLDl~~G~-G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~-~~~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 216 QPGDRVLDVFTYT-GGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNG-VEDRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp CTTCEEEETTCTT-THHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEecCCC-CHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEECCHHHHHHHHHhhCCCCC
Confidence 3789999999996 5556777772 33599999999999999999999988 666899999999876542 35799
Q ss_pred eEEecccc-CC--------hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALA-GN--------EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALV-gm--------~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|+++.-. +. ......++..+.+.|+|||+|++-+.
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 99997422 10 15678899999999999998888654
No 222
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.12 E-value=1.4e-10 Score=116.47 Aligned_cols=99 Identities=20% Similarity=0.255 Sum_probs=83.1
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++++|||+|||++++ ++. |+ .+.+|+|+|+|+.+++.|+++++..| +.++++|+++|+.+.. +.||+|++
T Consensus 194 ~~~~~VLDlg~G~G~~-~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~-l~~~v~~~~~D~~~~~---~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPF-SIA-CK---NAKKIYAIDINPHAIELLKKNIKLNK-LEHKIIPILSDVREVD---VKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCTTSHH-HHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCGGGCC---CCEEEEEE
T ss_pred CCCCEEEEccCccCHH-HHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECChHHhc---CCCcEEEE
Confidence 5789999999997544 455 76 57899999999999999999999999 7779999999998765 67999999
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+-.. .-..++..+.+.|+|||.+++-+.
T Consensus 265 dpP~----~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 265 NLPK----FAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp CCTT----TGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred CCcH----hHHHHHHHHHHHcCCCCEEEEEEe
Confidence 7332 123889999999999999888653
No 223
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.11 E-value=2.6e-10 Score=118.01 Aligned_cols=110 Identities=17% Similarity=0.147 Sum_probs=86.5
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc--cCCCC
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK--EKLGE 203 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~--~dL~~ 203 (535)
.+...++.+|||+||||++.|. .+|+ ..++++|+++|+|+.+++.+++++++.| + +++++++|+.+.. ...+.
T Consensus 241 ~l~~~~g~~VLDlgaG~G~~t~-~la~-~~~~~~v~a~D~~~~~l~~~~~~~~~~g-~--~~~~~~~D~~~~~~~~~~~~ 315 (429)
T 1sqg_A 241 WLAPQNGEHILDLCAAPGGKTT-HILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLG-M--KATVKQGDGRYPSQWCGEQQ 315 (429)
T ss_dssp HHCCCTTCEEEEESCTTCHHHH-HHHH-HCTTCEEEEEESSTTTHHHHHHHHHHTT-C--CCEEEECCTTCTHHHHTTCC
T ss_pred HcCCCCcCeEEEECCCchHHHH-HHHH-HcCCCEEEEECCCHHHHHHHHHHHHHcC-C--CeEEEeCchhhchhhcccCC
Confidence 4456789999999999966665 5555 3566899999999999999999999999 4 5899999998765 23356
Q ss_pred cceEEecccc---CC---hhh----------------HHHHHHHHHhhcccCeEEEEEc
Q 041205 204 YDCIILAALA---GN---EEE----------------KAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 204 FDvVfiaALV---gm---~ed----------------K~~VL~eL~rvLKPGGvLVvRs 240 (535)
||+|++++-- |+ .++ ...++.++.+.|||||+|++-+
T Consensus 316 fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999986421 11 111 1588999999999999999865
No 224
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.10 E-value=1.5e-10 Score=104.40 Aligned_cols=93 Identities=11% Similarity=0.147 Sum_probs=72.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..++.+++ .+ +|+|||+|+++++. . .+++|+++|+.+ +...+.||+|+.
T Consensus 22 ~~~~~vLD~GcG~-G~~~~~l~~---~~-~v~gvD~s~~~~~~--------~---~~~~~~~~d~~~-~~~~~~fD~i~~ 84 (170)
T 3q87_B 22 LEMKIVLDLGTST-GVITEQLRK---RN-TVVSTDLNIRALES--------H---RGGNLVRADLLC-SINQESVDVVVF 84 (170)
T ss_dssp CCSCEEEEETCTT-CHHHHHHTT---TS-EEEEEESCHHHHHT--------C---SSSCEEECSTTT-TBCGGGCSEEEE
T ss_pred CCCCeEEEeccCc-cHHHHHHHh---cC-cEEEEECCHHHHhc--------c---cCCeEEECChhh-hcccCCCCEEEE
Confidence 5678999999996 677788877 34 99999999999987 2 468999999977 333367999998
Q ss_pred ccccCChh---------hHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGNEE---------EKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm~e---------dK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+... +...++..+.+.+ |||.+++-.
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 64443211 3467889999988 999998854
No 225
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.08 E-value=3e-10 Score=125.57 Aligned_cols=108 Identities=11% Similarity=0.203 Sum_probs=86.8
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcC-CCeEEEEccccccccC-CCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIE-KRMKFLTCDIMEVKEK-LGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls-~rI~Fi~GDA~el~~d-L~~FDvV 207 (535)
.++++|||+|||++++| +.+|. ....+|++||+|+.+++.|+++++..| +. ++++|+++|+.+.... .+.||+|
T Consensus 538 ~~g~~VLDlg~GtG~~s-l~aa~--~ga~~V~aVD~s~~al~~a~~N~~~ng-l~~~~v~~i~~D~~~~l~~~~~~fD~I 613 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSAT-VHAGL--GGARSTTTVDMSRTYLEWAERNLRLNG-LTGRAHRLIQADCLAWLREANEQFDLI 613 (703)
T ss_dssp CTTCEEEEESCTTCHHH-HHHHH--TTCSEEEEEESCHHHHHHHHHHHHHTT-CCSTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred cCCCcEEEeeechhHHH-HHHHH--CCCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEEecCHHHHHHhcCCCccEE
Confidence 46899999999986554 66666 123469999999999999999999999 66 6899999999885433 3569999
Q ss_pred Eecccc-----------CChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALA-----------GNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALV-----------gm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+++.-. ....++.+++..+.++|+|||+|++...
T Consensus 614 i~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp EECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 997421 1146888999999999999999997653
No 226
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.07 E-value=2.7e-10 Score=118.05 Aligned_cols=105 Identities=14% Similarity=0.085 Sum_probs=83.1
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC-CCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL-GEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL-~~FDvVf 208 (535)
.++++|||+|||++ .-++.+|+ .|+.|+++|+|+.+++.|+++++..| +. .+|+++|+.+..... +.||+|+
T Consensus 213 ~~g~~VLDlg~GtG-~~sl~~a~---~ga~V~avDis~~al~~a~~n~~~ng-~~--~~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 213 RPGERVLDVYSYVG-GFALRAAR---KGAYALAVDKDLEALGVLDQAALRLG-LR--VDIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp CTTCEEEEESCTTT-HHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHHT-CC--CEEEESCHHHHHHTCCCCEEEEE
T ss_pred cCCCeEEEcccchh-HHHHHHHH---cCCeEEEEECCHHHHHHHHHHHHHhC-CC--CcEEEccHHHHHHHhcCCCCEEE
Confidence 45899999999975 55577777 46779999999999999999999988 54 357799998865432 3499999
Q ss_pred ecccc-C--------ChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 209 LAALA-G--------NEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 209 iaALV-g--------m~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
++... . ....+.+++..+.+.|+|||+|++-+.
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 87432 0 024678999999999999999986553
No 227
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.07 E-value=3.5e-10 Score=115.23 Aligned_cols=105 Identities=17% Similarity=0.147 Sum_probs=85.8
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC----CCCcce
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK----LGEYDC 206 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d----L~~FDv 206 (535)
++++|||+|||+ |.-++.+|+. +.+|+|+|+|+.+++.|+++++..| +. +++|+++|+.+.... ...||+
T Consensus 209 ~~~~VLDlg~G~-G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~-~~-~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYA-GGFALHLALG---FREVVAVDSSAEALRRAEENARLNG-LG-NVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTT-THHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTT-CT-TEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeecc-CHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcC-CC-CceEEECCHHHHHHHHHhcCCCeeE
Confidence 789999999996 5556777773 6899999999999999999999999 54 499999999876543 357999
Q ss_pred EEecccc-CC--------hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 207 IILAALA-GN--------EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 207 VfiaALV-gm--------~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
|+++.-. +. ......++..+.+.|+|||+|++-+.
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9997432 10 25678899999999999999988653
No 228
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.06 E-value=4.5e-10 Score=116.41 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=82.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcC--CcC----CCeEEEEccccccccC---
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDD--EIE----KRMKFLTCDIMEVKEK--- 200 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG--~Ls----~rI~Fi~GDA~el~~d--- 200 (535)
..|++||+||||. |.++..+++ +. ..+|++||+|+++++.||+.+...+ .++ .+++++.+|+.+....
T Consensus 187 p~pkrVL~IGgG~-G~~arellk-~~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~ 263 (364)
T 2qfm_A 187 YTGKDVLILGGGD-GGILCEIVK-LK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 263 (364)
T ss_dssp CTTCEEEEEECTT-CHHHHHHHT-TC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEEECCh-hHHHHHHHH-CC-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc
Confidence 3689999999995 677777777 33 4899999999999999999987542 122 2799999999987653
Q ss_pred -CCCcceEEecccc---CChh---hHHHHHHHH----HhhcccCeEEEEEcc
Q 041205 201 -LGEYDCIILAALA---GNEE---EKAKILGHI----RKYMKEGGVLLVRSA 241 (535)
Q Consensus 201 -L~~FDvVfiaALV---gm~e---dK~~VL~eL----~rvLKPGGvLVvRsa 241 (535)
.+.||+||++... +..+ -..++++.+ .++|+|||++++.+.
T Consensus 264 ~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 264 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 3569999999753 2111 224566665 999999999999764
No 229
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.04 E-value=5.1e-10 Score=120.02 Aligned_cols=103 Identities=18% Similarity=0.190 Sum_probs=80.3
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc--CCCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE--KLGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~--dL~~FDvV 207 (535)
.+|-|||||||| +|+-+..||+ .|+.|||||+++.+++.|+..+...|. -+|+|+++|+.++.. ..+.||+|
T Consensus 65 ~~~~~vLDvGCG-~G~~~~~la~---~ga~V~giD~~~~~i~~a~~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCA-QGFFSLSLAS---KGATIVGIDFQQENINVCRALAEENPD--FAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCT-TSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHTSTT--SEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCC-CcHHHHHHHh---CCCEEEEECCCHHHHHHHHHHHHhcCC--CceEEEECCHHHHhhhccCCCccEE
Confidence 467899999999 6889999999 599999999999999999999988873 479999999988743 34579999
Q ss_pred EeccccCChhhHH--HHHHHHHhhcccCeEEEE
Q 041205 208 ILAALAGNEEEKA--KILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 208 fiaALVgm~edK~--~VL~eL~rvLKPGGvLVv 238 (535)
+....+++.++.. .-+..+.+.++++|.-.+
T Consensus 139 ~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 139 IGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp EEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred EECcchhcCCCHHHHHHHHHHHHHhccccceee
Confidence 9876654333333 334456777888764443
No 230
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.04 E-value=5.8e-10 Score=109.70 Aligned_cols=82 Identities=15% Similarity=0.231 Sum_probs=65.1
Q ss_pred HhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCc
Q 041205 125 ENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEY 204 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~F 204 (535)
..+.+.++++|||||||++.+ +..+++ .+.+|+|||+|+.+++.+++.+...| +..+++|+++|+.+++ +..|
T Consensus 22 ~~~~~~~~~~VLDiG~G~G~l-t~~L~~---~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~D~~~~~--~~~f 94 (285)
T 1zq9_A 22 DKAALRPTDVVLEVGPGTGNM-TVKLLE---KAKKVVACELDPRLVAELHKRVQGTP-VASKLQVLVGDVLKTD--LPFF 94 (285)
T ss_dssp HHTCCCTTCEEEEECCTTSTT-HHHHHH---HSSEEEEEESCHHHHHHHHHHHTTST-TGGGEEEEESCTTTSC--CCCC
T ss_pred HhcCCCCCCEEEEEcCcccHH-HHHHHh---hCCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEEcceeccc--chhh
Confidence 334557889999999997554 566666 25799999999999999999998877 5568999999997654 3479
Q ss_pred ceEEecccc
Q 041205 205 DCIILAALA 213 (535)
Q Consensus 205 DvVfiaALV 213 (535)
|+|+.....
T Consensus 95 D~vv~nlpy 103 (285)
T 1zq9_A 95 DTCVANLPY 103 (285)
T ss_dssp SEEEEECCG
T ss_pred cEEEEecCc
Confidence 999985433
No 231
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.04 E-value=5.3e-10 Score=112.38 Aligned_cols=183 Identities=10% Similarity=0.106 Sum_probs=114.8
Q ss_pred CchhHHHHHHHHHHhhcCCcchhhhcCChHHHHHHHHHHHHHHHHhHhhhhHHHhHhhccCCCccccccCccchhhHHhH
Q 041205 37 PSKQVNILFSHLVKLCILPSSIDIKALPQEVQQMRQSLIILCARAESLLELEFATYLSKISLPLNDLNRFPYYENYVKLA 116 (535)
Q Consensus 37 PS~~VNaLFt~LV~lC~~~~~~dv~~l~~~vq~l~~~Lr~lca~AE~~LE~h~A~~Lls~~~pl~~L~~FpYy~NYv~Li 116 (535)
|-+.+.+.-.+|-..|.-..+ ...|....+..+|++...-+.-..=+.|..++++.-.+.. +.-|.|+..
T Consensus 53 ~~~a~k~~k~~LH~i~ga~~~----~~~~~~~~~l~~l~~~~~~~d~~~~~~~~~~~l~~H~STr--eRLp~lD~f---- 122 (281)
T 3lcv_B 53 VPDAVKRTKRGLHEIYGAFLP----PSPPNYAALLRHLDSAVDAGDDEAVRAALLRAMSVHISTR--ERLPHLDEF---- 122 (281)
T ss_dssp HHHHHHHHHHHHHHHTGGGSC----SSCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTTSHHHH--HHGGGHHHH----
T ss_pred HHHHHHHHHHHHHHHHHHhcC----CCCccHHHHHHHHHhhcccCChHHHHHHHHHHHhcCCCHH--HHhHhHHHH----
Confidence 334566666666666653211 0112333444444433222222222555555555432211 122443332
Q ss_pred HHHHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccc
Q 041205 117 KLEYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIME 196 (535)
Q Consensus 117 rlE~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~e 196 (535)
+..+... +.++.+|||||||.+|++..++.. .+.++|+++|+|+.+++.+++++..+| + +.+|..+|...
T Consensus 123 ---Y~~i~~~--i~~p~~VLDLGCG~GpLAl~~~~~--~p~a~y~a~DId~~~le~a~~~l~~~g-~--~~~~~v~D~~~ 192 (281)
T 3lcv_B 123 ---YRELFRH--LPRPNTLRDLACGLNPLAAPWMGL--PAETVYIASDIDARLVGFVDEALTRLN-V--PHRTNVADLLE 192 (281)
T ss_dssp ---HHHHGGG--SCCCSEEEETTCTTGGGCCTTTTC--CTTCEEEEEESBHHHHHHHHHHHHHTT-C--CEEEEECCTTT
T ss_pred ---HHHHHhc--cCCCceeeeeccCccHHHHHHHhh--CCCCEEEEEeCCHHHHHHHHHHHHhcC-C--CceEEEeeecc
Confidence 2222222 256899999999998888777643 589999999999999999999999999 4 47899999764
Q ss_pred cccCCCCcceEEeccccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 197 VKEKLGEYDCIILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 197 l~~dL~~FDvVfiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.+ .-+.||+|++.-.++. ...|...+ .+...|+|||++|....
T Consensus 193 ~~-p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 193 DR-LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp SC-CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred cC-CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 33 3356999998655543 45555666 89999999999998664
No 232
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.03 E-value=3.5e-09 Score=96.33 Aligned_cols=99 Identities=19% Similarity=0.243 Sum_probs=74.8
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceE
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCI 207 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvV 207 (535)
...++.+|||+|||+ |..++.+++. +..+|+|||+|+++++.|++++. +++|+++|+.+++ +.||+|
T Consensus 48 ~~~~~~~vlD~gcG~-G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-------~~~~~~~d~~~~~---~~~D~v 114 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGN-GILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-------GVNFMVADVSEIS---GKYDTW 114 (200)
T ss_dssp TSSBTSEEEEETCTT-CHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-------TSEEEECCGGGCC---CCEEEE
T ss_pred CCCCCCEEEEEeCCc-cHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-------CCEEEECcHHHCC---CCeeEE
Confidence 345789999999996 5666777772 33479999999999999999865 4799999998753 579999
Q ss_pred EeccccCC--hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALAGN--EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVgm--~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+++...+. ......+++.+.+.+ |+++++.+.
T Consensus 115 ~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~~ 148 (200)
T 1ne2_A 115 IMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGNA 148 (200)
T ss_dssp EECCCC-------CHHHHHHHHHHE--EEEEEEEEG
T ss_pred EECCCchhccCchhHHHHHHHHHhc--CcEEEEEcC
Confidence 99865543 122357899999988 776666554
No 233
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.03 E-value=5.5e-10 Score=112.47 Aligned_cols=98 Identities=16% Similarity=0.215 Sum_probs=77.6
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
+.++.+|||||||+ |..+..+++ ..|+.+++++|+ +.+++.|++. .+|+|+.+|+.+ +. ..||+|+
T Consensus 207 ~~~~~~vLDvG~G~-G~~~~~l~~-~~~~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~-~~--~~~D~v~ 272 (372)
T 1fp1_D 207 FEGISTLVDVGGGS-GRNLELIIS-KYPLIKGINFDL-PQVIENAPPL--------SGIEHVGGDMFA-SV--PQGDAMI 272 (372)
T ss_dssp TTTCSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTT-CC--CCEEEEE
T ss_pred cCCCCEEEEeCCCC-cHHHHHHHH-HCCCCeEEEeCh-HHHHHhhhhc--------CCCEEEeCCccc-CC--CCCCEEE
Confidence 56789999999996 566677777 368899999999 9998877641 369999999876 32 3499999
Q ss_pred eccccCChhhH--HHHHHHHHhhcccCeEEEEEc
Q 041205 209 LAALAGNEEEK--AKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 209 iaALVgm~edK--~~VL~eL~rvLKPGGvLVvRs 240 (535)
+....+..++. ..+|+++++.|+|||+|++.+
T Consensus 273 ~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 273 LKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp EESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 87666543444 499999999999999998864
No 234
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.02 E-value=4.7e-10 Score=115.72 Aligned_cols=102 Identities=21% Similarity=0.146 Sum_probs=83.4
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc---------------CCcCCCeEEEEcccc
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD---------------DEIEKRMKFLTCDIM 195 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l---------------G~Ls~rI~Fi~GDA~ 195 (535)
++.+|||+|||+ |.-++.+|++ .++.+|+++|+|+++++.++++++.. | +. +++++++|+.
T Consensus 47 ~~~~VLDl~aGt-G~~~l~~a~~-~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~g-l~-~i~v~~~Da~ 122 (378)
T 2dul_A 47 NPKIVLDALSAT-GIRGIRFALE-TPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKG-EK-TIVINHDDAN 122 (378)
T ss_dssp CCSEEEESSCTT-SHHHHHHHHH-SSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEES-SS-EEEEEESCHH
T ss_pred CCCEEEECCCch-hHHHHHHHHh-CCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccC-CC-ceEEEcCcHH
Confidence 689999999997 5566777773 46678999999999999999999988 7 54 3999999998
Q ss_pred ccccCC-CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 196 EVKEKL-GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 196 el~~dL-~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
++.... ..||+|+++.. + ....+++.+.+.++|||+|++..
T Consensus 123 ~~~~~~~~~fD~I~lDP~-~---~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 123 RLMAERHRYFHFIDLDPF-G---SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHSTTCEEEEEECCS-S---CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhccCCCCEEEeCCC-C---CHHHHHHHHHHhcCCCCEEEEEe
Confidence 765543 46999998853 2 23689999999999999887753
No 235
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.02 E-value=1.2e-09 Score=98.23 Aligned_cols=98 Identities=15% Similarity=0.232 Sum_probs=71.5
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCC---------cEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEE-Eccccccc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKS---------THFDNIDIDETANNLARRIVSSDDEIEKRMKFL-TCDIMEVK 198 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~G---------a~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi-~GDA~el~ 198 (535)
+.++.+|||||||+ |..++.++++ .+. ++|+|+|+++.+ + + .+++++ ++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~~~~~~~~~~~v~~vD~s~~~-----------~-~-~~~~~~~~~d~~~~~ 84 (196)
T 2nyu_A 20 LRPGLRVLDCGAAP-GAWSQVAVQK-VNAAGTDPSSPVGFVLGVDLLHIF-----------P-L-EGATFLCPADVTDPR 84 (196)
T ss_dssp CCTTCEEEEETCCS-CHHHHHHHHH-TTTTCCCTTSCCCEEEEECSSCCC-----------C-C-TTCEEECSCCTTSHH
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHH-hccccccccCCCceEEEEechhcc-----------c-C-CCCeEEEeccCCCHH
Confidence 46789999999998 6666777774 332 899999999942 2 2 468999 99986543
Q ss_pred c--------CCCCcceEEecccc---CC-hhhH-------HHHHHHHHhhcccCeEEEEEcc
Q 041205 199 E--------KLGEYDCIILAALA---GN-EEEK-------AKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 199 ~--------dL~~FDvVfiaALV---gm-~edK-------~~VL~eL~rvLKPGGvLVvRsa 241 (535)
. +...||+|+.+... +. ..+. ..++.++.++|+|||.|++...
T Consensus 85 ~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 85 TSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 1 12469999975422 22 2233 5889999999999999998754
No 236
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.02 E-value=4.9e-10 Score=113.80 Aligned_cols=99 Identities=12% Similarity=0.121 Sum_probs=77.8
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC---------
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL--------- 201 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL--------- 201 (535)
.+.+|||+|||+ |.-++.+|+ ...+|+|||+|+++++.|+++++..| + ++++|+++|+.++...+
T Consensus 213 ~~~~vLDl~cG~-G~~~l~la~---~~~~V~gvd~~~~ai~~a~~n~~~ng-~-~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 213 SKGDLLELYCGN-GNFSLALAR---NFDRVLATEIAKPSVAAAQYNIAANH-I-DNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CCSEEEEESCTT-SHHHHHHGG---GSSEEEEECCCHHHHHHHHHHHHHTT-C-CSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCCEEEEccCCC-CHHHHHHHh---cCCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEEECCHHHHHHHHhhccccccc
Confidence 368999999996 555578887 35799999999999999999999999 5 68999999998764321
Q ss_pred -------CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 202 -------GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 202 -------~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
..||+|+++- ++..+...+.+.++|||.+++-+-
T Consensus 287 ~~~~~~~~~fD~Vv~dP------Pr~g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDP------PRSGLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp GGSCGGGCCEEEEEECC------CTTCCCHHHHHHHTTSSEEEEEES
T ss_pred cccccccCCCCEEEECc------CccccHHHHHHHHhCCCEEEEEEC
Confidence 2699999873 333445566777789998888763
No 237
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.01 E-value=8.5e-10 Score=111.65 Aligned_cols=98 Identities=17% Similarity=0.244 Sum_probs=78.4
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..+..+|||||||+ |..++.+++ .+|+.+++++|+ +++++.|++. .+|+|+.+|..+ +.+ .. |+|+
T Consensus 201 ~~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~-~~p-~~-D~v~ 266 (368)
T 3reo_A 201 FEGLTTIVDVGGGT-GAVASMIVA-KYPSINAINFDL-PHVIQDAPAF--------SGVEHLGGDMFD-GVP-KG-DAIF 266 (368)
T ss_dssp TTTCSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTT-CCC-CC-SEEE
T ss_pred ccCCCEEEEeCCCc-CHHHHHHHH-hCCCCEEEEEeh-HHHHHhhhhc--------CCCEEEecCCCC-CCC-CC-CEEE
Confidence 56779999999996 667777777 478999999999 8888766531 479999999876 333 23 9999
Q ss_pred eccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 209 LAALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 209 iaALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+...+|. .++..++|+++++.|+|||+|++.+
T Consensus 267 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 267 IKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 8766653 4566799999999999999998865
No 238
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.01 E-value=1.9e-10 Score=102.67 Aligned_cols=90 Identities=18% Similarity=0.302 Sum_probs=74.8
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc---CCCCc
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE---KLGEY 204 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~---dL~~F 204 (535)
++.++.+||+||||. +++|++++|++.|++.+. .+++|+++|+.+++. ..+.|
T Consensus 9 g~~~g~~vL~~~~g~------------------v~vD~s~~ml~~a~~~~~------~~~~~~~~d~~~~~~~~~~~~~f 64 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS------------------SPVEALKGLVDKLQALTG------NEGRVSVENIKQLLQSAHKESSF 64 (176)
T ss_dssp TCCTTSEEEEEECTT------------------SCHHHHHHHHHHHHHHTT------TTSEEEEEEGGGGGGGCCCSSCE
T ss_pred CCCCCCEEEEecCCc------------------eeeeCCHHHHHHHHHhcc------cCcEEEEechhcCccccCCCCCE
Confidence 467899999999984 139999999999998753 248999999998776 55679
Q ss_pred ceEEeccccCCh-hhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 205 DCIILAALAGNE-EEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 205 DvVfiaALVgm~-edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
|+|+.....++. ++...++++++++|||||++++..+
T Consensus 65 D~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 999986555554 7889999999999999999999653
No 239
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.01 E-value=2.6e-09 Score=107.31 Aligned_cols=134 Identities=16% Similarity=0.118 Sum_probs=91.8
Q ss_pred cccCccchhhHHhHHHHHHHH-HHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcC
Q 041205 103 LNRFPYYENYVKLAKLEYGAL-IENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDD 181 (535)
Q Consensus 103 L~~FpYy~NYv~LirlE~~lL-~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG 181 (535)
+...|.|..-.-.++.+-..+ ...+.+.++++|||+||||++.|. .+|....++++|+++|+|+.+++.+++++++.|
T Consensus 73 ~~~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~-~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g 151 (309)
T 2b9e_A 73 LHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTS-HLAALLKNQGKIFAFDLDAKRLASMATLLARAG 151 (309)
T ss_dssp CTTSHHHHTTSEEECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHH-HHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT
T ss_pred cccChHHHCCeEEEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHH-HHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC
Confidence 334444443322333343222 223456789999999999977775 455533456899999999999999999999999
Q ss_pred CcCCCeEEEEccccccccCC---CCcceEEecccc---CC--h-hh------------------HHHHHHHHHhhcccCe
Q 041205 182 EIEKRMKFLTCDIMEVKEKL---GEYDCIILAALA---GN--E-EE------------------KAKILGHIRKYMKEGG 234 (535)
Q Consensus 182 ~Ls~rI~Fi~GDA~el~~dL---~~FDvVfiaALV---gm--~-ed------------------K~~VL~eL~rvLKPGG 234 (535)
+ .+|+++++|+.++.... ..||.|++++-- |+ . ++ -.++|.++.+.++ ||
T Consensus 152 -~-~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG 228 (309)
T 2b9e_A 152 -V-SCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQ 228 (309)
T ss_dssp -C-CSEEEEECCGGGSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CC
T ss_pred -C-CeEEEEeCChHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CC
Confidence 5 57999999998765432 469999997432 22 1 11 1247888888776 99
Q ss_pred EEEEEc
Q 041205 235 VLLVRS 240 (535)
Q Consensus 235 vLVvRs 240 (535)
+|++.+
T Consensus 229 ~lvYsT 234 (309)
T 2b9e_A 229 RLVYST 234 (309)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 888754
No 240
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.00 E-value=3.3e-09 Score=110.17 Aligned_cols=146 Identities=14% Similarity=0.154 Sum_probs=98.4
Q ss_pred HHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc
Q 041205 120 YGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 120 ~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~ 199 (535)
+..+...+...++.+|||+|||+ |.-++.+|+ .+.+|+|+|+|+++++.|+++++..| + .+++|+++|+.+...
T Consensus 275 ~~~~~~~l~~~~~~~VLDlgcG~-G~~~~~la~---~~~~V~gvD~s~~al~~A~~n~~~~~-~-~~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 275 VARALEWLDVQPEDRVLDLFCGM-GNFTLPLAT---QAASVVGVEGVPALVEKGQQNARLNG-L-QNVTFYHENLEEDVT 348 (433)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTT-TTTHHHHHT---TSSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEECCTTSCCS
T ss_pred HHHHHHhhcCCCCCEEEECCCCC-CHHHHHHHh---hCCEEEEEeCCHHHHHHHHHHHHHcC-C-CceEEEECCHHHHhh
Confidence 44444445556789999999995 777788888 37899999999999999999999988 5 489999999987432
Q ss_pred ----CCCCcceEEecccc-CChhhHHHHHHHHHhhcccCeEEEEEcc-cccccccCCCCcc-ccCCcEEEE--EEc--CC
Q 041205 200 ----KLGEYDCIILAALA-GNEEEKAKILGHIRKYMKEGGVLLVRSA-KGARAFLYPVVEH-ELFDFKVLS--IFH--PT 268 (535)
Q Consensus 200 ----dL~~FDvVfiaALV-gm~edK~~VL~eL~rvLKPGGvLVvRsa-~GlR~fLYP~Vdp-dl~GFeil~--v~h--P~ 268 (535)
..+.||+|+++--- |+ ..+++.+.+ ++|++++.+.-. ..+ ...... .-.||++.. .++ |.
T Consensus 349 ~~~~~~~~fD~Vv~dPPr~g~----~~~~~~l~~-~~p~~ivyvsc~p~tl----ard~~~l~~~Gy~~~~~~~~d~Fp~ 419 (433)
T 1uwv_A 349 KQPWAKNGFDKVLLDPARAGA----AGVMQQIIK-LEPIRIVYVSCNPATL----ARDSEALLKAGYTIARLAMLDMFPH 419 (433)
T ss_dssp SSGGGTTCCSEEEECCCTTCC----HHHHHHHHH-HCCSEEEEEESCHHHH----HHHHHHHHHTTCEEEEEEEECCSTT
T ss_pred hhhhhcCCCCEEEECCCCccH----HHHHHHHHh-cCCCeEEEEECChHHH----HhhHHHHHHCCcEEEEEEEeccCCC
Confidence 23469999997443 22 256776665 789887766321 111 000000 114777643 222 54
Q ss_pred CcceeeeEEEec
Q 041205 269 NDVINSVVLLQL 280 (535)
Q Consensus 269 ~eVINSVVvARK 280 (535)
..-+-++++.+|
T Consensus 420 t~HvE~v~ll~r 431 (433)
T 1uwv_A 420 TGHLESMVLFSR 431 (433)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCeEEEEEEEEE
Confidence 445567776654
No 241
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.00 E-value=1.2e-09 Score=110.59 Aligned_cols=98 Identities=16% Similarity=0.171 Sum_probs=78.7
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..+..+|||||||+ |..++.+++ .+|+.+++++|+ +++++.|++ ..+|+|+.+|..+ +.+. . |+|+
T Consensus 199 ~~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~--------~~~v~~~~~D~~~-~~p~-~-D~v~ 264 (364)
T 3p9c_A 199 FEGLGTLVDVGGGV-GATVAAIAA-HYPTIKGVNFDL-PHVISEAPQ--------FPGVTHVGGDMFK-EVPS-G-DTIL 264 (364)
T ss_dssp TTTCSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHTTCCC--------CTTEEEEECCTTT-CCCC-C-SEEE
T ss_pred ccCCCEEEEeCCCC-CHHHHHHHH-HCCCCeEEEecC-HHHHHhhhh--------cCCeEEEeCCcCC-CCCC-C-CEEE
Confidence 56789999999996 666677777 478999999999 888876653 1479999999876 4442 3 9999
Q ss_pred eccccC-C-hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 209 LAALAG-N-EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 209 iaALVg-m-~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+...+| + .++..++|+++++.|+|||+|++.+
T Consensus 265 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 265 MKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 877665 3 5667899999999999999998865
No 242
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.99 E-value=9.1e-11 Score=112.71 Aligned_cols=99 Identities=10% Similarity=0.055 Sum_probs=64.8
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCc-CCCeEEEE-ccccccccCCCCcceE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEI-EKRMKFLT-CDIMEVKEKLGEYDCI 207 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~L-s~rI~Fi~-GDA~el~~dL~~FDvV 207 (535)
..+++|||||||++ ..+.+++++ ...+|+|||++++|++.|++...+.+.. ..++.+.. +|....+++...||+|
T Consensus 36 ~~g~~VLDiGcGtG-~~t~~la~~--g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v 112 (232)
T 3opn_A 36 INGKTCLDIGSSTG-GFTDVMLQN--GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVS 112 (232)
T ss_dssp CTTCEEEEETCTTS-HHHHHHHHT--TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCS
T ss_pred CCCCEEEEEccCCC-HHHHHHHhc--CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEE
Confidence 45789999999975 555677772 2259999999999999988865543200 12343433 2221101222235555
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
|+. -..++.+++++|||||.+++-
T Consensus 113 ~~~--------l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 113 FIS--------LDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp SSC--------GGGTHHHHHHHSCTTCEEEEE
T ss_pred hhh--------HHHHHHHHHHhccCCCEEEEE
Confidence 543 167999999999999988874
No 243
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.98 E-value=8.3e-10 Score=110.16 Aligned_cols=98 Identities=14% Similarity=0.242 Sum_probs=77.2
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
+.++.+|||||||+ |..+..+++ .+|+.+|+++|+ +.+++.|++ . .+|+|+.+|+.+ + ...||+|+
T Consensus 186 ~~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~----~----~~v~~~~~d~~~-~--~p~~D~v~ 251 (352)
T 1fp2_A 186 FDGLESIVDVGGGT-GTTAKIICE-TFPKLKCIVFDR-PQVVENLSG----S----NNLTYVGGDMFT-S--IPNADAVL 251 (352)
T ss_dssp HTTCSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHTTCCC----B----TTEEEEECCTTT-C--CCCCSEEE
T ss_pred cccCceEEEeCCCc-cHHHHHHHH-HCCCCeEEEeeC-HHHHhhccc----C----CCcEEEeccccC-C--CCCccEEE
Confidence 35679999999996 666677777 468899999999 999887764 1 259999999865 2 23499999
Q ss_pred eccccCC--hhhHHHHHHHHHhhccc---CeEEEEEc
Q 041205 209 LAALAGN--EEEKAKILGHIRKYMKE---GGVLLVRS 240 (535)
Q Consensus 209 iaALVgm--~edK~~VL~eL~rvLKP---GGvLVvRs 240 (535)
+....+. .++..++|+++++.|+| ||+|++.+
T Consensus 252 ~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 252 LKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred eehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 8766653 33444999999999999 99988865
No 244
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.98 E-value=2e-09 Score=106.90 Aligned_cols=101 Identities=12% Similarity=0.107 Sum_probs=80.9
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||.+|++.-++ ++.+++++|||+.+++.+++++...| .+.+|..+|....+.. +.||+|++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-----~~~~y~a~DId~~~i~~ar~~~~~~g---~~~~~~v~D~~~~~~~-~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-----GIASVWGCDIHQGLGDVITPFAREKD---WDFTFALQDVLCAPPA-EAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-----TCSEEEEEESBHHHHHHHHHHHHHTT---CEEEEEECCTTTSCCC-CBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc-----cCCeEEEEeCCHHHHHHHHHHHHhcC---CCceEEEeecccCCCC-CCcchHHH
Confidence 578999999999887776544 78999999999999999999998888 4789999998765433 47999987
Q ss_pred ccccCC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.-.+++ ..++...+ .+...|++++++|.-.
T Consensus 175 lk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 175 FKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp ESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 644443 44555555 8888999999998865
No 245
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.97 E-value=2.3e-09 Score=99.51 Aligned_cols=132 Identities=21% Similarity=0.330 Sum_probs=87.0
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC--------
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK-------- 200 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d-------- 200 (535)
+.++.+|||+||||+++| ..+|++ +++|+|||+++.. . + .+++|+++|+.+....
T Consensus 23 ~~~g~~VLDlG~G~G~~s-~~la~~---~~~V~gvD~~~~~-----------~-~-~~v~~~~~D~~~~~~~~~~~~~~~ 85 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWT-QVLNSL---ARKIISIDLQEME-----------E-I-AGVRFIRCDIFKETIFDDIDRALR 85 (191)
T ss_dssp SCTTCEEEEESCTTCHHH-HHHTTT---CSEEEEEESSCCC-----------C-C-TTCEEEECCTTSSSHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHH-HHHHHc---CCcEEEEeccccc-----------c-C-CCeEEEEccccCHHHHHHHHHHhh
Confidence 468899999999996666 567772 8999999999852 2 2 4799999999764310
Q ss_pred ---CCCcceEEecccc---CC-h-------hhHHHHHHHHHhhcccCeEEEEEcccccccccCCCCcccc-CCcEEEEEE
Q 041205 201 ---LGEYDCIILAALA---GN-E-------EEKAKILGHIRKYMKEGGVLLVRSAKGARAFLYPVVEHEL-FDFKVLSIF 265 (535)
Q Consensus 201 ---L~~FDvVfiaALV---gm-~-------edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~Vdpdl-~GFeil~v~ 265 (535)
.+.||+|+.+... |. . +....++..+.++|||||.|++....|-. ++.+-..+ ..|..+.+.
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~---~~~~~~~l~~~F~~v~~~ 162 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM---TNDFIAIWRKNFSSYKIS 162 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH---HHHHHHHHGGGEEEEEEE
T ss_pred cccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC---HHHHHHHHHHhcCEEEEE
Confidence 0379999987432 22 1 12357888999999999999987654421 11111112 358877777
Q ss_pred cCCCc---ceeeeEEEec
Q 041205 266 HPTND---VINSVVLLQL 280 (535)
Q Consensus 266 hP~~e---VINSVVvARK 280 (535)
.|... -.-.++|++.
T Consensus 163 kP~asR~~s~E~y~v~~~ 180 (191)
T 3dou_A 163 KPPASRGSSSEIYIMFFG 180 (191)
T ss_dssp CC------CCEEEEEEEE
T ss_pred CCCCccCCCceEEEEEee
Confidence 77542 2223777764
No 246
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.95 E-value=2.5e-09 Score=105.16 Aligned_cols=140 Identities=16% Similarity=0.158 Sum_probs=95.5
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhc------CCC-----cEEEEEeCCh--------------hHHHHHHHHHhhc----
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQH------MKS-----THFDNIDIDE--------------TANNLARRIVSSD---- 180 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~------l~G-----a~VtGIDIDp--------------eAIelAR~li~~l---- 180 (535)
.++.+|||||+| +|++++.+++.. .|+ .+|+++|.+| +..+.|+++++..
T Consensus 59 ~~~~~ILEiGfG-tG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 59 HPLFVVAESGFG-TGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSEEEEEESCCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCEEEEECCC-hHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 466899999999 699999987643 453 5899999997 4445778887651
Q ss_pred ------CCc---CCCeEEEEccccccccCCC-----CcceEEeccccCC-hhh--HHHHHHHHHhhcccCeEEEEEcccc
Q 041205 181 ------DEI---EKRMKFLTCDIMEVKEKLG-----EYDCIILAALAGN-EEE--KAKILGHIRKYMKEGGVLLVRSAKG 243 (535)
Q Consensus 181 ------G~L---s~rI~Fi~GDA~el~~dL~-----~FDvVfiaALVgm-~ed--K~~VL~eL~rvLKPGGvLVvRsa~G 243 (535)
+ + ..+++++.||+.+....+. .||+||+|+...- .++ ...+|+.+++.|+|||+|++-++.|
T Consensus 138 ~g~~r~~-~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa~ 216 (257)
T 2qy6_A 138 PGCHRLL-LDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAG 216 (257)
T ss_dssp SEEEEEE-EC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCBH
T ss_pred cchhhee-ccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 1 1 1468899999988655442 6999999975421 233 5789999999999999999855543
Q ss_pred cccccCCCCcc--ccCCcEEEEEEcCCCcceeeeEEEec
Q 041205 244 ARAFLYPVVEH--ELFDFKVLSIFHPTNDVINSVVLLQL 280 (535)
Q Consensus 244 lR~fLYP~Vdp--dl~GFeil~v~hP~~eVINSVVvARK 280 (535)
.|-. ...||++...--+. -....+.++|
T Consensus 217 -------~vrr~L~~aGF~v~~~~g~~--~kr~m~~a~~ 246 (257)
T 2qy6_A 217 -------FVRRGLQEAGFTMQKRKGFG--RKREMLCGVM 246 (257)
T ss_dssp -------HHHHHHHHHTEEEEEECCST--TCCCEEEEEE
T ss_pred -------HHHHHHHHCCCEEEeCCCCC--CCCceEEEEe
Confidence 1111 22699875332222 1234555555
No 247
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.94 E-value=1.4e-09 Score=113.12 Aligned_cols=104 Identities=16% Similarity=0.122 Sum_probs=84.4
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCC-cEEEEEeCChhHHHHHHHHHhhcCCcCCC-eEEEEcccccccc-CC-CCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKS-THFDNIDIDETANNLARRIVSSDDEIEKR-MKFLTCDIMEVKE-KL-GEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~G-a~VtGIDIDpeAIelAR~li~~lG~Ls~r-I~Fi~GDA~el~~-dL-~~FD 205 (535)
.++.+|||++||+++++ +.+|++ ..| .+|+++|+|+++++.++++++..| ++++ ++++++|+.++.. .. ..||
T Consensus 51 ~~g~~VLDlfaGtG~~s-l~aa~~-~~ga~~V~avDi~~~av~~~~~N~~~Ng-l~~~~v~v~~~Da~~~l~~~~~~~fD 127 (392)
T 3axs_A 51 GRPVKVADPLSASGIRA-IRFLLE-TSCVEKAYANDISSKAIEIMKENFKLNN-IPEDRYEIHGMEANFFLRKEWGFGFD 127 (392)
T ss_dssp CSCEEEEESSCTTSHHH-HHHHHH-CSCEEEEEEECSCHHHHHHHHHHHHHTT-CCGGGEEEECSCHHHHHHSCCSSCEE
T ss_pred CCCCEEEECCCcccHHH-HHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHhC-CCCceEEEEeCCHHHHHHHhhCCCCc
Confidence 35799999999976555 566663 345 689999999999999999999999 7666 9999999988765 44 3599
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|+++. .+ ....+++.+.+.|+|||+|++-.
T Consensus 128 ~V~lDP-~g---~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 128 YVDLDP-FG---TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECC-SS---CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECC-Cc---CHHHHHHHHHHHhCCCCEEEEEe
Confidence 999996 33 23469999999999999887744
No 248
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.94 E-value=5.8e-09 Score=109.03 Aligned_cols=98 Identities=23% Similarity=0.313 Sum_probs=78.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||+|||+ |.-++.+|+ .+.+|+|||+|+++++.|+++++..| +. ++|+++|+.+++.. .||+|++
T Consensus 289 ~~~~~VLDlgcG~-G~~sl~la~---~~~~V~gvD~s~~ai~~A~~n~~~ng-l~--v~~~~~d~~~~~~~--~fD~Vv~ 359 (425)
T 2jjq_A 289 VEGEKILDMYSGV-GTFGIYLAK---RGFNVKGFDSNEFAIEMARRNVEINN-VD--AEFEVASDREVSVK--GFDTVIV 359 (425)
T ss_dssp CCSSEEEEETCTT-THHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHHT-CC--EEEEECCTTTCCCT--TCSEEEE
T ss_pred CCCCEEEEeeccc-hHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHcC-Cc--EEEEECChHHcCcc--CCCEEEE
Confidence 6789999999996 566677888 36799999999999999999999888 53 99999999876543 7999999
Q ss_pred cccc-CChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALA-GNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALV-gm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+--- |+ ...+++.+. .++|||++++-.
T Consensus 360 dPPr~g~---~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 360 DPPRAGL---HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CCCTTCS---CHHHHHHHH-HHCCSEEEEEES
T ss_pred cCCccch---HHHHHHHHH-hcCCCcEEEEEC
Confidence 7442 22 235666665 489999888853
No 249
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.94 E-value=3.6e-09 Score=104.85 Aligned_cols=80 Identities=13% Similarity=0.138 Sum_probs=60.9
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcc
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
.+.+.++++|||||||++ .-+..+++ .+.+|+|||+|+.+++.|++.+...| + .+++|+++|+.+++ ...||
T Consensus 37 ~~~~~~~~~VLDiG~G~G-~lt~~La~---~~~~v~~vDi~~~~~~~a~~~~~~~~-~-~~v~~~~~D~~~~~--~~~~D 108 (299)
T 2h1r_A 37 AAKIKSSDIVLEIGCGTG-NLTVKLLP---LAKKVITIDIDSRMISEVKKRCLYEG-Y-NNLEVYEGDAIKTV--FPKFD 108 (299)
T ss_dssp HHCCCTTCEEEEECCTTS-TTHHHHTT---TSSEEEEECSCHHHHHHHHHHHHHTT-C-CCEEC----CCSSC--CCCCS
T ss_pred hcCCCCcCEEEEEcCcCc-HHHHHHHh---cCCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEEECchhhCC--cccCC
Confidence 345578899999999975 45566777 36899999999999999999998877 4 68999999998754 35799
Q ss_pred eEEecccc
Q 041205 206 CIILAALA 213 (535)
Q Consensus 206 vVfiaALV 213 (535)
+|+.+...
T Consensus 109 ~Vv~n~py 116 (299)
T 2h1r_A 109 VCTANIPY 116 (299)
T ss_dssp EEEEECCG
T ss_pred EEEEcCCc
Confidence 99986443
No 250
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.93 E-value=3.6e-09 Score=106.09 Aligned_cols=133 Identities=17% Similarity=0.183 Sum_probs=86.6
Q ss_pred CCCCCCEEEEEccCC----ChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEE-EEccccccccCCC
Q 041205 128 GVAQLKKVAFVGSGP----MPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKF-LTCDIMEVKEKLG 202 (535)
Q Consensus 128 ~l~~pkRVLeIGSGp----lPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~F-i~GDA~el~~dL~ 202 (535)
.+.++++|||||||. +|.+ ..+++...++++|+|||+++. + .+++| +++|+.+.+.. +
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~--------v-------~~v~~~i~gD~~~~~~~-~ 122 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF--------V-------SDADSTLIGDCATVHTA-N 122 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC--------B-------CSSSEEEESCGGGCCCS-S
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC--------C-------CCCEEEEECccccCCcc-C
Confidence 567899999999943 3334 555663334799999999998 1 25788 99999876543 5
Q ss_pred CcceEEeccccCC-----------hhhHHHHHHHHHhhcccCeEEEEEcccccccccCCCCcc--ccCCcEEEEEEcCCC
Q 041205 203 EYDCIILAALAGN-----------EEEKAKILGHIRKYMKEGGVLLVRSAKGARAFLYPVVEH--ELFDFKVLSIFHPTN 269 (535)
Q Consensus 203 ~FDvVfiaALVgm-----------~edK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~Vdp--dl~GFeil~v~hP~~ 269 (535)
.||+|+.+..... ......+++++.++|||||.|++....+-. +..+.. ...||..+...++..
T Consensus 123 ~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~---~~~l~~~l~~~GF~~v~~~asr~ 199 (290)
T 2xyq_A 123 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW---NADLYKLMGHFSWWTAFVTNVNA 199 (290)
T ss_dssp CEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC---CHHHHHHHTTEEEEEEEEEGGGT
T ss_pred cccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC---HHHHHHHHHHcCCcEEEEEEcCC
Confidence 6999998532110 123458999999999999999986543210 111111 224787665555444
Q ss_pred cceeeeEEEec
Q 041205 270 DVINSVVLLQL 280 (535)
Q Consensus 270 eVINSVVvARK 280 (535)
+-...+++.+.
T Consensus 200 ~s~e~~lv~~~ 210 (290)
T 2xyq_A 200 SSSEAFLIGAN 210 (290)
T ss_dssp TSSCEEEEEEE
T ss_pred CchheEEecCC
Confidence 33455676664
No 251
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.92 E-value=3.8e-09 Score=106.61 Aligned_cols=110 Identities=15% Similarity=0.262 Sum_probs=86.9
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc--CCc-CCCeEEEEccccccccCC-CCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD--DEI-EKRMKFLTCDIMEVKEKL-GEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l--G~L-s~rI~Fi~GDA~el~~dL-~~FD 205 (535)
..|++||-||.| .|.++..+.+ |.+..+|+.||||++.++.|++.+... |.+ ..|++++.+|+.+..... +.||
T Consensus 82 p~pk~VLIiGgG-dG~~~revlk-~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 82 GHAKHVLIIGGG-DGAMLREVTR-HKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp SCCCEEEEESCT-TSHHHHHHHT-CTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred CCCCeEEEECCC-chHHHHHHHH-cCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCC
Confidence 678999999999 5677777767 567789999999999999999987542 212 369999999998876544 3599
Q ss_pred eEEeccccCC-hh---hHHHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAGN-EE---EKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVgm-~e---dK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|++|+.-.. .. --.++++.+++.|+|||++++..+
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 9999965421 11 236799999999999999999754
No 252
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.88 E-value=4.6e-10 Score=110.23 Aligned_cols=104 Identities=16% Similarity=0.156 Sum_probs=71.4
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHH-hhcCCcCCCeEEE--EccccccccCCCCcc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIV-SSDDEIEKRMKFL--TCDIMEVKEKLGEYD 205 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li-~~lG~Ls~rI~Fi--~GDA~el~~dL~~FD 205 (535)
+.++++||||||||+++| .++|++ ++|+|||+++ ++..+++.. .... .+.++.|+ ++|+.+++ ...||
T Consensus 72 ~~~g~~VLDlGcGtG~~s-~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~-~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWS-YYAASR----PHVMDVRAYT-LGVGGHEVPRITES-YGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp CCCCEEEEEESCTTSHHH-HHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCB-TTGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCEEEEeCcCCCHHH-HHHHHc----CcEEEEECch-hhhhhhhhhhhhhc-cCCCeEEEecccCHhHCC--CCCCc
Confidence 467899999999997766 667772 7899999999 432222110 0011 11278999 99998765 35799
Q ss_pred eEEeccc--cCC-hhhHH---HHHHHHHhhcccCe--EEEEEcc
Q 041205 206 CIILAAL--AGN-EEEKA---KILGHIRKYMKEGG--VLLVRSA 241 (535)
Q Consensus 206 vVfiaAL--Vgm-~edK~---~VL~eL~rvLKPGG--vLVvRsa 241 (535)
+|+.+.. .+. ..+.. .+|..+.++|+||| .+++...
T Consensus 143 ~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 143 VIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred EEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 9998744 112 11112 48999999999999 9998543
No 253
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.86 E-value=2.6e-09 Score=107.41 Aligned_cols=97 Identities=11% Similarity=0.066 Sum_probs=67.4
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeE-EEEcccccccc---CCCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMK-FLTCDIMEVKE---KLGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~-Fi~GDA~el~~---dL~~FD 205 (535)
.++++|||||||++++| .+++++ ...+|+|||++++|++.+.+.-. ++. +...|+..+.. +...||
T Consensus 84 ~~g~~vLDiGcGTG~~t-~~L~~~--ga~~V~aVDvs~~mL~~a~r~~~-------rv~~~~~~ni~~l~~~~l~~~~fD 153 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFT-DVMLQN--GAKLVYAVDVGTNQLVWKLRQDD-------RVRSMEQYNFRYAEPVDFTEGLPS 153 (291)
T ss_dssp CTTCEEEEETCTTSHHH-HHHHHT--TCSEEEEECSSSSCSCHHHHTCT-------TEEEECSCCGGGCCGGGCTTCCCS
T ss_pred ccccEEEecCCCccHHH-HHHHhC--CCCEEEEEECCHHHHHHHHHhCc-------ccceecccCceecchhhCCCCCCC
Confidence 46789999999987777 456662 44699999999999998654211 222 22233332221 123499
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+|+++.... .-..+|.+++++|+|||.+++-
T Consensus 154 ~v~~d~sf~---sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 154 FASIDVSFI---SLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EEEECCSSS---CGGGTHHHHHHHSCTTCEEEEE
T ss_pred EEEEEeeHh---hHHHHHHHHHHHcCcCCEEEEE
Confidence 999875543 3488999999999999998885
No 254
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.85 E-value=1.4e-09 Score=107.55 Aligned_cols=103 Identities=13% Similarity=0.117 Sum_probs=71.2
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHH-hhcCCcCCCeEEE--EccccccccCCCCcc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIV-SSDDEIEKRMKFL--TCDIMEVKEKLGEYD 205 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li-~~lG~Ls~rI~Fi--~GDA~el~~dL~~FD 205 (535)
+.++++||||||||+++| .++|++ ++|+|||+++ ++..|++.. .... .+.++.|+ ++|+.+++ .+.||
T Consensus 80 ~~~g~~VLDlGcGtG~~s-~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~-~~~~v~~~~~~~D~~~l~--~~~fD 150 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWS-YYAASQ----PNVREVKAYT-LGTSGHEKPRLVET-FGWNLITFKSKVDVTKME--PFQAD 150 (276)
T ss_dssp CCCCEEEEEESCTTCHHH-HHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCC-TTGGGEEEECSCCGGGCC--CCCCS
T ss_pred CCCCCEEEEeccCCCHHH-HHHHHc----CCEEEEECch-hhhhhhhchhhhhh-cCCCeEEEeccCcHhhCC--CCCcC
Confidence 467899999999997765 667772 6899999999 533332211 1111 12378999 99998765 35799
Q ss_pred eEEecccc--CC-hhhHH---HHHHHHHhhcccCe--EEEEEc
Q 041205 206 CIILAALA--GN-EEEKA---KILGHIRKYMKEGG--VLLVRS 240 (535)
Q Consensus 206 vVfiaALV--gm-~edK~---~VL~eL~rvLKPGG--vLVvRs 240 (535)
+|+.+... +. ..+.. .+|..+.++|+||| .+++..
T Consensus 151 ~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 151 TVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 99987441 11 11111 48999999999999 998854
No 255
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.84 E-value=1.3e-08 Score=101.70 Aligned_cols=109 Identities=18% Similarity=0.199 Sum_probs=82.4
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCC----CcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMK----STHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~----Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
.++.+|||+|||+++++. .++++... +.+|+|+|+|+.+++.|+.++...| + ++.++++|+.+.. ....||
T Consensus 129 ~~~~~VlDp~cGsG~~l~-~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-~--~~~i~~~D~l~~~-~~~~fD 203 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLT-TVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-Q--KMTLLHQDGLANL-LVDPVD 203 (344)
T ss_dssp CSEEEEEETTCTTSHHHH-HHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-C--CCEEEESCTTSCC-CCCCEE
T ss_pred CCCCEEEeCCCCccHHHH-HHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-C--CceEEECCCCCcc-ccCCcc
Confidence 467899999999866654 44452221 2799999999999999999998888 4 6899999986532 335799
Q ss_pred eEEeccccCC--hhh----------------HHHHHHHHHhhcccCeEEEEEcccc
Q 041205 206 CIILAALAGN--EEE----------------KAKILGHIRKYMKEGGVLLVRSAKG 243 (535)
Q Consensus 206 vVfiaALVgm--~ed----------------K~~VL~eL~rvLKPGGvLVvRsa~G 243 (535)
+|+..--.|. ..+ ...++.++.+.|+|||++++-.+++
T Consensus 204 ~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 204 VVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred EEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 9998744332 111 1368999999999999998877655
No 256
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.83 E-value=5.2e-09 Score=104.65 Aligned_cols=97 Identities=13% Similarity=0.211 Sum_probs=76.0
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||||||+ |..+..+++ .+|+.+++++|+ +.+++.|++ . .+|+|+.+|..+ +. ..||+|++
T Consensus 192 ~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~----~----~~v~~~~~d~~~-~~--~~~D~v~~ 257 (358)
T 1zg3_A 192 EGLESLVDVGGGT-GGVTKLIHE-IFPHLKCTVFDQ-PQVVGNLTG----N----ENLNFVGGDMFK-SI--PSADAVLL 257 (358)
T ss_dssp HTCSEEEEETCTT-SHHHHHHHH-HCTTSEEEEEEC-HHHHSSCCC----C----SSEEEEECCTTT-CC--CCCSEEEE
T ss_pred cCCCEEEEECCCc-CHHHHHHHH-HCCCCeEEEecc-HHHHhhccc----C----CCcEEEeCccCC-CC--CCceEEEE
Confidence 4678999999996 666667777 468899999999 788876653 1 359999999876 33 35999998
Q ss_pred ccccCChhh--HHHHHHHHHhhccc---CeEEEEEc
Q 041205 210 AALAGNEEE--KAKILGHIRKYMKE---GGVLLVRS 240 (535)
Q Consensus 210 aALVgm~ed--K~~VL~eL~rvLKP---GGvLVvRs 240 (535)
....+..++ ..++|+++++.|+| ||+|++-+
T Consensus 258 ~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 258 KWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred cccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 766654344 44999999999999 99888854
No 257
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.82 E-value=2.9e-09 Score=106.50 Aligned_cols=103 Identities=12% Similarity=0.138 Sum_probs=72.3
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeC----ChhHHHHHHHHHhhcCCcCCCeEEEEc-cccccccCCCC
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDI----DETANNLARRIVSSDDEIEKRMKFLTC-DIMEVKEKLGE 203 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDI----DpeAIelAR~li~~lG~Ls~rI~Fi~G-DA~el~~dL~~ 203 (535)
+.++++||||||||+++| .++|++ ++|+|||+ ++.+++.+ ..+..| . .+++|+++ |+.+++ ...
T Consensus 80 ~~~g~~VLDlGcG~G~~s-~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~-~-~~v~~~~~~D~~~l~--~~~ 148 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWS-YYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYG-W-NLVRLQSGVDVFFIP--PER 148 (305)
T ss_dssp SCCCEEEEEETCTTSHHH-HHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTT-G-GGEEEECSCCTTTSC--CCC
T ss_pred CCCCCEEEEEcCCCCHHH-HHHHhc----CCEEEEeccccCchhHHHHH--HhhhcC-C-CCeEEEeccccccCC--cCC
Confidence 467899999999997776 567772 58999999 55443211 122333 1 57999999 987654 357
Q ss_pred cceEEecccc--CC-hhhHH---HHHHHHHhhcccCeEEEEEccc
Q 041205 204 YDCIILAALA--GN-EEEKA---KILGHIRKYMKEGGVLLVRSAK 242 (535)
Q Consensus 204 FDvVfiaALV--gm-~edK~---~VL~eL~rvLKPGGvLVvRsa~ 242 (535)
||+|+.+... +. ..+.. .+|..+.++|||||.|++....
T Consensus 149 fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 149 CDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred CCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 9999987543 22 22332 5889999999999999986543
No 258
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.79 E-value=5.2e-08 Score=100.90 Aligned_cols=118 Identities=14% Similarity=0.119 Sum_probs=85.7
Q ss_pred HHHHHhhCCCCCCEEEEEccCCChhhHHHHHh---hcCCC----------------------------------cEEEEE
Q 041205 121 GALIENTGVAQLKKVAFVGSGPMPLTSIILAS---QHMKS----------------------------------THFDNI 163 (535)
Q Consensus 121 ~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk---~~l~G----------------------------------a~VtGI 163 (535)
..+....+..++.+|+|.|||++.+ +|-.|. ...|| .+|+|+
T Consensus 191 a~ll~l~~~~~~~~vlDp~CGSGt~-~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~Gv 269 (393)
T 3k0b_A 191 AALVLLTSWHPDRPFYDPVCGSGTI-PIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGG 269 (393)
T ss_dssp HHHHHHSCCCTTSCEEETTCTTSHH-HHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred HHHHHHhCCCCCCeEEEcCCCCCHH-HHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEE
Confidence 3344445667889999999997544 344433 11222 579999
Q ss_pred eCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEeccccCC-h---hhHHHHHHHHHhhccc--CeEEE
Q 041205 164 DIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAALAGN-E---EEKAKILGHIRKYMKE--GGVLL 237 (535)
Q Consensus 164 DIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaALVgm-~---edK~~VL~eL~rvLKP--GGvLV 237 (535)
|+|+.+++.|+++++..| +.++|+|+++|+.+++.+ ..||+|+++--.|. . ++-..++..+.+.+++ ||.+.
T Consensus 270 Did~~al~~Ar~Na~~~g-l~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 347 (393)
T 3k0b_A 270 DIDARLIEIAKQNAVEAG-LGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVY 347 (393)
T ss_dssp ESCHHHHHHHHHHHHHTT-CTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEE
T ss_pred ECCHHHHHHHHHHHHHcC-CCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEE
Confidence 999999999999999999 778899999999887654 47999999855443 2 3445567777777766 77666
Q ss_pred EEcc
Q 041205 238 VRSA 241 (535)
Q Consensus 238 vRsa 241 (535)
+-+.
T Consensus 348 iit~ 351 (393)
T 3k0b_A 348 VLTS 351 (393)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6554
No 259
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.78 E-value=2.8e-09 Score=104.31 Aligned_cols=88 Identities=16% Similarity=0.078 Sum_probs=69.8
Q ss_pred HHHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCCh-------hHHHHHHHHHhhcCCcCCCeEEEE
Q 041205 119 EYGALIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDE-------TANNLARRIVSSDDEIEKRMKFLT 191 (535)
Q Consensus 119 E~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDp-------eAIelAR~li~~lG~Ls~rI~Fi~ 191 (535)
+...+...+...++.+|||+|||. |.-++.+|+ .|++|+++|+|+ ++++.|+++++..| +.++|+|++
T Consensus 71 ~~~~l~~a~~~~~~~~VLDlgcG~-G~~a~~lA~---~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~-~~~ri~~~~ 145 (258)
T 2r6z_A 71 GGELIAKAVNHTAHPTVWDATAGL-GRDSFVLAS---LGLTVTAFEQHPAVACLLSDGIRRALLNPETQD-TAARINLHF 145 (258)
T ss_dssp --CHHHHHTTGGGCCCEEETTCTT-CHHHHHHHH---TTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHH-HHTTEEEEE
T ss_pred chHHHHHHhCcCCcCeEEEeeCcc-CHHHHHHHH---hCCEEEEEECChhhhHHHHHHHHHHHhHHHhhC-CccCeEEEE
Confidence 444555544556779999999995 777788988 378999999999 99999999988888 667899999
Q ss_pred ccccccccCC----CCcceEEecc
Q 041205 192 CDIMEVKEKL----GEYDCIILAA 211 (535)
Q Consensus 192 GDA~el~~dL----~~FDvVfiaA 211 (535)
+|+.+....+ +.||+|+++.
T Consensus 146 ~d~~~~l~~~~~~~~~fD~V~~dP 169 (258)
T 2r6z_A 146 GNAAEQMPALVKTQGKPDIVYLDP 169 (258)
T ss_dssp SCHHHHHHHHHHHHCCCSEEEECC
T ss_pred CCHHHHHHhhhccCCCccEEEECC
Confidence 9998754322 5799999974
No 260
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.77 E-value=5.1e-08 Score=97.75 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=62.9
Q ss_pred HHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCC
Q 041205 124 IENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGE 203 (535)
Q Consensus 124 ~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~ 203 (535)
...+.+.++++|||||||++. -+..+++ .+.+|++||+|+++++.+++.+... .+++|+++|+.++..+...
T Consensus 43 v~~l~~~~~~~VLEIG~G~G~-lT~~La~---~~~~V~aVEid~~li~~a~~~~~~~----~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 43 VESANLTKDDVVLEIGLGKGI-LTEELAK---NAKKVYVIEIDKSLEPYANKLKELY----NNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHTTCCTTCEEEEECCTTSH-HHHHHHH---HSSEEEEEESCGGGHHHHHHHHHHC----SSEEEEESCTTTSCGGGSC
T ss_pred HHhcCCCCcCEEEEECCCchH-HHHHHHh---cCCEEEEEECCHHHHHHHHHHhccC----CCeEEEECchhhCCcccCC
Confidence 334456788999999999754 4556666 2689999999999999999998732 4799999999876655456
Q ss_pred cceEEec
Q 041205 204 YDCIILA 210 (535)
Q Consensus 204 FDvVfia 210 (535)
||+|+..
T Consensus 115 fD~Iv~N 121 (295)
T 3gru_A 115 FNKVVAN 121 (295)
T ss_dssp CSEEEEE
T ss_pred ccEEEEe
Confidence 9999965
No 261
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.74 E-value=1e-08 Score=107.61 Aligned_cols=75 Identities=23% Similarity=0.146 Sum_probs=64.3
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc--CCcCCCeEEEEccccccccC--CCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD--DEIEKRMKFLTCDIMEVKEK--LGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l--G~Ls~rI~Fi~GDA~el~~d--L~~FD 205 (535)
.++.+|||+||| .|.-++.+|+ .+.+|++||+|+++++.|+++++.. | + ++|+|+++|+.+.... .+.||
T Consensus 92 ~~g~~VLDLgcG-~G~~al~LA~---~g~~V~~VD~s~~~l~~Ar~N~~~~~~g-l-~~i~~i~~Da~~~L~~~~~~~fD 165 (410)
T 3ll7_A 92 REGTKVVDLTGG-LGIDFIALMS---KASQGIYIERNDETAVAARHNIPLLLNE-G-KDVNILTGDFKEYLPLIKTFHPD 165 (410)
T ss_dssp CTTCEEEESSCS-SSHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHSCT-T-CEEEEEESCGGGSHHHHHHHCCS
T ss_pred CCCCEEEEeCCC-chHHHHHHHh---cCCEEEEEECCHHHHHHHHHhHHHhccC-C-CcEEEEECcHHHhhhhccCCCce
Confidence 358999999999 5777788988 4789999999999999999999998 8 5 7899999999875332 24799
Q ss_pred eEEec
Q 041205 206 CIILA 210 (535)
Q Consensus 206 vVfia 210 (535)
+||++
T Consensus 166 vV~lD 170 (410)
T 3ll7_A 166 YIYVD 170 (410)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99997
No 262
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.73 E-value=1.2e-07 Score=98.09 Aligned_cols=118 Identities=13% Similarity=0.098 Sum_probs=87.4
Q ss_pred HHHHHhhCCCCCCEEEEEccCCChhhHHHHHh---hcCCC----------------------------------cEEEEE
Q 041205 121 GALIENTGVAQLKKVAFVGSGPMPLTSIILAS---QHMKS----------------------------------THFDNI 163 (535)
Q Consensus 121 ~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk---~~l~G----------------------------------a~VtGI 163 (535)
..+....+..++..|+|.|||++.+ +|-.|. ...|| .+|+|+
T Consensus 184 aall~l~~~~~~~~llDp~CGSGt~-lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~Gv 262 (384)
T 3ldg_A 184 AAIILLSNWFPDKPFVDPTCGSGTF-CIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGF 262 (384)
T ss_dssp HHHHHHTTCCTTSCEEETTCTTSHH-HHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred HHHHHHhCCCCCCeEEEeCCcCCHH-HHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEE
Confidence 3344445667889999999997544 343333 11222 579999
Q ss_pred eCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEeccccCC----hhhHHHHHHHHHhhccc--CeEEE
Q 041205 164 DIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAALAGN----EEEKAKILGHIRKYMKE--GGVLL 237 (535)
Q Consensus 164 DIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaALVgm----~edK~~VL~eL~rvLKP--GGvLV 237 (535)
|+|+.|++.|+++++..| +.++|+|+++|+.+++.. ..||+|+++--.|. .++...++..+.+.|++ |+.+.
T Consensus 263 Did~~al~~Ar~Na~~~g-l~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 340 (384)
T 3ldg_A 263 DFDGRMVEIARKNAREVG-LEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQF 340 (384)
T ss_dssp ESCHHHHHHHHHHHHHTT-CTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEE
T ss_pred ECCHHHHHHHHHHHHHcC-CCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 999999999999999999 788899999999887654 47999999744432 35667788888888777 77666
Q ss_pred EEcc
Q 041205 238 VRSA 241 (535)
Q Consensus 238 vRsa 241 (535)
+-++
T Consensus 341 iit~ 344 (384)
T 3ldg_A 341 ILTN 344 (384)
T ss_dssp EEES
T ss_pred EEEC
Confidence 6554
No 263
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.72 E-value=8.1e-08 Score=98.99 Aligned_cols=117 Identities=16% Similarity=0.156 Sum_probs=86.2
Q ss_pred HHHHhhCCCCCCEEEEEccCCChhhHHHHHhhc---CC----------------------------------CcEEEEEe
Q 041205 122 ALIENTGVAQLKKVAFVGSGPMPLTSIILASQH---MK----------------------------------STHFDNID 164 (535)
Q Consensus 122 lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~---l~----------------------------------Ga~VtGID 164 (535)
.+....+..++.+|||.|||++.+ ++-.|... .| ..+|+|+|
T Consensus 186 ~ll~~~~~~~~~~vlDp~CGSGt~-lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvD 264 (385)
T 3ldu_A 186 GLIYLTPWKAGRVLVDPMCGSGTI-LIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYD 264 (385)
T ss_dssp HHHHTSCCCTTSCEEETTCTTCHH-HHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEE
T ss_pred HHHHhhCCCCCCeEEEcCCCCCHH-HHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEE
Confidence 334445567889999999997543 44444421 12 26899999
Q ss_pred CChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEeccccCC----hhhHHHHHHHHHhhccc--CeEEEE
Q 041205 165 IDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAALAGN----EEEKAKILGHIRKYMKE--GGVLLV 238 (535)
Q Consensus 165 IDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaALVgm----~edK~~VL~eL~rvLKP--GGvLVv 238 (535)
+|+.+++.|++++...| +.++|+|+++|+.+++.+ ..||+|+++--.|. .++...++..+.+.|++ |+.+.+
T Consensus 265 id~~ai~~Ar~Na~~~g-l~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 342 (385)
T 3ldu_A 265 IDEESIDIARENAEIAG-VDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYL 342 (385)
T ss_dssp SCHHHHHHHHHHHHHHT-CGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEE
T ss_pred CCHHHHHHHHHHHHHcC-CCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 99999999999999999 777899999999887654 47999999755553 24456677777777776 766655
Q ss_pred Ecc
Q 041205 239 RSA 241 (535)
Q Consensus 239 Rsa 241 (535)
-++
T Consensus 343 it~ 345 (385)
T 3ldu_A 343 ITS 345 (385)
T ss_dssp EES
T ss_pred EEC
Confidence 443
No 264
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.72 E-value=2.9e-08 Score=99.72 Aligned_cols=81 Identities=12% Similarity=0.087 Sum_probs=65.2
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC-----CC
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK-----LG 202 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d-----L~ 202 (535)
.+.++.+|||+|||+++.| +.++++ .++++|+|||+|+++++.|+++++..| .+++|+++|..+++.. ..
T Consensus 23 ~~~~g~~vLD~g~G~G~~s-~~la~~-~~~~~VigvD~d~~al~~A~~~~~~~g---~~v~~v~~d~~~l~~~l~~~g~~ 97 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHS-RAILEH-CPGCRIIGIDVDSEVLRIAEEKLKEFS---DRVSLFKVSYREADFLLKTLGIE 97 (301)
T ss_dssp CCCTTCEEEETTCTTSHHH-HHHHHH-CTTCEEEEEESCHHHHHHHHHHTGGGT---TTEEEEECCGGGHHHHHHHTTCS
T ss_pred CCCCCCEEEEEeCCcCHHH-HHHHHH-CCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCHHHHHHHHHhcCCC
Confidence 4467899999999976666 556663 568999999999999999999998877 5899999998876421 14
Q ss_pred CcceEEecccc
Q 041205 203 EYDCIILAALA 213 (535)
Q Consensus 203 ~FDvVfiaALV 213 (535)
.||.|+++..+
T Consensus 98 ~~D~Vl~D~gv 108 (301)
T 1m6y_A 98 KVDGILMDLGV 108 (301)
T ss_dssp CEEEEEEECSC
T ss_pred CCCEEEEcCcc
Confidence 69999987555
No 265
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.71 E-value=3e-08 Score=100.04 Aligned_cols=101 Identities=18% Similarity=0.182 Sum_probs=73.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++.+|||+|||++++ ++.++++..++.+|+|+|+|+.+++.| .+++++++|..+... .+.||+|+.
T Consensus 38 ~~~~~vLD~gcGtG~~-~~~~~~~~~~~~~i~gvDi~~~~~~~a-----------~~~~~~~~D~~~~~~-~~~fD~Ii~ 104 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPF-LRAFREAHGTAYRFVGVEIDPKALDLP-----------PWAEGILADFLLWEP-GEAFDLILG 104 (421)
T ss_dssp CTTCEEEEETCTTCHH-HHHHHHHHCSCSEEEEEESCTTTCCCC-----------TTEEEEESCGGGCCC-SSCEEEEEE
T ss_pred CCCCEEEECCCCChHH-HHHHHHHhCCCCeEEEEECCHHHHHhC-----------CCCcEEeCChhhcCc-cCCCCEEEE
Confidence 4577999999997544 466666433678999999999998766 368999999976543 257999998
Q ss_pred ccccC-----------C-hhh-----------------HHHHHHHHHhhcccCeEEEEEcccc
Q 041205 210 AALAG-----------N-EEE-----------------KAKILGHIRKYMKEGGVLLVRSAKG 243 (535)
Q Consensus 210 aALVg-----------m-~ed-----------------K~~VL~eL~rvLKPGGvLVvRsa~G 243 (535)
.--.+ + .+. ...+++++.+.|+|||++++-.+.+
T Consensus 105 NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 105 NPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp CCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred CcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 31110 1 111 2267999999999999988876543
No 266
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.64 E-value=2.4e-07 Score=88.99 Aligned_cols=70 Identities=17% Similarity=0.292 Sum_probs=55.0
Q ss_pred HHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC
Q 041205 123 LIENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK 200 (535)
Q Consensus 123 L~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d 200 (535)
+...+++.++.+|||||||++.+ +..++++ +.+|+|||+|+++++.+++.+... .+++++++|+.+++..
T Consensus 22 i~~~~~~~~~~~VLDiG~G~G~l-t~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~----~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 22 IMTNIRLNEHDNIFEIGSGKGHF-TLELVQR---CNFVTAIEIDHKLCKTTENKLVDH----DNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHTTCCCCTTCEEEEECCTTSHH-HHHHHHH---SSEEEEECSCHHHHHHHHHHTTTC----CSEEEECCCGGGCCCC
T ss_pred HHHhCCCCCCCEEEEEeCCchHH-HHHHHHc---CCeEEEEECCHHHHHHHHHhhccC----CCeEEEEChHHhCCcc
Confidence 33344557889999999997554 4566662 489999999999999999987642 4799999999887654
No 267
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.62 E-value=2e-09 Score=102.65 Aligned_cols=75 Identities=23% Similarity=0.284 Sum_probs=57.0
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC-CCc
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL-GEY 204 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL-~~F 204 (535)
.+.+.++.+|||||||++.+| ..++++ +++|+|||+|+++++.|++.+. + ..+++|+++|+.+++... +.|
T Consensus 24 ~~~~~~~~~VLDiG~G~G~~~-~~l~~~---~~~v~~id~~~~~~~~a~~~~~--~--~~~v~~~~~D~~~~~~~~~~~f 95 (245)
T 1yub_A 24 QLNLKETDTVYEIGTGKGHLT-TKLAKI---SKQVTSIELDSHLFNLSSEKLK--L--NTRVTLIHQDILQFQFPNKQRY 95 (245)
T ss_dssp HCCCCSSEEEEECSCCCSSCS-HHHHHH---SSEEEESSSSCSSSSSSSCTTT--T--CSEEEECCSCCTTTTCCCSSEE
T ss_pred hcCCCCCCEEEEEeCCCCHHH-HHHHHh---CCeEEEEECCHHHHHHHHHHhc--c--CCceEEEECChhhcCcccCCCc
Confidence 345578899999999976555 566662 4899999999999999988775 2 258999999998876543 457
Q ss_pred ceEEe
Q 041205 205 DCIIL 209 (535)
Q Consensus 205 DvVfi 209 (535)
.|+.
T Consensus 96 -~vv~ 99 (245)
T 1yub_A 96 -KIVG 99 (245)
T ss_dssp -EEEE
T ss_pred -EEEE
Confidence 4443
No 268
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.60 E-value=2e-08 Score=99.03 Aligned_cols=110 Identities=10% Similarity=0.151 Sum_probs=75.9
Q ss_pred HHHHHHhhCCCCC--CEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcC------C-cCCCeEEE
Q 041205 120 YGALIENTGVAQL--KKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDD------E-IEKRMKFL 190 (535)
Q Consensus 120 ~~lL~~~~~l~~p--kRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG------~-Ls~rI~Fi 190 (535)
.+.+...+++.++ .+|||+||| .|.-++++|.+ |++|++||+++.+++++++.+++++ . +..+|+|+
T Consensus 75 ~e~l~~al~l~~g~~~~VLDl~~G-~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 75 GEAVAKAVGIKGDYLPDVVDATAG-LGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI 150 (258)
T ss_dssp GSHHHHHTTCBTTBCCCEEETTCT-TCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE
T ss_pred HHHHHHHhcccCCCCCEEEEcCCc-CCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE
Confidence 3555555666777 999999999 68888999983 7899999999999888888776442 0 12579999
Q ss_pred EccccccccCC-CCcceEEeccccCChhhHHHHHHHHHhhcccCe
Q 041205 191 TCDIMEVKEKL-GEYDCIILAALAGNEEEKAKILGHIRKYMKEGG 234 (535)
Q Consensus 191 ~GDA~el~~dL-~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGG 234 (535)
++|+.+++... +.||+||++-.... ..+...+....+.+++.+
T Consensus 151 ~~D~~~~L~~~~~~fDvV~lDP~y~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 151 HASSLTALTDITPRPQVVYLDPMFPH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp ESCHHHHSTTCSSCCSEEEECCCCCC-CCC-----HHHHHHHHHS
T ss_pred ECCHHHHHHhCcccCCEEEEcCCCCC-cccchHHHHHHHHHHHhh
Confidence 99998865433 35999999865532 223344444445555533
No 269
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.59 E-value=5.9e-08 Score=100.89 Aligned_cols=115 Identities=16% Similarity=0.130 Sum_probs=83.7
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhc------------CCCcEEEEEeCChhHHHHHHHHHhhcCCcCC-CeEEEEc
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQH------------MKSTHFDNIDIDETANNLARRIVSSDDEIEK-RMKFLTC 192 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~------------l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~-rI~Fi~G 192 (535)
.+...++.+|+|.|||++++. +.++++. ..+.+|+|+|+|+.++++|+.++...| +.. ++.+++|
T Consensus 166 ~l~~~~~~~VlDpacGsG~fl-~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g-~~~~~~~i~~g 243 (445)
T 2okc_A 166 CINPQMGETVCDPACGTGGFL-LTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG-IGTDRSPIVCE 243 (445)
T ss_dssp HHCCCTTCCEEETTCTTCHHH-HHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT-CCSSCCSEEEC
T ss_pred HhCCCCCCEEeccCCCcchHH-HHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC-CCcCCCCEeeC
Confidence 334466789999999987765 4444421 135789999999999999999988777 542 6889999
Q ss_pred cccccccCCCCcceEEeccccCC--hhh---------------HHHHHHHHHhhcccCeEEEEEcccc
Q 041205 193 DIMEVKEKLGEYDCIILAALAGN--EEE---------------KAKILGHIRKYMKEGGVLLVRSAKG 243 (535)
Q Consensus 193 DA~el~~dL~~FDvVfiaALVgm--~ed---------------K~~VL~eL~rvLKPGGvLVvRsa~G 243 (535)
|....+.. ..||+|+..--.+. ..+ ...++.++.+.|+|||++++-.++|
T Consensus 244 D~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 244 DSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp CTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 98764432 37999997633321 111 1478999999999999998876654
No 270
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.59 E-value=1.3e-07 Score=98.73 Aligned_cols=108 Identities=19% Similarity=0.150 Sum_probs=81.1
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcC-----C-cCCCeEEEEcccccccc----
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDD-----E-IEKRMKFLTCDIMEVKE---- 199 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG-----~-Ls~rI~Fi~GDA~el~~---- 199 (535)
.++++||-||.| .|.++..+.+ | +..+|+.||||++.++.|++.+.... + -..+++++.+|+.+...
T Consensus 204 ~~pkrVLIIGgG-dG~~~revlk-h-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~ 280 (381)
T 3c6k_A 204 YTGKDVLILGGG-DGGILCEIVK-L-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 280 (381)
T ss_dssp CTTCEEEEEECT-TCHHHHHHHT-T-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEECCC-cHHHHHHHHh-c-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhh
Confidence 568999999999 5667666666 3 45899999999999999999865321 0 12579999999987653
Q ss_pred CCCCcceEEecccc--------CC--hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 KLGEYDCIILAALA--------GN--EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 dL~~FDvVfiaALV--------gm--~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..+.||+|++|..- +. ..-..++++.+++.|+|||++++..
T Consensus 281 ~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 281 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 23469999998532 11 1224678999999999999999864
No 271
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.59 E-value=1.4e-07 Score=92.34 Aligned_cols=74 Identities=9% Similarity=0.151 Sum_probs=57.6
Q ss_pred HHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC--
Q 041205 124 IENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL-- 201 (535)
Q Consensus 124 ~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL-- 201 (535)
...+.+.++++|||||||++. -+..+++ .+++|++||+|+++++.+++.+.. . .++++++||+.+++.+.
T Consensus 22 v~~~~~~~~~~VLEIG~G~G~-lt~~La~---~~~~V~avEid~~~~~~~~~~~~~-~---~~v~~i~~D~~~~~~~~~~ 93 (255)
T 3tqs_A 22 VSAIHPQKTDTLVEIGPGRGA-LTDYLLT---ECDNLALVEIDRDLVAFLQKKYNQ-Q---KNITIYQNDALQFDFSSVK 93 (255)
T ss_dssp HHHHCCCTTCEEEEECCTTTT-THHHHTT---TSSEEEEEECCHHHHHHHHHHHTT-C---TTEEEEESCTTTCCGGGSC
T ss_pred HHhcCCCCcCEEEEEcccccH-HHHHHHH---hCCEEEEEECCHHHHHHHHHHHhh-C---CCcEEEEcchHhCCHHHhc
Confidence 334456789999999999754 4566666 358999999999999999998876 2 48999999998765421
Q ss_pred --CCcc
Q 041205 202 --GEYD 205 (535)
Q Consensus 202 --~~FD 205 (535)
+.||
T Consensus 94 ~~~~~~ 99 (255)
T 3tqs_A 94 TDKPLR 99 (255)
T ss_dssp CSSCEE
T ss_pred cCCCeE
Confidence 3477
No 272
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.51 E-value=5.8e-07 Score=89.04 Aligned_cols=76 Identities=16% Similarity=0.069 Sum_probs=58.7
Q ss_pred HhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC-CC
Q 041205 125 ENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL-GE 203 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL-~~ 203 (535)
..+.+.++ +|||||||++.+| ..+++ .+++|++||+|+++++.+++.+. + .++++++||+.++..+. ..
T Consensus 41 ~~~~~~~~-~VLEIG~G~G~lt-~~L~~---~~~~V~avEid~~~~~~l~~~~~--~---~~v~vi~~D~l~~~~~~~~~ 110 (271)
T 3fut_A 41 EAARPFTG-PVFEVGPGLGALT-RALLE---AGAEVTAIEKDLRLRPVLEETLS--G---LPVRLVFQDALLYPWEEVPQ 110 (271)
T ss_dssp HHHCCCCS-CEEEECCTTSHHH-HHHHH---TTCCEEEEESCGGGHHHHHHHTT--T---SSEEEEESCGGGSCGGGSCT
T ss_pred HhcCCCCC-eEEEEeCchHHHH-HHHHH---cCCEEEEEECCHHHHHHHHHhcC--C---CCEEEEECChhhCChhhccC
Confidence 33455778 9999999976555 55666 35899999999999999999875 2 47999999998765542 35
Q ss_pred cceEEec
Q 041205 204 YDCIILA 210 (535)
Q Consensus 204 FDvVfia 210 (535)
||.|+..
T Consensus 111 ~~~iv~N 117 (271)
T 3fut_A 111 GSLLVAN 117 (271)
T ss_dssp TEEEEEE
T ss_pred ccEEEec
Confidence 7887754
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.40 E-value=9.2e-07 Score=97.52 Aligned_cols=103 Identities=17% Similarity=0.283 Sum_probs=77.8
Q ss_pred CCCEEEEEccCCChhhHHHHH--hhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 131 QLKKVAFVGSGPMPLTSIILA--SQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LA--k~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
.+..|++||||.+|++...+. ++.....+|.+||.++ +...|+++++..| ++++|+++.||+.++..+ ..+|+|+
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~-~~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEE-WGSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHT-TGGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhcc-CCCeEEEEeCcceeccCC-cccCEEE
Confidence 456899999999999644442 2112224789999997 5678999999999 899999999999886543 5699999
Q ss_pred eccccC---ChhhHHHHHHHHHhhcccCeEEE
Q 041205 209 LAALAG---NEEEKAKILGHIRKYMKEGGVLL 237 (535)
Q Consensus 209 iaALVg---m~edK~~VL~eL~rvLKPGGvLV 237 (535)
.. .+| .-|--..++....|.|||||+++
T Consensus 434 SE-wMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SE-LLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CC-CCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EE-cCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 65 222 13444578888899999999875
No 274
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.38 E-value=5.1e-07 Score=88.18 Aligned_cols=65 Identities=12% Similarity=0.120 Sum_probs=50.9
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~ 199 (535)
+.+.++++|||||||++.+|. +++ ....+|++||+|+++++.+++.+... .++++++||+.+++.
T Consensus 17 ~~~~~~~~VLEIG~G~G~lt~--l~~--~~~~~v~avEid~~~~~~a~~~~~~~----~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 17 INPQKGQAMVEIGPGLAALTE--PVG--ERLDQLTVIELDRDLAARLQTHPFLG----PKLTIYQQDAMTFNF 81 (252)
T ss_dssp HCCCTTCCEEEECCTTTTTHH--HHH--TTCSCEEEECCCHHHHHHHHTCTTTG----GGEEEECSCGGGCCH
T ss_pred cCCCCcCEEEEECCCCcHHHH--hhh--CCCCeEEEEECCHHHHHHHHHHhccC----CceEEEECchhhCCH
Confidence 455788999999999877777 554 22223999999999999999876542 379999999987543
No 275
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.36 E-value=9.2e-07 Score=91.24 Aligned_cols=112 Identities=14% Similarity=0.089 Sum_probs=86.9
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCC----cCCCeEEEEccccccccCC-
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDE----IEKRMKFLTCDIMEVKEKL- 201 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~----Ls~rI~Fi~GDA~el~~dL- 201 (535)
+...++++|||+-+||+|=|+.+ |. ...++.|+++|+|+.++...+++++++|. ...++.+.+.|+..+....
T Consensus 144 L~~~pg~~VLD~CAaPGGKT~~l-a~-~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~ 221 (359)
T 4fzv_A 144 LGLQPGDIVLDLCAAPGGKTLAL-LQ-TGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEG 221 (359)
T ss_dssp HCCCTTEEEEESSCTTCHHHHHH-HH-TTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHST
T ss_pred hCCCCCCEEEEecCCccHHHHHH-HH-hcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcc
Confidence 35689999999999999988654 45 35677899999999999999999998872 1257899999998765433
Q ss_pred CCcceEEecccc-----CC-h--h----------------hHHHHHHHHHhhcccCeEEEEEc
Q 041205 202 GEYDCIILAALA-----GN-E--E----------------EKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 202 ~~FDvVfiaALV-----gm-~--e----------------dK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+.||.|++|+-= |+ . + --.++|.+..+.+||||+||+-+
T Consensus 222 ~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 222 DTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp TCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 469999998541 11 0 0 01468899999999999999865
No 276
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.33 E-value=1.6e-06 Score=96.77 Aligned_cols=105 Identities=12% Similarity=0.193 Sum_probs=77.8
Q ss_pred CCCEEEEEccCCChhhHH--HHHhhcC---------CCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc
Q 041205 131 QLKKVAFVGSGPMPLTSI--ILASQHM---------KSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI--~LAk~~l---------~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~ 199 (535)
+++.||+||||++|++.. ..++..- ...+|++||.++.++...+.... .| ++++|+++.||+.++..
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng-~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT-WKRRVTIIESDMRSLPG 486 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT-TTTCSEEEESCGGGHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC-CCCeEEEEeCchhhccc
Confidence 356899999999999843 3332111 23599999999988866666554 57 78899999999998765
Q ss_pred C-----CCCcceEEeccccCC---hhhHHHHHHHHHhhcccCeEEEE
Q 041205 200 K-----LGEYDCIILAALAGN---EEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 200 d-----L~~FDvVfiaALVgm---~edK~~VL~eL~rvLKPGGvLVv 238 (535)
+ ....|+|+.. +.|. .+--.++|..+.+.|+|||+++=
T Consensus 487 p~~~~~~ekVDIIVSE-lmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSE-LLGSFGDNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp HHHHTTCCCCSEEEEC-CCBTTBGGGSHHHHHHTTGGGSCTTCEEES
T ss_pred ccccCCCCcccEEEEe-ccccccchhccHHHHHHHHHhCCCCcEEEC
Confidence 2 4579999976 3342 34456799999999999998753
No 277
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.32 E-value=2.1e-06 Score=95.09 Aligned_cols=119 Identities=22% Similarity=0.177 Sum_probs=83.1
Q ss_pred HHHHHhhCCCCCCEEEEEccCCChhhHHHHHhh---cC--------------------------------------CCcE
Q 041205 121 GALIENTGVAQLKKVAFVGSGPMPLTSIILASQ---HM--------------------------------------KSTH 159 (535)
Q Consensus 121 ~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~---~l--------------------------------------~Ga~ 159 (535)
..+....+..++.+|+|.+||++++ +|-.|.. .. +..+
T Consensus 180 a~ll~~~~~~~~~~llDP~CGSGt~-lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~ 258 (703)
T 3v97_A 180 AAIVMRSGWQPGTPLLDPMCGSGTL-LIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSH 258 (703)
T ss_dssp HHHHHHTTCCTTSCEEETTCTTSHH-HHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHhhCCCCCCeEEecCCCCcHH-HHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCcc
Confidence 3334444557789999999997544 3433331 11 2358
Q ss_pred EEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC--CCcceEEeccccCC----hhhHHHHHHHH---Hhhc
Q 041205 160 FDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL--GEYDCIILAALAGN----EEEKAKILGHI---RKYM 230 (535)
Q Consensus 160 VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL--~~FDvVfiaALVgm----~edK~~VL~eL---~rvL 230 (535)
|+|+|+|+.+++.|+.++...| +.+.|+|.++|+.++..+. +.||+|+..--.|. .++-..++..+ .+.+
T Consensus 259 i~G~Did~~av~~A~~N~~~ag-v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 259 FYGSDSDARVIQRARTNARLAG-IGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHTT-CGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcC-CCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999 7888999999998864443 27999998744442 22334444444 4455
Q ss_pred ccCeEEEEEcc
Q 041205 231 KEGGVLLVRSA 241 (535)
Q Consensus 231 KPGGvLVvRsa 241 (535)
.|||.+.+-++
T Consensus 338 ~~g~~~~ilt~ 348 (703)
T 3v97_A 338 FGGWNLSLFSA 348 (703)
T ss_dssp CTTCEEEEEES
T ss_pred CCCCeEEEEeC
Confidence 58998877664
No 278
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.30 E-value=3.3e-06 Score=82.05 Aligned_cols=106 Identities=14% Similarity=0.138 Sum_probs=67.8
Q ss_pred HHhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCC
Q 041205 124 IENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGE 203 (535)
Q Consensus 124 ~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~ 203 (535)
...+.+.++++|||||||+ |.-+..++++ +..+|+|||+|+.+++.+++. + ..+++++++|+.+++.+...
T Consensus 24 v~~~~~~~~~~VLDiG~G~-G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~--~~~v~~i~~D~~~~~~~~~~ 94 (249)
T 3ftd_A 24 AEELNIEEGNTVVEVGGGT-GNLTKVLLQH--PLKKLYVIELDREMVENLKSI----G--DERLEVINEDASKFPFCSLG 94 (249)
T ss_dssp HHHTTCCTTCEEEEEESCH-HHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----C--CTTEEEECSCTTTCCGGGSC
T ss_pred HHhcCCCCcCEEEEEcCch-HHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----c--CCCeEEEEcchhhCChhHcc
Confidence 3344557889999999996 5555677672 358999999999999999877 2 15799999999876543211
Q ss_pred cceEEeccccCChhhHHHHHHHHHhhc--ccCeEEEEEc
Q 041205 204 YDCIILAALAGNEEEKAKILGHIRKYM--KEGGVLLVRS 240 (535)
Q Consensus 204 FDvVfiaALVgm~edK~~VL~eL~rvL--KPGGvLVvRs 240 (535)
.++++++.+- . .--..++.++.+.. -+++++++-.
T Consensus 95 ~~~~vv~NlP-y-~i~~~il~~ll~~~~~~~~~~~m~Qk 131 (249)
T 3ftd_A 95 KELKVVGNLP-Y-NVASLIIENTVYNKDCVPLAVFMVQK 131 (249)
T ss_dssp SSEEEEEECC-T-TTHHHHHHHHHHTGGGCSEEEEEEEH
T ss_pred CCcEEEEECc-h-hccHHHHHHHHhcCCCCceEEEEEeH
Confidence 1334443332 1 11234455554432 3455666643
No 279
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.25 E-value=2e-06 Score=85.30 Aligned_cols=70 Identities=9% Similarity=0.154 Sum_probs=52.9
Q ss_pred HHHhhCCCCCCEEEEEccCCChhhHHHHHhhcCC-CcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc
Q 041205 123 LIENTGVAQLKKVAFVGSGPMPLTSIILASQHMK-STHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 123 L~~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~-Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~ 199 (535)
+...+.+.++.+|||||||++.+|. .++++... +++|+|||+|+++++.+++.. . .+++|+++|+.+++.
T Consensus 34 iv~~~~~~~~~~VLEIG~G~G~lt~-~La~~~~~~~~~V~avDid~~~l~~a~~~~---~---~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 34 IVAAIRPERGERMVEIGPGLGALTG-PVIARLATPGSPLHAVELDRDLIGRLEQRF---G---ELLELHAGDALTFDF 104 (279)
T ss_dssp HHHHHCCCTTCEEEEECCTTSTTHH-HHHHHHCBTTBCEEEEECCHHHHHHHHHHH---G---GGEEEEESCGGGCCG
T ss_pred HHHhcCCCCcCEEEEEccccHHHHH-HHHHhCCCcCCeEEEEECCHHHHHHHHHhc---C---CCcEEEECChhcCCh
Confidence 3334456789999999999866664 55553222 345999999999999999983 3 479999999987654
No 280
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.21 E-value=2.1e-06 Score=92.27 Aligned_cols=117 Identities=14% Similarity=0.062 Sum_probs=83.4
Q ss_pred HhhCCCCCCEEEEEccCCChhhHHHHHhhc---C--------------CCcEEEEEeCChhHHHHHHHHHhhcCCcCC--
Q 041205 125 ENTGVAQLKKVAFVGSGPMPLTSIILASQH---M--------------KSTHFDNIDIDETANNLARRIVSSDDEIEK-- 185 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGSGplPlTAI~LAk~~---l--------------~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~-- 185 (535)
..+...++.+|+|.|||++++... ++++. . ....|+|+|+|+.++++|+.++.-.| +..
T Consensus 163 ~~l~p~~~~~VlDPaCGSG~fLi~-a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g-i~~~~ 240 (541)
T 2ar0_A 163 HLLKPQPREVVQDPAAGTAGFLIE-ADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD-IEGNL 240 (541)
T ss_dssp HHHCCCTTCCEEETTCTTTHHHHH-HHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT-CCCBG
T ss_pred HHhccCCCCeEecCCcccchHHHH-HHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC-CCccc
Confidence 334446778999999998776543 33321 1 12479999999999999999887777 443
Q ss_pred --CeEEEEccccccc-cCCCCcceEEeccccCCh--------------hhHHHHHHHHHhhcccCeEEEEEcccc
Q 041205 186 --RMKFLTCDIMEVK-EKLGEYDCIILAALAGNE--------------EEKAKILGHIRKYMKEGGVLLVRSAKG 243 (535)
Q Consensus 186 --rI~Fi~GDA~el~-~dL~~FDvVfiaALVgm~--------------edK~~VL~eL~rvLKPGGvLVvRsa~G 243 (535)
++.++++|....+ .....||+|+..--.+.. .....++.++.+.|+|||++++-.++|
T Consensus 241 ~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 241 DHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp GGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred cccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 2789999987543 234679999975333210 113479999999999999988877655
No 281
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.11 E-value=4.7e-06 Score=77.43 Aligned_cols=87 Identities=16% Similarity=0.168 Sum_probs=65.5
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC-CCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL-GEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL-~~FDvVf 208 (535)
.++.||+|||||+++--|..||++ .|..|+++|+++.+++ |++.|+.+-..++ .+||+|+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~--~g~~V~atDInp~Av~-----------------~v~dDiF~P~~~~Y~~~DLIY 94 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH--SKVDLVLTDIKPSHGG-----------------IVRDDITSPRMEIYRGAALIY 94 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH--SCCEEEEECSSCSSTT-----------------EECCCSSSCCHHHHTTEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHh--CCCeEEEEECCccccc-----------------eEEccCCCCcccccCCcCEEE
Confidence 557899999999866689999863 6889999999999876 7788886533222 4799998
Q ss_pred eccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 209 LAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 209 iaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....- ++-...+-.+++ +-|+-++++.
T Consensus 95 sirPP---~El~~~i~~lA~--~v~adliI~p 121 (153)
T 2k4m_A 95 SIRPP---AEIHSSLMRVAD--AVGARLIIKP 121 (153)
T ss_dssp EESCC---TTTHHHHHHHHH--HHTCEEEEEC
T ss_pred EcCCC---HHHHHHHHHHHH--HcCCCEEEEc
Confidence 76444 566677777776 4467777765
No 282
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.88 E-value=0.00017 Score=71.60 Aligned_cols=138 Identities=12% Similarity=0.059 Sum_probs=95.0
Q ss_pred CccccccCccchhhHHhHHHH--HHHHHHhhCCCCCCEEEEEccCCChhhHHHHHhh------cCCCcEEEEEe-----C
Q 041205 99 PLNDLNRFPYYENYVKLAKLE--YGALIENTGVAQLKKVAFVGSGPMPLTSIILASQ------HMKSTHFDNID-----I 165 (535)
Q Consensus 99 pl~~L~~FpYy~NYv~LirlE--~~lL~~~~~l~~pkRVLeIGSGplPlTAI~LAk~------~l~Ga~VtGID-----I 165 (535)
+.+.|+.|+.|..-..+++.- +.++..+. .-+-.|+|+|+- -|.|++.+|.. +.++.+|.++| -
T Consensus 37 ~~e~l~~~~~~~~~~~l~~~l~~~~l~~~i~--~vpG~ivE~GV~-rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P 113 (257)
T 3tos_A 37 TEELVNNLPLFLRRHQMTDLLSMDALYRQVL--DVPGVIMEFGVR-FGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFP 113 (257)
T ss_dssp GGGGGGCGGGGCCHHHHHHHHHHHHHHHHTT--TSCSEEEEECCT-TCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCC
T ss_pred hHHHHHhHHhhhhHHHHHHHHHHHHHHHHhh--CCCCeEEEEecc-cCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCC
Confidence 345578888877766666543 24433333 346799999997 57888887651 12568899999 2
Q ss_pred Ch----------------------hHHHH---HHHHHhhcCCcCCCeEEEEccccccccC------CCCcceEEeccccC
Q 041205 166 DE----------------------TANNL---ARRIVSSDDEIEKRMKFLTCDIMEVKEK------LGEYDCIILAALAG 214 (535)
Q Consensus 166 Dp----------------------eAIel---AR~li~~lG~Ls~rI~Fi~GDA~el~~d------L~~FDvVfiaALVg 214 (535)
.+ +.++. .+.+.++.|.+.++|+++.|++.+.+.. ...||+||+|+..
T Consensus 114 ~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~- 192 (257)
T 3tos_A 114 DVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL- 192 (257)
T ss_dssp SCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-
T ss_pred CCccccccccccccCcccccchhHHHHHHHHHHHhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-
Confidence 21 11121 1222345773358999999999876543 2359999999865
Q ss_pred ChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 215 NEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 215 m~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
-+....+++.+.++|+|||+|++++.
T Consensus 193 -Y~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 193 -YEPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp -HHHHHHHHHHHGGGEEEEEEEEESST
T ss_pred -cchHHHHHHHHHHHhCCCcEEEEcCC
Confidence 25677889999999999999999985
No 283
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.79 E-value=1.9e-05 Score=85.26 Aligned_cols=108 Identities=11% Similarity=0.000 Sum_probs=76.9
Q ss_pred CEEEEEccCCChhhHHHHHhhcCC---------------CcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMK---------------STHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV 197 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~---------------Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el 197 (535)
.+|+|.+||++++..-. ++ ++. ...|+|+|+|+.++.+|+.++.-.| +..+|.+.+||....
T Consensus 246 ~~VlDPaCGSG~fLi~a-~~-~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~i~i~~gDtL~~ 322 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSS-DK-FIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG-IDFNFGKKNADSFLD 322 (544)
T ss_dssp EEEEESSCTTCHHHHHH-HH-HHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT-CCCBCCSSSCCTTTS
T ss_pred CeEeCcccCcCcHHHHH-HH-HHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC-CCcccceeccchhcC
Confidence 49999999987664332 22 111 4689999999999999999988888 666666689998654
Q ss_pred cc-CCCCcceEEeccccCC----h-------------------------hhHHHHHHHHHhhcccCeEEEEEcccc
Q 041205 198 KE-KLGEYDCIILAALAGN----E-------------------------EEKAKILGHIRKYMKEGGVLLVRSAKG 243 (535)
Q Consensus 198 ~~-dL~~FDvVfiaALVgm----~-------------------------edK~~VL~eL~rvLKPGGvLVvRsa~G 243 (535)
+. ....||+|+..--.+. . ..-..++.++.+.|+|||++++-.++|
T Consensus 323 ~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 323 DQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp CSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred cccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 32 2346999997422211 0 001268999999999999988776655
No 284
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.75 E-value=5.9e-05 Score=76.18 Aligned_cols=76 Identities=14% Similarity=0.060 Sum_probs=60.0
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC-----CC
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK-----LG 202 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d-----L~ 202 (535)
.+.++..++|.+||.+|.|..++ ++ +++|+|+|+|+++++.|++ +.. ++++|+++|..++... .+
T Consensus 19 ~~~~gg~~VD~T~G~GGHS~~il-~~---~g~VigiD~Dp~Ai~~A~~-L~~-----~rv~lv~~~f~~l~~~L~~~g~~ 88 (285)
T 1wg8_A 19 AVRPGGVYVDATLGGAGHARGIL-ER---GGRVIGLDQDPEAVARAKG-LHL-----PGLTVVQGNFRHLKRHLAALGVE 88 (285)
T ss_dssp TCCTTCEEEETTCTTSHHHHHHH-HT---TCEEEEEESCHHHHHHHHH-TCC-----TTEEEEESCGGGHHHHHHHTTCS
T ss_pred CCCCCCEEEEeCCCCcHHHHHHH-HC---CCEEEEEeCCHHHHHHHHh-hcc-----CCEEEEECCcchHHHHHHHcCCC
Confidence 34778999999999888886555 52 7899999999999999998 543 4899999998876431 24
Q ss_pred CcceEEecccc
Q 041205 203 EYDCIILAALA 213 (535)
Q Consensus 203 ~FDvVfiaALV 213 (535)
.||.|+++-.+
T Consensus 89 ~vDgIL~DLGv 99 (285)
T 1wg8_A 89 RVDGILADLGV 99 (285)
T ss_dssp CEEEEEEECSC
T ss_pred CcCEEEeCCcc
Confidence 58888887555
No 285
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.74 E-value=0.00016 Score=78.19 Aligned_cols=112 Identities=13% Similarity=0.134 Sum_probs=81.3
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhc--CCCcEEEEEeCChhHHHHHHHHHhhcCCcC-CCeEEEEcccccc--c-cCCCC
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQH--MKSTHFDNIDIDETANNLARRIVSSDDEIE-KRMKFLTCDIMEV--K-EKLGE 203 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~--l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls-~rI~Fi~GDA~el--~-~dL~~ 203 (535)
.++.+|+|.+||++++..- ++++. .....|+|+|+|+.++.+|+.++.-.| +. .++.+.++|.... + .....
T Consensus 220 ~~~~~VlDPaCGSG~fLi~-a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~~~~I~~gDtL~~d~p~~~~~~ 297 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLN-AKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG-VPIENQFLHNADTLDEDWPTQEPTN 297 (542)
T ss_dssp CTTCEEEETTCTTSTTGGG-HHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEESCTTTSCSCCSSCCC
T ss_pred CCCCEEeecccchhHHHHH-HHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC-CCcCccceEecceeccccccccccc
Confidence 4678999999998776543 33422 236799999999999999999987777 54 4789999998754 2 23356
Q ss_pred cceEEeccccCC---h-----h---------------hHHHHHHHHHhhcc-cCeEEEEEcccc
Q 041205 204 YDCIILAALAGN---E-----E---------------EKAKILGHIRKYMK-EGGVLLVRSAKG 243 (535)
Q Consensus 204 FDvVfiaALVgm---~-----e---------------dK~~VL~eL~rvLK-PGGvLVvRsa~G 243 (535)
||+|+..--.+. . . .-..++.++.+.|+ |||++++-.++|
T Consensus 298 fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 298 FDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp BSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred ccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 999995411110 0 0 01248999999999 999998877665
No 286
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.69 E-value=6.4e-05 Score=78.45 Aligned_cols=88 Identities=14% Similarity=0.204 Sum_probs=65.6
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
+.++++|+|+||+|+|.|-.+ ++ .|++|++||+.+= +-.+ ... .+|+|+.+|+.+.....+.||+|+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l-~~---rg~~V~aVD~~~l----~~~l-~~~----~~V~~~~~d~~~~~~~~~~~D~vv 275 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQL-VK---RNMWVYSVDNGPM----AQSL-MDT----GQVTWLREDGFKFRPTRSNISWMV 275 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHH-HH---TTCEEEEECSSCC----CHHH-HTT----TCEEEECSCTTTCCCCSSCEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHH-HH---CCCEEEEEEhhhc----Chhh-ccC----CCeEEEeCccccccCCCCCcCEEE
Confidence 478999999999999999764 45 4789999997641 1111 122 479999999987765556799999
Q ss_pred eccccCChhhHHHHHHHHHhhcccC
Q 041205 209 LAALAGNEEEKAKILGHIRKYMKEG 233 (535)
Q Consensus 209 iaALVgm~edK~~VL~eL~rvLKPG 233 (535)
.|-. +...+++.-+.+.+..|
T Consensus 276 sDm~----~~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 276 CDMV----EKPAKVAALMAQWLVNG 296 (375)
T ss_dssp ECCS----SCHHHHHHHHHHHHHTT
T ss_pred EcCC----CChHHhHHHHHHHHhcc
Confidence 9733 46677877777777766
No 287
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=97.60 E-value=6.4e-05 Score=74.68 Aligned_cols=101 Identities=11% Similarity=0.059 Sum_probs=70.5
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEE-ccccccccCCCCcce
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLT-CDIMEVKEKLGEYDC 206 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~-GDA~el~~dL~~FDv 206 (535)
.+ ++++||-+|+|++|..++.+|+..+||++|+++|.+++..+.+++ +| ...-+.... .|..+.......||+
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lG-a~~vi~~~~~~~~~~~~~~g~g~D~ 241 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LG-ADYVSEMKDAESLINKLTDGLGASI 241 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HT-CSEEECHHHHHHHHHHHHTTCCEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hC-CCEEeccccchHHHHHhhcCCCccE
Confidence 56 899999999999999999999964458999999999999888765 45 211111101 111111112236999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
||-.... ...++...+.|+|||+++.-.
T Consensus 242 vid~~g~------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 242 AIDLVGT------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEESSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCCC------hHHHHHHHHHhhcCCEEEEeC
Confidence 9975432 346788889999999998743
No 288
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.57 E-value=8.6e-05 Score=73.48 Aligned_cols=101 Identities=20% Similarity=0.297 Sum_probs=71.2
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccc-cccCCCCcc
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIME-VKEKLGEYD 205 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~e-l~~dL~~FD 205 (535)
..+.++++||-+|+|++|+.++.+|+. .|++|+++|.+++..+.+++ +| ...-+.....|..+ +....+.+|
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~----lG-a~~~i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 162 TDTRPGQWVVISGIGGLGHVAVQYARA--MGLRVAAVDIDDAKLNLARR----LG-AEVAVNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp TTCCTTSEEEEECCSTTHHHHHHHHHH--TTCEEEEEESCHHHHHHHHH----TT-CSEEEETTTSCHHHHHHHHHSSEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCHHHHHHHHH----cC-CCEEEeCCCcCHHHHHHHhCCCCC
Confidence 456899999999999999999999994 58899999999999887765 56 21111111111111 111113699
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+||..+.. ...++...+.|+|||++++-.
T Consensus 235 ~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 235 GVLVTAVS------PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EEEESSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred EEEEeCCC------HHHHHHHHHHhccCCEEEEeC
Confidence 99876433 457888899999999998753
No 289
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.55 E-value=6e-05 Score=75.60 Aligned_cols=102 Identities=19% Similarity=0.177 Sum_probs=70.6
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccc-ccc-CCC
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIME-VKE-KLG 202 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~e-l~~-dL~ 202 (535)
...+.++++||-+|+|++|..++.+|+. .|+ +|+++|.+++..+.++++ | ...-+.....|..+ +.. ..+
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~a~qlak~--~Ga~~Vi~~~~~~~~~~~a~~l----G-a~~vi~~~~~~~~~~~~~~~~g 257 (371)
T 1f8f_A 185 ALKVTPASSFVTWGAGAVGLSALLAAKV--CGASIIIAVDIVESRLELAKQL----G-ATHVINSKTQDPVAAIKEITDG 257 (371)
T ss_dssp TTCCCTTCEEEEESCSHHHHHHHHHHHH--HTCSEEEEEESCHHHHHHHHHH----T-CSEEEETTTSCHHHHHHHHTTS
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEECCCHHHHHHHHHc----C-CCEEecCCccCHHHHHHHhcCC
Confidence 3467889999999999999999999994 477 799999999998888654 5 21111111112111 111 112
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.||+||-.... ...++...+.|+|||++++-.
T Consensus 258 g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 258 GVNFALESTGS------PEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp CEEEEEECSCC------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCcEEEECCCC------HHHHHHHHHHHhcCCEEEEeC
Confidence 69999865332 356888899999999998743
No 290
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.51 E-value=0.00012 Score=73.16 Aligned_cols=97 Identities=20% Similarity=0.218 Sum_probs=69.9
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcc------cc-ccc
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCD------IM-EVK 198 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GD------A~-el~ 198 (535)
..+.++++||-+|+|++|+.++.+|+. .|+ +|+++|.+++..+.+++ +| . + .++..+ .. .+.
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~----lG-a-~--~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKA--MGAAQVVVTDLSATRLSKAKE----IG-A-D--LVLQISKESPQEIARKVE 236 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHH----TT-C-S--EEEECSSCCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHH----hC-C-C--EEEcCcccccchHHHHHH
Confidence 456889999999999999999999994 577 99999999998887764 56 2 2 122211 11 111
Q ss_pred --cCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 199 --EKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 199 --~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.. .+||+||-.... ...+....+.|+|||++++-.
T Consensus 237 ~~~~-~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 237 GQLG-CKPEVTIECTGA------EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHT-SCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECS
T ss_pred HHhC-CCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEEe
Confidence 12 469999975433 346778889999999998753
No 291
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.50 E-value=0.0001 Score=74.38 Aligned_cols=102 Identities=21% Similarity=0.235 Sum_probs=72.3
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC----
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK---- 200 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d---- 200 (535)
...+.++++||-+|+|++|..++.+|+. .|+ +|+++|.+++..+.+++ +| ...-+.+...|..+....
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~----lG-a~~vi~~~~~~~~~~i~~~~~~ 249 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARL--AGATTVILSTRQATKRRLAEE----VG-ATATVDPSAGDVVEAIAGPVGL 249 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCHHHHHHHHH----HT-CSEEECTTSSCHHHHHHSTTSS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHH----cC-CCEEECCCCcCHHHHHHhhhhc
Confidence 3467899999999999999999999994 577 99999999999888776 45 211111112222221111
Q ss_pred -CCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 201 -LGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 201 -L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.++||+||-.... ...++...+.|++||++++-.
T Consensus 250 ~~gg~Dvvid~~G~------~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 250 VPGGVDVVIECAGV------AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp STTCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred cCCCCCEEEECCCC------HHHHHHHHHHhccCCEEEEEe
Confidence 1369999975332 456888899999999998854
No 292
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.47 E-value=0.00014 Score=73.25 Aligned_cols=141 Identities=13% Similarity=0.054 Sum_probs=79.6
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
+.++.+|||+||||+|.|-.+..+ .+-..|+|+|+..+.....+. ....| .++.+..+++.........||+|+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~--~~~~~v~g~dVGvDl~~~pi~-~~~~g---~~ii~~~~~~dv~~l~~~~~DlVl 145 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQ--KEVSGVKGFTLGRDGHEKPMN-VQSLG---WNIITFKDKTDIHRLEPVKCDTLL 145 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTS--TTEEEEEEECCCCTTCCCCCC-CCBTT---GGGEEEECSCCTTTSCCCCCSEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHh--cCCCcceeEEEeccCcccccc-cCcCC---CCeEEEeccceehhcCCCCccEEE
Confidence 478899999999999998655433 234578888887543100000 01112 144445555422222335699999
Q ss_pred ecccc--CC--hhhHH--HHHHHHHhhcccC-eEEEEEccc--ccccccCCCCcc---cc-CCcEEEEEEcCCC--ccee
Q 041205 209 LAALA--GN--EEEKA--KILGHIRKYMKEG-GVLLVRSAK--GARAFLYPVVEH---EL-FDFKVLSIFHPTN--DVIN 273 (535)
Q Consensus 209 iaALV--gm--~edK~--~VL~eL~rvLKPG-GvLVvRsa~--GlR~fLYP~Vdp---dl-~GFeil~v~hP~~--eVIN 273 (535)
.+..- |. ..+.. .+|+.+.++|+|| |.|++.-.. |- .+.. .+ .-|..+.+..|.. +-.-
T Consensus 146 sD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~------~~~~l~~~lk~~F~~V~~~KPaSR~~S~E 219 (277)
T 3evf_A 146 CDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMP------DVLEKLELLQRRFGGTVIRNPLSRNSTHE 219 (277)
T ss_dssp ECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSH------HHHHHHHHHHHHHCCEEECCTTSCTTCCC
T ss_pred ecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCc------cHHHHHHHHHHhcCCEEEEeCCCCCCCCc
Confidence 87432 32 12211 3568889999999 999996554 21 0110 12 3466666777832 1222
Q ss_pred eeEEEecC
Q 041205 274 SVVLLQLP 281 (535)
Q Consensus 274 SVVvARK~ 281 (535)
.+++++..
T Consensus 220 ~Y~V~~~r 227 (277)
T 3evf_A 220 MYYVSGAR 227 (277)
T ss_dssp EEEESSCC
T ss_pred eEEEEecC
Confidence 36666653
No 293
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.42 E-value=0.00035 Score=79.45 Aligned_cols=110 Identities=12% Similarity=0.109 Sum_probs=74.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCC---CcEEEEEeCChhHHHHH--HHHHhh----cCCcCCCeEEEEccccccc-c
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMK---STHFDNIDIDETANNLA--RRIVSS----DDEIEKRMKFLTCDIMEVK-E 199 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~---Ga~VtGIDIDpeAIelA--R~li~~----lG~Ls~rI~Fi~GDA~el~-~ 199 (535)
.++.+|+|.|||++++. +.++++ .+ ..+++|+|+|+.+++.| |.++.. .| . ....+..+|..+.. .
T Consensus 320 ~~g~rVLDPaCGSG~FL-IaaA~~-l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhG-i-~~~~I~~dD~L~~~~~ 395 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLL-ATVSAG-FNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSS-N-NAPTITGEDVCSLNPE 395 (878)
T ss_dssp CTTCEEEETTCTTSHHH-HHHHHT-STTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBT-T-BCCEEECCCGGGCCGG
T ss_pred CCCCEEEECCCCccHHH-HHHHHH-hcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcC-C-CcceEEecchhccccc
Confidence 45789999999986665 444452 32 46899999999999999 665544 23 2 23456666665421 2
Q ss_pred CCCCcceEEeccccC----Chh-------------------------hHHHHHHHHHhhcccCeEEEEEcccc
Q 041205 200 KLGEYDCIILAALAG----NEE-------------------------EKAKILGHIRKYMKEGGVLLVRSAKG 243 (535)
Q Consensus 200 dL~~FDvVfiaALVg----m~e-------------------------dK~~VL~eL~rvLKPGGvLVvRsa~G 243 (535)
....||+|+..--.+ +.. -...++.++.+.|+|||++++-.++|
T Consensus 396 ~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 396 DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred ccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 335799999753331 111 13457889999999999998877655
No 294
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.42 E-value=0.00023 Score=70.81 Aligned_cols=93 Identities=20% Similarity=0.156 Sum_probs=70.0
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceE
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCI 207 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvV 207 (535)
.+.++++||-+|+|++|+.++.+|+. .|++|+++|.+++..+.+++ +| . +. .+ .|...+. ..||+|
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~----lG-a-~~-v~--~~~~~~~---~~~D~v 238 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVA--MGAEVSVFARNEHKKQDALS----MG-V-KH-FY--TDPKQCK---EELDFI 238 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHH--TTCEEEEECSSSTTHHHHHH----TT-C-SE-EE--SSGGGCC---SCEEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHH--CCCeEEEEeCCHHHHHHHHh----cC-C-Ce-ec--CCHHHHh---cCCCEE
Confidence 67899999999999999999999994 58899999999999887764 56 2 22 22 3432221 279999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|-.... ...+....+.|+|||++++-.
T Consensus 239 id~~g~------~~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 239 ISTIPT------HYDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EECCCS------CCCHHHHHTTEEEEEEEEECC
T ss_pred EECCCc------HHHHHHHHHHHhcCCEEEEEC
Confidence 964332 125677888999999998854
No 295
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.42 E-value=0.00058 Score=69.56 Aligned_cols=146 Identities=15% Similarity=0.147 Sum_probs=88.8
Q ss_pred CCCCEEEEEccCCChhhHHHH---HhhcCCCcE--EEEEeCCh---------hHHHHHHHHHhhcCCc-CC--CeEEEEc
Q 041205 130 AQLKKVAFVGSGPMPLTSIIL---ASQHMKSTH--FDNIDIDE---------TANNLARRIVSSDDEI-EK--RMKFLTC 192 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~L---Ak~~l~Ga~--VtGIDIDp---------eAIelAR~li~~lG~L-s~--rI~Fi~G 192 (535)
.+.-+|||+|-| .|+-++.. +.+.-+..+ ++.+|.++ ..-++.+.+....... .. ..++..|
T Consensus 95 ~~~~~IlE~GFG-TGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~G 173 (308)
T 3vyw_A 95 RKVIRILDVGFG-LGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLG 173 (308)
T ss_dssp CSEEEEEEECCT-TSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEES
T ss_pred CCCcEEEEeCCC-ccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEec
Confidence 345689999999 58855432 222245554 56666532 2334455555443211 12 3467899
Q ss_pred cccccccCCC--CcceEEeccccCChhhH------HHHHHHHHhhcccCeEEEEEcccccccccCCCCcc--ccCCcEEE
Q 041205 193 DIMEVKEKLG--EYDCIILAALAGNEEEK------AKILGHIRKYMKEGGVLLVRSAKGARAFLYPVVEH--ELFDFKVL 262 (535)
Q Consensus 193 DA~el~~dL~--~FDvVfiaALVgm~edK------~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~Vdp--dl~GFeil 262 (535)
|+.+....+. .||+||+|+.- +.| ..+|..+++.++|||+++.-++.|. |-- ...||++.
T Consensus 174 Da~~~l~~l~~~~~Da~flDgFs---P~kNPeLWs~e~f~~l~~~~~pgg~laTYtaag~-------VRR~L~~aGF~V~ 243 (308)
T 3vyw_A 174 DARKRIKEVENFKADAVFHDAFS---PYKNPELWTLDFLSLIKERIDEKGYWVSYSSSLS-------VRKSLLTLGFKVG 243 (308)
T ss_dssp CHHHHGGGCCSCCEEEEEECCSC---TTTSGGGGSHHHHHHHHTTEEEEEEEEESCCCHH-------HHHHHHHTTCEEE
T ss_pred hHHHHHhhhcccceeEEEeCCCC---cccCcccCCHHHHHHHHHHhCCCcEEEEEeCcHH-------HHHHHHHCCCEEE
Confidence 9988766654 48999999765 333 6899999999999999999877661 221 23799984
Q ss_pred EEEcCCCcceeeeEEEecCCCCCccc
Q 041205 263 SIFHPTNDVINSVVLLQLPKDPPKLV 288 (535)
Q Consensus 263 ~v~hP~~eVINSVVvARK~~~~~~l~ 288 (535)
. ..+.+.- .-.++|.+..+.|.+.
T Consensus 244 k-~~G~g~K-Reml~A~~~~~~~pl~ 267 (308)
T 3vyw_A 244 S-SREIGRK-RKGTVASLKAPVPPME 267 (308)
T ss_dssp E-EECC----CEEEEEESSSCCCCCC
T ss_pred e-cCCCCCC-CceeEEecCCCCCCCC
Confidence 3 3332222 2356666654444333
No 296
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=97.41 E-value=0.00028 Score=70.37 Aligned_cols=100 Identities=20% Similarity=0.203 Sum_probs=72.4
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcE-EEEEeCChhHHHHHHHHHhhcCCcCCCeEEEE-----ccccc-ccc
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTH-FDNIDIDETANNLARRIVSSDDEIEKRMKFLT-----CDIME-VKE 199 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~-VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~-----GDA~e-l~~ 199 (535)
..+.++++||-+|+|++|+.++.+|+. .|++ |+++|.+++..+.++++ .. . -+.+.. .|..+ +..
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~l-~~-~----~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKA--AGACPLVITDIDEGRLKFAKEI-CP-E----VVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHH--TTCCSEEEEESCHHHHHHHHHH-CT-T----CEEEECCSCCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHh-ch-h----cccccccccchHHHHHHHHH
Confidence 467899999999999999999999994 5776 99999999999999987 21 1 233321 11111 111
Q ss_pred --CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 --KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 --dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.-.+||+||-.... ...+....+.|++||++++-.
T Consensus 247 ~t~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 247 SFGGIEPAVALECTGV------ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HTSSCCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECC
T ss_pred HhCCCCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEEc
Confidence 12369999975332 356788889999999998754
No 297
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.40 E-value=7.9e-05 Score=74.22 Aligned_cols=101 Identities=16% Similarity=0.172 Sum_probs=70.1
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc---CCC
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE---KLG 202 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~---dL~ 202 (535)
..+.++++||-+|+|++|+.++.+|+ ..|+ +|+++|.+++..+.++++ | ...-+.....|..+... .-.
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~--~~Ga~~Vi~~~~~~~~~~~~~~l----G-a~~vi~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGAN--HLGAGRIFAVGSRKHCCDIALEY----G-ATDIINYKNGDIVEQILKATDGK 234 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHH--TTTCSSEEEECCCHHHHHHHHHH----T-CCEEECGGGSCHHHHHHHHTTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHH--HcCCcEEEEECCCHHHHHHHHHh----C-CceEEcCCCcCHHHHHHHHcCCC
Confidence 46789999999999999999999999 3577 899999999988887764 5 21111111112111111 113
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.||+||-.... ...++...+.|+|||+++.-.
T Consensus 235 g~D~v~d~~g~------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 235 GVDKVVIAGGD------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp CEEEEEECSSC------TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCCC------hHHHHHHHHHHhcCCEEEEec
Confidence 59999964332 356788889999999998754
No 298
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=97.36 E-value=0.00017 Score=71.53 Aligned_cols=100 Identities=12% Similarity=0.108 Sum_probs=70.8
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc---CCCCc
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE---KLGEY 204 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~---dL~~F 204 (535)
.+.++++||-+|+|++|+.++.+|+. ..+++|+++|.+++..+.+++ +| ...-+.. ..|..+... .-..+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~-~g~~~Vi~~~~~~~~~~~~~~----lG-a~~~i~~-~~~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRA-VSAARVIAVDLDDDRLALARE----VG-ADAAVKS-GAGAADAIRELTGGQGA 240 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHH-HCCCEEEEEESCHHHHHHHHH----TT-CSEEEEC-STTHHHHHHHHHGGGCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCCHHHHHHHHH----cC-CCEEEcC-CCcHHHHHHHHhCCCCC
Confidence 56889999999999999999999994 457899999999999888765 56 2111111 111111111 11269
Q ss_pred ceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 205 DCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 205 DvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|+||-.... ...++...+.|+|||++++-.
T Consensus 241 d~v~d~~G~------~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 241 TAVFDFVGA------QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEESSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred eEEEECCCC------HHHHHHHHHHHhcCCEEEEEC
Confidence 999975332 457888999999999998854
No 299
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.32 E-value=0.00046 Score=68.69 Aligned_cols=99 Identities=16% Similarity=0.173 Sum_probs=70.1
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc---ccc-cccc--C
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC---DIM-EVKE--K 200 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G---DA~-el~~--d 200 (535)
..+.++++||-+|+|++|+.++.+|+. .|++|+++|.+++..+.+++ +| . + ..+-.. |.. .+.. .
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~----lG-a-~-~~~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKA--YGAFVVCTARSPRRLEVAKN----CG-A-D-VTLVVDPAKEEESSIIERIR 234 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHH----TT-C-S-EEEECCTTTSCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEcCCHHHHHHHHH----hC-C-C-EEEcCcccccHHHHHHHHhc
Confidence 456889999999999999999999994 58889999999999887764 56 2 2 112111 111 1111 1
Q ss_pred ---CCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 201 ---LGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 201 ---L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
-..||+||-.... ...++...+.|+|||+++.-.
T Consensus 235 ~~~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 235 SAIGDLPNVTIDCSGN------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHSSSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECS
T ss_pred cccCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 1369999975432 346788888999999998753
No 300
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.31 E-value=0.00029 Score=69.95 Aligned_cols=100 Identities=16% Similarity=0.226 Sum_probs=69.4
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC-CCCcce
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK-LGEYDC 206 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d-L~~FDv 206 (535)
.+.++++||-+|+|++|..++.+|+. .|++|+++|.+++..+.+++ +| ...-+.+...|..+.... .+.+|+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----lG-a~~~~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKA--MGLNVVAVDIGDEKLELAKE----LG-ADLVVNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHH--TTCEEEEECSCHHHHHHHHH----TT-CSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHH----CC-CCEEecCCCccHHHHHHHHhCCCCE
Confidence 56889999999999999999999994 58899999999999887764 56 211010000111110000 146999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
||-.+.. ...++...+.|++||+++.-.
T Consensus 234 vid~~g~------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 234 AVVTAVS------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EEESSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCCC------HHHHHHHHHHhhcCCEEEEec
Confidence 9875432 346788889999999998754
No 301
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.31 E-value=0.00015 Score=65.99 Aligned_cols=98 Identities=9% Similarity=0.111 Sum_probs=66.9
Q ss_pred hCCCCCCEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc--cccc-ccc--C
Q 041205 127 TGVAQLKKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC--DIME-VKE--K 200 (535)
Q Consensus 127 ~~l~~pkRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G--DA~e-l~~--d 200 (535)
..+.++++||-+| +|++|..++.+++. .|++|+++|.+++..+.+++ .| . ...+-.. +..+ +.. .
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~--~G~~V~~~~~~~~~~~~~~~----~g-~--~~~~d~~~~~~~~~~~~~~~ 104 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKM--IGARIYTTAGSDAKREMLSR----LG-V--EYVGDSRSVDFADEILELTD 104 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHT----TC-C--SEEEETTCSTHHHHHHHHTT
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHH----cC-C--CEEeeCCcHHHHHHHHHHhC
Confidence 4567899999999 68889988888874 57899999999988776643 46 2 1112111 1111 111 1
Q ss_pred CCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 201 LGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 201 L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
...+|+|+..+ | ...+....+.|+|||+++.-.
T Consensus 105 ~~~~D~vi~~~--g-----~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 105 GYGVDVVLNSL--A-----GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp TCCEEEEEECC--C-----THHHHHHHHTEEEEEEEEECS
T ss_pred CCCCeEEEECC--c-----hHHHHHHHHHhccCCEEEEEc
Confidence 13599999653 3 146788899999999998754
No 302
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=97.29 E-value=0.00029 Score=70.96 Aligned_cols=95 Identities=9% Similarity=0.082 Sum_probs=67.6
Q ss_pred CCCEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEE-ccccccccC--CCCcce
Q 041205 131 QLKKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLT-CDIMEVKEK--LGEYDC 206 (535)
Q Consensus 131 ~pkRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~-GDA~el~~d--L~~FDv 206 (535)
++++||-+| +|++|..++.+|+ +..|++|+++|.+++..+.+++ +| . +.+ +-. .|..+.... .+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak-~~~g~~Vi~~~~~~~~~~~~~~----lG-a-d~v-i~~~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIAR-QRTDLTVIATASRPETQEWVKS----LG-A-HHV-IDHSKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHH-HHCCSEEEEECSSHHHHHHHHH----TT-C-SEE-ECTTSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HhcCCEEEEEeCCHHHHHHHHH----cC-C-CEE-EeCCCCHHHHHHHhcCCCceE
Confidence 789999999 9999999999999 3468999999999998888765 56 2 111 111 111111111 136999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
||-... -...++.+.+.|+|||++++-
T Consensus 243 vid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 986432 245788889999999999875
No 303
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=97.28 E-value=0.00024 Score=71.39 Aligned_cols=99 Identities=20% Similarity=0.126 Sum_probs=69.6
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc----cccccccC-
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC----DIMEVKEK- 200 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G----DA~el~~d- 200 (535)
..+.++++||-+|+|++|..++.+|+. .|+ +|+++|.+++..+.+++ +| . +. .+-.. |..+....
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~----lG-a-~~-vi~~~~~~~~~~~~v~~~ 261 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKI--AGASRIIAIDINGEKFPKAKA----LG-A-TD-CLNPRELDKPVQDVITEL 261 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCGGGHHHHHH----TT-C-SE-EECGGGCSSCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHHH----hC-C-cE-EEccccccchHHHHHHHH
Confidence 456889999999999999999999994 477 89999999999887764 46 2 11 11111 11111110
Q ss_pred -CCCcceEEeccccCChhhHHHHHHHHHhhcccC-eEEEEEc
Q 041205 201 -LGEYDCIILAALAGNEEEKAKILGHIRKYMKEG-GVLLVRS 240 (535)
Q Consensus 201 -L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPG-GvLVvRs 240 (535)
.+.||+||-.... ...++...+.|++| |++++-.
T Consensus 262 ~~~g~Dvvid~~G~------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 262 TAGGVDYSLDCAGT------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HTSCBSEEEESSCC------HHHHHHHHHTBCTTTCEEEECC
T ss_pred hCCCccEEEECCCC------HHHHHHHHHHhhcCCCEEEEEC
Confidence 1369999965332 35678889999999 9998743
No 304
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.27 E-value=9e-05 Score=75.29 Aligned_cols=105 Identities=16% Similarity=0.146 Sum_probs=70.3
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccc-cc-cc--cCC
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDI-ME-VK--EKL 201 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA-~e-l~--~dL 201 (535)
..+.++++||-+|+|++|+.++.+|+. .|+ +|+++|.+++..+.++ ++| . +-+.....|. .+ +. ...
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~----~lG-a-~~i~~~~~~~~~~~~~~~~~g 252 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARL--LGAACVIVGDQNPERLKLLS----DAG-F-ETIDLRNSAPLRDQIDQILGK 252 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHH--HTCSEEEEEESCHHHHHHHH----TTT-C-EEEETTSSSCHHHHHHHHHSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCCHHHHHHHH----HcC-C-cEEcCCCcchHHHHHHHHhCC
Confidence 456889999999999999999999994 477 9999999999887765 456 2 2111111121 11 11 111
Q ss_pred CCcceEEeccccCCh--------hhHHHHHHHHHhhcccCeEEEEE
Q 041205 202 GEYDCIILAALAGNE--------EEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 202 ~~FDvVfiaALVgm~--------edK~~VL~eL~rvLKPGGvLVvR 239 (535)
..||+||-....... .+....++...+.|+|||++++-
T Consensus 253 ~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 253 PEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 269999865432100 01234788899999999998864
No 305
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=97.27 E-value=0.00017 Score=72.74 Aligned_cols=103 Identities=18% Similarity=0.153 Sum_probs=71.0
Q ss_pred HhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEE--Ecccccccc--
Q 041205 125 ENTGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFL--TCDIMEVKE-- 199 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi--~GDA~el~~-- 199 (535)
....+.++++||-+|+|++|+.++.+|+. .|+ +|+++|.+++..+.|+ ++| ...-+... ..|..+...
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~--~Ga~~Vi~~~~~~~~~~~a~----~lG-a~~vi~~~~~~~~~~~~i~~~ 259 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKT--AGASRIIGIDIDSKKYETAK----KFG-VNEFVNPKDHDKPIQEVIVDL 259 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHH--HTCSCEEEECSCTTHHHHHH----TTT-CCEEECGGGCSSCHHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHH----HcC-CcEEEccccCchhHHHHHHHh
Confidence 33467899999999999999999999994 477 8999999999988776 456 21111110 011111111
Q ss_pred CCCCcceEEeccccCChhhHHHHHHHHHhhcccC-eEEEEEc
Q 041205 200 KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEG-GVLLVRS 240 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPG-GvLVvRs 240 (535)
..+.||+||-.... ...++...+.|++| |++++-.
T Consensus 260 ~~gg~D~vid~~g~------~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 260 TDGGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp TTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred cCCCCCEEEECCCC------HHHHHHHHHHhhccCCEEEEEc
Confidence 11369999975332 45688889999997 9988754
No 306
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.26 E-value=0.00027 Score=71.37 Aligned_cols=143 Identities=10% Similarity=0.045 Sum_probs=81.8
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc-cccccccCCCCcce
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC-DIMEVKEKLGEYDC 206 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G-DA~el~~dL~~FDv 206 (535)
.+.++.+|||+||||+|+|-....+ .+-..|+|+|+....-..+.. ....| . +-+.|.++ |+.++ ....||+
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~--~gv~sV~GvdvG~d~~~~pi~-~~~~g-~-~ii~~~~~~dv~~l--~~~~~Dv 159 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASL--KNVKKVMAFTLGVQGHEKPIM-RTTLG-W-NLIRFKDKTDVFNM--EVIPGDT 159 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCC-CCBTT-G-GGEEEECSCCGGGS--CCCCCSE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHh--cCCCeeeeEEeccCccccccc-cccCC-C-ceEEeeCCcchhhc--CCCCcCE
Confidence 3578899999999999999765533 344679999998653222211 11223 1 22444433 44332 2356999
Q ss_pred EEecccc--CC--hhhHH--HHHHHHHhhcccC--eEEEEEccc--cccc-ccCCCCcccc-CCcEEEEEEcCCC--cce
Q 041205 207 IILAALA--GN--EEEKA--KILGHIRKYMKEG--GVLLVRSAK--GARA-FLYPVVEHEL-FDFKVLSIFHPTN--DVI 272 (535)
Q Consensus 207 VfiaALV--gm--~edK~--~VL~eL~rvLKPG--GvLVvRsa~--GlR~-fLYP~Vdpdl-~GFeil~v~hP~~--eVI 272 (535)
|+.|..- |. ..+.. .+|+-+.++|+|| |.|++.-.. |-.. -++. .+ .-|..+.+..|.. +-.
T Consensus 160 VLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~----~lk~~F~~V~~~KPaSR~~S~ 235 (282)
T 3gcz_A 160 LLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELS----RLQLKHGGGLVRVPLSRNSTH 235 (282)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHH----HHHHHHCCEEECCTTSCTTCC
T ss_pred EEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHH----HHHHhcCCEEEEcCCCcccCc
Confidence 9987443 33 12211 3567778899999 999997665 3100 0000 12 3466666777822 122
Q ss_pred eeeEEEecC
Q 041205 273 NSVVLLQLP 281 (535)
Q Consensus 273 NSVVvARK~ 281 (535)
-.+++++..
T Consensus 236 E~Y~V~~~r 244 (282)
T 3gcz_A 236 EMYWVSGTR 244 (282)
T ss_dssp CEEEETTCC
T ss_pred ceeEEEecC
Confidence 236666653
No 307
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=97.26 E-value=0.00022 Score=71.62 Aligned_cols=101 Identities=16% Similarity=0.088 Sum_probs=70.6
Q ss_pred HhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc----ccccccc
Q 041205 125 ENTGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC----DIMEVKE 199 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G----DA~el~~ 199 (535)
....+.++++||-+|+|++|+.++.+|+. .|+ +|+++|.+++..+.+++ +| . +. .+-.. |..+...
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~----lG-a-~~-vi~~~~~~~~~~~~i~ 255 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKA--AGASRIIGVGTHKDKFPKAIE----LG-A-TE-CLNPKDYDKPIYEVIC 255 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECSCGGGHHHHHH----TT-C-SE-EECGGGCSSCHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEECCCHHHHHHHHH----cC-C-cE-EEecccccchHHHHHH
Confidence 33467889999999999999999999994 477 89999999999887764 56 2 11 11111 1111111
Q ss_pred C--CCCcceEEeccccCChhhHHHHHHHHHhhcccC-eEEEEEc
Q 041205 200 K--LGEYDCIILAALAGNEEEKAKILGHIRKYMKEG-GVLLVRS 240 (535)
Q Consensus 200 d--L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPG-GvLVvRs 240 (535)
. .+.||+||-.... ...+....+.|+|| |+++.-.
T Consensus 256 ~~t~gg~Dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 256 EKTNGGVDYAVECAGR------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHhCCCCCEEEECCCC------HHHHHHHHHHHhcCCCEEEEEc
Confidence 1 1369999965332 35678889999999 9988743
No 308
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.25 E-value=0.00016 Score=73.13 Aligned_cols=97 Identities=19% Similarity=0.216 Sum_probs=68.7
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC-CCcce
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL-GEYDC 206 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL-~~FDv 206 (535)
.+.++++||-+|+|++|..++.+|+. .|++|+++|.+++..+.+++ +| . + .++..+-.+..... ..||+
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~Vi~~~~~~~~~~~a~~----lG-a-~--~vi~~~~~~~~~~~~~g~Dv 260 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHA--MGAHVVAFTTSEAKREAAKA----LG-A-D--EVVNSRNADEMAAHLKSFDF 260 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHH----HT-C-S--EEEETTCHHHHHTTTTCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cC-C-c--EEeccccHHHHHHhhcCCCE
Confidence 56889999999999999999999994 58899999999999888775 45 2 1 11211111111111 46999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
||-.... ...++...+.|+|||+++.-.
T Consensus 261 vid~~g~------~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 261 ILNTVAA------PHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEECCSS------CCCHHHHHTTEEEEEEEEECC
T ss_pred EEECCCC------HHHHHHHHHHhccCCEEEEec
Confidence 9965433 124567788999999988743
No 309
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=97.23 E-value=0.00029 Score=70.69 Aligned_cols=100 Identities=15% Similarity=0.152 Sum_probs=70.2
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc----cccccccC
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC----DIMEVKEK 200 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G----DA~el~~d 200 (535)
...+.++++||-+|+|++|..++.+|+. .|+ +|+++|.+++..+.+++ +| . +.+ +-.. |..+....
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~~Vi~~~~~~~~~~~~~~----lG-a-~~v-i~~~~~~~~~~~~~~~ 257 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHS--AGAKRIIAVDLNPDKFEKAKV----FG-A-TDF-VNPNDHSEPISQVLSK 257 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCGGGHHHHHH----TT-C-CEE-ECGGGCSSCHHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCCHHHHHHHHH----hC-C-ceE-EeccccchhHHHHHHH
Confidence 3456889999999999999999999994 577 89999999999888764 46 2 111 1111 11111111
Q ss_pred --CCCcceEEeccccCChhhHHHHHHHHHhhcccC-eEEEEEc
Q 041205 201 --LGEYDCIILAALAGNEEEKAKILGHIRKYMKEG-GVLLVRS 240 (535)
Q Consensus 201 --L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPG-GvLVvRs 240 (535)
.+.+|+||-.... ...+....+.|+|| |++++-.
T Consensus 258 ~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 258 MTNGGVDFSLECVGN------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCCC------HHHHHHHHHHhhcCCcEEEEEc
Confidence 1369999975332 34678889999999 9988743
No 310
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=97.19 E-value=0.00027 Score=71.57 Aligned_cols=106 Identities=17% Similarity=0.181 Sum_probs=71.8
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcc-cc-cccc--CC
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCD-IM-EVKE--KL 201 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GD-A~-el~~--dL 201 (535)
..+.++++||-+|+|++|+.++.+|+. .|+ +|+++|.+++..+.+++ +| . +-|.....| .. .+.. ..
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~--~Ga~~Vi~~~~~~~~~~~a~~----lG-a-~~i~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARL--LGAAVVIVGDLNPARLAHAKA----QG-F-EIADLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHH----TT-C-EEEETTSSSCHHHHHHHHHSS
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHH--CCCCeEEEEcCCHHHHHHHHH----cC-C-cEEccCCcchHHHHHHHHhCC
Confidence 456889999999999999999999994 477 79999999999888764 56 2 211111111 11 1111 11
Q ss_pred CCcceEEeccccC--------C-hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 202 GEYDCIILAALAG--------N-EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 202 ~~FDvVfiaALVg--------m-~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..||+||-..... + .+++...+....+.|++||++++-.
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 3699999643321 1 1234467889999999999998743
No 311
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.16 E-value=0.0017 Score=56.56 Aligned_cols=96 Identities=11% Similarity=0.028 Sum_probs=67.6
Q ss_pred CCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc--c--CCCCcceE
Q 041205 132 LKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK--E--KLGEYDCI 207 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~--~--dL~~FDvV 207 (535)
..+|+-+|+|.+|......... .|..|+++|.|++.++.+++ .| +.++.||+.+.. . ....+|+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~~~~~~~~~~----~g-----~~~i~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETSRTRVDELRE----RG-----VRAVLGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHH----TT-----CEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHH----cC-----CCEEECCCCCHHHHHhcCcccCCEE
Confidence 4789999999888776655442 57899999999999877653 45 467889986521 1 23468999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
++...- ......+-...+.+.|+..++.|..
T Consensus 76 i~~~~~---~~~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 76 ILTIPN---GYEAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp EECCSC---HHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred EEECCC---hHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 875333 2333334456677889999888764
No 312
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=97.14 E-value=0.00042 Score=69.59 Aligned_cols=100 Identities=18% Similarity=0.123 Sum_probs=69.9
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc----cccccccC
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC----DIMEVKEK 200 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G----DA~el~~d 200 (535)
...+.++++||-+|+|++|..++.+|+. .|+ +|+++|.+++..+.+++ +| . +. .+-.. |..+....
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~~Vi~~~~~~~~~~~~~~----lG-a-~~-vi~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKA--AGAARIIGVDINKDKFAKAKE----VG-A-TE-CVNPQDYKKPIQEVLTE 256 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCGGGHHHHHH----TT-C-SE-EECGGGCSSCHHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHHH----hC-C-ce-EecccccchhHHHHHHH
Confidence 3466889999999999999999999994 577 89999999999888764 46 2 11 11111 11111111
Q ss_pred --CCCcceEEeccccCChhhHHHHHHHHHhhcccC-eEEEEEc
Q 041205 201 --LGEYDCIILAALAGNEEEKAKILGHIRKYMKEG-GVLLVRS 240 (535)
Q Consensus 201 --L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPG-GvLVvRs 240 (535)
.+.||+||-.... ...+....+.|++| |++++-.
T Consensus 257 ~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 257 MSNGGVDFSFEVIGR------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HTTSCBSEEEECSCC------HHHHHHHHHHBCTTTCEEEECS
T ss_pred HhCCCCcEEEECCCC------HHHHHHHHHHhhcCCcEEEEec
Confidence 1369999865332 34678888999999 9988743
No 313
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=97.11 E-value=0.00069 Score=66.79 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=71.1
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc---CCCC
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE---KLGE 203 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~---dL~~ 203 (535)
.++.++++||-+|+|++|..++.+|+ ...|++|+++|.+++..+.+++ +| ...-+.....|..+... .-.+
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~-~~~g~~Vi~~~~~~~r~~~~~~----~G-a~~~i~~~~~~~~~~v~~~t~g~g 232 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAK-NVFGAKVIAVDINQDKLNLAKK----IG-ADVTINSGDVNPVDEIKKITGGLG 232 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHH-HTSCCEEEEEESCHHHHHHHHH----TT-CSEEEEC-CCCHHHHHHHHTTSSC
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHH-HhCCCEEEEEECcHHHhhhhhh----cC-CeEEEeCCCCCHHHHhhhhcCCCC
Confidence 35688999999999999999999888 4668999999999998777664 45 22223332333322111 1134
Q ss_pred cceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 204 YDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 204 FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|+++.++.- ...+....+.+++||.+++-.
T Consensus 233 ~d~~~~~~~~------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 233 VQSAIVCAVA------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEEEECCSC------HHHHHHHHHTEEEEEEEEECC
T ss_pred ceEEEEeccC------cchhheeheeecCCceEEEEe
Confidence 7888876443 456788888999999998754
No 314
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=97.11 E-value=0.00055 Score=68.81 Aligned_cols=99 Identities=14% Similarity=0.127 Sum_probs=70.3
Q ss_pred HhhCCCCCCEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc---ccccccc-
Q 041205 125 ENTGVAQLKKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC---DIMEVKE- 199 (535)
Q Consensus 125 ~~~~l~~pkRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G---DA~el~~- 199 (535)
....+.++++||-+| +|++|..++.+|+. .|++|+++|.+++..+.+++ +| . + . ++.. |..+...
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~--~Ga~Vi~~~~~~~~~~~~~~----~G-a-~-~-~~~~~~~~~~~~~~~ 226 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKK--AKCHVIGTCSSDEKSAFLKS----LG-C-D-R-PINYKTEPVGTVLKQ 226 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----TT-C-S-E-EEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHH----cC-C-c-E-EEecCChhHHHHHHH
Confidence 334678899999999 89999999999994 58999999999998887765 46 2 1 1 1111 1111111
Q ss_pred -CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 -KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 -dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+|+||-.+ | . ..++.+.+.|++||++++-.
T Consensus 227 ~~~~g~D~vid~~--g---~--~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 227 EYPEGVDVVYESV--G---G--AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp HCTTCEEEEEECS--C---T--HHHHHHHHHEEEEEEEEECC
T ss_pred hcCCCCCEEEECC--C---H--HHHHHHHHHHhcCCEEEEEe
Confidence 113699998653 3 1 46788899999999998754
No 315
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=97.10 E-value=0.0004 Score=69.55 Aligned_cols=100 Identities=18% Similarity=0.131 Sum_probs=70.1
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc----cccccccC
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC----DIMEVKEK 200 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G----DA~el~~d 200 (535)
...+.++++||-+|+|++|..++.+|+. .|+ +|+++|.+++..+.+++ +| . +. .+-.. |..+....
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~avqla~~--~Ga~~Vi~~~~~~~~~~~~~~----lG-a-~~-vi~~~~~~~~~~~~v~~ 255 (373)
T 2fzw_A 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKV--AGASRIIGVDINKDKFARAKE----FG-A-TE-CINPQDFSKPIQEVLIE 255 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECSCGGGHHHHHH----HT-C-SE-EECGGGCSSCHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHHH----cC-C-ce-EeccccccccHHHHHHH
Confidence 3456889999999999999999999994 477 89999999999888775 45 2 11 11111 11111111
Q ss_pred --CCCcceEEeccccCChhhHHHHHHHHHhhcccC-eEEEEEc
Q 041205 201 --LGEYDCIILAALAGNEEEKAKILGHIRKYMKEG-GVLLVRS 240 (535)
Q Consensus 201 --L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPG-GvLVvRs 240 (535)
.+.||+||-.... ...+....+.|+|| |++++-.
T Consensus 256 ~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 256 MTDGGVDYSFECIGN------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCCc------HHHHHHHHHhhccCCcEEEEEe
Confidence 1369999865432 34678889999999 9998753
No 316
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=97.06 E-value=0.00032 Score=70.99 Aligned_cols=98 Identities=18% Similarity=0.157 Sum_probs=69.3
Q ss_pred hC-CCCCCEEEEEccCCChhhHHHHHhhcCCC-cEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc------cccc-c
Q 041205 127 TG-VAQLKKVAFVGSGPMPLTSIILASQHMKS-THFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC------DIME-V 197 (535)
Q Consensus 127 ~~-l~~pkRVLeIGSGplPlTAI~LAk~~l~G-a~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G------DA~e-l 197 (535)
.. +.++++||-+|+|++|..++.+|+. .| ++|+++|.+++..+.+++ +| . + .++.. |..+ +
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~~~~----lG-a-~--~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARS--LGAENVIVIAGSPNRLKLAEE----IG-A-D--LTLNRRETSVEERRKAI 259 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHH--TTBSEEEEEESCHHHHHHHHH----TT-C-S--EEEETTTSCHHHHHHHH
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHH--cCCceEEEEcCCHHHHHHHHH----cC-C-c--EEEeccccCcchHHHHH
Confidence 35 6789999999999999999999994 57 599999999998887764 56 2 1 12221 1111 1
Q ss_pred cc--CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 198 KE--KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 198 ~~--dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.. .-..||+||-.... ...+....+.|+|||+++.-.
T Consensus 260 ~~~~~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 260 MDITHGRGADFILEATGD------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp HHHTTTSCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECC
T ss_pred HHHhCCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 11 11259999965433 235778888999999998753
No 317
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=97.06 E-value=0.00042 Score=68.96 Aligned_cols=94 Identities=7% Similarity=0.060 Sum_probs=66.6
Q ss_pred CCCEEEEE-ccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEE-cccccccc--CCCCcce
Q 041205 131 QLKKVAFV-GSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLT-CDIMEVKE--KLGEYDC 206 (535)
Q Consensus 131 ~pkRVLeI-GSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~-GDA~el~~--dL~~FDv 206 (535)
++++||-+ |+|++|..++.+|+. .|++|+++|.+++..+.+++ +| . +.+ +-. .|..+... ....||+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~----lG-a-~~v-i~~~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKA--YGLRVITTASRNETIEWTKK----MG-A-DIV-LNHKESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH--TTCEEEEECCSHHHHHHHHH----HT-C-SEE-ECTTSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHh----cC-C-cEE-EECCccHHHHHHHhCCCCccE
Confidence 79999999 799999999999993 68999999999999888876 35 1 111 100 11111111 1236999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
||-... -...+..+.+.|+|||+++.-
T Consensus 221 v~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 221 VFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred EEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 986432 345678888999999999763
No 318
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.02 E-value=0.00065 Score=70.30 Aligned_cols=79 Identities=22% Similarity=0.137 Sum_probs=59.1
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc---CC--C
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE---KL--G 202 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~---dL--~ 202 (535)
.+.++..++|..+|.+|-|..++ +++.++++|+|+|+|++|++.|+++ . .++++|++++..++.. .. .
T Consensus 54 ~i~pggiyVD~TlG~GGHS~~iL-~~lg~~GrVig~D~Dp~Al~~A~rL----~--~~Rv~lv~~nF~~l~~~L~~~g~~ 126 (347)
T 3tka_A 54 NIRPDGIYIDGTFGRGGHSRLIL-SQLGEEGRLLAIDRDPQAIAVAKTI----D--DPRFSIIHGPFSALGEYVAERDLI 126 (347)
T ss_dssp CCCTTCEEEESCCTTSHHHHHHH-TTCCTTCEEEEEESCHHHHHHHTTC----C--CTTEEEEESCGGGHHHHHHHTTCT
T ss_pred CCCCCCEEEEeCcCCCHHHHHHH-HhCCCCCEEEEEECCHHHHHHHHhh----c--CCcEEEEeCCHHHHHHHHHhcCCC
Confidence 45789999999999888886655 4355789999999999999999532 2 2689999998776532 11 1
Q ss_pred -CcceEEecccc
Q 041205 203 -EYDCIILAALA 213 (535)
Q Consensus 203 -~FDvVfiaALV 213 (535)
.+|.|+++-.|
T Consensus 127 ~~vDgILfDLGV 138 (347)
T 3tka_A 127 GKIDGILLDLGV 138 (347)
T ss_dssp TCEEEEEEECSC
T ss_pred CcccEEEECCcc
Confidence 47777776555
No 319
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.99 E-value=0.0019 Score=63.61 Aligned_cols=48 Identities=15% Similarity=-0.044 Sum_probs=42.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcC
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDD 181 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG 181 (535)
.+++.|||+|||+ |.|++..++ .|.+++|||+++++++.|++.++...
T Consensus 234 ~~~~~vlD~f~Gs-Gt~~~~a~~---~g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 234 FVGDVVLDPFAGT-GTTLIAAAR---WGRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp CTTCEEEETTCTT-THHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEECCCCC-CHHHHHHHH---cCCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 6789999999995 888888777 68899999999999999999988764
No 320
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.98 E-value=0.00061 Score=69.44 Aligned_cols=101 Identities=13% Similarity=0.171 Sum_probs=66.5
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc---CCCC
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE---KLGE 203 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~---dL~~ 203 (535)
.+.++++||-+|+|++|+.++.+|+. .|+ +|+++|.+++..+.++++ | ...-+.....|..+... .-.+
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~~~~l----G-a~~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKH--AGASKVILSEPSEVRRNLAKEL----G-ADHVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCHHHHHHHHHH----T-CSEEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHc----C-CCEEEcCCCCCHHHHHHHHhCCCC
Confidence 46889999999999999999999994 577 999999999999888754 5 11101100111111111 1135
Q ss_pred cceEEeccccCChhhHHHHHHHHHhhc----ccCeEEEEEc
Q 041205 204 YDCIILAALAGNEEEKAKILGHIRKYM----KEGGVLLVRS 240 (535)
Q Consensus 204 FDvVfiaALVgm~edK~~VL~eL~rvL----KPGGvLVvRs 240 (535)
+|+||-.... ....+..+.+.| ++||++++-.
T Consensus 283 ~D~vid~~g~-----~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 283 AKLFLEATGV-----PQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CSEEEECSSC-----HHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCEEEECCCC-----cHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 9999964332 223444454455 9999998854
No 321
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.97 E-value=0.00041 Score=68.42 Aligned_cols=98 Identities=14% Similarity=0.042 Sum_probs=69.0
Q ss_pred hCCCCCCEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEE--cccccccc---C
Q 041205 127 TGVAQLKKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLT--CDIMEVKE---K 200 (535)
Q Consensus 127 ~~l~~pkRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~--GDA~el~~---d 200 (535)
..+.++++||-+| +|++|..++.+|+. .|++|+++|.+++..+.+++ +| . ...+-. .|..+... .
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----~g-a--~~~~~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKM--KGAHTIAVASTDEKLKIAKE----YG-A--EYLINASKEDILRQVLKFTN 214 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----TT-C--SEEEETTTSCHHHHHHHHTT
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cC-C--cEEEeCCCchHHHHHHHHhC
Confidence 4568899999999 89999999999994 68999999999998887765 45 2 111211 11111111 1
Q ss_pred CCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 201 LGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 201 L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
...||+||-.+.. ..++...+.|+|||+++.-.
T Consensus 215 ~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 215 GKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp TSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECC
T ss_pred CCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEc
Confidence 2359999865332 35778888999999998854
No 322
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.96 E-value=0.00025 Score=71.13 Aligned_cols=99 Identities=15% Similarity=0.031 Sum_probs=70.2
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc------c
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK------E 199 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~------~ 199 (535)
...+.++++||-+|+|++|+.++.+|+. .|++|+++|.+++..+.+++ +| . + .++..+..++. .
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~----lG-a-~--~vi~~~~~~~~~~v~~~~ 253 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKA--TGAEVIVTSSSREKLDRAFA----LG-A-D--HGINRLEEDWVERVYALT 253 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHH----HT-C-S--EEEETTTSCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEecCchhHHHHHH----cC-C-C--EEEcCCcccHHHHHHHHh
Confidence 3457899999999999999999999994 58999999999998888765 45 2 1 11222211111 1
Q ss_pred CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 200 KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
....||+||-.+. + ..+....+.|+|||++++-..
T Consensus 254 ~g~g~D~vid~~g-~------~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 254 GDRGADHILEIAG-G------AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp TTCCEEEEEEETT-S------SCHHHHHHHEEEEEEEEEECC
T ss_pred CCCCceEEEECCC-h------HHHHHHHHHhhcCCEEEEEec
Confidence 1236999986533 2 246777889999999988653
No 323
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.96 E-value=0.0011 Score=65.34 Aligned_cols=102 Identities=16% Similarity=0.116 Sum_probs=70.4
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc---ccCCCC
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV---KEKLGE 203 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el---~~dL~~ 203 (535)
..+.++++||-+|+|++|..++.+|+. .....|+++|.+++..++|++ +| ...-+.....|..+. ..+...
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~-~G~~~vi~~~~~~~k~~~a~~----lG-a~~~i~~~~~~~~~~~~~~~~~~g 229 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVA-LGAKSVTAIDISSEKLALAKS----FG-AMQTFNSSEMSAPQMQSVLRELRF 229 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESCHHHHHHHHH----TT-CSEEEETTTSCHHHHHHHHGGGCS
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHH-cCCcEEEEEechHHHHHHHHH----cC-CeEEEeCCCCCHHHHHHhhcccCC
Confidence 456899999999999999999999994 433567899999998887765 56 221122111222111 123346
Q ss_pred cceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 204 YDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 204 FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|+||-.... ...++...+.+++||.+++-.
T Consensus 230 ~d~v~d~~G~------~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 230 NQLILETAGV------PQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp SEEEEECSCS------HHHHHHHHHHCCTTCEEEECC
T ss_pred cccccccccc------cchhhhhhheecCCeEEEEEe
Confidence 8988865433 456788889999999998854
No 324
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.94 E-value=0.00055 Score=74.64 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=83.8
Q ss_pred ccchhhHHhHHHHHHHHHH------hh-CCCCCCEEEEEccCCChhhHHHHHhhcC---------C--CcEEEEEeCChh
Q 041205 107 PYYENYVKLAKLEYGALIE------NT-GVAQLKKVAFVGSGPMPLTSIILASQHM---------K--STHFDNIDIDET 168 (535)
Q Consensus 107 pYy~NYv~LirlE~~lL~~------~~-~l~~pkRVLeIGSGplPlTAI~LAk~~l---------~--Ga~VtGIDIDpe 168 (535)
.||.+.-.+.+.++--+.. .. .-.++-+|+|+|-| .|+..+.+.+... + -.+|+.+|..|-
T Consensus 27 ~y~s~~~~~~e~~~~f~~~~~l~~~~~~~~~~~~~i~e~gfG-~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~ 105 (689)
T 3pvc_A 27 IYFSNEDGLEETHHVFLKGNGFPARFASHPQQSCIFAETGFG-TGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPL 105 (689)
T ss_dssp --CCSTTSHHHHHHHTTTTTTTTHHHHHCCSSEEEEEEECCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCC
T ss_pred cccCCcCHHHhhHhhccccCCHHHHHhhCCCCceEEEEecCc-hHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCC
Confidence 5666666665444321111 01 01356799999999 6999888766310 1 167999999553
Q ss_pred HHHHHH--------------HHHhhcCC---------cCC---CeEEEEccccccccCC-----CCcceEEeccccCChh
Q 041205 169 ANNLAR--------------RIVSSDDE---------IEK---RMKFLTCDIMEVKEKL-----GEYDCIILAALAGNEE 217 (535)
Q Consensus 169 AIelAR--------------~li~~lG~---------Ls~---rI~Fi~GDA~el~~dL-----~~FDvVfiaALVgm~e 217 (535)
..+..+ ++++.... +.+ .++++.||+.+....+ ..||++|+|... +
T Consensus 106 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~---p 182 (689)
T 3pvc_A 106 HVADLASAHARWPELASFAEQLRAQWPLPLAGCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFA---P 182 (689)
T ss_dssp CHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSC---C
T ss_pred CHHHHHHHHHhCcchhHHHHHHHHhCcccCCCceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCC---C
Confidence 332222 33333210 112 5788999998877655 459999999776 6
Q ss_pred hH------HHHHHHHHhhcccCeEEEEEcc
Q 041205 218 EK------AKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 218 dK------~~VL~eL~rvLKPGGvLVvRsa 241 (535)
.| ..+|..+.++++|||.+...+.
T Consensus 183 ~~np~~w~~~~~~~l~~~~~~g~~~~t~~~ 212 (689)
T 3pvc_A 183 AKNPDMWNEQLFNAMARMTRPGGTFSTFTA 212 (689)
T ss_dssp --CCTTCSHHHHHHHHHHEEEEEEEEESCC
T ss_pred CCChhhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 77 8999999999999999988664
No 325
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.94 E-value=0.00044 Score=68.77 Aligned_cols=97 Identities=16% Similarity=0.158 Sum_probs=68.7
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEE---cccccccc---
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLT---CDIMEVKE--- 199 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~---GDA~el~~--- 199 (535)
..+ ++++||-+|+|++|..++.+|+. .|+ +|+++|.+++..+.+++ +| . +. ++. .|..+...
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~--~Ga~~Vi~~~~~~~~~~~~~~----~G-a-~~--~~~~~~~~~~~~v~~~~ 232 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKA--SGAYPVIVSEPSDFRRELAKK----VG-A-DY--VINPFEEDVVKEVMDIT 232 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHH--TTCCSEEEECSCHHHHHHHHH----HT-C-SE--EECTTTSCHHHHHHHHT
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHH----hC-C-CE--EECCCCcCHHHHHHHHc
Confidence 356 89999999999999999999994 577 99999999998887765 35 2 11 111 11111111
Q ss_pred CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+|+||-.... ...+....+.|++||+++.-.
T Consensus 233 ~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 233 DGNGVDVFLEFSGA------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TTSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEc
Confidence 11359999975432 356788889999999998754
No 326
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.93 E-value=0.003 Score=56.81 Aligned_cols=95 Identities=16% Similarity=0.127 Sum_probs=63.0
Q ss_pred CCEEEEEccCCChhhHHHHHhhcCC-CcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc--cc---CCCCcc
Q 041205 132 LKKVAFVGSGPMPLTSIILASQHMK-STHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV--KE---KLGEYD 205 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~LAk~~l~-Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el--~~---dL~~FD 205 (535)
+++|+.+|+|.+|......... . |..|+++|.|++.++.++ ..| +.++.||+.+. .. ...++|
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~--~~g~~V~vid~~~~~~~~~~----~~g-----~~~~~gd~~~~~~l~~~~~~~~ad 107 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA--RYGKISLGIEIREEAAQQHR----SEG-----RNVISGDATDPDFWERILDTGHVK 107 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH--HHCSCEEEEESCHHHHHHHH----HTT-----CCEEECCTTCHHHHHTBCSCCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--ccCCeEEEEECCHHHHHHHH----HCC-----CCEEEcCCCCHHHHHhccCCCCCC
Confidence 5799999999888776554442 4 789999999998876654 335 34667877542 11 245799
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|++...- ......+-...+.+.|++.++++.
T Consensus 108 ~vi~~~~~---~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 108 LVLLAMPH---HQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp EEEECCSS---HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EEEEeCCC---hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 99985332 222333334566678888888765
No 327
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.93 E-value=0.0008 Score=67.22 Aligned_cols=99 Identities=13% Similarity=0.091 Sum_probs=67.4
Q ss_pred CCCCC------CEEEEEccCCChhhH-HHHH-hhcCCCcE-EEEEeCChh---HHHHHHHHHhhcCCcCCCeEEEEcccc
Q 041205 128 GVAQL------KKVAFVGSGPMPLTS-IILA-SQHMKSTH-FDNIDIDET---ANNLARRIVSSDDEIEKRMKFLTCDIM 195 (535)
Q Consensus 128 ~l~~p------kRVLeIGSGplPlTA-I~LA-k~~l~Ga~-VtGIDIDpe---AIelAR~li~~lG~Ls~rI~Fi~GDA~ 195 (535)
.+.++ ++||-+|+|++|+.+ +.+| + ..|++ |+++|.+++ ..+.+++ +| . +.+.....|..
T Consensus 163 ~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k--~~Ga~~Vi~~~~~~~~~~~~~~~~~----lG-a-~~v~~~~~~~~ 234 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVD--DKGYENLYCLGRRDRPDPTIDIIEE----LD-A-TYVDSRQTPVE 234 (357)
T ss_dssp HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHC--TTCCCEEEEEECCCSSCHHHHHHHH----TT-C-EEEETTTSCGG
T ss_pred CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHH--HcCCcEEEEEeCCcccHHHHHHHHH----cC-C-cccCCCccCHH
Confidence 34677 999999999999999 9999 7 35776 999999998 8777764 56 2 11111011111
Q ss_pred ccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 196 EVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 196 el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
++....+.||+||-.... ...+....+.|+|||+++.-.
T Consensus 235 ~i~~~~gg~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 235 DVPDVYEQMDFIYEATGF------PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp GHHHHSCCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHhCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEEe
Confidence 111001269999865332 346788889999999998753
No 328
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.92 E-value=0.0002 Score=71.67 Aligned_cols=100 Identities=20% Similarity=0.207 Sum_probs=68.9
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccc-ccccCC-CCc
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIM-EVKEKL-GEY 204 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~-el~~dL-~~F 204 (535)
..+.++++||-+|+|++|+.++.+|+. .|++|+++|.+++..+.+++ +| . + .++..+-. ++.... +.|
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~--~Ga~Vi~~~~~~~~~~~~~~----lG-a-~--~v~~~~~~~~~~~~~~~~~ 244 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKA--MGAETYVISRSSRKREDAMK----MG-A-D--HYIATLEEGDWGEKYFDTF 244 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSSTTHHHHHH----HT-C-S--EEEEGGGTSCHHHHSCSCE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHH----cC-C-C--EEEcCcCchHHHHHhhcCC
Confidence 467889999999999999999999994 58899999999998888775 45 2 1 11211111 111111 479
Q ss_pred ceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 205 DCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 205 DvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|+||-..... ....++...+.|+|||+++.-.
T Consensus 245 D~vid~~g~~----~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 245 DLIVVCASSL----TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEEECCSCS----TTCCTTTGGGGEEEEEEEEECC
T ss_pred CEEEECCCCC----cHHHHHHHHHHhcCCCEEEEec
Confidence 9999654320 0123566778999999998754
No 329
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.91 E-value=0.00096 Score=65.26 Aligned_cols=93 Identities=15% Similarity=0.191 Sum_probs=65.8
Q ss_pred HhhCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCc
Q 041205 125 ENTGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEY 204 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~F 204 (535)
....+.++++||-+|+|++|..++.+|+. .|++|+++| +++..+.+++ +| . + .++ -|..++ ...|
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~--~Ga~Vi~~~-~~~~~~~~~~----lG-a-~--~v~-~d~~~v---~~g~ 200 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNN--AGYVVDLVS-ASLSQALAAK----RG-V-R--HLY-REPSQV---TQKY 200 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHH--HTCEEEEEC-SSCCHHHHHH----HT-E-E--EEE-SSGGGC---CSCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEE-ChhhHHHHHH----cC-C-C--EEE-cCHHHh---CCCc
Confidence 34467899999999999999999999994 588999999 9988888765 56 2 1 112 242222 3469
Q ss_pred ceEEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 205 DCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 205 DvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
|+||-...- . .+....+.|+|||+++.-
T Consensus 201 Dvv~d~~g~------~-~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 201 FAIFDAVNS------Q-NAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEEECC--------------TTGGGEEEEEEEEEE
T ss_pred cEEEECCCc------h-hHHHHHHHhcCCCEEEEE
Confidence 999864322 1 135678899999999876
No 330
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.90 E-value=0.00053 Score=67.57 Aligned_cols=105 Identities=11% Similarity=-0.008 Sum_probs=71.5
Q ss_pred HHHHHhhCCCCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc--ccccc
Q 041205 121 GALIENTGVAQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC--DIMEV 197 (535)
Q Consensus 121 ~lL~~~~~l~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G--DA~el 197 (535)
..+.....+.++++||-+|+ |++|..++.+|+. .|++|+++|.+++..+.+. +++| . ...+-.. |..+.
T Consensus 139 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~---~~~g-~--~~~~~~~~~~~~~~ 210 (336)
T 4b7c_A 139 FALLDVGQPKNGETVVISGAAGAVGSVAGQIARL--KGCRVVGIAGGAEKCRFLV---EELG-F--DGAIDYKNEDLAAG 210 (336)
T ss_dssp HHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHH---HTTC-C--SEEEETTTSCHHHH
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHH---HHcC-C--CEEEECCCHHHHHH
Confidence 34434456789999999998 9999999999984 6899999999998877662 3446 2 1112111 11111
Q ss_pred cc--CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 198 KE--KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 198 ~~--dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.. ..+.+|+||-.+.. ..+....+.|++||++++-.
T Consensus 211 ~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 211 LKRECPKGIDVFFDNVGG-------EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp HHHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred HHHhcCCCceEEEECCCc-------chHHHHHHHHhhCCEEEEEe
Confidence 10 11369999864321 37888999999999998754
No 331
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.89 E-value=0.00044 Score=68.12 Aligned_cols=99 Identities=9% Similarity=-0.045 Sum_probs=69.6
Q ss_pred hhCCCCCCEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc--cccc-ccc--
Q 041205 126 NTGVAQLKKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC--DIME-VKE-- 199 (535)
Q Consensus 126 ~~~l~~pkRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G--DA~e-l~~-- 199 (535)
...+.++++||-+| +|++|..++.+|+. .|++|+++|.+++..+.+++ +| . ...+-.. |..+ +..
T Consensus 135 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----~G-a--~~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 135 TYQVKPGEIILFHAAAGGVGSLACQWAKA--LGAKLIGTVSSPEKAAHAKA----LG-A--WETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHH----HT-C--SEEEETTTSCHHHHHHHHT
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cC-C--CEEEeCCCccHHHHHHHHh
Confidence 34568899999999 89999999999994 58999999999999888875 35 1 1112111 1111 111
Q ss_pred CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+|+||-.+.. ..+....+.|+|||++++-.
T Consensus 206 ~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp TTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECC
T ss_pred CCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEe
Confidence 11369999864322 35778889999999998854
No 332
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.88 E-value=0.0031 Score=63.65 Aligned_cols=101 Identities=19% Similarity=0.177 Sum_probs=69.0
Q ss_pred CCEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHHHh-------hcCCcC---------CCeEEEEccc
Q 041205 132 LKKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRIVS-------SDDEIE---------KRMKFLTCDI 194 (535)
Q Consensus 132 pkRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~-------~lG~Ls---------~rI~Fi~GDA 194 (535)
-++|.+||+|.+|.+ +..+++ .|..|+.+|++++.++.+++.++ ..|.+. .++++. .|.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~---~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~ 81 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFAS---GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNL 81 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCH
T ss_pred CceEEEEeeCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCH
Confidence 468999999998876 444555 57899999999999998876532 234111 135552 333
Q ss_pred cccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 195 MEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 195 ~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.+ ...+.|+|+.+.-- -..-|..++.++.+.++||.+|+..+
T Consensus 82 ~e---av~~aDlVieavpe-~~~~k~~v~~~l~~~~~~~~Ii~s~t 123 (319)
T 2dpo_A 82 AE---AVEGVVHIQECVPE-NLDLKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp HH---HTTTEEEEEECCCS-CHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred HH---HHhcCCEEEEeccC-CHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 22 23578999986322 12458899999999999999776543
No 333
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.84 E-value=0.0033 Score=61.77 Aligned_cols=97 Identities=16% Similarity=0.085 Sum_probs=66.3
Q ss_pred HhhCCCCCCEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccc-cccCCC
Q 041205 125 ENTGVAQLKKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIME-VKEKLG 202 (535)
Q Consensus 125 ~~~~l~~pkRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~e-l~~dL~ 202 (535)
....+.++++||-+| +|++|+.++.+|+. .|++|++++ +++..+.+ +++| ... ++..+-.+ +.....
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~--~Ga~vi~~~-~~~~~~~~----~~lG-a~~---~i~~~~~~~~~~~~~ 214 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQ--KGTTVITTA-SKRNHAFL----KALG-AEQ---CINYHEEDFLLAIST 214 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEE-CHHHHHHH----HHHT-CSE---EEETTTSCHHHHCCS
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHH--cCCEEEEEe-ccchHHHH----HHcC-CCE---EEeCCCcchhhhhcc
Confidence 345678999999997 99999999999994 589999998 44444544 4567 321 22222122 233345
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
.||+||-...- .. +....+.|+|||+++.-
T Consensus 215 g~D~v~d~~g~------~~-~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 215 PVDAVIDLVGG------DV-GIQSIDCLKETGCIVSV 244 (321)
T ss_dssp CEEEEEESSCH------HH-HHHHGGGEEEEEEEEEC
T ss_pred CCCEEEECCCc------HH-HHHHHHhccCCCEEEEe
Confidence 79999864221 22 37888999999999874
No 334
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.84 E-value=0.00076 Score=67.84 Aligned_cols=99 Identities=15% Similarity=0.146 Sum_probs=65.4
Q ss_pred CCCCCEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceE
Q 041205 129 VAQLKKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCI 207 (535)
Q Consensus 129 l~~pkRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvV 207 (535)
+.++++||-+| +|++|..++.+|+. .|++|++++ +++..+.++ ++| ...-+.....|..+......++|+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~--~Ga~Vi~~~-~~~~~~~~~----~lG-a~~v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKA--WDAHVTAVC-SQDASELVR----KLG-ADDVIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEE-CGGGHHHHH----HTT-CSEEEETTSSCHHHHHHTSCCBSEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHh--CCCEEEEEe-ChHHHHHHH----HcC-CCEEEECCchHHHHHHhhcCCCCEE
Confidence 67899999999 89999999999994 588999999 666665554 556 2111111111111111223569999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|-.+.. ....+....+.+++||+++.-.
T Consensus 253 id~~g~-----~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 253 LDNVGG-----STETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EESSCT-----THHHHGGGGBCSSSCCEEEESC
T ss_pred EECCCC-----hhhhhHHHHHhhcCCcEEEEeC
Confidence 865432 1234677788999999998754
No 335
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.83 E-value=0.00074 Score=67.22 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=69.2
Q ss_pred HhhCCCCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc--cccccc-c-
Q 041205 125 ENTGVAQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC--DIMEVK-E- 199 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G--DA~el~-~- 199 (535)
....+.++++||-+|+ |++|..++.+|+. .|++|+++|.+++..+.++++ | . +. ++.. |..+.. .
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~----g-a-~~--v~~~~~~~~~~v~~~ 222 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKG--MGAKVIAVVNRTAATEFVKSV----G-A-DI--VLPLEEGWAKAVREA 222 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHH----T-C-SE--EEESSTTHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhc----C-C-cE--EecCchhHHHHHHHH
Confidence 3346788999999997 9999999999994 589999999999988887763 5 2 11 1111 211111 1
Q ss_pred -CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 -KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 -dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+|+||-.+.. ..+....+.|++||++++-.
T Consensus 223 ~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 223 TGGAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred hCCCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 11259999865432 25778889999999998754
No 336
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.81 E-value=0.00075 Score=67.46 Aligned_cols=101 Identities=15% Similarity=0.104 Sum_probs=69.1
Q ss_pred hhCCCCCCEEEEE-ccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc--CCC
Q 041205 126 NTGVAQLKKVAFV-GSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE--KLG 202 (535)
Q Consensus 126 ~~~l~~pkRVLeI-GSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~--dL~ 202 (535)
...+.++++||-+ |+|++|..++.+|+. .|++|+++|.+++..+.+++ +| ...-+.....|..+... ...
T Consensus 162 ~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----lG-a~~~~~~~~~~~~~~~~~~~~~ 234 (353)
T 4dup_A 162 MAGLTEGESVLIHGGTSGIGTTAIQLARA--FGAEVYATAGSTGKCEACER----LG-AKRGINYRSEDFAAVIKAETGQ 234 (353)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----HT-CSEEEETTTSCHHHHHHHHHSS
T ss_pred hcCCCCCCEEEEEcCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHh----cC-CCEEEeCCchHHHHHHHHHhCC
Confidence 3457889999999 789999999999994 68999999999999888876 35 21111110111111000 023
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.+|+||-.+.. ..+....+.|+|||+++.-.
T Consensus 235 g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 235 GVDIILDMIGA-------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp CEEEEEESCCG-------GGHHHHHHTEEEEEEEEECC
T ss_pred CceEEEECCCH-------HHHHHHHHHhccCCEEEEEE
Confidence 69999865432 15777888999999998754
No 337
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=96.81 E-value=0.00083 Score=67.25 Aligned_cols=99 Identities=15% Similarity=0.154 Sum_probs=67.6
Q ss_pred CCC-CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcce
Q 041205 128 GVA-QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDC 206 (535)
Q Consensus 128 ~l~-~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDv 206 (535)
.+. ++++||-+|+|++|..++.+|+. .|++|+++|.+++..+.++ +++| . +.+ +-..|...+....+.||+
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~--~Ga~Vi~~~~~~~~~~~~~---~~lG-a-~~v-i~~~~~~~~~~~~~g~D~ 247 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKA--MGHHVTVISSSNKKREEAL---QDLG-A-DDY-VIGSDQAKMSELADSLDY 247 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSTTHHHHHH---TTSC-C-SCE-EETTCHHHHHHSTTTEEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEeCChHHHHHHH---HHcC-C-cee-eccccHHHHHHhcCCCCE
Confidence 456 89999999999999999999994 5789999999998877665 2456 2 222 211221111111246999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
||-..... ..++...+.|+|||+++.-.
T Consensus 248 vid~~g~~------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 248 VIDTVPVH------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EEECCCSC------CCSHHHHTTEEEEEEEEECS
T ss_pred EEECCCCh------HHHHHHHHHhccCCEEEEeC
Confidence 98654321 23556678999999998753
No 338
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.77 E-value=0.0058 Score=63.39 Aligned_cols=109 Identities=14% Similarity=-0.044 Sum_probs=68.1
Q ss_pred CCCEEEEEccCCChhhHHHHHh-------hc------CCCcEEEEEeCCh-hHHHHHHHHHhhc----------CCcCCC
Q 041205 131 QLKKVAFVGSGPMPLTSIILAS-------QH------MKSTHFDNIDIDE-TANNLARRIVSSD----------DEIEKR 186 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk-------~~------l~Ga~VtGIDIDp-eAIelAR~li~~l----------G~Ls~r 186 (535)
.+.+|+|+|||.+|.|.+.+.. +. .|..+|.--|+-. +.+.+-+.+-... | ...+
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~-~~~~ 130 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAA-DGNR 130 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC----CCCB
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccc-cCCC
Confidence 3699999999998888766321 11 2567777777654 3333443332110 0 0112
Q ss_pred eEEEEccccc---cccCCCCcceEEeccccCCh---h-----------------------------------hHHHHHHH
Q 041205 187 MKFLTCDIME---VKEKLGEYDCIILAALAGNE---E-----------------------------------EKAKILGH 225 (535)
Q Consensus 187 I~Fi~GDA~e---l~~dL~~FDvVfiaALVgm~---e-----------------------------------dK~~VL~e 225 (535)
--|+.|.... -+++.+.||+||..+.+|+. + |-..+|+.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2355555543 23455779999988887762 2 33457889
Q ss_pred HHhhcccCeEEEEEc
Q 041205 226 IRKYMKEGGVLLVRS 240 (535)
Q Consensus 226 L~rvLKPGGvLVvRs 240 (535)
.++.|+|||++++-.
T Consensus 211 ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHHhCCCCEEEEEE
Confidence 999999999998854
No 339
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.75 E-value=0.0071 Score=59.09 Aligned_cols=100 Identities=16% Similarity=0.213 Sum_probs=66.9
Q ss_pred CCEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHHHh-------hcCCcC-------------CCeEEE
Q 041205 132 LKKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRIVS-------SDDEIE-------------KRMKFL 190 (535)
Q Consensus 132 pkRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~-------~lG~Ls-------------~rI~Fi 190 (535)
-++|..||+|.+|.+ +..+++ .|..|+.+|++++.++.+++.+. +.|.+. .++++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~---~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~- 90 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA---TGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT- 90 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-
Confidence 368999999998874 444555 57899999999999988765432 123111 13444
Q ss_pred EccccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 191 TCDIMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 191 ~GDA~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
..|.. ....+.|+|+.+- .....-|..++.++.+.++||.+|+..
T Consensus 91 ~~~~~---~~~~~aD~Vi~av-p~~~~~~~~v~~~l~~~~~~~~iv~s~ 135 (302)
T 1f0y_A 91 STDAA---SVVHSTDLVVEAI-VENLKVKNELFKRLDKFAAEHTIFASN 135 (302)
T ss_dssp ESCHH---HHTTSCSEEEECC-CSCHHHHHHHHHHHTTTSCTTCEEEEC
T ss_pred ecCHH---HhhcCCCEEEEcC-cCcHHHHHHHHHHHHhhCCCCeEEEEC
Confidence 23332 1345789999863 211234788999999999999877543
No 340
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.75 E-value=0.00083 Score=65.33 Aligned_cols=94 Identities=14% Similarity=0.068 Sum_probs=67.3
Q ss_pred CCCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccc-cccccCCCCcce
Q 041205 129 VAQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDI-MEVKEKLGEYDC 206 (535)
Q Consensus 129 l~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA-~el~~dL~~FDv 206 (535)
+.++++||-+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ +| . +. ++..+- .++.....+||+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----~g-a-~~--~~~~~~~~~~~~~~~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARA--MGLRVLAAASRPEKLALPLA----LG-A-EE--AATYAEVPERAKAWGGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHH--TTCEEEEEESSGGGSHHHHH----TT-C-SE--EEEGGGHHHHHHHTTSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHh----cC-C-CE--EEECCcchhHHHHhcCceE
Confidence 678999999997 9999999999984 58899999999998887754 56 2 21 122111 112222357999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
||- + | . ..+....+.|+|||+++.-.
T Consensus 193 vid-~--g---~--~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 193 VLE-V--R---G--KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEE-C--S---C--TTHHHHHTTEEEEEEEEEC-
T ss_pred EEE-C--C---H--HHHHHHHHhhccCCEEEEEe
Confidence 987 3 3 1 35788889999999988743
No 341
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.74 E-value=0.00079 Score=68.97 Aligned_cols=103 Identities=17% Similarity=0.148 Sum_probs=66.9
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
-++++|+.||+|++|..+..+++. .|++|+++|.+++..+.+++. .| ..+.....+..++...+..+|+|+.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~--~Ga~V~~~d~~~~~l~~~~~~---~g---~~~~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANG--MGATVTVLDINIDKLRQLDAE---FC---GRIHTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHH---TT---TSSEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHHh---cC---CeeEeccCCHHHHHHHHcCCCEEEE
Confidence 468999999999999999988884 678999999999988776643 34 1222221121122222246899998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.......+.+.-+.+...+.|+|||+|+--.
T Consensus 238 ~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 238 AVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 6554211111112456677899999887644
No 342
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.74 E-value=0.00039 Score=68.96 Aligned_cols=100 Identities=17% Similarity=0.175 Sum_probs=68.9
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc--CCC
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE--KLG 202 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~--dL~ 202 (535)
...+ ++++||-+|+|++|..++.+|+. .|+ +|+++|.+++..+.++++ ...- +. ....|..+... ...
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~--~Ga~~Vi~~~~~~~~~~~~~~l-a~~v-~~----~~~~~~~~~~~~~~~~ 230 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRA--SGAGPILVSDPNPYRLAFARPY-ADRL-VN----PLEEDLLEVVRRVTGS 230 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHH--TTCCSEEEECSCHHHHGGGTTT-CSEE-EC----TTTSCHHHHHHHHHSS
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHh-HHhc-cC----cCccCHHHHHHHhcCC
Confidence 3456 89999999999999999999994 578 899999999988887765 2111 00 00011111110 023
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.||+||-.... ...++...+.|++||+++.-.
T Consensus 231 g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 231 GVEVLLEFSGN------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp CEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 69999865332 346788889999999988753
No 343
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.73 E-value=0.001 Score=66.04 Aligned_cols=98 Identities=17% Similarity=0.149 Sum_probs=68.2
Q ss_pred CCCCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc---cccccccC--C
Q 041205 128 GVAQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC---DIMEVKEK--L 201 (535)
Q Consensus 128 ~l~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G---DA~el~~d--L 201 (535)
.+.++++||-+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ +| . ...+-.. +..+.... .
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~--~Ga~V~~~~~~~~~~~~~~~----~g-~--~~~~d~~~~~~~~~~~~~~~~ 236 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKA--MGYRVLGIDGGEGKEELFRS----IG-G--EVFIDFTKEKDIVGAVLKATD 236 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEECSTTHHHHHHH----TT-C--CEEEETTTCSCHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHH--CCCcEEEEcCCHHHHHHHHH----cC-C--ceEEecCccHhHHHHHHHHhC
Confidence 5678999999998 7889999998884 58899999999998877664 45 2 1111111 11111110 0
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+.+|+||..+.. ...++...+.|++||+++.-.
T Consensus 237 ~~~D~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 237 GGAHGVINVSVS------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp SCEEEEEECSSC------HHHHHHHTTSEEEEEEEEECC
T ss_pred CCCCEEEECCCc------HHHHHHHHHHHhcCCEEEEEe
Confidence 269999876433 357888999999999998754
No 344
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.70 E-value=0.0013 Score=64.59 Aligned_cols=100 Identities=17% Similarity=0.143 Sum_probs=68.2
Q ss_pred HhhCCCCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcc---ccccccC
Q 041205 125 ENTGVAQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCD---IMEVKEK 200 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GD---A~el~~d 200 (535)
....+.++++||-+|+ |++|..++.+++. .|++|+++|.+++..+.+++ +| . ...+-..| ..+....
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~--~G~~V~~~~~~~~~~~~~~~----~g-~--~~~~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKL--KGCKVVGAAGSDEKIAYLKQ----IG-F--DAAFNYKTVNSLEEALKK 209 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----TT-C--SEEEETTSCSCHHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHh----cC-C--cEEEecCCHHHHHHHHHH
Confidence 3346688999999997 8899999888884 68999999999988877743 35 2 11121111 1111110
Q ss_pred --CCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 201 --LGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 201 --L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.+.+|+|+..+.. ..+....+.|+|||++++-.
T Consensus 210 ~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 210 ASPDGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred HhCCCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEEe
Confidence 1469999875432 24788889999999998754
No 345
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.65 E-value=0.0015 Score=64.76 Aligned_cols=98 Identities=13% Similarity=0.049 Sum_probs=68.3
Q ss_pred hCCCCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc--cccc-ccc--C
Q 041205 127 TGVAQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC--DIME-VKE--K 200 (535)
Q Consensus 127 ~~l~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G--DA~e-l~~--d 200 (535)
..+.++++||-+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ +| . + ..+-.. |..+ +.. .
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~--~G~~Vi~~~~~~~~~~~~~~----~g-a-~-~~~d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKL--FGARVIATAGSEDKLRRAKA----LG-A-D-ETVNYTHPDWPKEVRRLTG 232 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----HT-C-S-EEEETTSTTHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHh----cC-C-C-EEEcCCcccHHHHHHHHhC
Confidence 35678999999998 9999999999984 58899999999999888764 35 2 1 111111 1111 111 1
Q ss_pred CCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 201 LGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 201 L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
...+|+||-.+. + ..++.+.+.|++||+++.-.
T Consensus 233 ~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 233 GKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp TTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESS
T ss_pred CCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEe
Confidence 136999997544 2 24677788999999998754
No 346
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.65 E-value=0.0038 Score=55.08 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=64.1
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc--cc--CCCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV--KE--KLGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el--~~--dL~~FD 205 (535)
.++++|+-+|+|++|......+.. .|..|+.+|.+++.++.++. ..| +.++.+|..+. .. ...++|
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~~~~~~~~~~---~~g-----~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKNEYAFHRLNS---EFS-----GFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGGGGGGSCT---TCC-----SEEEESCTTSHHHHHTTTGGGCS
T ss_pred cCCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHh---cCC-----CcEEEecCCCHHHHHHcCcccCC
Confidence 567899999999888776655542 57899999999987543221 233 45677776431 11 134699
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|++.... ......+..+.+.+.|...++.+.
T Consensus 87 ~Vi~~~~~---~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 87 MVFAFTND---DSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp EEEECSSC---HHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred EEEEEeCC---cHHHHHHHHHHHHHCCCCeEEEEE
Confidence 99986433 344455555666667777777765
No 347
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.65 E-value=0.00073 Score=66.94 Aligned_cols=100 Identities=12% Similarity=0.014 Sum_probs=67.2
Q ss_pred HhhCCCCCCEEEEEccC-CChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEE--ccccc-ccc-
Q 041205 125 ENTGVAQLKKVAFVGSG-PMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLT--CDIME-VKE- 199 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGSG-plPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~--GDA~e-l~~- 199 (535)
....+.++++||-+|+| ++|..++.+|+. .|++|+++|.+++..+.+++ +| . ...+-. .|..+ +..
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----lg-a--~~~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQI--LNFRLIAVTRNNKHTEELLR----LG-A--AYVIDTSTAPLYETVMEL 208 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESSSTTHHHHHH----HT-C--SEEEETTTSCHHHHHHHH
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHh----CC-C--cEEEeCCcccHHHHHHHH
Confidence 33467899999999987 899999999984 58999999999999888876 35 2 111211 11111 111
Q ss_pred -CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 -KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 -dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....||+||-.+.. .. +....+.|+|||+++.-.
T Consensus 209 ~~~~g~Dvvid~~g~------~~-~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 209 TNGIGADAAIDSIGG------PD-GNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp TTTSCEEEEEESSCH------HH-HHHHHHTEEEEEEEEECC
T ss_pred hCCCCCcEEEECCCC------hh-HHHHHHHhcCCCEEEEEe
Confidence 11369999875332 11 233457999999998854
No 348
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.64 E-value=0.0067 Score=60.61 Aligned_cols=91 Identities=19% Similarity=0.130 Sum_probs=62.8
Q ss_pred CCEEEEEccCCChhhHH-HHHhhcCCCc--EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 132 LKKVAFVGSGPMPLTSI-ILASQHMKST--HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI-~LAk~~l~Ga--~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
.++|..||+|.+|.+-. .+++ .|. +|+++|.+++.++.++ +.| ..+ . ...|..+. ...+.|+||
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~---~G~~~~V~~~dr~~~~~~~a~----~~G-~~~--~-~~~~~~~~--~~~~aDvVi 99 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR---SGFKGKIYGYDINPESISKAV----DLG-IID--E-GTTSIAKV--EDFSPDFVM 99 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH---TTCCSEEEEECSCHHHHHHHH----HTT-SCS--E-EESCTTGG--GGGCCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHh---CCCCCEEEEEECCHHHHHHHH----HCC-Ccc--h-hcCCHHHH--hhccCCEEE
Confidence 37999999999887743 3433 355 8999999999887765 346 211 1 22333220 134689999
Q ss_pred eccccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 209 LAALAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 209 iaALVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
++.-. .....++.++.+.++||.+|+-
T Consensus 100 lavp~---~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 100 LSSPV---RTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp ECSCG---GGHHHHHHHHHHHSCTTCEEEE
T ss_pred EeCCH---HHHHHHHHHHhhccCCCcEEEE
Confidence 97544 4567899999999999887653
No 349
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.63 E-value=0.0021 Score=65.42 Aligned_cols=143 Identities=10% Similarity=0.055 Sum_probs=78.6
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc-cccccccCCCCcceE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC-DIMEVKEKLGEYDCI 207 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G-DA~el~~dL~~FDvV 207 (535)
+.++++|+|+||||+|+|-..+-+ .+-..|+|+|+.......++ .+...| . +.+.+.++ |+..+ ....||+|
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~--~gv~sV~Gvdlg~~~~~~P~-~~~~~~-~-~iv~~~~~~di~~l--~~~~~DlV 151 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQ--KEVMSVKGYTLGIEGHEKPI-HMQTLG-W-NIVKFKDKSNVFTM--PTEPSDTL 151 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCC-CCCBTT-G-GGEEEECSCCTTTS--CCCCCSEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHh--cCCceeeeEEeccccccccc-cccccC-C-ceEEeecCceeeec--CCCCcCEE
Confidence 368999999999999999765532 34457999999754211000 001122 1 22344333 33222 22469999
Q ss_pred Eecccc--CC--hhhH--HHHHHHHHhhcccC-eEEEEEccc--ccccccCCCCcccc-CCcEEEEEEcCCC--cceeee
Q 041205 208 ILAALA--GN--EEEK--AKILGHIRKYMKEG-GVLLVRSAK--GARAFLYPVVEHEL-FDFKVLSIFHPTN--DVINSV 275 (535)
Q Consensus 208 fiaALV--gm--~edK--~~VL~eL~rvLKPG-GvLVvRsa~--GlR~fLYP~Vdpdl-~GFeil~v~hP~~--eVINSV 275 (535)
+.|..- |. .... ..+|+-+.++|+|| |.|++.-.. |-.. ..+-..+ .-|..+.+..|.. +-.-.+
T Consensus 152 lsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~---~~ll~~lk~~F~~V~~~KPaSR~~S~E~Y 228 (300)
T 3eld_A 152 LCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDV---IEKLERLQLRFGGGIVRVPFSRNSTHEMY 228 (300)
T ss_dssp EECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHH---HHHHHHHHHHHCCEEECCTTSCTTCCCEE
T ss_pred eecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccH---HHHHHHHHHhCCcEEEEeCCCCCCChHHe
Confidence 987433 32 1221 34577778999999 999997654 3100 0000011 3466666777822 222336
Q ss_pred EEEecC
Q 041205 276 VLLQLP 281 (535)
Q Consensus 276 VvARK~ 281 (535)
++.+..
T Consensus 229 ~V~~~r 234 (300)
T 3eld_A 229 YISGAR 234 (300)
T ss_dssp EESSCC
T ss_pred eeccCC
Confidence 666653
No 350
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.63 E-value=0.0017 Score=65.27 Aligned_cols=99 Identities=18% Similarity=0.189 Sum_probs=66.9
Q ss_pred CCC-CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcce
Q 041205 128 GVA-QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDC 206 (535)
Q Consensus 128 ~l~-~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDv 206 (535)
++. ++++||-+|+|++|..++.+|+. .|++|+++|.+++..+.+++ ++| . + ..+-..+...+....+.+|+
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~--~Ga~Vi~~~~~~~~~~~~~~---~lG-a-~-~v~~~~~~~~~~~~~~~~D~ 254 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKA--FGSKVTVISTSPSKKEEALK---NFG-A-D-SFLVSRDQEQMQAAAGTLDG 254 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGGGHHHHHH---TSC-C-S-EEEETTCHHHHHHTTTCEEE
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH---hcC-C-c-eEEeccCHHHHHHhhCCCCE
Confidence 456 89999999999999999999994 58899999999988776552 456 2 1 11211121111111246999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
||-..... ..++...+.|++||+++.-.
T Consensus 255 vid~~g~~------~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 255 IIDTVSAV------HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEECCSSC------CCSHHHHHHEEEEEEEEECC
T ss_pred EEECCCcH------HHHHHHHHHHhcCCEEEEEc
Confidence 99654331 12446677899999988754
No 351
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.62 E-value=0.0011 Score=65.76 Aligned_cols=100 Identities=16% Similarity=0.194 Sum_probs=69.4
Q ss_pred hCCCCCCEEEEEccC-CChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccc--c-cccCC-
Q 041205 127 TGVAQLKKVAFVGSG-PMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIM--E-VKEKL- 201 (535)
Q Consensus 127 ~~l~~pkRVLeIGSG-plPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~--e-l~~dL- 201 (535)
..+.++++||-+|+| ++|..++.+|+. ..|++|+++|.+++..+.+++ +| . ...+-..|.. + +....
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~-~~Ga~Vi~~~~~~~~~~~~~~----~g-~--~~~~~~~~~~~~~~~~~~~~ 237 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKA-VSGATIIGVDVREEAVEAAKR----AG-A--DYVINASMQDPLAEIRRITE 237 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHH-HTCCEEEEEESSHHHHHHHHH----HT-C--SEEEETTTSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHHH----hC-C--CEEecCCCccHHHHHHHHhc
Confidence 456889999999998 889999999884 238999999999999887765 35 2 1112111110 0 11111
Q ss_pred -CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 202 -GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 202 -~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+.+|+||-.+.. ...++...+.|+|||++++-.
T Consensus 238 ~~~~d~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 238 SKGVDAVIDLNNS------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp TSCEEEEEESCCC------HHHHTTGGGGEEEEEEEEECC
T ss_pred CCCceEEEECCCC------HHHHHHHHHHHhcCCEEEEEC
Confidence 369999875433 346788899999999998743
No 352
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=96.58 E-value=0.0018 Score=64.37 Aligned_cols=98 Identities=12% Similarity=0.076 Sum_probs=67.8
Q ss_pred hhCCCCCCEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc---cCC
Q 041205 126 NTGVAQLKKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK---EKL 201 (535)
Q Consensus 126 ~~~l~~pkRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~---~dL 201 (535)
...+.++++||-+| +|++|..++.+|+. .|++|+++ .+++..+.+++ +| ... |. ...|..+.. ...
T Consensus 145 ~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~--~Ga~Vi~~-~~~~~~~~~~~----lG-a~~-i~-~~~~~~~~~~~~~~~ 214 (343)
T 3gaz_A 145 RAQVQDGQTVLIQGGGGGVGHVAIQIALA--RGARVFAT-ARGSDLEYVRD----LG-ATP-ID-ASREPEDYAAEHTAG 214 (343)
T ss_dssp TTCCCTTCEEEEETTTSHHHHHHHHHHHH--TTCEEEEE-ECHHHHHHHHH----HT-SEE-EE-TTSCHHHHHHHHHTT
T ss_pred hcCCCCCCEEEEecCCCHHHHHHHHHHHH--CCCEEEEE-eCHHHHHHHHH----cC-CCE-ec-cCCCHHHHHHHHhcC
Confidence 34568899999999 89999999999994 68999999 88888776654 56 221 22 111111111 111
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..||+||-.+ | . ..+....+.|+|||.+++-.
T Consensus 215 ~g~D~vid~~--g---~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 215 QGFDLVYDTL--G---G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp SCEEEEEESS--C---T--HHHHHHHHHEEEEEEEEESC
T ss_pred CCceEEEECC--C---c--HHHHHHHHHHhcCCeEEEEc
Confidence 3699998643 3 1 36788888999999998743
No 353
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.56 E-value=0.021 Score=47.92 Aligned_cols=96 Identities=20% Similarity=0.125 Sum_probs=60.1
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc----cCCCCcce
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK----EKLGEYDC 206 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~----~dL~~FDv 206 (535)
.+++|+.+|+|.+|........ ..|..|+.+|.+++.++..++ ..| +.++.+|..+.. .....+|+
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~--~~g~~v~~~d~~~~~~~~~~~---~~~-----~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLS--EKGHDIVLIDIDKDICKKASA---EID-----ALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHH---HCS-----SEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHH--hCCCeEEEEECCHHHHHHHHH---hcC-----cEEEEcCCCCHHHHHHcCcccCCE
Confidence 3579999999987766544333 257899999999987654332 234 456778765321 12457999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|++.... ......+..+.+.+.++. ++++.
T Consensus 73 vi~~~~~---~~~~~~~~~~~~~~~~~~-ii~~~ 102 (140)
T 1lss_A 73 YIAVTGK---EEVNLMSSLLAKSYGINK-TIARI 102 (140)
T ss_dssp EEECCSC---HHHHHHHHHHHHHTTCCC-EEEEC
T ss_pred EEEeeCC---chHHHHHHHHHHHcCCCE-EEEEe
Confidence 9986433 233445666677788864 44443
No 354
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.55 E-value=0.028 Score=56.55 Aligned_cols=106 Identities=10% Similarity=0.089 Sum_probs=76.4
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCC-cCCCeEEEEccccc-ccc-------CC
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDE-IEKRMKFLTCDIME-VKE-------KL 201 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~-Ls~rI~Fi~GDA~e-l~~-------dL 201 (535)
....|+.+||| ++..+..+.. ..+++|+-|| .|+.++..++++...|. -..+..++.+|..+ +.. +.
T Consensus 102 g~~QvV~LGaG-lDTra~Rl~~--~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~ 177 (310)
T 2uyo_A 102 GIRQFVILASG-LDSRAYRLDW--PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDP 177 (310)
T ss_dssp TCCEEEEETCT-TCCHHHHSCC--CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCT
T ss_pred CCCeEEEeCCC-CCchhhhccC--CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCC
Confidence 45789999999 8888766642 2468999999 79999999999987552 24678899999865 111 11
Q ss_pred CCcceEEeccccC-C-hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 202 GEYDCIILAALAG-N-EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 202 ~~FDvVfiaALVg-m-~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+.--++++.++.+ + .++-..+++.+.....||+.|++..
T Consensus 178 ~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 178 SARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp TSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred CCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 1223444444443 3 5667789999999889999999875
No 355
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.55 E-value=0.0025 Score=62.79 Aligned_cols=101 Identities=15% Similarity=0.056 Sum_probs=69.2
Q ss_pred HhhCCCCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc---cccccccC
Q 041205 125 ENTGVAQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC---DIMEVKEK 200 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G---DA~el~~d 200 (535)
....+.++++||-+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ ++| . ...+-.. |..+....
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~--~G~~V~~~~~~~~~~~~~~~---~~g-~--~~~~d~~~~~~~~~~~~~ 220 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKM--MGCYVVGSAGSKEKVDLLKT---KFG-F--DDAFNYKEESDLTAALKR 220 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH---TSC-C--SEEEETTSCSCSHHHHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH---HcC-C--ceEEecCCHHHHHHHHHH
Confidence 3346788999999996 9999999999984 58999999999988877652 345 2 1112111 11111110
Q ss_pred --CCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 201 --LGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 201 --L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.+.+|+||-.+ | . ..+....+.|+|||++++-.
T Consensus 221 ~~~~~~d~vi~~~--g---~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 221 CFPNGIDIYFENV--G---G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp HCTTCEEEEEESS--C---H--HHHHHHHTTEEEEEEEEECC
T ss_pred HhCCCCcEEEECC--C---H--HHHHHHHHHHhcCCEEEEEc
Confidence 13699998653 2 1 37888899999999998743
No 356
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=96.55 E-value=0.001 Score=66.28 Aligned_cols=104 Identities=7% Similarity=-0.057 Sum_probs=65.6
Q ss_pred hCCCCC-CEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEE---cccccccc--
Q 041205 127 TGVAQL-KKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLT---CDIMEVKE-- 199 (535)
Q Consensus 127 ~~l~~p-kRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~---GDA~el~~-- 199 (535)
..+.++ ++||-+|+ |++|..++.+|+. .|++|+++..+++..+..++.++++| ...-+.... .|..+...
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~--~Ga~vi~~~~~~~~~~~~~~~~~~lG-a~~vi~~~~~~~~~~~~~i~~~ 238 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKL--LNFNSISVIRDRPNLDEVVASLKELG-ATQVITEDQNNSREFGPTIKEW 238 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHH--HTCEEEEEECCCTTHHHHHHHHHHHT-CSEEEEHHHHHCGGGHHHHHHH
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHH--CCCEEEEEecCccccHHHHHHHHhcC-CeEEEecCccchHHHHHHHHHH
Confidence 456788 99999997 9999999999994 58899999877664333334445677 221111110 12111111
Q ss_pred ---CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 ---KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 ---dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....||+||-...- .... ...+.|++||+++.-.
T Consensus 239 t~~~~~g~Dvvid~~G~------~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 239 IKQSGGEAKLALNCVGG------KSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHHHTCCEEEEEESSCH------HHHH-HHHHTSCTTCEEEECC
T ss_pred hhccCCCceEEEECCCc------hhHH-HHHHHhccCCEEEEec
Confidence 12369999864322 2233 6678999999998743
No 357
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.55 E-value=0.0019 Score=63.62 Aligned_cols=99 Identities=14% Similarity=0.039 Sum_probs=68.2
Q ss_pred hhCCCCCCEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc--cccc-cc--c
Q 041205 126 NTGVAQLKKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC--DIME-VK--E 199 (535)
Q Consensus 126 ~~~l~~pkRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G--DA~e-l~--~ 199 (535)
...+.++++||-+| +|++|..++.+|+. .|++|+++|.+++..+.+++ +| . ...+-.. |..+ +. .
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~--~G~~Vi~~~~~~~~~~~~~~----~g-~--~~~~d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARH--LGATVIGTVSTEEKAETARK----LG-C--HHTINYSTQDFAEVVREIT 210 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----HT-C--SEEEETTTSCHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cC-C--CEEEECCCHHHHHHHHHHh
Confidence 34568899999999 59999999999984 58999999999988887765 35 2 1111111 1111 10 0
Q ss_pred CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+|+||-.+.. ..++...+.|+|||+++.-.
T Consensus 211 ~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 211 GGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp TTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECC
T ss_pred CCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEe
Confidence 11359999865321 45778888999999988754
No 358
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.54 E-value=0.02 Score=59.70 Aligned_cols=105 Identities=9% Similarity=-0.092 Sum_probs=70.1
Q ss_pred CCEEEEEccCCChhhHHHHHh------h---------cCCCcEEEEEeCC-----------hhHHHHHHHHHhhcCCcCC
Q 041205 132 LKKVAFVGSGPMPLTSIILAS------Q---------HMKSTHFDNIDID-----------ETANNLARRIVSSDDEIEK 185 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~LAk------~---------~l~Ga~VtGIDID-----------peAIelAR~li~~lG~Ls~ 185 (535)
+.+|+|+|||.+|.|.+.+.. . ..|..+|..-|+- +...+..++ ..| -..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g-~~~ 128 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENG-RKI 128 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTC-CCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hcc-CCC
Confidence 689999999998888776654 0 1355778888887 554443322 233 122
Q ss_pred CeEEEEccccc---cccCCCCcceEEeccccCC---hhhH---------------------H---------------HHH
Q 041205 186 RMKFLTCDIME---VKEKLGEYDCIILAALAGN---EEEK---------------------A---------------KIL 223 (535)
Q Consensus 186 rI~Fi~GDA~e---l~~dL~~FDvVfiaALVgm---~edK---------------------~---------------~VL 223 (535)
+--|+.|.... -+++.+.||+||..+.+|| .++. . .+|
T Consensus 129 ~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL 208 (384)
T 2efj_A 129 GSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFL 208 (384)
T ss_dssp TSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45788887654 3445578999998888876 2200 1 226
Q ss_pred HHHHhhcccCeEEEEEc
Q 041205 224 GHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 224 ~eL~rvLKPGGvLVvRs 240 (535)
+..++.|+|||++++-.
T Consensus 209 ~~Ra~eL~pGG~mvl~~ 225 (384)
T 2efj_A 209 RIHSEELISRGRMLLTF 225 (384)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhccCCeEEEEE
Confidence 77799999999999865
No 359
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.51 E-value=0.0045 Score=61.82 Aligned_cols=104 Identities=13% Similarity=0.147 Sum_probs=70.7
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc-cccccccCCCCcce
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC-DIMEVKEKLGEYDC 206 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G-DA~el~~dL~~FDv 206 (535)
.+.++++|+|+||+|+|.|-.+... ....+|.|+|+-+.--+.- .+++..| . +.|+|.++ |+..++. ..||.
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~--~g~~~V~avdvG~~ghe~P-~~~~s~g-w-n~v~fk~gvDv~~~~~--~~~Dt 147 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGL--KKVTEVRGYTKGGPGHEEP-VPMSTYG-W-NIVKLMSGKDVFYLPP--EKCDT 147 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCC-CCCCCTT-T-TSEEEECSCCGGGCCC--CCCSE
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHh--cCCCEEEEEecCCCCccCc-chhhhcC-c-CceEEEeccceeecCC--ccccE
Confidence 4578999999999999999766544 2335699999976532110 1234566 3 67999999 9865544 56999
Q ss_pred EEeccccC--C-hhhHHH---HHHHHHhhcccCeEEEEE
Q 041205 207 IILAALAG--N-EEEKAK---ILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 207 VfiaALVg--m-~edK~~---VL~eL~rvLKPGGvLVvR 239 (535)
|+.|-.=. - .-+..+ +|+-+.+.|++ |-+++.
T Consensus 148 llcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~K 185 (267)
T 3p8z_A 148 LLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIK 185 (267)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEE
T ss_pred EEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEE
Confidence 99874331 1 223333 77777889998 666663
No 360
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.49 E-value=0.00092 Score=69.80 Aligned_cols=100 Identities=14% Similarity=0.238 Sum_probs=67.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc-----------------
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC----------------- 192 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G----------------- 192 (535)
.++.+|+.||.|++|..+..+++. -|++|+++|++++..+.++++ |. +|+..
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~~~~l~~~~~l----Ga-----~~~~l~~~~~~~~gya~~~~~~ 250 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKR--LGAKTTGYDVRPEVAEQVRSV----GA-----QWLDLGIDAAGEGGYARELSEA 250 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHH--HTCEEEEECSSGGGHHHHHHT----TC-----EECCCC-------------CHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHc----CC-----eEEeccccccccccchhhhhHH
Confidence 378999999999999999999884 589999999999988877653 41 22211
Q ss_pred ----cccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 193 ----DIMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 193 ----DA~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+..++...+..+|+|+...++.-...+.-+-+++.+.||||++|+--.
T Consensus 251 ~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 251 ERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 011122233679999986554210111123467888999998776543
No 361
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=96.49 E-value=0.0016 Score=65.14 Aligned_cols=98 Identities=11% Similarity=-0.017 Sum_probs=67.7
Q ss_pred hCCCCCCEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc--cccc-ccc--C
Q 041205 127 TGVAQLKKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC--DIME-VKE--K 200 (535)
Q Consensus 127 ~~l~~pkRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G--DA~e-l~~--d 200 (535)
..+.++++||-+| +|++|..++.+|+. .|++|+++|.+++..+.++++ | . ...+-.. |..+ +.. .
T Consensus 158 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~----g-~--~~~~~~~~~~~~~~~~~~~~ 228 (354)
T 2j8z_A 158 GNVQAGDYVLIHAGLSGVGTAAIQLTRM--AGAIPLVTAGSQKKLQMAEKL----G-A--AAGFNYKKEDFSEATLKFTK 228 (354)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHH----T-C--SEEEETTTSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCccHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHc----C-C--cEEEecCChHHHHHHHHHhc
Confidence 4568899999999 79999999999984 689999999999988887543 5 2 1111111 1111 111 1
Q ss_pred CCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 201 LGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 201 L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
...+|+||-.+.. + .+....+.|++||++++-.
T Consensus 229 ~~~~d~vi~~~G~---~----~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 229 GAGVNLILDCIGG---S----YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp TSCEEEEEESSCG---G----GHHHHHHHEEEEEEEEECC
T ss_pred CCCceEEEECCCc---h----HHHHHHHhccCCCEEEEEe
Confidence 1359999875432 1 4677788999999998754
No 362
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.48 E-value=0.0079 Score=61.57 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=70.4
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCCC-cEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc-cccccccCCCCcc
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMKS-THFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC-DIMEVKEKLGEYD 205 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~G-a~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G-DA~el~~dL~~FD 205 (535)
.+.++.+|+|+||+|+|+|-.+... .| ..|.|+|+-..--+.- .++..+| . +.|.|..+ |+..+.. ..+|
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~---~gv~~V~avdvG~~~he~P-~~~~ql~-w-~lV~~~~~~Dv~~l~~--~~~D 162 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQ---KRVQEVRGYTKGGPGHEEP-QLVQSYG-W-NIVTMKSGVDVFYRPS--ECCD 162 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTC---TTEEEEEEECCCSTTSCCC-CCCCBTT-G-GGEEEECSCCTTSSCC--CCCS
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhh---cCCCEEEEEEcCCCCccCc-chhhhcC-C-cceEEEeccCHhhCCC--CCCC
Confidence 3578899999999999999766544 44 4699999976521000 0123555 3 45899998 8766554 4699
Q ss_pred eEEeccccC--C-hhhHH---HHHHHHHhhcccC-eEEEEE
Q 041205 206 CIILAALAG--N-EEEKA---KILGHIRKYMKEG-GVLLVR 239 (535)
Q Consensus 206 vVfiaALVg--m-~edK~---~VL~eL~rvLKPG-GvLVvR 239 (535)
+|++|-.-. - .-+.. ++|+-+.+.|++| |-+++.
T Consensus 163 ~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~K 203 (321)
T 3lkz_A 163 TLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVK 203 (321)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEE
Confidence 999885431 1 22333 3777778999998 888874
No 363
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.43 E-value=0.0023 Score=64.98 Aligned_cols=102 Identities=19% Similarity=0.262 Sum_probs=66.6
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
++++|+-+|+|++|..++.+++. .|++|+.+|++++..+.+++.... .+..+..+..++.....++|+|+..
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~--~Ga~V~v~dr~~~r~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVG--LGAQVQIFDINVERLSYLETLFGS------RVELLYSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHGG------GSEEEECCHHHHHHHHHTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHHhhCc------eeEeeeCCHHHHHHHHcCCCEEEEC
Confidence 45999999999999999998884 578999999999988877765422 2222222211222223469999976
Q ss_pred cccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 211 ALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 211 ALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
...+......-+.+...+.|+|||+++.-.
T Consensus 238 ~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 238 VLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp CCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 655321111112345667899999887644
No 364
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.40 E-value=0.0014 Score=68.95 Aligned_cols=100 Identities=20% Similarity=0.281 Sum_probs=66.9
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcc-------------c--
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCD-------------I-- 194 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GD-------------A-- 194 (535)
-++.+|+.||+|++|..+..+|+. -|++|+.+|++++..+.++++ |. +|+..+ +
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~~~~l~~~~~~----G~-----~~~~~~~~~~~d~~~~~~ya~e 256 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARR--LGAVVSATDVRPAAKEQVASL----GA-----KFIAVEDEEFKAAETAGGYAKE 256 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSTTHHHHHHHT----TC-----EECCCCC---------------
T ss_pred cCCCEEEEECCcHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHc----CC-----ceeecccccccccccccchhhh
Confidence 368999999999999999999884 589999999999998877653 31 111110 0
Q ss_pred ----------cccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 195 ----------MEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 195 ----------~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..+.......|+|+...++.-...+.-+-+++.+.||||++|+=-.
T Consensus 257 ~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 257 MSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp --CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred cchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 0111122468999986554211111223468888999998876544
No 365
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.38 E-value=0.0031 Score=63.13 Aligned_cols=99 Identities=16% Similarity=0.145 Sum_probs=67.8
Q ss_pred hhCCCCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc--cccc-cc--c
Q 041205 126 NTGVAQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC--DIME-VK--E 199 (535)
Q Consensus 126 ~~~l~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G--DA~e-l~--~ 199 (535)
...+.++++||-+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ +| . ...+-.. |..+ +. .
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----~g-a--~~~~d~~~~~~~~~~~~~~ 235 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARA--YGLKILGTAGTEEGQKIVLQ----NG-A--HEVFNHREVNYIDKIKKYV 235 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----TT-C--SEEEETTSTTHHHHHHHHH
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHH--CCCEEEEEeCChhHHHHHHH----cC-C--CEEEeCCCchHHHHHHHHc
Confidence 345688999999996 9899999999984 68999999999998876654 45 2 1111111 1111 10 1
Q ss_pred CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+|+||-.+.. ..+....+.|+|||+++.-.
T Consensus 236 ~~~~~D~vi~~~G~-------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 236 GEKGIDIIIEMLAN-------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp CTTCEEEEEESCHH-------HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCcEEEEECCCh-------HHHHHHHHhccCCCEEEEEe
Confidence 11369999875332 24678889999999998753
No 366
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.36 E-value=0.0026 Score=64.68 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=65.3
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
-++++|+-+|+|++|..+..++.. .|++|+.+|.+++..+.+++. .| ..+.....+..++......+|+|+.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~--~Ga~V~~~d~~~~~~~~~~~~---~g---~~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALG--MGAQVTILDVNHKRLQYLDDV---FG---GRVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHH---TT---TSEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHHh---cC---ceEEEecCCHHHHHHHHhCCCEEEE
Confidence 356999999999999998888873 688999999999887665532 34 2232222222222222246899987
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.+.........-+.+...+.|+|||+++.-.
T Consensus 236 ~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 236 AVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 6554210011113567788899999887644
No 367
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=96.36 E-value=0.0031 Score=63.17 Aligned_cols=99 Identities=16% Similarity=0.088 Sum_probs=65.9
Q ss_pred hCCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcc-----ccccccCC
Q 041205 127 TGVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCD-----IMEVKEKL 201 (535)
Q Consensus 127 ~~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GD-----A~el~~dL 201 (535)
..+.++++||-+|+|++|+.++.+|+. ..|++|+++|.+++..+.+++ +| . +. .+-..+ +.++. .-
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~-~~Ga~Vi~~~~~~~~~~~~~~----lG-a-~~-vi~~~~~~~~~v~~~~-~g 252 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKV-MTPATVIALDVKEEKLKLAER----LG-A-DH-VVDARRDPVKQVMELT-RG 252 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHH-HCCCEEEEEESSHHHHHHHHH----TT-C-SE-EEETTSCHHHHHHHHT-TT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHH----hC-C-CE-EEeccchHHHHHHHHh-CC
Confidence 566889999999999999999999994 338899999999998887764 56 2 11 111111 11111 11
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..||+||-.... .....+....+. +||+++.-.
T Consensus 253 ~g~Dvvid~~G~----~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 253 RGVNVAMDFVGS----QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp CCEEEEEESSCC----HHHHHHGGGGEE--EEEEEEECC
T ss_pred CCCcEEEECCCC----chHHHHHHHhhc--CCCEEEEEe
Confidence 269999865332 111156666665 999888753
No 368
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.33 E-value=0.0095 Score=58.01 Aligned_cols=102 Identities=14% Similarity=0.203 Sum_probs=68.5
Q ss_pred CCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc-------C-CcC--------CCeEEEEcccc
Q 041205 132 LKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD-------D-EIE--------KRMKFLTCDIM 195 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l-------G-~Ls--------~rI~Fi~GDA~ 195 (535)
-++|..||+|.+|.+-..... ..|.+|+.+|++++.++.+++.+.+. | .+. .++++ ..|..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la--~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTA--FHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHH--hCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 369999999998876433322 25889999999999999888764321 1 011 12333 23332
Q ss_pred ccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 196 EVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 196 el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+ ...+.|+|+.+..- ..+.|..++.++.+.++||.+|+..+
T Consensus 81 ~---~~~~aDlVi~av~~-~~~~~~~v~~~l~~~~~~~~il~s~t 121 (283)
T 4e12_A 81 Q---AVKDADLVIEAVPE-SLDLKRDIYTKLGELAPAKTIFATNS 121 (283)
T ss_dssp H---HTTTCSEEEECCCS-CHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred H---HhccCCEEEEeccC-cHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 2 23578999986322 13478999999999999998876543
No 369
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.32 E-value=0.02 Score=49.10 Aligned_cols=95 Identities=9% Similarity=0.073 Sum_probs=63.3
Q ss_pred CCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc----CCCCcceE
Q 041205 132 LKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE----KLGEYDCI 207 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~----dL~~FDvV 207 (535)
.++|+-+|+|.+|........ ..|..|+++|.|++.++.++. .| +.++.+|+.+... ...++|+|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~--~~g~~V~~id~~~~~~~~~~~----~~-----~~~~~gd~~~~~~l~~~~~~~~d~v 74 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELT--AAGKKVLAVDKSKEKIELLED----EG-----FDAVIADPTDESFYRSLDLEGVSAV 74 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHH--HTTCCEEEEESCHHHHHHHHH----TT-----CEEEECCTTCHHHHHHSCCTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH--HCCCeEEEEECCHHHHHHHHH----CC-----CcEEECCCCCHHHHHhCCcccCCEE
Confidence 468999999987776544433 258899999999998776653 34 4788899875321 23569999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
++...- .+....+....+.+. ...++.+..
T Consensus 75 i~~~~~---~~~n~~~~~~a~~~~-~~~iia~~~ 104 (141)
T 3llv_A 75 LITGSD---DEFNLKILKALRSVS-DVYAIVRVS 104 (141)
T ss_dssp EECCSC---HHHHHHHHHHHHHHC-CCCEEEEES
T ss_pred EEecCC---HHHHHHHHHHHHHhC-CceEEEEEc
Confidence 875432 233444555556666 666766654
No 370
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=96.31 E-value=0.0021 Score=62.87 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=63.8
Q ss_pred EEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC--CCCcceEEec
Q 041205 134 KVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK--LGEYDCIILA 210 (535)
Q Consensus 134 RVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d--L~~FDvVfia 210 (535)
+||-+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ +| . + -.+-..+... ... .+.+|+||-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~--~Ga~Vi~~~~~~~~~~~~~~----lG-a-~-~vi~~~~~~~-~~~~~~~~~d~v~d~ 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHK--LGYQVAAVSGRESTHGYLKS----LG-A-N-RILSRDEFAE-SRPLEKQLWAGAIDT 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHH--TTCCEEEEESCGGGHHHHHH----HT-C-S-EEEEGGGSSC-CCSSCCCCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHh----cC-C-C-EEEecCCHHH-HHhhcCCCccEEEEC
Confidence 4999997 9999999999994 58899999999999888876 45 2 1 1121111111 111 1359988753
Q ss_pred cccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 211 ALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 211 ALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+| . ..+....+.|+|||+++.-.
T Consensus 219 --~g---~--~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 219 --VG---D--KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp --SC---H--HHHHHHHHTEEEEEEEEECC
T ss_pred --CC---c--HHHHHHHHHHhcCCEEEEEe
Confidence 33 1 27899999999999998854
No 371
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.26 E-value=0.0018 Score=63.52 Aligned_cols=98 Identities=9% Similarity=0.025 Sum_probs=67.8
Q ss_pred hCCCCCCEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcc--ccc-ccc--C
Q 041205 127 TGVAQLKKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCD--IME-VKE--K 200 (535)
Q Consensus 127 ~~l~~pkRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GD--A~e-l~~--d 200 (535)
..+.++++||-+| +|++|..++.+|+. .|++|+++|.+++..+.+++ +| . ...+-..| ..+ +.. .
T Consensus 136 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~--~G~~V~~~~~~~~~~~~~~~----~g-~--~~~~~~~~~~~~~~~~~~~~ 206 (327)
T 1qor_A 136 YEIKPDEQFLFHAAAGGVGLIACQWAKA--LGAKLIGTVGTAQKAQSALK----AG-A--WQVINYREEDLVERLKEITG 206 (327)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHH----HT-C--SEEEETTTSCHHHHHHHHTT
T ss_pred hCCCCCCEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHH----cC-C--CEEEECCCccHHHHHHHHhC
Confidence 4567899999999 78899999999884 57899999999998887765 35 2 11121111 111 111 1
Q ss_pred CCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 201 LGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 201 L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
...+|+||..+. ...++.+.+.|++||+++.-.
T Consensus 207 ~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 207 GKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp TCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECC
T ss_pred CCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEe
Confidence 135999987543 235778888999999988754
No 372
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.25 E-value=0.0021 Score=64.90 Aligned_cols=100 Identities=17% Similarity=0.190 Sum_probs=72.3
Q ss_pred EEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc----CCCCcceEEecc
Q 041205 136 AFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE----KLGEYDCIILAA 211 (535)
Q Consensus 136 LeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~----dL~~FDvVfiaA 211 (535)
+|=|||.+|+-++ + .+.+++-+|.++++++.=+++++.. ++++++++|+..... ....||+||+|-
T Consensus 98 lfaGSGaLgiEaL---S---~~d~~vfvE~~~~a~~~L~~Nl~~~----~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 98 YYPGSPYFAINQL---R---SQDRLYLCELHPTEYNFLLKLPHFN----KKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp EEECHHHHHHHHS---C---TTSEEEEECCSHHHHHHHTTSCCTT----SCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred EeCCcHHHHHHHc---C---CCCeEEEEeCCHHHHHHHHHHhCcC----CcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 6777775444432 2 4679999999999999988888652 589999999876443 223599999996
Q ss_pred ccCChhhHHHHHHHHHh--hcccCeEEEEEcccccccccCCCCcc
Q 041205 212 LAGNEEEKAKILGHIRK--YMKEGGVLLVRSAKGARAFLYPVVEH 254 (535)
Q Consensus 212 LVgm~edK~~VL~eL~r--vLKPGGvLVvRsa~GlR~fLYP~Vdp 254 (535)
-.+...+..++++.+.+ .+.|+|++++ +||.++.
T Consensus 168 PYe~k~~~~~vl~~L~~~~~r~~~Gi~v~---------WYPi~~~ 203 (283)
T 2oo3_A 168 SYERKEEYKEIPYAIKNAYSKFSTGLYCV---------WYPVVNK 203 (283)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHCTTSEEEE---------EEEESSH
T ss_pred CCCCCcHHHHHHHHHHHhCccCCCeEEEE---------EEeccch
Confidence 55433577777777765 4678888877 6776543
No 373
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.25 E-value=0.025 Score=58.12 Aligned_cols=143 Identities=18% Similarity=0.179 Sum_probs=87.0
Q ss_pred CCCCCEEEEEcc----CCChhhHHHHHhhcCC-CcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCC
Q 041205 129 VAQLKKVAFVGS----GPMPLTSIILASQHMK-STHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGE 203 (535)
Q Consensus 129 l~~pkRVLeIGS----GplPlTAI~LAk~~l~-Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~ 203 (535)
+..+++||++|+ |.-|.| ..+.+ ..| |+.|+++|+.+-. ... . .|++||..++.. .+.
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS-~VLr~-~~p~g~~VVavDL~~~~---------sda----~-~~IqGD~~~~~~-~~k 169 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGT-AVLRQ-WLPTGTLLVDSDLNDFV---------SDA----D-STLIGDCATVHT-ANK 169 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH-HHHHH-HSCTTCEEEEEESSCCB---------CSS----S-EEEESCGGGEEE-SSC
T ss_pred ecCCCEEEeCCCCCCCCCCCcH-HHHHH-hCCCCcEEEEeeCcccc---------cCC----C-eEEEcccccccc-CCC
Confidence 467899999996 334666 34544 456 4799999998743 111 2 569999866443 367
Q ss_pred cceEEecccc---CC--hh------hHHHHHHHHHhhcccCeEEEEEcccccccccCCCCccccCCcEEEEEEcCCC--c
Q 041205 204 YDCIILAALA---GN--EE------EKAKILGHIRKYMKEGGVLLVRSAKGARAFLYPVVEHELFDFKVLSIFHPTN--D 270 (535)
Q Consensus 204 FDvVfiaALV---gm--~e------dK~~VL~eL~rvLKPGGvLVvRsa~GlR~fLYP~Vdpdl~GFeil~v~hP~~--e 270 (535)
||+|+.|-.- |. .. =-+.+++-+.++|+|||.|++.-.+|-. +..+.....-|..+....|.. +
T Consensus 170 ~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg---~~~L~~lrk~F~~VK~fK~ASRa~ 246 (344)
T 3r24_A 170 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW---NADLYKLMGHFSWWTAFVTNVNAS 246 (344)
T ss_dssp EEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC---CHHHHHHHTTEEEEEEEEEGGGTT
T ss_pred CCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC---HHHHHHHHhhCCeEEEECCCCCCC
Confidence 9999987332 32 11 1345566678899999999999877732 111111225677765553322 2
Q ss_pred ceeeeEEEecCCCCCccccccc
Q 041205 271 VINSVVLLQLPKDPPKLVLKDK 292 (535)
Q Consensus 271 VINSVVvARK~~~~~~l~l~~g 292 (535)
-.-.+++++.-+.. .-..+.|
T Consensus 247 SsEvYLVG~gfKg~-~~~~idg 267 (344)
T 3r24_A 247 SSEAFLIGANYLGK-PKEQIDG 267 (344)
T ss_dssp SSCEEEEEEEECSS-CSSCCCH
T ss_pred CeeEEEEeeeccCC-Cceeecc
Confidence 23347777643322 2335666
No 374
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=96.23 E-value=0.013 Score=62.37 Aligned_cols=100 Identities=23% Similarity=0.255 Sum_probs=69.8
Q ss_pred CCEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh-------cCCcC--------CCeEEEEcccc
Q 041205 132 LKKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRIVSS-------DDEIE--------KRMKFLTCDIM 195 (535)
Q Consensus 132 pkRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~-------lG~Ls--------~rI~Fi~GDA~ 195 (535)
-++|..||+|.+|.+ +..+++ .|..|+.+|++++.++.+++.+.+ .|.+. .+|++. .|.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~---aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~- 79 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAAS---HGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDI- 79 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCG-
T ss_pred CCEEEEECcCHHHHHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCH-
Confidence 468999999998876 445555 578999999999999998775432 22110 145442 232
Q ss_pred ccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 196 EVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 196 el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+.|+|+.+ ......-|..++.++.+.++||.+|+...
T Consensus 80 ---~~~~~aDlVIeA-Vpe~~~vk~~v~~~l~~~~~~~~Ilasnt 120 (483)
T 3mog_A 80 ---HALAAADLVIEA-ASERLEVKKALFAQLAEVCPPQTLLTTNT 120 (483)
T ss_dssp ---GGGGGCSEEEEC-CCCCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ---HHhcCCCEEEEc-CCCcHHHHHHHHHHHHHhhccCcEEEecC
Confidence 134568999986 33223467899999999999999887644
No 375
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.19 E-value=0.0099 Score=59.52 Aligned_cols=93 Identities=20% Similarity=0.283 Sum_probs=64.3
Q ss_pred CCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCCh---hHHHHHHHHHhhcCCcCCCeEEEEccccc-cccCCCCcceE
Q 041205 132 LKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDE---TANNLARRIVSSDDEIEKRMKFLTCDIME-VKEKLGEYDCI 207 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDp---eAIelAR~li~~lG~Ls~rI~Fi~GDA~e-l~~dL~~FDvV 207 (535)
+++||-+|+|++|..++.+|+. .|++|+++|.++ +..+.+++ +| . +.+. .. |..+ +......+|+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~--~Ga~Vi~~~~~~~~~~~~~~~~~----~g-a-~~v~-~~-~~~~~~~~~~~~~d~v 250 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT--YGLEVWMANRREPTEVEQTVIEE----TK-T-NYYN-SS-NGYDKLKDSVGKFDVI 250 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH--HTCEEEEEESSCCCHHHHHHHHH----HT-C-EEEE-CT-TCSHHHHHHHCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCccchHHHHHHHH----hC-C-ceec-hH-HHHHHHHHhCCCCCEE
Confidence 8999999999999999999984 578999999998 77766654 46 2 1111 00 1111 11001469999
Q ss_pred EeccccCChhhHHHHH-HHHHhhcccCeEEEEEc
Q 041205 208 ILAALAGNEEEKAKIL-GHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 208 fiaALVgm~edK~~VL-~eL~rvLKPGGvLVvRs 240 (535)
|-.+.. ...+ +...+.|++||.++.-.
T Consensus 251 id~~g~------~~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 251 IDATGA------DVNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EECCCC------CTHHHHHHGGGEEEEEEEEECS
T ss_pred EECCCC------hHHHHHHHHHHHhcCCEEEEEe
Confidence 975443 1245 88889999999988754
No 376
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.19 E-value=0.025 Score=56.78 Aligned_cols=106 Identities=12% Similarity=0.096 Sum_probs=61.1
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh--cCCcCCCeEEEEc-cccccccCCCCcc
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSS--DDEIEKRMKFLTC-DIMEVKEKLGEYD 205 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~--lG~Ls~rI~Fi~G-DA~el~~dL~~FD 205 (535)
+.++++|+|+||+|+|.|-. .++ ...-..|.|.++-.+- . ..-+.. .| + +-++|.+| |..++. ...||
T Consensus 71 ikpg~~VVDLGaAPGGWSQv-Aa~-~~~vg~V~G~vig~D~-~--~~P~~~~~~G-v-~~i~~~~G~Df~~~~--~~~~D 141 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYY-AAT-MKNVQEVRGYTKGGPG-H--EEPMLMQSYG-W-NIVTMKSGVDVFYKP--SEISD 141 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHH-HTT-STTEEEEEEECCCSTT-S--CCCCCCCSTT-G-GGEEEECSCCGGGSC--CCCCS
T ss_pred CCCCCEEEEcCCCCCHHHHH-Hhh-hcCCCCceeEEEcccc-c--cCCCcccCCC-c-eEEEeeccCCccCCC--CCCCC
Confidence 47899999999999888854 334 1111233444443320 0 000000 12 1 22366657 987632 23699
Q ss_pred eEEecccc--CC-hhhHH---HHHHHHHhhcccCe-EEEEEcccc
Q 041205 206 CIILAALA--GN-EEEKA---KILGHIRKYMKEGG-VLLVRSAKG 243 (535)
Q Consensus 206 vVfiaALV--gm-~edK~---~VL~eL~rvLKPGG-vLVvRsa~G 243 (535)
+|+.|..- |. .-|-. .+|+-+.++|+||| -|++.-.+|
T Consensus 142 vVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 142 TLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred EEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 99987432 33 22222 25767778999999 999876554
No 377
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=96.17 E-value=0.0074 Score=60.76 Aligned_cols=97 Identities=8% Similarity=0.030 Sum_probs=64.5
Q ss_pred CCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC--CCCcce
Q 041205 130 AQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK--LGEYDC 206 (535)
Q Consensus 130 ~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d--L~~FDv 206 (535)
.++++||-+|+ |++|..++.+|+. .|++|+++. +++..+.++ ++| ...-+.....|..+.... .+.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~--~Ga~Vi~~~-~~~~~~~~~----~lG-a~~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRL--SGYIPIATC-SPHNFDLAK----SRG-AEEVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHH--TTCEEEEEE-CGGGHHHHH----HTT-CSEEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHH--CCCEEEEEe-CHHHHHHHH----HcC-CcEEEECCCchHHHHHHHHccCCccE
Confidence 78899999999 8899999999994 688999985 888776665 456 211111111222111111 134999
Q ss_pred EEeccccCChhhHHHHHHHHHhhc-ccCeEEEEEc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYM-KEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvL-KPGGvLVvRs 240 (535)
||-...- ...++...+.| ++||+++.-.
T Consensus 235 v~d~~g~------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 235 ALDCITN------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEESSCS------HHHHHHHHHHSCTTCEEEEESS
T ss_pred EEECCCc------hHHHHHHHHHhhcCCCEEEEEe
Confidence 9864332 35677788888 6999998743
No 378
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.16 E-value=0.0026 Score=65.91 Aligned_cols=100 Identities=13% Similarity=0.124 Sum_probs=68.9
Q ss_pred hCCCCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccc-----------
Q 041205 127 TGVAQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDI----------- 194 (535)
Q Consensus 127 ~~l~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA----------- 194 (535)
..+.++++||-+|+ |++|+.++.+|+. .|++|++++.+++..+.+++ +| ...-+.....|.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~--~Ga~vi~~~~~~~~~~~~~~----lG-a~~vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALA--GGANPICVVSSPQKAEICRA----MG-AEAIIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----HT-CCEEEETTTTTCCSEEETTEECH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHH--cCCeEEEEECCHHHHHHHHh----hC-CcEEEecCcCcccccccccccch
Confidence 45688999999998 9999999999994 68999999999998888865 45 211111101110
Q ss_pred -------cccc--cCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 195 -------MEVK--EKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 195 -------~el~--~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..+. ..-..+|+||-. +| . ..+....+.|+|||++++-.
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~--~G---~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEH--PG---R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEEC--SC---H--HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEc--CC---c--hhHHHHHHHhhCCcEEEEEe
Confidence 0111 111369999864 23 1 56888889999999998743
No 379
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=96.16 E-value=0.0065 Score=60.63 Aligned_cols=101 Identities=10% Similarity=0.057 Sum_probs=61.1
Q ss_pred HhhCCCCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEE-eCChhHHHHHHHHHhhcCCcCCCeEEEEc------cccc
Q 041205 125 ENTGVAQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNI-DIDETANNLARRIVSSDDEIEKRMKFLTC------DIME 196 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGI-DIDpeAIelAR~li~~lG~Ls~rI~Fi~G------DA~e 196 (535)
....+.++++||-+|+ |++|..++.+|+. .|++++++ +.++..- ..++.++++| . +. ++.. ++.+
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~--~Ga~vi~~~~~~~~~~-~~~~~~~~lG-a-~~--vi~~~~~~~~~~~~ 233 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAA--LGLRTINVVRDRPDIQ-KLSDRLKSLG-A-EH--VITEEELRRPEMKN 233 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHH--HTCEEEEEECCCSCHH-HHHHHHHHTT-C-SE--EEEHHHHHSGGGGG
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHH--cCCEEEEEecCccchH-HHHHHHHhcC-C-cE--EEecCcchHHHHHH
Confidence 3346789999999997 9999999999994 47766554 4544321 1123445667 2 21 2221 1112
Q ss_pred cccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 197 VKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 197 l~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+....+.+|+||-.. | . ... ....+.|+|||+++.-
T Consensus 234 ~~~~~~~~Dvvid~~--g---~-~~~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 234 FFKDMPQPRLALNCV--G---G-KSS-TELLRQLARGGTMVTY 269 (357)
T ss_dssp TTSSSCCCSEEEESS--C---H-HHH-HHHHTTSCTTCEEEEC
T ss_pred HHhCCCCceEEEECC--C---c-HHH-HHHHHhhCCCCEEEEE
Confidence 111112499998643 2 1 122 3577899999999875
No 380
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.13 E-value=0.01 Score=61.14 Aligned_cols=61 Identities=10% Similarity=0.066 Sum_probs=49.2
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK 198 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~ 198 (535)
+++.|+|||.|++.+|..++.. ..+.+|++||+|+..+..-++.. . . .+++++.+|+.++.
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~--~~~~~vvavE~D~~l~~~L~~~~-~-~---~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNK--YCPRQYSLLEKRSSLYKFLNAKF-E-G---SPLQILKRDPYDWS 118 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHH--HCCSEEEEECCCHHHHHHHHHHT-T-T---SSCEEECSCTTCHH
T ss_pred CCCEEEEECCCCCHHHHHHHhh--CCCCEEEEEecCHHHHHHHHHhc-c-C---CCEEEEECCccchh
Confidence 3689999999999999887754 23568999999999998877766 2 2 48999999997653
No 381
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=96.13 E-value=0.007 Score=65.01 Aligned_cols=89 Identities=19% Similarity=0.165 Sum_probs=63.7
Q ss_pred CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 129 VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 129 l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..++++|+-||+|++|......++. .|++|+++|+++...+.|+ ..| . ++ .+..++ +..+|+|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka--~Ga~Viv~d~~~~~~~~A~----~~G-a----~~--~~l~e~---l~~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKG--QGARVSVTEIDPINALQAM----MEG-F----DV--VTVEEA---IGDADIVV 334 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHH----HTT-C----EE--CCHHHH---GGGCSEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHH----HcC-C----EE--ecHHHH---HhCCCEEE
Confidence 4689999999999999999888884 5789999999998877665 346 2 22 232222 34689999
Q ss_pred eccccCChhhHHHHH-HHHHhhcccCeEEEEE
Q 041205 209 LAALAGNEEEKAKIL-GHIRKYMKEGGVLLVR 239 (535)
Q Consensus 209 iaALVgm~edK~~VL-~eL~rvLKPGGvLVvR 239 (535)
...... .++ ....+.|+|||+|+.-
T Consensus 335 ~atgt~------~~i~~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 335 TATGNK------DIIMLEHIKAMKDHAILGNI 360 (494)
T ss_dssp ECSSSS------CSBCHHHHHHSCTTCEEEEC
T ss_pred ECCCCH------HHHHHHHHHhcCCCcEEEEe
Confidence 864321 122 2556679999998664
No 382
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.13 E-value=0.0027 Score=65.02 Aligned_cols=99 Identities=20% Similarity=0.188 Sum_probs=64.4
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEE---Ec---------------
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFL---TC--------------- 192 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi---~G--------------- 192 (535)
++++|+.||+|++|..++.+|+. .|++|+.+|++++..+.+++ +| . ++. ..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~~~d~~~~~~~~~~~----~G-a----~~~~i~~~~~~~~~~~~~~~~~~ 239 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKR--LGAVVMATDVRAATKEQVES----LG-G----KFITVDDEAMKTAETAGGYAKEM 239 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCSTTHHHHHH----TT-C----EECCC------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cC-C----eEEeecccccccccccccchhhc
Confidence 68999999999999999999884 57899999999988776654 34 1 111 00
Q ss_pred -------cccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 193 -------DIMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 193 -------DA~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+...+......+|+|+...+....+.+.-+.++..+.|+|||+|+--.
T Consensus 240 s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 240 GEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp -----CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred CHHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 000011222468999976655210111112366777899999886544
No 383
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.10 E-value=0.0072 Score=62.50 Aligned_cols=110 Identities=11% Similarity=-0.017 Sum_probs=73.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHh-------------h-cCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILAS-------------Q-HMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIM 195 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk-------------~-~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~ 195 (535)
..+.+|+|+||+.+|-|.+.+.. + ..|..+|..-|+-...-...-+.+...- -.++--|+.|...
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-~~~~~~f~~gvpg 128 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-DVDGVCFINGVPG 128 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-SCTTCEEEEEEES
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-ccCCCEEEEecch
Confidence 34688999999988777655433 0 2456788899987766554444333211 0124578888765
Q ss_pred c---cccCCCCcceEEeccccCC---hh------------------------------hHHHHHHHHHhhcccCeEEEEE
Q 041205 196 E---VKEKLGEYDCIILAALAGN---EE------------------------------EKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 196 e---l~~dL~~FDvVfiaALVgm---~e------------------------------dK~~VL~eL~rvLKPGGvLVvR 239 (535)
. -+++.+.+|+||..+.+|| .+ |-..+|+..++.|+|||++++-
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 4 4456678999998888776 12 1234588889999999999885
Q ss_pred c
Q 041205 240 S 240 (535)
Q Consensus 240 s 240 (535)
.
T Consensus 209 ~ 209 (359)
T 1m6e_X 209 I 209 (359)
T ss_dssp E
T ss_pred E
Confidence 5
No 384
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=96.08 E-value=0.03 Score=53.50 Aligned_cols=89 Identities=10% Similarity=0.048 Sum_probs=59.8
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEeccc
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAAL 212 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaAL 212 (535)
++|..||+|.+|.+-..... ..|.+|+++|.+++.++.++ +.| ... . ...|..++ .+.|+|+++.-
T Consensus 1 m~i~iiG~G~~G~~~a~~l~--~~g~~V~~~~~~~~~~~~~~----~~g-~~~--~-~~~~~~~~----~~~D~vi~av~ 66 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLR--RRGHYLIGVSRQQSTCEKAV----ERQ-LVD--E-AGQDLSLL----QTAKIIFLCTP 66 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHH--HTTCEEEEECSCHHHHHHHH----HTT-SCS--E-EESCGGGG----TTCSEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHH--HCCCEEEEEECCHHHHHHHH----hCC-CCc--c-ccCCHHHh----CCCCEEEEECC
Confidence 48999999988776443322 14679999999998876653 346 321 1 13343322 46899999633
Q ss_pred cCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 213 AGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 213 Vgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
. .....++..+.+.++||.+|+.
T Consensus 67 ~---~~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 67 I---QLILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp H---HHHHHHHHHHGGGSCTTCEEEE
T ss_pred H---HHHHHHHHHHHhhCCCCCEEEE
Confidence 3 4567888889888999887654
No 385
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=96.08 E-value=0.0043 Score=63.79 Aligned_cols=100 Identities=14% Similarity=0.037 Sum_probs=68.8
Q ss_pred hCCCCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccc-----------
Q 041205 127 TGVAQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDI----------- 194 (535)
Q Consensus 127 ~~l~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA----------- 194 (535)
..+.++++||-+|+ |++|..++.+|+. .|++|++++.+++..+.+++ +| ...-+.....|.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~--~Ga~vi~~~~~~~~~~~~~~----lG-a~~~i~~~~~~~~~~~~~~~~~~ 288 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKN--GGGIPVAVVSSAQKEAAVRA----LG-CDLVINRAELGITDDIADDPRRV 288 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----TT-CCCEEEHHHHTCCTTGGGCHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHh----cC-CCEEEeccccccccccccccccc
Confidence 45688999999997 9999999999994 68999999999998887754 56 211111111110
Q ss_pred --------ccccc-CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 195 --------MEVKE-KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 195 --------~el~~-dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..+.. .-..+|+||-.+.. ..+....+.|++||.++.-.
T Consensus 289 ~~~~~~~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 289 VETGRKLAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEESC
T ss_pred chhhhHHHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEEe
Confidence 00000 01359999864321 36788888999999998854
No 386
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.07 E-value=0.002 Score=66.89 Aligned_cols=98 Identities=22% Similarity=0.259 Sum_probs=63.9
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccc---------------
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIM--------------- 195 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~--------------- 195 (535)
++++|+.||+|++|..++.+|+. .|++|+.+|.+++..+.+++ +|. +++..|..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~v~D~~~~~~~~~~~----lGa-----~~~~~~~~~~~~~~~g~~~~~~~ 239 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANS--LGAIVRAFDTRPEVKEQVQS----MGA-----EFLELDFKEEAGSGDGYAKVMSD 239 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCGGGHHHHHH----TTC-----EECCC--------CCHHHHHHSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHH----cCC-----EEEEecccccccccccchhhccH
Confidence 68999999999999999999884 57899999999998777643 351 22211100
Q ss_pred --------ccccCCCCcceEEecccc-CChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 196 --------EVKEKLGEYDCIILAALA-GNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 196 --------el~~dL~~FDvVfiaALV-gm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.+......+|+|+...++ |. +.+.-+-++..+.|+|||+|+--.
T Consensus 240 ~~~~~~~~~l~e~~~~aDvVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 240 AFIKAEMELFAAQAKEVDIIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEc
Confidence 111112358999987555 21 011112256677899999887644
No 387
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=96.07 E-value=0.0059 Score=60.72 Aligned_cols=101 Identities=12% Similarity=0.051 Sum_probs=68.6
Q ss_pred HhhCCCCC--CEEEEEcc-CCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc--cccccc
Q 041205 125 ENTGVAQL--KKVAFVGS-GPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC--DIMEVK 198 (535)
Q Consensus 125 ~~~~l~~p--kRVLeIGS-GplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G--DA~el~ 198 (535)
....+.++ ++||-.|+ |++|..++.+|+. .|+ +|+++|.+++..+.+++ .+| . ...+-.. |..+..
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~--~Ga~~Vi~~~~~~~~~~~~~~---~~g-~--~~~~d~~~~~~~~~~ 223 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHF--LGCSRVVGICGTHEKCILLTS---ELG-F--DAAINYKKDNVAEQL 223 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHH---TSC-C--SEEEETTTSCHHHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHH--CCCCeEEEEeCCHHHHHHHHH---HcC-C--ceEEecCchHHHHHH
Confidence 34566788 99999997 9999999999884 578 99999999988776654 245 2 1111111 111101
Q ss_pred cC--CCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 199 EK--LGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 199 ~d--L~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.. .+.+|+||-.+ | ...+....+.|++||++++-.
T Consensus 224 ~~~~~~~~d~vi~~~--G-----~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 224 RESCPAGVDVYFDNV--G-----GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp HHHCTTCEEEEEESC--C-----HHHHHHHHHTEEEEEEEEECC
T ss_pred HHhcCCCCCEEEECC--C-----HHHHHHHHHHhccCcEEEEEC
Confidence 00 12699998653 3 156888899999999998754
No 388
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.05 E-value=0.042 Score=52.55 Aligned_cols=95 Identities=19% Similarity=0.191 Sum_probs=59.7
Q ss_pred CEEEEEccCCChhhHHH-HHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcC-----C----CeEEEEccccccccCCC
Q 041205 133 KKVAFVGSGPMPLTSII-LASQHMKSTHFDNIDIDETANNLARRIVSSDDEIE-----K----RMKFLTCDIMEVKEKLG 202 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~-LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls-----~----rI~Fi~GDA~el~~dL~ 202 (535)
++|+.||+|.+|.+-.. |++ .|.+|+.+|++++.++..++. | +. . ++.+. +..++.....
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~r~~~~~~~~~~~----g-~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 73 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ---GGNDVTLIDQWPAHIEAIRKN----G-LIADFNGEEVVANLPIF--SPEEIDHQNE 73 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHH----C-EEEEETTEEEEECCCEE--CGGGCCTTSC
T ss_pred CeEEEECcCHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHhC----C-EEEEeCCCeeEecceee--cchhhcccCC
Confidence 68999999988766433 333 567999999999877655432 3 10 0 01111 1111111223
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
++|+||+.--. ..-..+++.+.+.++||.+++.-.
T Consensus 74 ~~d~vi~~v~~---~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 74 QVDLIIALTKA---QQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp CCSEEEECSCH---HHHHHHHHHHGGGCCTTCEEEECC
T ss_pred CCCEEEEEecc---ccHHHHHHHHHHhcCCCCEEEEec
Confidence 79999996332 456778888988999988776543
No 389
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.04 E-value=0.03 Score=59.70 Aligned_cols=101 Identities=16% Similarity=0.231 Sum_probs=66.5
Q ss_pred CCCEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHH-HHHHHHHh---hcCCc--------CCCeEEEEcccccc
Q 041205 131 QLKKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETAN-NLARRIVS---SDDEI--------EKRMKFLTCDIMEV 197 (535)
Q Consensus 131 ~pkRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAI-elAR~li~---~lG~L--------s~rI~Fi~GDA~el 197 (535)
+-++|..||+|.+|.+ |..+|+ .|..|+.+|++++.. +..++.++ +.|.+ -.++++. .|.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~---aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl--- 125 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGL---AGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDF--- 125 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCG---
T ss_pred cCCEEEEECCCHHHHHHHHHHHH---CCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCH---
Confidence 3479999999998877 455555 588999999999821 11111221 22311 1356552 332
Q ss_pred ccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 198 KEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 198 ~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+.|+|+.+..- -..-|..++.++.+.++||.+|+..+
T Consensus 126 -~al~~aDlVIeAVpe-~~~vk~~v~~~l~~~~~~~aIlasnT 166 (460)
T 3k6j_A 126 -HKLSNCDLIVESVIE-DMKLKKELFANLENICKSTCIFGTNT 166 (460)
T ss_dssp -GGCTTCSEEEECCCS-CHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred -HHHccCCEEEEcCCC-CHHHHHHHHHHHHhhCCCCCEEEecC
Confidence 235679999986332 12458899999999999999987654
No 390
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=96.04 E-value=0.0037 Score=61.33 Aligned_cols=98 Identities=11% Similarity=0.141 Sum_probs=64.8
Q ss_pred CCCCCC-EEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC--CCC
Q 041205 128 GVAQLK-KVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK--LGE 203 (535)
Q Consensus 128 ~l~~pk-RVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d--L~~ 203 (535)
.+.+++ +||-+|+ |++|..++.+|+. .|++|++++.+++..+.+++ +| ...-+.....| .+.... ...
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~--~Ga~vi~~~~~~~~~~~~~~----lG-a~~~i~~~~~~-~~~~~~~~~~~ 216 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAK--RGYTVEASTGKAAEHDYLRV----LG-AKEVLAREDVM-AERIRPLDKQR 216 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHH--TTCCEEEEESCTTCHHHHHH----TT-CSEEEECC----------CCSCC
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHH----cC-CcEEEecCCcH-HHHHHHhcCCc
Confidence 456665 8999997 9999999999994 57899999999988887765 45 21111111111 111111 135
Q ss_pred cceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 204 YDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 204 FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+|+||-.... ..+....+.+++||++++-.
T Consensus 217 ~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 217 WAAAVDPVGG-------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EEEEEECSTT-------TTHHHHHHTEEEEEEEEECS
T ss_pred ccEEEECCcH-------HHHHHHHHhhccCCEEEEEe
Confidence 9999864322 14778888999999998753
No 391
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.00 E-value=0.019 Score=60.35 Aligned_cols=100 Identities=20% Similarity=0.201 Sum_probs=66.6
Q ss_pred CEEEEEccCCChhhH-HHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh---cCCc---------CCCeEEEEcccccccc
Q 041205 133 KKVAFVGSGPMPLTS-IILASQHMKSTHFDNIDIDETANNLARRIVSS---DDEI---------EKRMKFLTCDIMEVKE 199 (535)
Q Consensus 133 kRVLeIGSGplPlTA-I~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~---lG~L---------s~rI~Fi~GDA~el~~ 199 (535)
++|..||+|.+|.+. ..||+ .|.+|+++|+|++.++..++-... -| + ..++++ +.|..+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~---~G~~V~~~D~~~~~v~~l~~g~~~i~e~g-l~~~l~~~~~~~~l~~-t~d~~ea-- 75 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE---LGANVRCIDTDRNKIEQLNSGTIPIYEPG-LEKMIARNVKAGRLRF-GTEIEQA-- 75 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHTCSCCCSTT-HHHHHHHHHHTTSEEE-ESCHHHH--
T ss_pred CEEEEECcCHHHHHHHHHHHh---cCCEEEEEECCHHHHHHHHcCCCcccCCC-HHHHHHhhcccCcEEE-ECCHHHH--
Confidence 699999999888764 44555 578999999999988776551100 01 0 124554 3343322
Q ss_pred CCCCcceEEeccccCC-------hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 KLGEYDCIILAALAGN-------EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 dL~~FDvVfiaALVgm-------~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..+.|+||++---.. ......+++.+.+.+++|.+++..+
T Consensus 76 -~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 76 -VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp -GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred -HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 246799998632210 1157888999999999999888876
No 392
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=95.98 E-value=0.065 Score=53.53 Aligned_cols=105 Identities=15% Similarity=0.118 Sum_probs=67.7
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHH-HHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANN-LARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIe-lAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
...++|.-||+|.+|.+............+|+.+|++++..+ .+..+......+...+++..++. ..+.+.|+|+
T Consensus 4 ~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~----~al~~aDvVi 79 (316)
T 1ldn_A 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----DDCRDADLVV 79 (316)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG----GGTTTCSEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcH----HHhCCCCEEE
Confidence 356799999999999886665542222458999999998555 24555554331223566665442 3456799999
Q ss_pred eccccCCh-------------hhHHHHHHHHHhhcccCeEEEEE
Q 041205 209 LAALAGNE-------------EEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 209 iaALVgm~-------------edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+.+.++.. +-+..+.+.+.++ .|+|.+++-
T Consensus 80 ia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv~ 122 (316)
T 1ldn_A 80 ICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVA 122 (316)
T ss_dssp ECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEEC
T ss_pred EcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEEe
Confidence 98766421 3355666666665 488876663
No 393
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=95.93 E-value=0.028 Score=53.87 Aligned_cols=90 Identities=17% Similarity=0.101 Sum_probs=59.7
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCc--EEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCC-CcceEEe
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKST--HFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLG-EYDCIIL 209 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga--~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~-~FDvVfi 209 (535)
++|..||+|.+|.+-...... .|. +|+++|.+++..+.++ ..| ... . ...|..+ ... ..|+|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~--~g~~~~V~~~d~~~~~~~~~~----~~g-~~~--~-~~~~~~~---~~~~~aDvVil 68 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR--SGFKGKIYGYDINPESISKAV----DLG-IID--E-GTTSIAK---VEDFSPDFVML 68 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH--TTCCSEEEEECSCHHHHHHHH----HTT-SCS--E-EESCGGG---GGGTCCSEEEE
T ss_pred cEEEEEecCHHHHHHHHHHHh--cCCCcEEEEEeCCHHHHHHHH----HCC-Ccc--c-ccCCHHH---HhcCCCCEEEE
Confidence 489999999988775443332 344 8999999999877654 346 311 1 1233322 234 6899999
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
+.-. ..-..++..+.+.++||++|+.
T Consensus 69 avp~---~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 69 SSPV---RTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp CSCH---HHHHHHHHHHHHHSCTTCEEEE
T ss_pred cCCH---HHHHHHHHHHHhhCCCCcEEEE
Confidence 6333 3445788888888999986654
No 394
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.93 E-value=0.02 Score=59.70 Aligned_cols=96 Identities=16% Similarity=0.080 Sum_probs=71.2
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc----cCCCCcce
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK----EKLGEYDC 206 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~----~dL~~FDv 206 (535)
..++|+-+|+|.+|......... .|..|+.||.|++.++.+++ .| +.++.||+.+.. ......|+
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~--~g~~vvvId~d~~~v~~~~~----~g-----~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLS--SGVKMVVLDHDPDHIETLRK----FG-----MKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEECCHHHHHHHHH----TT-----CCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHh----CC-----CeEEEcCCCCHHHHHhcCCCccCE
Confidence 45789999999888876655542 57899999999999988763 45 357889997632 13457999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|++...- .+....+-...+.+.|+..+++|.
T Consensus 72 viv~~~~---~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 72 LINAIDD---PQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp EEECCSS---HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEECCCC---hHHHHHHHHHHHHhCCCCeEEEEE
Confidence 9886433 455666677778899998888886
No 395
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.92 E-value=0.051 Score=57.15 Aligned_cols=100 Identities=17% Similarity=0.285 Sum_probs=67.7
Q ss_pred CCEEEEEccCCChhhHH-HHHhhcCCCcEEEEEeCChhHHHHHHHHHhh-------cCCc------CCCeEEEEcccccc
Q 041205 132 LKKVAFVGSGPMPLTSI-ILASQHMKSTHFDNIDIDETANNLARRIVSS-------DDEI------EKRMKFLTCDIMEV 197 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI-~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~-------lG~L------s~rI~Fi~GDA~el 197 (535)
-++|..||+|.+|.+-. .++. .|..|+.+|++++.++.+++.+.. .|.+ .....+ +.|.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~---~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~--- 109 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR---VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST--- 109 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG---
T ss_pred CCEEEEECcCHHHHHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH---
Confidence 46899999999886533 3333 578999999999999988764321 1100 011233 4443
Q ss_pred ccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 198 KEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 198 ~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
....+.|+|+.+. .....-|..++.++...++||.+|+. +.
T Consensus 110 -~~~~~aDlVIeaV-pe~~~~k~~v~~~l~~~~~~~~ii~s-nT 150 (463)
T 1zcj_A 110 -KELSTVDLVVEAV-FEDMNLKKKVFAELSALCKPGAFLCT-NT 150 (463)
T ss_dssp -GGGTTCSEEEECC-CSCHHHHHHHHHHHHHHSCTTCEEEE-CC
T ss_pred -HHHCCCCEEEEcC-CCCHHHHHHHHHHHHhhCCCCeEEEe-CC
Confidence 2346789999863 32234578999999999999998876 44
No 396
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.85 E-value=0.05 Score=47.59 Aligned_cols=99 Identities=7% Similarity=0.040 Sum_probs=65.6
Q ss_pred CCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCCh-hHHHHHHHHHhhcCCcCCCeEEEEccccccc----cCCCCcce
Q 041205 132 LKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDE-TANNLARRIVSSDDEIEKRMKFLTCDIMEVK----EKLGEYDC 206 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDp-eAIelAR~li~~lG~Ls~rI~Fi~GDA~el~----~dL~~FDv 206 (535)
..+|+-+|+|.+|........ ..|..|+.||.++ +.++..... .. ..+.++.||+.+.. ....++|+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~--~~g~~V~vid~~~~~~~~~~~~~---~~---~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLN--QRGQNVTVISNLPEDDIKQLEQR---LG---DNADVIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHH--HTTCCEEEEECCCHHHHHHHHHH---HC---TTCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred CCcEEEECCCHHHHHHHHHHH--HCCCCEEEEECCChHHHHHHHHh---hc---CCCeEEEcCCCCHHHHHHcChhhCCE
Confidence 568999999987766544333 2578999999984 544333322 11 24688999987421 13567999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
|++...- .+....+....+.+.|...++++-.
T Consensus 75 vi~~~~~---d~~n~~~~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 75 ILALSDN---DADNAFVVLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp EEECSSC---HHHHHHHHHHHHHHTSSSCEEEECS
T ss_pred EEEecCC---hHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 9986433 3455666677778888888888653
No 397
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.80 E-value=0.034 Score=54.40 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=58.6
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCc--EEEEEeCChhHHH-HHHHHHhhcCCcCCCeEEEEc-cccccccCCCCcce
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKST--HFDNIDIDETANN-LARRIVSSDDEIEKRMKFLTC-DIMEVKEKLGEYDC 206 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga--~VtGIDIDpeAIe-lAR~li~~lG~Ls~rI~Fi~G-DA~el~~dL~~FDv 206 (535)
..++|+.||+|.+|.+....... .|. +|+.+|++++.++ .+..+..... +...+.+... |. ....++|+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~--~g~~~~V~l~d~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~----~~~~~aD~ 78 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQ--RGIAREIVLEDIAKERVEAEVLDMQHGSS-FYPTVSIDGSDDP----EICRDADM 78 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSSHHHHHHHHHHHHHTGG-GSTTCEEEEESCG----GGGTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCChhHHHHHHHHHHhhhh-hcCCeEEEeCCCH----HHhCCCCE
Confidence 45899999999988875443321 344 8999999987765 2332222221 1123344333 32 23457999
Q ss_pred EEeccccCCh-------------hhHHHHHHHHHhhcccCeEEEE
Q 041205 207 IILAALAGNE-------------EEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 207 VfiaALVgm~-------------edK~~VL~eL~rvLKPGGvLVv 238 (535)
|++..-.... +-...++..+.++ .|+++++.
T Consensus 79 Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~ 122 (319)
T 1lld_A 79 VVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYML 122 (319)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE
Confidence 9997633211 1122677777774 78887765
No 398
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.77 E-value=0.038 Score=53.19 Aligned_cols=91 Identities=15% Similarity=0.168 Sum_probs=59.8
Q ss_pred CCEEEEEccCCChhhHHH-HHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 132 LKKVAFVGSGPMPLTSII-LASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~-LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
.++|..||+|.+|.+-.. +++ ...+.+|+++|.+++..+.+++ .| ... ....|..+ ...+.|+||++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~-~g~~~~V~~~d~~~~~~~~~~~----~g-~~~---~~~~~~~~---~~~~aDvVila 73 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKR-DHPHYKIVGYNRSDRSRDIALE----RG-IVD---EATADFKV---FAALADVIILA 73 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSSHHHHHHHHH----TT-SCS---EEESCTTT---TGGGCSEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHh-CCCCcEEEEEcCCHHHHHHHHH----cC-Ccc---cccCCHHH---hhcCCCEEEEc
Confidence 469999999988876433 333 2236799999999988776543 45 211 12233322 22468999996
Q ss_pred cccCChhhHHHHHHHHHhh-cccCeEEE
Q 041205 211 ALAGNEEEKAKILGHIRKY-MKEGGVLL 237 (535)
Q Consensus 211 ALVgm~edK~~VL~eL~rv-LKPGGvLV 237 (535)
.-. ..-..++..+.+. ++||.+|+
T Consensus 74 vp~---~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 74 VPI---KKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp SCH---HHHHHHHHHHHTSCCCTTCEEE
T ss_pred CCH---HHHHHHHHHHHhcCCCCCCEEE
Confidence 333 3346788888888 88887766
No 399
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.75 E-value=0.029 Score=60.77 Aligned_cols=134 Identities=19% Similarity=0.221 Sum_probs=84.1
Q ss_pred ccchhhHHhHHHHHHHHHH------hhC-CCCCCEEEEEccCCChhhHHHHHhhcC---------C--CcEEEEEeC---
Q 041205 107 PYYENYVKLAKLEYGALIE------NTG-VAQLKKVAFVGSGPMPLTSIILASQHM---------K--STHFDNIDI--- 165 (535)
Q Consensus 107 pYy~NYv~LirlE~~lL~~------~~~-l~~pkRVLeIGSGplPlTAI~LAk~~l---------~--Ga~VtGIDI--- 165 (535)
.||.+.--+.+.++--+.. ... -.+.-+|||+|-| .|+..+...+... + .-+++++|.
T Consensus 35 ~y~s~~~~~~e~~~vf~~~~~l~~~~~~~~~~~~~i~e~gfG-~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~ 113 (676)
T 3ps9_A 35 VYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGFG-TGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPL 113 (676)
T ss_dssp ESSCTTTHHHHHHHHTTGGGTHHHHGGGCSSSEEEEEEECCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCC
T ss_pred cccCCcCHHHhhHhhhhccCChhHHHHhCCCCceEEEEeCCc-hHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCC
Confidence 4777666665544321111 110 1234699999999 5898877655320 1 246999999
Q ss_pred ChhHHHHH-----------HHHHhhcCC---------c---CCCeEEEEccccccccCC-----CCcceEEeccccCC-h
Q 041205 166 DETANNLA-----------RRIVSSDDE---------I---EKRMKFLTCDIMEVKEKL-----GEYDCIILAALAGN-E 216 (535)
Q Consensus 166 DpeAIelA-----------R~li~~lG~---------L---s~rI~Fi~GDA~el~~dL-----~~FDvVfiaALVgm-~ 216 (535)
+.+-+..| +++.+.... + .-.+++..||+.+....+ ..||++|+|+.-.- .
T Consensus 114 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~n 193 (676)
T 3ps9_A 114 TRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKN 193 (676)
T ss_dssp CHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGC
T ss_pred CHHHHHHHHHhChhhHHHHHHHHHhCcccCCCceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCC
Confidence 77666533 334333210 0 124567889998766654 45999999976411 1
Q ss_pred hh--HHHHHHHHHhhcccCeEEEEEcc
Q 041205 217 EE--KAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 217 ed--K~~VL~eL~rvLKPGGvLVvRsa 241 (535)
++ -..+|..+++.++|||.+...+.
T Consensus 194 p~~w~~~~~~~l~~~~~~g~~~~t~~~ 220 (676)
T 3ps9_A 194 PDMWTQNLFNAMARLARPGGTLATFTS 220 (676)
T ss_dssp GGGSCHHHHHHHHHHEEEEEEEEESCC
T ss_pred hhhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 11 37899999999999999988664
No 400
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=95.74 E-value=0.03 Score=54.13 Aligned_cols=86 Identities=22% Similarity=0.301 Sum_probs=58.8
Q ss_pred CEEEEEcc-CCChhhHHH-HHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 133 KKVAFVGS-GPMPLTSII-LASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 133 kRVLeIGS-GplPlTAI~-LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
++|.+||+ |.+|.+-.. |++ .|.+|+.+|.+++..+..++ .| + .+ .+..+ .....|+||++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~---~g~~V~~~~r~~~~~~~~~~----~g-~----~~--~~~~~---~~~~aDvVi~a 74 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD---SAHHLAAIEIAPEGRDRLQG----MG-I----PL--TDGDG---WIDEADVVVLA 74 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---SSSEEEEECCSHHHHHHHHH----TT-C----CC--CCSSG---GGGTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHh----cC-C----Cc--CCHHH---HhcCCCEEEEc
Confidence 59999999 988766433 333 56799999999988776554 45 2 11 12222 23468999986
Q ss_pred cccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 211 ALAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 211 ALVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
.-. .....+++.+.+.++||.+|+.
T Consensus 75 v~~---~~~~~v~~~l~~~l~~~~ivv~ 99 (286)
T 3c24_A 75 LPD---NIIEKVAEDIVPRVRPGTIVLI 99 (286)
T ss_dssp SCH---HHHHHHHHHHGGGSCTTCEEEE
T ss_pred CCc---hHHHHHHHHHHHhCCCCCEEEE
Confidence 333 3467788888888888887665
No 401
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.74 E-value=0.062 Score=53.32 Aligned_cols=98 Identities=21% Similarity=0.265 Sum_probs=60.5
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCc--EEEEEeCChhHHHH-HHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKST--HFDNIDIDETANNL-ARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga--~VtGIDIDpeAIel-AR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
++|.-||+|.+|.+....... .|. +|+.+|++++.++. +..+..... +...+++..+|. ..+.+.|+|++
T Consensus 1 mkI~VIGaG~vG~~la~~la~--~g~~~eV~L~D~~~~~~~~~~~~l~~~~~-~~~~~~i~~~~~----~a~~~aDvVIi 73 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVL--RGSCSELVLVDRDEDRAQAEAEDIAHAAP-VSHGTRVWHGGH----SELADAQVVIL 73 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSSHHHHHHHHHHHTTSCC-TTSCCEEEEECG----GGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCCHHHHHHHHHhhhhhhh-hcCCeEEEECCH----HHhCCCCEEEE
Confidence 489999999998876655442 344 89999999986653 333333222 223455544342 23567899999
Q ss_pred ccccCC-------------hhhHHHHHHHHHhhcccCeEEEE
Q 041205 210 AALAGN-------------EEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 210 aALVgm-------------~edK~~VL~eL~rvLKPGGvLVv 238 (535)
.+.+.. .+-+..++..+.++ .|++.+++
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLV 114 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEE
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 875521 01236677777776 68888776
No 402
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.74 E-value=0.064 Score=57.60 Aligned_cols=116 Identities=14% Similarity=0.073 Sum_probs=77.3
Q ss_pred hhCCCCCCEEEEEccCCChhhHHHHH--hhcCC---------CcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccc
Q 041205 126 NTGVAQLKKVAFVGSGPMPLTSIILA--SQHMK---------STHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDI 194 (535)
Q Consensus 126 ~~~l~~pkRVLeIGSGplPlTAI~LA--k~~l~---------Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA 194 (535)
.+...++.+|+|-.||++|+-.-.+- ..+.. ...+.|+|+++.++.+|+-+.--.| . +.-.+.++|.
T Consensus 212 l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg-~-~~~~I~~~dt 289 (530)
T 3ufb_A 212 VMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG-L-EYPRIDPENS 289 (530)
T ss_dssp HHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT-C-SCCEEECSCT
T ss_pred hhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC-C-cccccccccc
Confidence 34447788999999998877533221 11111 2469999999999999998766566 3 3446788887
Q ss_pred cccccC----CCCcceEEeccccCCh----------------hhHHHHHHHHHhhcc-------cCeEEEEEcccc
Q 041205 195 MEVKEK----LGEYDCIILAALAGNE----------------EEKAKILGHIRKYMK-------EGGVLLVRSAKG 243 (535)
Q Consensus 195 ~el~~d----L~~FDvVfiaALVgm~----------------edK~~VL~eL~rvLK-------PGGvLVvRsa~G 243 (535)
...+.. ...||+|+..--.+.. .-...++.++.+.|+ |||++++--++|
T Consensus 290 L~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 290 LRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp TCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHH
T ss_pred ccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecch
Confidence 643321 2359999975433320 112357888988887 699888877665
No 403
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=95.70 E-value=0.0042 Score=60.95 Aligned_cols=97 Identities=13% Similarity=0.181 Sum_probs=66.3
Q ss_pred CCCCCC-EEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccc-cccccC--CC
Q 041205 128 GVAQLK-KVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDI-MEVKEK--LG 202 (535)
Q Consensus 128 ~l~~pk-RVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA-~el~~d--L~ 202 (535)
.+.+++ +||-+|+ |++|..++.+|+. .|++|++++.+++..+.+++ +| . +.+ +-..+. .+.... ..
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~--~Ga~vi~~~~~~~~~~~~~~----lG-a-~~v-~~~~~~~~~~~~~~~~~ 216 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNK--RGYDVVASTGNREAADYLKQ----LG-A-SEV-ISREDVYDGTLKALSKQ 216 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHH--HTCCEEEEESSSSTHHHHHH----HT-C-SEE-EEHHHHCSSCCCSSCCC
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cC-C-cEE-EECCCchHHHHHHhhcC
Confidence 456665 8999997 9999999999994 57899999999988887765 45 2 111 111111 111111 13
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.+|+||-.. | . ..+....+.++|||+++.-.
T Consensus 217 ~~d~vid~~--g---~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 217 QWQGAVDPV--G---G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp CEEEEEESC--C---T--HHHHHHHTTEEEEEEEEECC
T ss_pred CccEEEECC--c---H--HHHHHHHHhhcCCCEEEEEe
Confidence 599988643 3 1 26888899999999998754
No 404
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.62 E-value=0.072 Score=53.56 Aligned_cols=102 Identities=21% Similarity=0.260 Sum_probs=65.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHH-HHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANN-LARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIe-lAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
++..+|.-||+|.+|++.........-..+++-+|++++.++ .+..+..... +...+++..++- ..+.+.|+|+
T Consensus 3 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~-~~~~~~v~~~~~----~a~~~aDvVi 77 (318)
T 1ez4_A 3 PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA-FTAPKKIYSGEY----SDCKDADLVV 77 (318)
T ss_dssp TTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG-GSCCCEEEECCG----GGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHH-hcCCeEEEECCH----HHhCCCCEEE
Confidence 345799999999999987665542222358999999998776 3666655543 335677765442 2356789999
Q ss_pred eccccCChhhHH------------HHHHHHHhhc---ccCeEEEEE
Q 041205 209 LAALAGNEEEKA------------KILGHIRKYM---KEGGVLLVR 239 (535)
Q Consensus 209 iaALVgm~edK~------------~VL~eL~rvL---KPGGvLVvR 239 (535)
+.+.+. .|. .++.++.+.+ .|+|.+++-
T Consensus 78 i~ag~~---~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 120 (318)
T 1ez4_A 78 ITAGAP---QKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA 120 (318)
T ss_dssp ECCCC-------------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred ECCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 987763 222 4444444332 688877774
No 405
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.57 E-value=0.037 Score=57.40 Aligned_cols=100 Identities=15% Similarity=0.179 Sum_probs=63.3
Q ss_pred CEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHH------------HhhcCCcCCCeEEEEcccccccc
Q 041205 133 KKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRI------------VSSDDEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 133 kRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~l------------i~~lG~Ls~rI~Fi~GDA~el~~ 199 (535)
++|..||+|.+|.+ +..|++ .|.+|+++|+|++.++..++- +.+.- -..++.+ +.|..+.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~---~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~-~~g~l~~-t~~~~~~-- 73 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSA---RGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGR-QTGRLSG-TTDFKKA-- 73 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHH-HTTCEEE-ESCHHHH--
T ss_pred CEEEEECCCHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhc-ccCceEE-eCCHHHH--
Confidence 48999999999886 445555 578999999999988765541 10000 0123544 3333221
Q ss_pred CCCCcceEEeccccCCh-------hhHHHHHHHHHhhccc---CeEEEEEc
Q 041205 200 KLGEYDCIILAALAGNE-------EEKAKILGHIRKYMKE---GGVLLVRS 240 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~-------edK~~VL~eL~rvLKP---GGvLVvRs 240 (535)
..+.|+||++--.... ..-..+++.+.+.+++ |.+|+..+
T Consensus 74 -~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S 123 (436)
T 1mv8_A 74 -VLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS 123 (436)
T ss_dssp -HHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS
T ss_pred -hccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC
Confidence 2458999986322110 0057788999999999 87777654
No 406
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=95.55 E-value=0.0039 Score=61.90 Aligned_cols=96 Identities=10% Similarity=-0.002 Sum_probs=62.2
Q ss_pred CC-CEEEEE-ccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC---CCcc
Q 041205 131 QL-KKVAFV-GSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL---GEYD 205 (535)
Q Consensus 131 ~p-kRVLeI-GSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL---~~FD 205 (535)
++ ++|+-. |+|++|..++.+|+. .|++|+++|.+++..+.+++ +| ...-+.....|..+..... ..+|
T Consensus 163 ~g~~~vli~gg~g~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~----~G-a~~~~~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 163 EGEKAFVMTAGASQLCKLIIGLAKE--EGFRPIVTVRRDEQIALLKD----IG-AAHVLNEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp HCCSEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESCGGGHHHHHH----HT-CSEEEETTSTTHHHHHHHHHHHHCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cC-CCEEEECCcHHHHHHHHHHhcCCCCc
Confidence 44 556544 999999999999994 58999999999999888875 45 2111111011111111111 2599
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+||-.+.. ..+....+.|++||+++.-.
T Consensus 236 ~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 236 IFLDAVTG-------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EEEESSCH-------HHHHHHHHHSCTTCEEEECC
T ss_pred EEEECCCC-------hhHHHHHhhhcCCCEEEEEe
Confidence 99864332 12477888999999998854
No 407
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.52 E-value=0.019 Score=60.82 Aligned_cols=103 Identities=18% Similarity=0.234 Sum_probs=68.8
Q ss_pred CCCCEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh---cCCc---------CCCeEEEEccccc
Q 041205 130 AQLKKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRIVSS---DDEI---------EKRMKFLTCDIME 196 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~---lG~L---------s~rI~Fi~GDA~e 196 (535)
...++|..||+|.+|.+ +.+||+ .|.+|+++|+|++.++..++-... -| + ..+++| +.|..+
T Consensus 6 ~~~~~I~VIG~G~vG~~lA~~la~---~G~~V~~~d~~~~~v~~l~~~~~~i~e~g-l~~~l~~~~~~~~l~~-ttd~~~ 80 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVGLVTGACLAD---IGHDVFCLDVDQAKIDILNNGGVPIHEPG-LKEVIARNRSAGRLRF-STDIEA 80 (478)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTTCCSSCCTT-HHHHHHHHHHTTCEEE-ECCHHH
T ss_pred CCCceEEEECcCHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHCCCCCcCCCC-HHHHHHHhcccCCEEE-ECCHHH
Confidence 35689999999998875 566776 578999999999988876653100 01 1 124544 233322
Q ss_pred cccCCCCcceEEeccccC-------ChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 197 VKEKLGEYDCIILAALAG-------NEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 197 l~~dL~~FDvVfiaALVg-------m~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
...+.|+||+.---. .......+++.+.+.++||.+|+..+
T Consensus 81 ---a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 81 ---AVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp ---HHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred ---HhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 123579999862210 02467888999999999999887765
No 408
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.51 E-value=0.027 Score=54.29 Aligned_cols=48 Identities=17% Similarity=0.088 Sum_probs=40.9
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcC
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDD 181 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG 181 (535)
.+++.|||..||. |.|++...+ .|.+++|+|+++.+++.|++.++..|
T Consensus 211 ~~~~~vlD~f~Gs-Gtt~~~a~~---~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 211 NPNDLVLDCFMGS-GTTAIVAKK---LGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CTTCEEEESSCTT-CHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCCEEEECCCCC-CHHHHHHHH---cCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 6889999999995 788777666 58999999999999999999998766
No 409
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.51 E-value=0.052 Score=50.26 Aligned_cols=95 Identities=8% Similarity=-0.009 Sum_probs=65.6
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc----cCCCCcceEE
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK----EKLGEYDCII 208 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~----~dL~~FDvVf 208 (535)
++|+-+|+|.+|........ ..|..|+.+|.|++.++... +..| +.++.||+.+.. .....+|+|+
T Consensus 1 M~iiIiG~G~~G~~la~~L~--~~g~~v~vid~~~~~~~~l~---~~~~-----~~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSML--SRKYGVVIINKDRELCEEFA---KKLK-----ATIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHH--HTTCCEEEEESCHHHHHHHH---HHSS-----SEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHHH--hCCCeEEEEECCHHHHHHHH---HHcC-----CeEEEcCCCCHHHHHhcCcccCCEEE
Confidence 57999999987766544333 25789999999999876432 2334 478899987532 1346799999
Q ss_pred eccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 209 LAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 209 iaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+...- .....++....+.+.|...+++|.
T Consensus 71 ~~~~~---d~~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 71 ILTPR---DEVNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp ECCSC---HHHHHHHHHHHHHTSCCCEEEECC
T ss_pred EecCC---cHHHHHHHHHHHHHcCCCeEEEEE
Confidence 76433 344556666777777888888876
No 410
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.49 E-value=0.033 Score=55.84 Aligned_cols=103 Identities=21% Similarity=0.246 Sum_probs=61.1
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHH-HHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANN-LARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIe-lAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
++++|.-||+|.+|++........-...+|+.+|++++.++ .+..+..... +..++++..+| ...+.+.|+|++
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~-~~~~~~i~~~~----~~a~~~aDvVii 80 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP-FMGQMSLYAGD----YSDVKDCDVIVV 80 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC-CTTCEEEC--C----GGGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH-hcCCeEEEECC----HHHhCCCCEEEE
Confidence 46899999999999987665542222348999999987665 3444444332 23466666444 223567899999
Q ss_pred ccccCChhh-------------HHHHHHHHHhhcccCeEEEEE
Q 041205 210 AALAGNEEE-------------KAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 210 aALVgm~ed-------------K~~VL~eL~rvLKPGGvLVvR 239 (535)
.+.+...+. -..+.+.+.++ .|+|.+++-
T Consensus 81 ~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (318)
T 1y6j_A 81 TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV 122 (318)
T ss_dssp CCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred cCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 876632111 14455555555 689988884
No 411
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=95.49 E-value=0.0065 Score=60.44 Aligned_cols=100 Identities=11% Similarity=0.088 Sum_probs=60.5
Q ss_pred HhhCCCCCCEEEEEcc-CCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc--CC
Q 041205 125 ENTGVAQLKKVAFVGS-GPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE--KL 201 (535)
Q Consensus 125 ~~~~l~~pkRVLeIGS-GplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~--dL 201 (535)
....+.++++||-+|+ |++|..++.+|+ +..+++|++++ +++..+.++ +| ...-+. ...|..+... ..
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~-~~g~~~V~~~~-~~~~~~~~~-----~g-a~~~~~-~~~~~~~~~~~~~~ 206 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCS-TVPNVTVFGTA-STFKHEAIK-----DS-VTHLFD-RNADYVQEVKRISA 206 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHT-TSTTCEEEEEE-CGGGHHHHG-----GG-SSEEEE-TTSCHHHHHHHHCT
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHH-HcCCcEEEEeC-CHHHHHHHH-----cC-CcEEEc-CCccHHHHHHHhcC
Confidence 3456789999999998 999999999998 34468999998 555444433 45 211111 1111111111 11
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+.||+||-...- ..+....+.|+|||++++-.
T Consensus 207 ~g~Dvv~d~~g~-------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 207 EGVDIVLDCLCG-------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp TCEEEEEEECC--------------CTTEEEEEEEEEEC
T ss_pred CCceEEEECCCc-------hhHHHHHHHhhcCCEEEEEC
Confidence 469999964322 12367889999999998754
No 412
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.41 E-value=0.022 Score=58.26 Aligned_cols=93 Identities=16% Similarity=0.141 Sum_probs=62.4
Q ss_pred CCCEEEEEccCCChhhH-HHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 131 QLKKVAFVGSGPMPLTS-IILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTA-I~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
..++|.+||+|.+|.+- ..|++ .|..|+++|++++.++... ..| . . ...+..++.......|+||+
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~---~G~~V~v~dr~~~~~~~l~----~~g-~----~-~~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRK---GGHECVVYDLNVNAVQALE----REG-I----A-GARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHH----TTT-C----B-CCSSHHHHHHHSCSSCEEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHHH----HCC-C----E-EeCCHHHHHhcCCCCCEEEE
Confidence 45899999999888763 33444 5789999999998876544 235 2 1 12344443333344699998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
.--. ..-..++..+...++||.+|+--
T Consensus 88 ~vp~---~~v~~vl~~l~~~l~~g~iiId~ 114 (358)
T 4e21_A 88 MVPA---AVVDSMLQRMTPLLAANDIVIDG 114 (358)
T ss_dssp CSCG---GGHHHHHHHHGGGCCTTCEEEEC
T ss_pred eCCH---HHHHHHHHHHHhhCCCCCEEEeC
Confidence 5332 25677889999999998877653
No 413
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.38 E-value=0.081 Score=53.43 Aligned_cols=105 Identities=18% Similarity=0.192 Sum_probs=65.8
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHH-HHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNL-ARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIel-AR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
.+.+||.-||+|.+|++...+.....-..+++-+|++++.++- +..+..... +..++++..++- ..+.+.|+|+
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~-~~~~~~i~~~~~----~a~~~aDvVi 81 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALP-FTSPKKIYSAEY----SDAKDADLVV 81 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG-GSCCCEEEECCG----GGGGGCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHH-hcCCeEEEECCH----HHhCCCCEEE
Confidence 5668999999999999876654422223589999999987643 555554433 335677765442 2346789999
Q ss_pred eccccCChh-----hH----HHHHHHHHhhc---ccCeEEEEE
Q 041205 209 LAALAGNEE-----EK----AKILGHIRKYM---KEGGVLLVR 239 (535)
Q Consensus 209 iaALVgm~e-----dK----~~VL~eL~rvL---KPGGvLVvR 239 (535)
+.+.+...+ +. ..++.++.+.+ .|+|.+++-
T Consensus 82 i~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 124 (326)
T 2zqz_A 82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA 124 (326)
T ss_dssp ECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 987763211 11 13444444322 688888774
No 414
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.34 E-value=0.052 Score=53.24 Aligned_cols=90 Identities=11% Similarity=0.019 Sum_probs=60.6
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
-.+++|+.||+|.+|......++. .|.+|+++|.+++..+.+. ..| . ++.. ..++...+..+|+|++
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~--~G~~V~~~dr~~~~~~~~~----~~g-~----~~~~--~~~l~~~l~~aDvVi~ 219 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAA--LGAKVKVGARESDLLARIA----EMG-M----EPFH--ISKAAQELRDVDVCIN 219 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHH----HTT-S----EEEE--GGGHHHHTTTCSEEEE
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHH----HCC-C----eecC--hhhHHHHhcCCCEEEE
Confidence 468999999999998888777763 5789999999987654432 345 2 2221 1122233467999998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
..-.++... ...+.|+||++|+-
T Consensus 220 ~~p~~~i~~------~~l~~mk~~~~lin 242 (293)
T 3d4o_A 220 TIPALVVTA------NVLAEMPSHTFVID 242 (293)
T ss_dssp CCSSCCBCH------HHHHHSCTTCEEEE
T ss_pred CCChHHhCH------HHHHhcCCCCEEEE
Confidence 766555222 23447899987754
No 415
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.30 E-value=0.033 Score=55.74 Aligned_cols=97 Identities=20% Similarity=0.282 Sum_probs=64.5
Q ss_pred CCCCEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..-++|.+||+|.+|.+ |..++ .|..|+.+|++++.++.+.+.+...- -.++++. .|.. ...+.|+|+
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la----aG~~V~v~d~~~~~~~~~~~~l~~~~--~~~i~~~-~~~~----~~~~aDlVi 78 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA----SKHEVVLQDVSEKALEAAREQIPEEL--LSKIEFT-TTLE----KVKDCDIVM 78 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH----TTSEEEEECSCHHHHHHHHHHSCGGG--GGGEEEE-SSCT----TGGGCSEEE
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH----cCCEEEEEECCHHHHHHHHHHHHHHH--hCCeEEe-CCHH----HHcCCCEEE
Confidence 34689999999988765 23332 47799999999999998887621111 1245542 3332 245689999
Q ss_pred eccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 209 LAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 209 iaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.+.... ..-|..++.++... ||.+++..+
T Consensus 79 eavpe~-~~vk~~l~~~l~~~--~~~Ilasnt 107 (293)
T 1zej_A 79 EAVFED-LNTKVEVLREVERL--TNAPLCSNT 107 (293)
T ss_dssp ECCCSC-HHHHHHHHHHHHTT--CCSCEEECC
T ss_pred EcCcCC-HHHHHHHHHHHhcC--CCCEEEEEC
Confidence 863332 34478888888775 888887654
No 416
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.29 E-value=0.046 Score=53.70 Aligned_cols=90 Identities=13% Similarity=0.025 Sum_probs=60.7
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
-.+++|+.||+|.+|......+.. .|.+|+++|.+++..+.+. ..| . +.... .++...+..+|+|++
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~--~G~~V~~~d~~~~~~~~~~----~~g-~----~~~~~--~~l~~~l~~aDvVi~ 221 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAA--LGANVKVGARSSAHLARIT----EMG-L----VPFHT--DELKEHVKDIDICIN 221 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHH----HTT-C----EEEEG--GGHHHHSTTCSEEEE
T ss_pred CCCCEEEEEcccHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHH----HCC-C----eEEch--hhHHHHhhCCCEEEE
Confidence 468999999999999888777763 5789999999987654432 245 2 22211 122233467999998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
....++.. + ...+.|+||++|+-
T Consensus 222 ~~p~~~i~-~-----~~~~~mk~g~~lin 244 (300)
T 2rir_A 222 TIPSMILN-Q-----TVLSSMTPKTLILD 244 (300)
T ss_dssp CCSSCCBC-H-----HHHTTSCTTCEEEE
T ss_pred CCChhhhC-H-----HHHHhCCCCCEEEE
Confidence 76666522 1 23467999987754
No 417
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.22 E-value=0.086 Score=52.73 Aligned_cols=102 Identities=19% Similarity=0.194 Sum_probs=65.5
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHH-HHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEecc
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANN-LARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAA 211 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIe-lAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaA 211 (535)
+||.-||+|.+|++............+++-+|++++.++ .+..+..... +..++++..+|- ..+.+.|+|++.+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~-~~~~~~v~~~~~----~a~~~aD~Vii~a 75 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP-FAHPVWVWAGSY----GDLEGARAVVLAA 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGG-GSCCCEEEECCG----GGGTTEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHh-hcCCeEEEECCH----HHhCCCCEEEECC
Confidence 489999999999987766543223468999999998776 3666655443 335667765442 2356789999987
Q ss_pred ccC----C-hhhH----HHHHHHHHhhc---ccCeEEEEE
Q 041205 212 LAG----N-EEEK----AKILGHIRKYM---KEGGVLLVR 239 (535)
Q Consensus 212 LVg----m-~edK----~~VL~eL~rvL---KPGGvLVvR 239 (535)
.+. | ..+. ..++.++.+.+ .|+|.+++-
T Consensus 76 g~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 115 (310)
T 2xxj_A 76 GVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA 115 (310)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred CCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe
Confidence 663 2 1111 33444443322 788888774
No 418
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.20 E-value=0.024 Score=59.83 Aligned_cols=104 Identities=17% Similarity=0.214 Sum_probs=68.3
Q ss_pred CCCEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHHHh---hcCC--------cCCCeEEEEccccccc
Q 041205 131 QLKKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRIVS---SDDE--------IEKRMKFLTCDIMEVK 198 (535)
Q Consensus 131 ~pkRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~---~lG~--------Ls~rI~Fi~GDA~el~ 198 (535)
..-||.+||.|-+|++ |.+||+ .|-.|+++|+|++.++.-++-.. .-|. ...+++| +.|..+.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~---~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea- 81 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSD---FGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEG- 81 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHH-
T ss_pred CceEEEEEcCCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHH-
Confidence 4579999999998876 556776 57899999999998876544100 0010 0134555 3443222
Q ss_pred cCCCCcceEEeccccCC--------hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 199 EKLGEYDCIILAALAGN--------EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 199 ~dL~~FDvVfiaALVgm--------~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
..+.|+||+.---.. ...-..+++.+.+.|++|.+++..+.
T Consensus 82 --~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ST 130 (446)
T 4a7p_A 82 --VKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKST 130 (446)
T ss_dssp --HTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSC
T ss_pred --HhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 246799998621110 11367888999999999999988763
No 419
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.17 E-value=0.079 Score=49.43 Aligned_cols=96 Identities=11% Similarity=0.106 Sum_probs=63.5
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc----cCCCCcc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK----EKLGEYD 205 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~----~dL~~FD 205 (535)
...++|+-+|+|.+|........ ..|. |+.+|.|++.++.++ .| +.++.||+.+.. .....+|
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~--~~g~-v~vid~~~~~~~~~~-----~~-----~~~i~gd~~~~~~l~~a~i~~ad 73 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELR--GSEV-FVLAEDENVRKKVLR-----SG-----ANFVHGDPTRVSDLEKANVRGAR 73 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHST--TSEE-EEEESCGGGHHHHHH-----TT-----CEEEESCTTCHHHHHHTTCTTCS
T ss_pred CCCCEEEEECCChHHHHHHHHHH--hCCe-EEEEECCHHHHHHHh-----cC-----CeEEEcCCCCHHHHHhcCcchhc
Confidence 34679999999876544333222 2366 999999999876554 34 578999987432 1356799
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
+|++...- ...........+.+.|+..++++-.
T Consensus 74 ~vi~~~~~---d~~n~~~~~~a~~~~~~~~iia~~~ 106 (234)
T 2aef_A 74 AVIVDLES---DSETIHCILGIRKIDESVRIIAEAE 106 (234)
T ss_dssp EEEECCSC---HHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred EEEEcCCC---cHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 99986433 3444555666777899888888753
No 420
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.15 E-value=0.054 Score=51.58 Aligned_cols=88 Identities=16% Similarity=0.061 Sum_probs=57.8
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEeccc
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAAL 212 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaAL 212 (535)
++|..||+|.+|..-..... . |.+|+.+|++++..+...+. | . . +.. ..+ ....+|+|++..-
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~--~-g~~V~~~~~~~~~~~~~~~~----g-~--~--~~~--~~~---~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLA--R-RFPTLVWNRTFEKALRHQEE----F-G--S--EAV--PLE---RVAEARVIFTCLP 64 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHH--T-TSCEEEECSSTHHHHHHHHH----H-C--C--EEC--CGG---GGGGCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHHh--C-CCeEEEEeCCHHHHHHHHHC----C-C--c--ccC--HHH---HHhCCCEEEEeCC
Confidence 47999999998876443333 3 77899999999877655432 5 2 1 111 112 1246899998633
Q ss_pred cCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 213 AGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 213 Vgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
.. ..-..+++.+.+.+++|.+|+.-
T Consensus 65 ~~--~~~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 65 TT--REVYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp SH--HHHHHHHHHHTTTCCTTEEEEEC
T ss_pred Ch--HHHHHHHHHHHhhCCCCCEEEEC
Confidence 21 12556788888889999877754
No 421
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.07 E-value=0.09 Score=53.43 Aligned_cols=103 Identities=18% Similarity=0.189 Sum_probs=71.0
Q ss_pred CCCEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh-------cCCcC---------CCeEEEEcc
Q 041205 131 QLKKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRIVSS-------DDEIE---------KRMKFLTCD 193 (535)
Q Consensus 131 ~pkRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~-------lG~Ls---------~rI~Fi~GD 193 (535)
...+|.-||+|.+|-. |.++|. .|..|+-+|+++++++.|++.+++ .|.+. .+|++. .|
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~---~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~ 80 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFAS---GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TN 80 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CC
T ss_pred CCCeEEEECCcHHHHHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cc
Confidence 4579999999988765 333444 689999999999999988776543 12111 134442 22
Q ss_pred ccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 194 IMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 194 A~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
. ...+.+.|+|+= +...-.+-|.++|.++-++++|+.+|...+.
T Consensus 81 l---~~a~~~ad~ViE-av~E~l~iK~~lf~~l~~~~~~~aIlaSNTS 124 (319)
T 3ado_A 81 L---AEAVEGVVHIQE-CVPENLDLKRKIFAQLDSIVDDRVVLSSSSS 124 (319)
T ss_dssp H---HHHTTTEEEEEE-CCCSCHHHHHHHHHHHHTTCCSSSEEEECCS
T ss_pred h---HhHhccCcEEee-ccccHHHHHHHHHHHHHHHhhhcceeehhhh
Confidence 2 223456788764 3444357899999999999999999988764
No 422
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.06 E-value=0.11 Score=52.77 Aligned_cols=105 Identities=17% Similarity=0.263 Sum_probs=73.0
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCC-------------------cCCCeEEE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDE-------------------IEKRMKFL 190 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~-------------------Ls~rI~Fi 190 (535)
.+...|+.+||| +-..+..+... .++.+++-||. |+.++.-++++...+. ..++..++
T Consensus 96 ~~~~qVV~LGaG-lDTr~~RL~~~-~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v 172 (334)
T 1rjd_A 96 NEKVQVVNLGCG-SDLRMLPLLQM-FPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLA 172 (334)
T ss_dssp CSSEEEEEETCT-TCCTHHHHHHH-CTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEE
T ss_pred CCCcEEEEeCCC-CccHHHHhcCc-CCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEE
Confidence 457899999999 67888888652 45778888888 9999999999887531 13678999
Q ss_pred Eccccccc------cCC---CCcceEEeccccC-C-hhhHHHHHHHHHhhcccCeEEEE
Q 041205 191 TCDIMEVK------EKL---GEYDCIILAALAG-N-EEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 191 ~GDA~el~------~dL---~~FDvVfiaALVg-m-~edK~~VL~eL~rvLKPGGvLVv 238 (535)
.+|..+.. ... +...+++...+.. + .+.-.++++.+.... |||.+++
T Consensus 173 ~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~ 230 (334)
T 1rjd_A 173 ACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWIS 230 (334)
T ss_dssp ECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEE
T ss_pred ecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEE
Confidence 99987631 111 2245555555443 2 566778888888876 6666653
No 423
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.03 E-value=0.06 Score=54.87 Aligned_cols=98 Identities=11% Similarity=0.142 Sum_probs=64.2
Q ss_pred CCEEEEEccCCChhhH-HHHHhhcCCCcEEEEEeCChhHHHHHHHHHh---hcCC--cCCCeEEEEccccccccCCCCcc
Q 041205 132 LKKVAFVGSGPMPLTS-IILASQHMKSTHFDNIDIDETANNLARRIVS---SDDE--IEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 132 pkRVLeIGSGplPlTA-I~LAk~~l~Ga~VtGIDIDpeAIelAR~li~---~lG~--Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
.++|..||+|.+|.+- ..|++ .|..|+.+|++++.++..++.-. .++. +..++.+ +.|..+ ...+.|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~---~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~e---a~~~aD 101 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR---KGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKA---SLEGVT 101 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT---TTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHH---HHTTCC
T ss_pred CCeEEEECccHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHH---HHhcCC
Confidence 5799999999988763 33444 57789999999988776554311 1110 2234444 233322 224689
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+|+++--. .....+++.+.+.++||.+++.-
T Consensus 102 vVilaVp~---~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 102 DILIVVPS---FAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp EEEECCCH---HHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EEEECCCH---HHHHHHHHHHHHhcCCCCEEEEE
Confidence 99986322 46788899999999998876543
No 424
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.99 E-value=0.11 Score=52.10 Aligned_cols=104 Identities=15% Similarity=0.178 Sum_probs=63.2
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHH-HHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNL-ARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIel-AR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.+++|.-||+|.+|++........-...+|+.+|++++.++- +..+......+..++++..++. ..+.+.|+|++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~----~a~~~aDvVvi 80 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEY----SDCHDADLVVI 80 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCG----GGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCH----HHhCCCCEEEE
Confidence 468999999999988866654321123589999999876652 4444333221224566665432 23467899999
Q ss_pred ccccCChh-------------hHHHHHHHHHhhcccCeEEEEE
Q 041205 210 AALAGNEE-------------EKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 210 aALVgm~e-------------dK~~VL~eL~rvLKPGGvLVvR 239 (535)
.+.++..+ --..+...+.++ .|+|.+++-
T Consensus 81 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (317)
T 3d0o_A 81 CAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVA 122 (317)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEEC
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 87663211 112233344444 789988884
No 425
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.90 E-value=0.048 Score=45.80 Aligned_cols=95 Identities=16% Similarity=0.159 Sum_probs=59.2
Q ss_pred CCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccc--c--CCCCcceE
Q 041205 132 LKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVK--E--KLGEYDCI 207 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~--~--dL~~FDvV 207 (535)
.++|+-+|+|.+|......... .|.+|+.+|.+++..+.. ...| ..++.+|..+.. . ...++|+|
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~--~g~~v~~~d~~~~~~~~~----~~~~-----~~~~~~d~~~~~~l~~~~~~~~d~v 74 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR--MGHEVLAVDINEEKVNAY----ASYA-----THAVIANATEENELLSLGIRNFEYV 74 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCCEEEESCHHHHHTT----TTTC-----SEEEECCTTCHHHHHTTTGGGCSEE
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHH----HHhC-----CEEEEeCCCCHHHHHhcCCCCCCEE
Confidence 5689999999887776555442 578899999998765432 2223 356778765421 1 13569999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+...... .+....+....+.+.++ .++++.
T Consensus 75 i~~~~~~--~~~~~~~~~~~~~~~~~-~ii~~~ 104 (144)
T 2hmt_A 75 IVAIGAN--IQASTLTTLLLKELDIP-NIWVKA 104 (144)
T ss_dssp EECCCSC--HHHHHHHHHHHHHTTCS-EEEEEC
T ss_pred EECCCCc--hHHHHHHHHHHHHcCCC-eEEEEe
Confidence 9864331 13333455556667776 666554
No 426
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.88 E-value=0.066 Score=53.24 Aligned_cols=92 Identities=10% Similarity=0.131 Sum_probs=58.2
Q ss_pred CCEEEEEccCCChhhHH-HHHhhcCCC-cEEEEEeCChhHHHHHHH---HHhhcCCcCCCeEEEEc-cccccccCCCCcc
Q 041205 132 LKKVAFVGSGPMPLTSI-ILASQHMKS-THFDNIDIDETANNLARR---IVSSDDEIEKRMKFLTC-DIMEVKEKLGEYD 205 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI-~LAk~~l~G-a~VtGIDIDpeAIelAR~---li~~lG~Ls~rI~Fi~G-DA~el~~dL~~FD 205 (535)
.++|.+||+|.+|.+.. .|++ .| ..|+++|++++..+.+.. .+...| . .. +..++. ...|
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~---~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g-~-------~~~s~~e~~---~~aD 89 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGG---RNAARLAAYDLRFNDPAASGALRARAAELG-V-------EPLDDVAGI---ACAD 89 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TTCSEEEEECGGGGCTTTHHHHHHHHHHTT-C-------EEESSGGGG---GGCS
T ss_pred CCeEEEECccHHHHHHHHHHHH---cCCCeEEEEeCCCccccchHHHHHHHHHCC-C-------CCCCHHHHH---hcCC
Confidence 47999999998887643 3333 57 799999999842222222 223345 2 23 333322 4579
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+||+.--- ..-.+.+..+.+.++||.+|+--+
T Consensus 90 vVi~avp~---~~~~~~~~~i~~~l~~~~ivv~~s 121 (317)
T 4ezb_A 90 VVLSLVVG---AATKAVAASAAPHLSDEAVFIDLN 121 (317)
T ss_dssp EEEECCCG---GGHHHHHHHHGGGCCTTCEEEECC
T ss_pred EEEEecCC---HHHHHHHHHHHhhcCCCCEEEECC
Confidence 99986333 334556788999999998876544
No 427
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.86 E-value=0.086 Score=51.69 Aligned_cols=99 Identities=23% Similarity=0.257 Sum_probs=61.1
Q ss_pred CCEEEEEccCCChhhHH-HHHhhcCCCcEEEEEeCChhHHHHHHHHHhh--cCC-cC--CCeEEEEccccccccCCCCcc
Q 041205 132 LKKVAFVGSGPMPLTSI-ILASQHMKSTHFDNIDIDETANNLARRIVSS--DDE-IE--KRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI-~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~--lG~-Ls--~rI~Fi~GDA~el~~dL~~FD 205 (535)
.++|+.||+|.+|..-. .|++ .|..|+.+|.+++.++..++.... .+. +. .++.....|..+. ..++|
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~D 77 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLAL---KGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---VKDAD 77 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---HTTCS
T ss_pred cCeEEEECCCHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---HhcCC
Confidence 47999999998876533 3333 578899999999887655443100 010 00 0110112232221 24689
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+|+++.-. ..-..+++.+.+.+++|.+++.-
T Consensus 78 ~vi~~v~~---~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 78 VILIVVPA---IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EEEECSCG---GGHHHHHHHHGGGCCTTCEEEES
T ss_pred EEEEeCCc---hHHHHHHHHHHHhCCCCCEEEEc
Confidence 99996433 34478889999999999877665
No 428
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.83 E-value=0.1 Score=55.75 Aligned_cols=104 Identities=17% Similarity=0.255 Sum_probs=66.7
Q ss_pred CCCCEEEEEccCCChhh-HHHHHhhcCCCc-EEEEEeCChh----HHHHHHHHHh-----hcCC--------cCCCeEEE
Q 041205 130 AQLKKVAFVGSGPMPLT-SIILASQHMKST-HFDNIDIDET----ANNLARRIVS-----SDDE--------IEKRMKFL 190 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlT-AI~LAk~~l~Ga-~VtGIDIDpe----AIelAR~li~-----~lG~--------Ls~rI~Fi 190 (535)
.+-++|..||+|.+|.+ |.+||+ .+|- .|+++|+|++ .++.-++-.. .-|. ...++.+
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~--~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~- 92 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFAD--APCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC- 92 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHH--STTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE-
T ss_pred CCCCEEEEECcCHHHHHHHHHHHH--hCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE-
Confidence 45689999999999986 456666 1377 9999999999 7655443100 0000 0235655
Q ss_pred EccccccccCCCCcceEEeccccCC---------hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 191 TCDIMEVKEKLGEYDCIILAALAGN---------EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 191 ~GDA~el~~dL~~FDvVfiaALVgm---------~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+.|. + ...+.|+||++---.. ...-....+.+.+.++||.+++..+
T Consensus 93 ttd~-e---a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 147 (478)
T 3g79_A 93 TPDF-S---RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLES 147 (478)
T ss_dssp ESCG-G---GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECS
T ss_pred eCcH-H---HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 3342 2 2346799998632211 1224567788999999999888776
No 429
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.80 E-value=0.012 Score=73.55 Aligned_cols=105 Identities=22% Similarity=0.194 Sum_probs=54.3
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCC----CcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc-ccCCCCc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMK----STHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV-KEKLGEY 204 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~----Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el-~~dL~~F 204 (535)
.+..||||||.|+++.|.-++.. +.. -...+-.|+++...+.|++.++.+. |+.-.-|..+. .+....|
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~-l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d-----i~~~~~d~~~~~~~~~~~y 1312 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPAL-LNTQPVMDLDYTATDRNPQALEAAQAKLEQLH-----VTQGQWDPANPAPGSLGKA 1312 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHH-TTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT-----EEEECCCSSCCCC-----C
T ss_pred CCCceEEEECCCccHHHHHHHHh-hcccCcccceEEEecCChHHHHHHHHHhhhcc-----cccccccccccccCCCCce
Confidence 45789999999988877766543 211 1367888999988888887776543 33311122111 1123469
Q ss_pred ceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 205 DCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 205 DvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|+|+....+|..++....+.++++.|+|||.+++..
T Consensus 1313 dlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1313 DLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp CEEEEECC--------------------CCEEEEEE
T ss_pred eEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 999987665545677889999999999999998875
No 430
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.67 E-value=0.075 Score=51.51 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=59.1
Q ss_pred CEEEEEccCCChhhHHH-HHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEecc
Q 041205 133 KKVAFVGSGPMPLTSII-LASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAA 211 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~-LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaA 211 (535)
++|.+||+|.+|.+-.. +++ .|.+|+++|++++.++...+ .| + .+ ..|..++ ....|+||+.-
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~---~G~~V~~~d~~~~~~~~~~~----~g-~----~~-~~~~~~~---~~~aDvvi~~v 67 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLK---AGYLLNVFDLVQSAVDGLVA----AG-A----SA-ARSARDA---VQGADVVISML 67 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHH---TTCEEEEECSSHHHHHHHHH----TT-C----EE-CSSHHHH---HTTCSEEEECC
T ss_pred CEEEEEeecHHHHHHHHHHHh---CCCeEEEEcCCHHHHHHHHH----CC-C----eE-cCCHHHH---HhCCCeEEEEC
Confidence 68999999999876433 333 57899999999988765543 25 2 22 2333222 24589999863
Q ss_pred ccCChhhHHHHHH---HHHhhcccCeEEEEEc
Q 041205 212 LAGNEEEKAKILG---HIRKYMKEGGVLLVRS 240 (535)
Q Consensus 212 LVgm~edK~~VL~---eL~rvLKPGGvLVvRs 240 (535)
-.. ..-..++. .+.+.++||.+++.-+
T Consensus 68 p~~--~~~~~v~~~~~~~~~~l~~~~~vi~~s 97 (302)
T 2h78_A 68 PAS--QHVEGLYLDDDGLLAHIAPGTLVLECS 97 (302)
T ss_dssp SCH--HHHHHHHHSSSCGGGSSCSSCEEEECS
T ss_pred CCH--HHHHHHHcCchhHHhcCCCCcEEEECC
Confidence 231 23456666 7777889988776543
No 431
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=94.65 E-value=0.091 Score=58.59 Aligned_cols=99 Identities=22% Similarity=0.214 Sum_probs=66.5
Q ss_pred CEEEEEccCCChhhH-HHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh-------cCCc--------CCCeEEEEccccc
Q 041205 133 KKVAFVGSGPMPLTS-IILASQHMKSTHFDNIDIDETANNLARRIVSS-------DDEI--------EKRMKFLTCDIME 196 (535)
Q Consensus 133 kRVLeIGSGplPlTA-I~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~-------lG~L--------s~rI~Fi~GDA~e 196 (535)
++|..||+|.+|.+- ..+|. .|..|+.+|++++.++.++..++. .|.+ ..++++. .|.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~---aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~-- 386 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALIL---SNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGS-LDY-- 386 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHT---TTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEE-SSS--
T ss_pred cEEEEEcCCHhhHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEe-CCH--
Confidence 579999999888653 33444 578999999999999887654321 1201 1245542 332
Q ss_pred cccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 197 VKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 197 l~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
....+.|+|+.+- .....-|..++.++.+.++||.+|+..+
T Consensus 387 --~~~~~aDlVIeaV-pe~~~vk~~v~~~l~~~~~~~~Ilasnt 427 (725)
T 2wtb_A 387 --ESFRDVDMVIEAV-IENISLKQQIFADLEKYCPQHCILASNT 427 (725)
T ss_dssp --GGGTTCSEEEECC-CSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred --HHHCCCCEEEEcC-cCCHHHHHHHHHHHHhhCCCCcEEEeCC
Confidence 2346789999863 3213448899999999999999886654
No 432
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.63 E-value=0.12 Score=51.15 Aligned_cols=101 Identities=13% Similarity=0.150 Sum_probs=62.0
Q ss_pred CCCEEEEEccCCChhhHH-HHHhhcCCCcEEEEEeCChhHHHHHHHH-HhhcCC---cCCCeEEEEccccccccCCCCcc
Q 041205 131 QLKKVAFVGSGPMPLTSI-ILASQHMKSTHFDNIDIDETANNLARRI-VSSDDE---IEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI-~LAk~~l~Ga~VtGIDIDpeAIelAR~l-i~~lG~---Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
..++|+.||+|.+|.+-- .|++ .|..|+.+ .+++.++..++. +...+. +..++.+ ..|. ....++|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~---~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~-~~~~----~~~~~~D 88 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR---AGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSA-SSDP----SAVQGAD 88 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH---TTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEE-ESCG----GGGTTCS
T ss_pred cCCcEEEECcCHHHHHHHHHHHH---CCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeee-eCCH----HHcCCCC
Confidence 368999999998886543 3444 57789999 998877766542 110010 0011111 1222 2235799
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEccccc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGA 244 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~Gl 244 (535)
+|+++ ... .+-..+++.+.+.++|+.+++.- ..|+
T Consensus 89 ~vila-vk~--~~~~~~l~~l~~~l~~~~~iv~~-~nGi 123 (318)
T 3hwr_A 89 LVLFC-VKS--TDTQSAALAMKPALAKSALVLSL-QNGV 123 (318)
T ss_dssp EEEEC-CCG--GGHHHHHHHHTTTSCTTCEEEEE-CSSS
T ss_pred EEEEE-ccc--ccHHHHHHHHHHhcCCCCEEEEe-CCCC
Confidence 99996 332 46688999999999999876654 3453
No 433
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.62 E-value=0.17 Score=50.86 Aligned_cols=100 Identities=21% Similarity=0.160 Sum_probs=63.7
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHHHHHhh----cCCcCCCeEEEEccccccccCCCCcc
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLARRIVSS----DDEIEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR~li~~----lG~Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
+.++|.-||+|.+|++...+... .|- .|+.+|+|++.++.....+.. .+ ...++++ +.|. ..+.+.|
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~--~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~-~~~~i~~-t~d~----~al~~aD 74 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQ--KNLGDVVLFDIVKNMPHGKALDTSHTNVMAY-SNCKVSG-SNTY----DDLAGAD 74 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSSSHHHHHHHHHHTHHHHHT-CCCCEEE-ECCG----GGGTTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHHHhhhhhcC-CCcEEEE-CCCH----HHhCCCC
Confidence 45799999999999875544432 343 699999999987753333332 22 2234443 2443 3346789
Q ss_pred eEEeccccC----Ch--------------hhHHHHHHHHHhhcccCeEEEEE
Q 041205 206 CIILAALAG----NE--------------EEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 206 vVfiaALVg----m~--------------edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+|++.+... +. +-+..+++.+.++. |++.+++-
T Consensus 75 ~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 125 (322)
T 1t2d_A 75 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVV 125 (322)
T ss_dssp EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 999886431 11 23677778888775 88887653
No 434
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.59 E-value=0.036 Score=56.58 Aligned_cols=89 Identities=11% Similarity=0.116 Sum_probs=58.9
Q ss_pred CCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccC-CCCcceEEec
Q 041205 132 LKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEK-LGEYDCIILA 210 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~d-L~~FDvVfia 210 (535)
.++|.+||+|.+|.+-...... .|.+|+++|.+++..+.++ ..| . .. ..|..++... ....|+||++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~--~G~~V~~~dr~~~~~~~a~----~~G-~----~~-~~~~~e~~~~a~~~aDlVila 75 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHA--ANHSVFGYNRSRSGAKSAV----DEG-F----DV-SADLEATLQRAAAEDALIVLA 75 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH--TTCCEEEECSCHHHHHHHH----HTT-C----CE-ESCHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEEeecHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHH----HcC-C----ee-eCCHHHHHHhcccCCCEEEEe
Confidence 4789999999988874433332 5789999999999887765 356 3 11 2343322211 1246999997
Q ss_pred cccCChhhHHHHHHHHHhhcccCeEE
Q 041205 211 ALAGNEEEKAKILGHIRKYMKEGGVL 236 (535)
Q Consensus 211 ALVgm~edK~~VL~eL~rvLKPGGvL 236 (535)
.-. .....+++++... +||.+|
T Consensus 76 vP~---~~~~~vl~~l~~~-~~~~iv 97 (341)
T 3ktd_A 76 VPM---TAIDSLLDAVHTH-APNNGF 97 (341)
T ss_dssp SCH---HHHHHHHHHHHHH-CTTCCE
T ss_pred CCH---HHHHHHHHHHHcc-CCCCEE
Confidence 544 4667888888875 887654
No 435
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.56 E-value=0.054 Score=52.96 Aligned_cols=92 Identities=17% Similarity=0.182 Sum_probs=58.9
Q ss_pred CCEEEEEccCCChhhHH-HHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 132 LKKVAFVGSGPMPLTSI-ILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI-~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
.++|.+||+|.+|.+-. .|++ .|..|+++|++++.++...+ .| . .....+..+ -....|+||+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~~~~----~g-~----~~~~~~~~e---~~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR---AGLSTWGADLNPQACANLLA----EG-A----CGAAASARE---FAGVVDALVIL 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHH----TT-C----SEEESSSTT---TTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHH---CCCeEEEEECCHHHHHHHHH----cC-C----ccccCCHHH---HHhcCCEEEEE
Confidence 47999999998887633 3444 57899999999988776543 35 2 112333332 22468999985
Q ss_pred cccCChhhHHHHH---HHHHhhcccCeEEEEEc
Q 041205 211 ALAGNEEEKAKIL---GHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 211 ALVgm~edK~~VL---~eL~rvLKPGGvLVvRs 240 (535)
---. ..-..++ +.+.+.++||.+++--+
T Consensus 72 vp~~--~~~~~v~~~~~~l~~~l~~g~ivv~~s 102 (303)
T 3g0o_A 72 VVNA--AQVRQVLFGEDGVAHLMKPGSAVMVSS 102 (303)
T ss_dssp CSSH--HHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred CCCH--HHHHHHHhChhhHHhhCCCCCEEEecC
Confidence 2221 1234444 66678889988876544
No 436
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.56 E-value=0.19 Score=50.00 Aligned_cols=98 Identities=19% Similarity=0.243 Sum_probs=59.0
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCc--EEEEEeCChhHHHHHHHHHh-hcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKST--HFDNIDIDETANNLARRIVS-SDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga--~VtGIDIDpeAIelAR~li~-~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
++|..||+|.+|.+....... .|. +|+.+|++++.++....-+. ... +.....+...|. ....+.|+|++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~--~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~~~~~i~~~d~----~~~~~aDvVii 73 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLM--KGFAREMVLIDVDKKRAEGDALDLIHGTP-FTRRANIYAGDY----ADLKGSDVVIV 73 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSSHHHHHHHHHHHHHHGG-GSCCCEEEECCG----GGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCeEEEEeCChHHHHHHHHHHHhhhh-hcCCcEEEeCCH----HHhCCCCEEEE
Confidence 489999999988875443321 344 89999999987765432222 111 112234433442 23467899999
Q ss_pred ccccCChh-------------hHHHHHHHHHhhcccCeEEEE
Q 041205 210 AALAGNEE-------------EKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 210 aALVgm~e-------------dK~~VL~eL~rvLKPGGvLVv 238 (535)
+.-.+..+ -+..+++.+.++ .|++.+++
T Consensus 74 av~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~ 114 (319)
T 1a5z_A 74 AAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIV 114 (319)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEE
Confidence 76653211 146667777766 47887665
No 437
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=94.55 E-value=0.063 Score=59.70 Aligned_cols=102 Identities=21% Similarity=0.260 Sum_probs=67.9
Q ss_pred CCCCEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhh-------cCCcC--------CCeEEEEcc
Q 041205 130 AQLKKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRIVSS-------DDEIE--------KRMKFLTCD 193 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~-------lG~Ls--------~rI~Fi~GD 193 (535)
.+-++|..||+|.+|.+ +..+++ .|..|+.+|++++.++.++..++. .|.+. .++++ +.|
T Consensus 312 ~~i~kV~VIGaG~MG~~iA~~la~---aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~-~~d 387 (715)
T 1wdk_A 312 KDVKQAAVLGAGIMGGGIAYQSAS---KGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP-TLS 387 (715)
T ss_dssp CCCSSEEEECCHHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE-ESS
T ss_pred ccCCEEEEECCChhhHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEE-ECC
Confidence 34578999999988865 344555 578899999999999887553321 23110 12443 223
Q ss_pred ccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 194 IMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 194 A~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
. ....+.|+|+.+- .....-|..++.++.+.++||.+|+..+
T Consensus 388 ~----~~~~~aDlVIeaV-~e~~~vk~~v~~~l~~~~~~~~Ilasnt 429 (715)
T 1wdk_A 388 Y----GDFGNVDLVVEAV-VENPKVKQAVLAEVENHVREDAILASNT 429 (715)
T ss_dssp S----TTGGGCSEEEECC-CSCHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred H----HHHCCCCEEEEcC-CCCHHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 2 2345689999863 3222448889999999999999886544
No 438
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.49 E-value=0.091 Score=55.54 Aligned_cols=101 Identities=14% Similarity=0.313 Sum_probs=65.1
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHH------------HhhcCCcCCCeEEEEcccccc
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRI------------VSSDDEIEKRMKFLTCDIMEV 197 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~l------------i~~lG~Ls~rI~Fi~GDA~el 197 (535)
..-++|..||+|.+|.+...... .|.+|+++|+|++.++..++- +.+ + ..++++ +.|..+
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La---~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~-~--~~~l~~-ttd~~e- 105 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIA---QNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAE-K--PLNFRA-TTDKHD- 105 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHH---TTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-S--CCCEEE-ESCHHH-
T ss_pred cCCCEEEEECcCHHHHHHHHHHH---cCCeEEEEecCHHHhhHHhccCCccccccHHHHHhh-c--cCCeEE-EcCHHH-
Confidence 34479999999998887544433 278999999999998876642 111 0 124554 334322
Q ss_pred ccCCCCcceEEeccccCCh--------hhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 198 KEKLGEYDCIILAALAGNE--------EEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 198 ~~dL~~FDvVfiaALVgm~--------edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
...+.|+||++---... ..-..+++.+.+ |+||.+++..+.
T Consensus 106 --a~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~ST 154 (432)
T 3pid_A 106 --AYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKST 154 (432)
T ss_dssp --HHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSC
T ss_pred --HHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCC
Confidence 22467999986222110 134667788888 999999987663
No 439
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.46 E-value=0.21 Score=49.22 Aligned_cols=99 Identities=15% Similarity=0.149 Sum_probs=58.3
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCC--cEEEEEeCChhHHHHHHH-HHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKS--THFDNIDIDETANNLARR-IVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~G--a~VtGIDIDpeAIelAR~-li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
++|..||+|.+|.+....... .| .+|+.+|++++.++.... +-.........+.+...|. ..+.+.|+|++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~--~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~----~~~~~aDvVii 75 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIA--QGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW----AALADADVVIS 75 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG----GGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH----HHhCCCCEEEE
Confidence 589999999988874433221 24 689999999987754332 2211110113455544553 23467899999
Q ss_pred ccccCCh----h-------------hHHHHHHHHHhhcccCeEEEE
Q 041205 210 AALAGNE----E-------------EKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 210 aALVgm~----e-------------dK~~VL~eL~rvLKPGGvLVv 238 (535)
+.-.... + -...++..+.++ .|++.+++
T Consensus 76 av~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~~~~~ii~ 120 (309)
T 1hyh_A 76 TLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVV 120 (309)
T ss_dssp CCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred ecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEE
Confidence 7554110 0 035666666665 46777665
No 440
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.38 E-value=0.19 Score=40.67 Aligned_cols=71 Identities=21% Similarity=0.187 Sum_probs=49.0
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCC-cEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccc---ccCCCCcce
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKS-THFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEV---KEKLGEYDC 206 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~G-a~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el---~~dL~~FDv 206 (535)
..++|+-+|+|.+|......... .| .+|+.+|++++..+... .. .+.++.+|..+. ...+.++|+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~--~g~~~v~~~~r~~~~~~~~~----~~-----~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT--SSNYSVTVADHDLAALAVLN----RM-----GVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH--CSSEEEEEEESCHHHHHHHH----TT-----TCEEEECCTTCHHHHHHHTTTCSE
T ss_pred CcCeEEEECCCHHHHHHHHHHHh--CCCceEEEEeCCHHHHHHHH----hC-----CCcEEEecCCCHHHHHHHHcCCCE
Confidence 45799999999877765544432 46 89999999998776544 22 356777877542 123357999
Q ss_pred EEeccc
Q 041205 207 IILAAL 212 (535)
Q Consensus 207 VfiaAL 212 (535)
|+..+.
T Consensus 73 vi~~~~ 78 (118)
T 3ic5_A 73 VISAAP 78 (118)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 998653
No 441
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.33 E-value=0.066 Score=51.48 Aligned_cols=90 Identities=18% Similarity=0.084 Sum_probs=57.6
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEeccc
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAAL 212 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaAL 212 (535)
++|..||+|.+|..-...... .|.+|+.+|.+++..+..++ .| + .+ ..|..+. ...+|+||+..-
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~~~~~~~~~~----~g-~----~~-~~~~~~~---~~~~D~vi~~v~ 70 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK--AGYSLVVSDRNPEAIADVIA----AG-A----ET-ASTAKAI---AEQCDVIITMLP 70 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH--TTCEEEEECSCHHHHHHHHH----TT-C----EE-CSSHHHH---HHHCSEEEECCS
T ss_pred ceEEEECchHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHH----CC-C----ee-cCCHHHH---HhCCCEEEEECC
Confidence 589999999998764433221 46789999999987765443 25 2 22 2333222 235899998633
Q ss_pred cCChhhHHHHH---HHHHhhcccCeEEEEE
Q 041205 213 AGNEEEKAKIL---GHIRKYMKEGGVLLVR 239 (535)
Q Consensus 213 Vgm~edK~~VL---~eL~rvLKPGGvLVvR 239 (535)
.. ..-..++ +.+.+.++||.+|+.-
T Consensus 71 ~~--~~~~~~~~~~~~l~~~l~~~~~vv~~ 98 (299)
T 1vpd_A 71 NS--PHVKEVALGENGIIEGAKPGTVLIDM 98 (299)
T ss_dssp SH--HHHHHHHHSTTCHHHHCCTTCEEEEC
T ss_pred CH--HHHHHHHhCcchHhhcCCCCCEEEEC
Confidence 21 2345566 5677889999877543
No 442
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.32 E-value=0.12 Score=51.27 Aligned_cols=92 Identities=15% Similarity=0.159 Sum_probs=59.8
Q ss_pred CCCEEEEEccCCChhhHH-HHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 131 QLKKVAFVGSGPMPLTSI-ILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI-~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
..++|.+||+|.+|.+-. .+++ .|..|+++|++++.++...+ .| +.+ ..+..++. ...|+||+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~l~~----~g-----~~~-~~~~~e~~---~~aDvVi~ 93 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE---AGYALQVWNRTPARAASLAA----LG-----ATI-HEQARAAA---RDADIVVS 93 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHT----TT-----CEE-ESSHHHHH---TTCSEEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHh---CCCeEEEEcCCHHHHHHHHH----CC-----CEe-eCCHHHHH---hcCCEEEE
Confidence 457999999999987643 3334 57899999999987655432 25 222 23433322 45799998
Q ss_pred ccccCChhhHHHHHH--HHHhhcccCeEEEEEc
Q 041205 210 AALAGNEEEKAKILG--HIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm~edK~~VL~--eL~rvLKPGGvLVvRs 240 (535)
.---. ..-..++. .+...++||.+|+--+
T Consensus 94 ~vp~~--~~~~~v~~~~~~~~~l~~~~~vi~~s 124 (320)
T 4dll_A 94 MLENG--AVVQDVLFAQGVAAAMKPGSLFLDMA 124 (320)
T ss_dssp CCSSH--HHHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred ECCCH--HHHHHHHcchhHHhhCCCCCEEEecC
Confidence 53221 23455565 6777889988876654
No 443
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.30 E-value=0.042 Score=52.96 Aligned_cols=94 Identities=16% Similarity=0.180 Sum_probs=55.9
Q ss_pred CCCEEEEEccCCChhhHH-HHHhhcCC-----C-cEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEE-------Ecc--c
Q 041205 131 QLKKVAFVGSGPMPLTSI-ILASQHMK-----S-THFDNIDIDETANNLARRIVSSDDEIEKRMKFL-------TCD--I 194 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI-~LAk~~l~-----G-a~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi-------~GD--A 194 (535)
.+++|++||+|.+|..-. .|++ . | .+|+.+|. ++.++..++ ..| + .+. ... +
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~---~~~~~~g~~~V~~~~r-~~~~~~l~~---~~g-~----~~~~~~~~~~~~~~~~ 74 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLAL---RAAATDGLLEVSWIAR-GAHLEAIRA---AGG-L----RVVTPSRDFLARPTCV 74 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH---HHHHTTSSEEEEEECC-HHHHHHHHH---HTS-E----EEECSSCEEEECCSEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHh---CccccCCCCCEEEEEc-HHHHHHHHh---cCC-e----EEEeCCCCeEEecceE
Confidence 347999999998875532 2333 3 6 78999998 654443332 134 1 111 000 1
Q ss_pred cccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 195 MEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 195 ~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
.+.......+|+||+. ... .+-..+++.+.+.++||.+++.-
T Consensus 75 ~~~~~~~~~~D~vil~-vk~--~~~~~v~~~i~~~l~~~~~iv~~ 116 (317)
T 2qyt_A 75 TDNPAEVGTVDYILFC-TKD--YDMERGVAEIRPMIGQNTKILPL 116 (317)
T ss_dssp ESCHHHHCCEEEEEEC-CSS--SCHHHHHHHHGGGEEEEEEEEEC
T ss_pred ecCccccCCCCEEEEe-cCc--ccHHHHHHHHHhhcCCCCEEEEc
Confidence 0111122569999996 443 24577888999999988766653
No 444
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.29 E-value=0.11 Score=49.27 Aligned_cols=91 Identities=14% Similarity=0.142 Sum_probs=58.0
Q ss_pred CCEEEEEccCCChhhHHH-HHhhcCCCcE-EEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 132 LKKVAFVGSGPMPLTSII-LASQHMKSTH-FDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~-LAk~~l~Ga~-VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
.++|..||+|.+|.+-.. +++ .|.. |+.+|.+++..+...+ ..| +.+ ..|..+ ...+.|+|++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~---~g~~~v~~~~~~~~~~~~~~~---~~g-----~~~-~~~~~~---~~~~~Dvvi~ 74 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYR---KGFRIVQVYSRTEESARELAQ---KVE-----AEY-TTDLAE---VNPYAKLYIV 74 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH---HTCCEEEEECSSHHHHHHHHH---HTT-----CEE-ESCGGG---SCSCCSEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHH---CCCeEEEEEeCCHHHHHHHHH---HcC-----Cce-eCCHHH---HhcCCCEEEE
Confidence 478999999987765332 223 3556 8999999987665433 335 222 234322 2346899999
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
+.-- ..-..+++.+.+.+++|.+|+.-+
T Consensus 75 av~~---~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 75 SLKD---SAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp CCCH---HHHHHHHHHHHTTCCTTCEEEECC
T ss_pred ecCH---HHHHHHHHHHHhhcCCCcEEEECC
Confidence 6332 233677788888888887665543
No 445
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.28 E-value=0.09 Score=56.22 Aligned_cols=98 Identities=12% Similarity=0.124 Sum_probs=64.9
Q ss_pred CCEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 132 LKKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 132 pkRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
.++|.+||.|.+|.+ +..|++ .|.+|+++|++++.++...+.- ..| .++.. ..+..++...+...|+||+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~---~G~~V~v~dr~~~~~~~l~~~g-~~g---~~i~~-~~s~~e~v~~l~~aDvVil~ 75 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMND---HGFVVCAFNRTVSKVDDFLANE-AKG---TKVVG-AQSLKEMVSKLKKPRRIILL 75 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSTHHHHHHHHTT-TTT---SSCEE-CSSHHHHHHTBCSSCEEEEC
T ss_pred CCEEEEEChhHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHhcc-cCC---Cceec-cCCHHHHHhhccCCCEEEEe
Confidence 468999999998876 334444 5779999999999876544321 012 23322 34444444444568999986
Q ss_pred cccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 211 ALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 211 ALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
--.+ ..-..+++.+...|+||.+|+--
T Consensus 76 Vp~~--~~v~~vl~~l~~~L~~g~iIId~ 102 (484)
T 4gwg_A 76 VKAG--QAVDDFIEKLVPLLDTGDIIIDG 102 (484)
T ss_dssp SCSS--HHHHHHHHHHGGGCCTTCEEEEC
T ss_pred cCCh--HHHHHHHHHHHHhcCCCCEEEEc
Confidence 3332 24567889999999998877553
No 446
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.26 E-value=0.095 Score=55.57 Aligned_cols=97 Identities=14% Similarity=0.209 Sum_probs=63.2
Q ss_pred CCCEEEEEccCCChhhH-HHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 131 QLKKVAFVGSGPMPLTS-IILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTA-I~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
..++|.+||+|.+|.+- ..|++ .|..|+.+|++++.++...+... | ..+.. +.|..++...+...|+||+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~---~G~~V~v~~r~~~~~~~l~~~~~--~---~gi~~-~~s~~e~v~~l~~aDvVil 84 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIES---RGYTVSIFNRSREKTEEVIAENP--G---KKLVP-YYTVKEFVESLETPRRILL 84 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHT---TTCCEEEECSSHHHHHHHHHHST--T---SCEEE-CSSHHHHHHTBCSSCEEEE
T ss_pred CCCeEEEEccHHHHHHHHHHHHh---CCCeEEEEeCCHHHHHHHHhhCC--C---CCeEE-eCCHHHHHhCCCCCCEEEE
Confidence 35789999999988763 33444 57789999999988765544221 1 22332 3344444444445899998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
.--.+ ..-..+++.+.+.++||.+|+-
T Consensus 85 ~Vp~~--~~v~~vl~~l~~~l~~g~iIId 111 (480)
T 2zyd_A 85 MVKAG--AGTDAAIDSLKPYLDKGDIIID 111 (480)
T ss_dssp CSCSS--SHHHHHHHHHGGGCCTTCEEEE
T ss_pred ECCCH--HHHHHHHHHHHhhcCCCCEEEE
Confidence 63322 2457788999999999886653
No 447
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.22 E-value=0.21 Score=50.22 Aligned_cols=100 Identities=18% Similarity=0.164 Sum_probs=63.2
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHHH-HHHh---hcCCcCCCeEEEEccccccccCCCCcc
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLAR-RIVS---SDDEIEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelAR-~li~---~lG~Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
..++|.-||+|.+|.+...+... .|. .|+.+|+|++.++... .+.. ..+ ...++++. .|. ..+.+.|
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~--~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~-~~~~i~~t-~d~----~al~~aD 84 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQ--KDLGDVYMFDIIEGVPQGKALDLNHCMALIG-SPAKIFGE-NNY----EYLQNSD 84 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSTTHHHHHHHHHHHHHHHHT-CCCCEEEE-SCG----GGGTTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECCHHHHHHHHHHHHhHhhccC-CCCEEEEC-CCH----HHHCCCC
Confidence 34799999999998875444332 344 7999999999887532 2211 222 22355542 443 3346789
Q ss_pred eEEecccc----CC---------hhhHHHHHHHHHhhcccCeEEEEE
Q 041205 206 CIILAALA----GN---------EEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 206 vVfiaALV----gm---------~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+|+++... |+ .+-+..+++.+.++. |++++++-
T Consensus 85 ~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~ 130 (328)
T 2hjr_A 85 VVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI 130 (328)
T ss_dssp EEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 99998633 11 123677788888775 88887653
No 448
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.18 E-value=0.053 Score=53.36 Aligned_cols=98 Identities=16% Similarity=0.264 Sum_probs=57.9
Q ss_pred CEEEEEccCCChhhHHH-HHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcC-----CCeEEEEccccccccCCCCcce
Q 041205 133 KKVAFVGSGPMPLTSII-LASQHMKSTHFDNIDIDETANNLARRIVSSDDEIE-----KRMKFLTCDIMEVKEKLGEYDC 206 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~-LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls-----~rI~Fi~GDA~el~~dL~~FDv 206 (535)
++|+.||+|.+|.+-.. |++ .|..|+.++.++ . + .+++.| +. ..+.+....+.+-+.....+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~---~g~~V~~~~r~~-~-~----~i~~~g-~~~~~~~g~~~~~~~~~~~~~~~~~~~D~ 72 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR---SGEDVHFLLRRD-Y-E----AIAGNG-LKVFSINGDFTLPHVKGYRAPEEIGPMDL 72 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH---TSCCEEEECSTT-H-H----HHHHTC-EEEEETTCCEEESCCCEESCHHHHCCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHH---CCCeEEEEEcCc-H-H----HHHhCC-CEEEcCCCeEEEeeceeecCHHHcCCCCE
Confidence 68999999999876433 444 567899999986 2 2 233444 20 1122100011111112357999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEEEccccc
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGA 244 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~Gl 244 (535)
|+++ .+. .+-..+++.+.+.++|+..|+.- .+|+
T Consensus 73 vila-vk~--~~~~~~l~~l~~~l~~~~~iv~l-~nGi 106 (312)
T 3hn2_A 73 VLVG-LKT--FANSRYEELIRPLVEEGTQILTL-QNGL 106 (312)
T ss_dssp EEEC-CCG--GGGGGHHHHHGGGCCTTCEEEEC-CSSS
T ss_pred EEEe-cCC--CCcHHHHHHHHhhcCCCCEEEEe-cCCC
Confidence 9996 442 23457899999999999876653 3454
No 449
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=94.18 E-value=0.024 Score=53.76 Aligned_cols=92 Identities=22% Similarity=0.320 Sum_probs=56.6
Q ss_pred CEEEEEccCCChhhHHH-HHhh-cCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 133 KKVAFVGSGPMPLTSII-LASQ-HMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~-LAk~-~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
++|.+||+|.+|.+-.. |++. +.+..+|+.+|++++..+...+ ..| + .+ ..|..+.. ...|+||++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~---~~g-~----~~-~~~~~e~~---~~aDvVila 70 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASE---KYG-L----TT-TTDNNEVA---KNADILILS 70 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHH---HHC-C----EE-CSCHHHHH---HHCSEEEEC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHH---HhC-C----EE-eCChHHHH---HhCCEEEEE
Confidence 68999999988765332 2331 1122389999999987655433 335 2 22 22332222 357999996
Q ss_pred cccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 211 ALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 211 ALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
- .. .....+++++.+.++||.+++..
T Consensus 71 v-~~--~~~~~v~~~l~~~l~~~~~vvs~ 96 (247)
T 3gt0_A 71 I-KP--DLYASIINEIKEIIKNDAIIVTI 96 (247)
T ss_dssp S-CT--TTHHHHC---CCSSCTTCEEEEC
T ss_pred e-CH--HHHHHHHHHHHhhcCCCCEEEEe
Confidence 4 32 56788999999999999877643
No 450
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=94.17 E-value=0.11 Score=54.65 Aligned_cols=95 Identities=16% Similarity=0.154 Sum_probs=62.3
Q ss_pred CEEEEEccCCChhhHH-HHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEecc
Q 041205 133 KKVAFVGSGPMPLTSI-ILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAA 211 (535)
Q Consensus 133 kRVLeIGSGplPlTAI-~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaA 211 (535)
++|..||+|.+|.+-. .|++ .|..|+.+|++++.++...+... + .++. ...|..++...+...|+|++.-
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~---~G~~V~v~dr~~~~~~~l~~~~~--~---~gi~-~~~s~~e~v~~l~~aDvVilav 76 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVES---RGYTVAIYNRTTSKTEEVFKEHQ--D---KNLV-FTKTLEEFVGSLEKPRRIMLMV 76 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHHTT--T---SCEE-ECSSHHHHHHTBCSSCEEEECC
T ss_pred CcEEEEeeHHHHHHHHHHHHh---CCCEEEEEcCCHHHHHHHHHhCc--C---CCeE-EeCCHHHHHhhccCCCEEEEEc
Confidence 6899999998886633 3444 46789999999988766554321 1 2333 2344444443344589999863
Q ss_pred ccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 212 LAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 212 LVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
-.+ ..-..+++.+.+.++||.+|+-
T Consensus 77 p~~--~~v~~vl~~l~~~l~~g~iiId 101 (474)
T 2iz1_A 77 QAG--AATDATIKSLLPLLDIGDILID 101 (474)
T ss_dssp CTT--HHHHHHHHHHGGGCCTTCEEEE
T ss_pred cCc--hHHHHHHHHHHhhCCCCCEEEE
Confidence 322 2356788899999999886653
No 451
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.14 E-value=0.1 Score=50.94 Aligned_cols=92 Identities=11% Similarity=0.152 Sum_probs=60.1
Q ss_pred CCEEEEEccCCChhhHHH-HHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 132 LKKVAFVGSGPMPLTSII-LASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~-LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
.++|.+||+|.+|.+-.. +++.-++..+|+.+|++++..+...+ ..| +.+ ..|..+. ..+.|+||++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~---~~g-----i~~-~~~~~~~---~~~aDvVila 70 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKE---KCG-----VHT-TQDNRQG---ALNADVVVLA 70 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHH---TTC-----CEE-ESCHHHH---HSSCSEEEEC
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHH---HcC-----CEE-eCChHHH---HhcCCeEEEE
Confidence 478999999988765433 33311222389999999987665443 345 233 2333222 2468999996
Q ss_pred cccCChhhHHHHHHHHHhh-cccCeEEEE
Q 041205 211 ALAGNEEEKAKILGHIRKY-MKEGGVLLV 238 (535)
Q Consensus 211 ALVgm~edK~~VL~eL~rv-LKPGGvLVv 238 (535)
--- .....+++++.+. ++++.+|+.
T Consensus 71 v~p---~~~~~vl~~l~~~~l~~~~iiiS 96 (280)
T 3tri_A 71 VKP---HQIKMVCEELKDILSETKILVIS 96 (280)
T ss_dssp SCG---GGHHHHHHHHHHHHHTTTCEEEE
T ss_pred eCH---HHHHHHHHHHHhhccCCCeEEEE
Confidence 422 5788999999998 888766654
No 452
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=94.13 E-value=0.076 Score=56.48 Aligned_cols=112 Identities=14% Similarity=0.121 Sum_probs=71.2
Q ss_pred chhhHHhHHHHHHHHHHhhC-CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCe
Q 041205 109 YENYVKLAKLEYGALIENTG-VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRM 187 (535)
Q Consensus 109 y~NYv~LirlE~~lL~~~~~-l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI 187 (535)
|+|..-+-+.-...+.+..+ ...+++|+-+|+|++|......++. .|++|+.+|+|+.....|. ..| +
T Consensus 196 fDn~yGt~~s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra--~Ga~Viv~D~dp~ra~~A~----~~G-~---- 264 (435)
T 3gvp_A 196 FDNLYCCRESILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKA--MGSIVYVTEIDPICALQAC----MDG-F---- 264 (435)
T ss_dssp HHTHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHH----HTT-C----
T ss_pred hhhhhhhHHHHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHH--CCCEEEEEeCChhhhHHHH----HcC-C----
Confidence 46644444444555555442 3578999999999999998888883 5899999999997544433 345 2
Q ss_pred EEEEccccccccCCCCcceEEeccccCChhhHHHHH-HHHHhhcccCeEEEEEcccc
Q 041205 188 KFLTCDIMEVKEKLGEYDCIILAALAGNEEEKAKIL-GHIRKYMKEGGVLLVRSAKG 243 (535)
Q Consensus 188 ~Fi~GDA~el~~dL~~FDvVfiaALVgm~edK~~VL-~eL~rvLKPGGvLVvRsa~G 243 (535)
++ .+.. .-+...|+|+..... ..++ .+..+.||||++|+- -++|
T Consensus 265 ~v--~~Le---eal~~ADIVi~atgt------~~lI~~e~l~~MK~gailIN-vgrg 309 (435)
T 3gvp_A 265 RL--VKLN---EVIRQVDIVITCTGN------KNVVTREHLDRMKNSCIVCN-MGHS 309 (435)
T ss_dssp EE--CCHH---HHTTTCSEEEECSSC------SCSBCHHHHHHSCTTEEEEE-CSST
T ss_pred Ee--ccHH---HHHhcCCEEEECCCC------cccCCHHHHHhcCCCcEEEE-ecCC
Confidence 22 2322 233568999984221 1123 255568999987754 4444
No 453
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.99 E-value=0.12 Score=54.59 Aligned_cols=102 Identities=16% Similarity=0.195 Sum_probs=64.8
Q ss_pred CEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHHHh---hcCCc--------CCCeEEEEccccccccC
Q 041205 133 KKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRIVS---SDDEI--------EKRMKFLTCDIMEVKEK 200 (535)
Q Consensus 133 kRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~---~lG~L--------s~rI~Fi~GDA~el~~d 200 (535)
++|..||+|.+|.+ +..||+ ..+|.+|+++|+|++.++..++-.. ..| + ..++++ +.|..+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~-~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~g-l~~~~~~~~~~~l~~-t~~~~~~--- 83 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAH-KCPHITVTVVDMNTAKIAEWNSDKLPIYEPG-LDEIVFAARGRNLFF-SSDIPKA--- 83 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-HCTTSEEEEECSCHHHHHHHTSSSCSSCCTT-HHHHHHHHBTTTEEE-ESCHHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEECCHHHHHHHHCCCCCcCCCC-HHHHHHHhhcCCEEE-ECCHHHH---
Confidence 69999999999986 556666 2347899999999998876543100 001 0 113443 2332221
Q ss_pred CCCcceEEeccccCC------------hhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 201 LGEYDCIILAALAGN------------EEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 201 L~~FDvVfiaALVgm------------~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..+.|+||+.---.. ...-..+++.+.+.++||.+|+..+
T Consensus 84 ~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 135 (481)
T 2o3j_A 84 IAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS 135 (481)
T ss_dssp HHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred hhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 235799998622110 1136778899999999998887654
No 454
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.93 E-value=0.097 Score=51.19 Aligned_cols=90 Identities=18% Similarity=0.240 Sum_probs=60.7
Q ss_pred CCEEEEEccCCChhhHH-HHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 132 LKKVAFVGSGPMPLTSI-ILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI-~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
.++|.+||+|.+|.+-. .+++ .|.+|+++|++++.++...+ .| +.+ ..|..++ .. .|+||+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~---~G~~V~~~dr~~~~~~~~~~----~g-----~~~-~~~~~~~---~~-aDvvi~~ 77 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE---WPGGVTVYDIRIEAMTPLAE----AG-----ATL-ADSVADV---AA-ADLIHIT 77 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT---STTCEEEECSSTTTSHHHHH----TT-----CEE-CSSHHHH---TT-SSEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHH----CC-----CEE-cCCHHHH---Hh-CCEEEEE
Confidence 46899999999987633 3333 57889999999988766543 35 222 2333332 24 7999985
Q ss_pred cccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 211 ALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 211 ALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
--- ...-..+++.+.+.++||.+++-.+
T Consensus 78 vp~--~~~~~~v~~~l~~~l~~g~ivv~~s 105 (296)
T 3qha_A 78 VLD--DAQVREVVGELAGHAKPGTVIAIHS 105 (296)
T ss_dssp CSS--HHHHHHHHHHHHTTCCTTCEEEECS
T ss_pred CCC--hHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 322 1234567899999999998876654
No 455
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.93 E-value=0.35 Score=50.27 Aligned_cols=75 Identities=16% Similarity=0.056 Sum_probs=50.7
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCC-cceEEe
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGE-YDCIIL 209 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~-FDvVfi 209 (535)
.+++|++||-|..|+++..+..+ .|.+|++.|..+.......+.+++.| |.+..|...+ ..+.+ +|+|+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~--~G~~V~~~D~~~~~~~~~~~~L~~~g-----i~~~~g~~~~--~~~~~~~d~vv~ 78 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAK--LGAIVTVNDGKPFDENPTAQSLLEEG-----IKVVCGSHPL--ELLDEDFCYMIK 78 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHH--TTCEEEEEESSCGGGCHHHHHHHHTT-----CEEEESCCCG--GGGGSCEEEEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEeCCcccCChHHHHHHhCC-----CEEEECCChH--HhhcCCCCEEEE
Confidence 57899999999999987666553 78999999996532111122344556 5777775432 11234 999998
Q ss_pred ccccC
Q 041205 210 AALAG 214 (535)
Q Consensus 210 aALVg 214 (535)
+..+.
T Consensus 79 spgi~ 83 (451)
T 3lk7_A 79 NPGIP 83 (451)
T ss_dssp CTTSC
T ss_pred CCcCC
Confidence 87774
No 456
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.91 E-value=0.094 Score=50.46 Aligned_cols=91 Identities=16% Similarity=0.165 Sum_probs=57.4
Q ss_pred CCCEEEEEccCCChhhHHH-HHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 131 QLKKVAFVGSGPMPLTSII-LASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~-LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
..++|..||+|.+|..-.. +++ .|.+|+.+|.+++..+...+ .| + .+ ..|..+.. ...|+|++
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~~~~~~~~~~~~----~g-~----~~-~~~~~~~~---~~~D~vi~ 66 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLK---EGVTVYAFDLMEANVAAVVA----QG-A----QA-CENNQKVA---AASDIIFT 66 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHH---TTCEEEEECSSHHHHHHHHT----TT-C----EE-CSSHHHHH---HHCSEEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHH----CC-C----ee-cCCHHHHH---hCCCEEEE
Confidence 3579999999998876433 333 47799999999987654332 25 2 22 23332222 35899999
Q ss_pred ccccCChhhHHHHHH---HHHhhcccCeEEEEE
Q 041205 210 AALAGNEEEKAKILG---HIRKYMKEGGVLLVR 239 (535)
Q Consensus 210 aALVgm~edK~~VL~---eL~rvLKPGGvLVvR 239 (535)
..... ..-..++. .+.+.++||.+|+.-
T Consensus 67 ~vp~~--~~~~~v~~~~~~l~~~l~~~~~vv~~ 97 (301)
T 3cky_A 67 SLPNA--GIVETVMNGPGGVLSACKAGTVIVDM 97 (301)
T ss_dssp CCSSH--HHHHHHHHSTTCHHHHSCTTCEEEEC
T ss_pred ECCCH--HHHHHHHcCcchHhhcCCCCCEEEEC
Confidence 64331 23455664 677788998876653
No 457
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.88 E-value=0.052 Score=52.48 Aligned_cols=90 Identities=12% Similarity=0.023 Sum_probs=59.0
Q ss_pred CEEEEEccCCChhhH-HHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEecc
Q 041205 133 KKVAFVGSGPMPLTS-IILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAA 211 (535)
Q Consensus 133 kRVLeIGSGplPlTA-I~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaA 211 (535)
++|.+||+|.+|.+- ..+++ .|.+|+++|++++.++...+ .| +.+ ..|..++. ...|+||+.-
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~~~~----~g-----~~~-~~~~~~~~---~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK---AGCSVTIWNRSPEKAEELAA----LG-----AER-AATPCEVV---ESCPVTFAML 65 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSSGGGGHHHHH----TT-----CEE-CSSHHHHH---HHCSEEEECC
T ss_pred CEEEEEeecHHHHHHHHHHHH---CCCeEEEEcCCHHHHHHHHH----CC-----Cee-cCCHHHHH---hcCCEEEEEc
Confidence 689999999888763 33444 57899999999988766543 25 222 23333322 3479999853
Q ss_pred ccCChhhHHHHH---HHHHhhcccCeEEEEEc
Q 041205 212 LAGNEEEKAKIL---GHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 212 LVgm~edK~~VL---~eL~rvLKPGGvLVvRs 240 (535)
--. ..-..++ +.+.+.++||.+++.-+
T Consensus 66 p~~--~~~~~v~~~~~~l~~~l~~~~~vi~~s 95 (287)
T 3pef_A 66 ADP--AAAEEVCFGKHGVLEGIGEGRGYVDMS 95 (287)
T ss_dssp SSH--HHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred CCH--HHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence 211 2445666 77788899998776544
No 458
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=93.84 E-value=0.084 Score=52.10 Aligned_cols=101 Identities=17% Similarity=0.207 Sum_probs=61.8
Q ss_pred CCEEEEEccCCChhhHH-HHHhhcCCC-------cEEEEEeCChh-----HHHHHHHHHhh---c-CC-cCCCeEEEEcc
Q 041205 132 LKKVAFVGSGPMPLTSI-ILASQHMKS-------THFDNIDIDET-----ANNLARRIVSS---D-DE-IEKRMKFLTCD 193 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI-~LAk~~l~G-------a~VtGIDIDpe-----AIelAR~li~~---l-G~-Ls~rI~Fi~GD 193 (535)
.++|..||+|.+|.+-. .|++ .| ..|+.+|++++ ..+..++.-.. . |. +..++.+ +.|
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~---~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~ 83 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGG---NAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA-VPD 83 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH---HHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE-ESS
T ss_pred CCeEEEECCCHHHHHHHHHHHh---cCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE-EcC
Confidence 46999999998877643 3444 34 68999999988 55543321100 0 10 1123433 233
Q ss_pred ccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcccc
Q 041205 194 IMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKG 243 (535)
Q Consensus 194 A~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~G 243 (535)
..+. ..++|+||++ ... .....+++.+.+.++||.+++.- ..|
T Consensus 84 ~~~~---~~~aD~Vila-v~~--~~~~~v~~~i~~~l~~~~ivv~~-~~G 126 (354)
T 1x0v_A 84 VVQA---AEDADILIFV-VPH--QFIGKICDQLKGHLKANATGISL-IKG 126 (354)
T ss_dssp HHHH---HTTCSEEEEC-CCG--GGHHHHHHHHTTCSCTTCEEEEC-CCC
T ss_pred HHHH---HcCCCEEEEe-CCH--HHHHHHHHHHHhhCCCCCEEEEE-CCc
Confidence 2221 2468999996 332 46788999999999998876543 344
No 459
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.84 E-value=0.11 Score=54.78 Aligned_cols=97 Identities=14% Similarity=0.190 Sum_probs=61.6
Q ss_pred CEEEEEccCCChhhH-HHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCC--cCCCeEEEEccccccccCCCCcceEEe
Q 041205 133 KKVAFVGSGPMPLTS-IILASQHMKSTHFDNIDIDETANNLARRIVSSDDE--IEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 133 kRVLeIGSGplPlTA-I~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~--Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
++|..||+|.+|..- ..|++ .|..|+.+|++++.++...+. .|. ...++. ...|..++...+...|+|++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~---~G~~V~v~dr~~~~~~~l~~~---~g~~~~~~~i~-~~~~~~e~v~~l~~aDvVil 74 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAE---KGFKVAVFNRTYSKSEEFMKA---NASAPFAGNLK-AFETMEAFAASLKKPRKALI 74 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHH---TTTSTTGGGEE-ECSCHHHHHHHBCSSCEEEE
T ss_pred CEEEEEChHHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHh---cCCCCCCCCeE-EECCHHHHHhcccCCCEEEE
Confidence 579999999888763 33444 467899999999887655442 230 012232 23344343333345899998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
.--.+ ..-..+++.+.+.++||.+|+.
T Consensus 75 aVp~~--~~v~~vl~~l~~~l~~g~iIId 101 (478)
T 1pgj_A 75 LVQAG--AATDSTIEQLKKVFEKGDILVD 101 (478)
T ss_dssp CCCCS--HHHHHHHHHHHHHCCTTCEEEE
T ss_pred ecCCh--HHHHHHHHHHHhhCCCCCEEEE
Confidence 63321 2456788899999999886654
No 460
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.81 E-value=0.51 Score=47.84 Aligned_cols=80 Identities=14% Similarity=0.089 Sum_probs=51.4
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHH-HHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANN-LARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIe-lAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..+++|.-||+|.+|.+............+|+.+|++++.++ .|..+......+..++++..+|.. .+.+.|+|+
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~----a~~~aDvVv 78 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYE----DCKDADIVC 78 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGG----GGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHH----HhCCCCEEE
Confidence 457899999999988886654331111248999999988654 344444433312245666666532 346789999
Q ss_pred ecccc
Q 041205 209 LAALA 213 (535)
Q Consensus 209 iaALV 213 (535)
+.+.+
T Consensus 79 i~ag~ 83 (326)
T 3pqe_A 79 ICAGA 83 (326)
T ss_dssp ECCSC
T ss_pred Eeccc
Confidence 98655
No 461
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.76 E-value=0.28 Score=48.52 Aligned_cols=100 Identities=16% Similarity=0.170 Sum_probs=61.7
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHH-HHHHhh---cCCcCCCeEEEEccccccccCCCCcc
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLA-RRIVSS---DDEIEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelA-R~li~~---lG~Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
..++|..||+|.+|.+....... .|. .|+.+|++++.++.. ..+... .+ ...++.+. .|. ..+.+.|
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~--~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~-~~~~i~~t-~d~----~a~~~aD 74 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGK--DNLADVVLFDIAEGIPQGKALDITHSMVMFG-STSKVIGT-DDY----ADISGSD 74 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSSSHHHHHHHHHHHHHHHHT-CCCCEEEE-SCG----GGGTTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCceEEEEeCCchHHHHHHHHHHhhhhhcC-CCcEEEEC-CCH----HHhCCCC
Confidence 46799999999988874443321 344 799999999877752 222211 22 12345432 343 2346789
Q ss_pred eEEeccccC----C---------hhhHHHHHHHHHhhcccCeEEEEE
Q 041205 206 CIILAALAG----N---------EEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 206 vVfiaALVg----m---------~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+|+++..+. + .+-+..+++.+.++ .|++++++-
T Consensus 75 iVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~-~~~~iii~~ 120 (317)
T 2ewd_A 75 VVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKY-CPNAFVICI 120 (317)
T ss_dssp EEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEe
Confidence 999976331 1 13367778888876 468877653
No 462
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.70 E-value=0.28 Score=49.80 Aligned_cols=79 Identities=15% Similarity=0.146 Sum_probs=52.2
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHH-HHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANN-LARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIe-lAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..+++|.-||+|.+|.+............+++-+|++++.++ .+..+..... +...+.+..+|. .++.+.|+|+
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~-~~~~~~i~~~~~----~a~~~aDiVv 81 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP-FTSPKKIYSAEY----SDAKDADLVV 81 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG-GSCCCEEEECCG----GGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh-hcCCcEEEECcH----HHhcCCCEEE
Confidence 567899999999998887654332122248999999987543 4444444333 224567666653 2346789999
Q ss_pred ecccc
Q 041205 209 LAALA 213 (535)
Q Consensus 209 iaALV 213 (535)
+.+.+
T Consensus 82 i~ag~ 86 (326)
T 3vku_A 82 ITAGA 86 (326)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 88665
No 463
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.66 E-value=0.16 Score=52.24 Aligned_cols=97 Identities=20% Similarity=0.242 Sum_probs=60.1
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCC-c------------CCCeEEEEcccccccc
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDE-I------------EKRMKFLTCDIMEVKE 199 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~-L------------s~rI~Fi~GDA~el~~ 199 (535)
++|..||+|.+|.+...... .|.+|+++|++++.++..++ .|. + ..++.+ +.|..+
T Consensus 1 MkI~VIG~G~vG~~~A~~La---~G~~V~~~d~~~~~~~~l~~----~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~--- 69 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLS---LQNEVTIVDILPSKVDKINN----GLSPIQDEYIEYYLKSKQLSIKA-TLDSKA--- 69 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHT---TTSEEEEECSCHHHHHHHHT----TCCSSCCHHHHHHHHHSCCCEEE-ESCHHH---
T ss_pred CEEEEECCCHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHc----CCCCcCCCCHHHHHHhccCcEEE-eCCHHH---
Confidence 48999999988776433322 27899999999988765432 120 0 013333 223211
Q ss_pred CCCCcceEEeccccCC--------hhhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 200 KLGEYDCIILAALAGN--------EEEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 200 dL~~FDvVfiaALVgm--------~edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
...+.|+||+.---.. ...-..+++.+.+ ++||.+++..+.
T Consensus 70 ~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST 118 (402)
T 1dlj_A 70 AYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKST 118 (402)
T ss_dssp HHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSC
T ss_pred HhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCC
Confidence 1235799998622210 0136788899999 999998887554
No 464
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.53 E-value=0.2 Score=50.50 Aligned_cols=101 Identities=21% Similarity=0.193 Sum_probs=64.3
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCc-EEEEEeCChhHHHHH-HHHHh---hcCCcCCCeEEEEccccccccCCCCcc
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKST-HFDNIDIDETANNLA-RRIVS---SDDEIEKRMKFLTCDIMEVKEKLGEYD 205 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga-~VtGIDIDpeAIelA-R~li~---~lG~Ls~rI~Fi~GDA~el~~dL~~FD 205 (535)
..++|.-||+|.+|.+...+... .|- .|+.+|++++.++.. ..+.. .++ ...++++ +.|..+ .+.+.|
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~--~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~-~~~~i~~-t~d~~e---a~~~aD 80 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCAL--RELADVVLYDVVKGMPEGKALDLSHVTSVVD-TNVSVRA-EYSYEA---ALTGAD 80 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSSSHHHHHHHHHHHHHHHTT-CCCCEEE-ECSHHH---HHTTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECChhHHHHHHHHHHhhhhccC-CCCEEEE-eCCHHH---HhCCCC
Confidence 45799999999998875444331 333 699999999887763 22222 233 2345554 345432 345789
Q ss_pred eEEeccccC----C--------------hhhHHHHHHHHHhhcccCeEEEEE
Q 041205 206 CIILAALAG----N--------------EEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 206 vVfiaALVg----m--------------~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+|++.+.+. + .+-+..++..+.++. |++++++-
T Consensus 81 iVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~ 131 (331)
T 1pzg_A 81 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVV 131 (331)
T ss_dssp EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEE
Confidence 999987442 1 122777888888875 88877653
No 465
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=93.51 E-value=0.094 Score=53.12 Aligned_cols=95 Identities=19% Similarity=0.161 Sum_probs=59.0
Q ss_pred CEEEEEccCCChhhHHH-HHhhcCCCcEEEEEe---CChhHHHHHHHHHhhcCC------cCC-------CeEEEEcccc
Q 041205 133 KKVAFVGSGPMPLTSII-LASQHMKSTHFDNID---IDETANNLARRIVSSDDE------IEK-------RMKFLTCDIM 195 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~-LAk~~l~Ga~VtGID---IDpeAIelAR~li~~lG~------Ls~-------rI~Fi~GDA~ 195 (535)
++|+.||+|.+|.+... |++ ..|..|+.+| .+++.++.+. +..|. ... ++...+.|..
T Consensus 3 mkI~ViGaG~~G~~~a~~La~--~~G~~V~~~~~~~r~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAAS--RDGVEVRVLTLFADEAERWTKAL---GADELTVIVNEKDGTQTEVKSRPKVITKDPE 77 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTT--STTEEEEEECCSTTHHHHHHHHH---TTSCEEEEEECSSSCEEEEEECCSEEESCHH
T ss_pred ceEEEECCCHHHHHHHHHHHh--CCCCEEEEEeCCCCcHHHHHHHH---hhccceeeeecCCCccceeeccceEEeCCHH
Confidence 58999999987766433 222 1478999999 7777665432 22220 000 1111222322
Q ss_pred ccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 196 EVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 196 el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
+ ....+|+||++--. .....+++.+.+.++||.+|+.
T Consensus 78 ~---a~~~aD~Vilav~~---~~~~~v~~~l~~~l~~~~ivv~ 114 (404)
T 3c7a_A 78 I---AISGADVVILTVPA---FAHEGYFQAMAPYVQDSALIVG 114 (404)
T ss_dssp H---HHTTCSEEEECSCG---GGHHHHHHHHTTTCCTTCEEEE
T ss_pred H---HhCCCCEEEEeCch---HHHHHHHHHHHhhCCCCcEEEE
Confidence 2 12468999996333 4678899999999999987766
No 466
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=93.50 E-value=0.34 Score=51.09 Aligned_cols=100 Identities=21% Similarity=0.268 Sum_probs=64.9
Q ss_pred CCCCEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHH------------HhhcCCcCCCeEEEEccccc
Q 041205 130 AQLKKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRI------------VSSDDEIEKRMKFLTCDIME 196 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~l------------i~~lG~Ls~rI~Fi~GDA~e 196 (535)
..+++.--||.|-+|++ |.+||+ .|-+|+++|+|++.++.-++- +++.- ...++.|- .|
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~---~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~-~~g~l~~t-td--- 80 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAK---HGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVL-SSGKLKVS-TT--- 80 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHH-HTTCEEEE-SS---
T ss_pred ccCCccEEEeeCHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhc-ccCceEEe-Cc---
Confidence 45789999999999986 466766 578999999999998876541 11100 01345553 23
Q ss_pred cccCCCCcceEEeccccCCh---------hhHHHHHHHHHhhcccCeEEEEEcc
Q 041205 197 VKEKLGEYDCIILAALAGNE---------EEKAKILGHIRKYMKEGGVLLVRSA 241 (535)
Q Consensus 197 l~~dL~~FDvVfiaALVgm~---------edK~~VL~eL~rvLKPGGvLVvRsa 241 (535)
..+.|+||+.---... ..-....+.+.+.|+||.+++..+.
T Consensus 81 ----~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~ST 130 (431)
T 3ojo_A 81 ----PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVEST 130 (431)
T ss_dssp ----CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSC
T ss_pred ----hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecC
Confidence 2357999985221111 1235667889999999998888763
No 467
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.41 E-value=0.12 Score=50.18 Aligned_cols=92 Identities=11% Similarity=0.156 Sum_probs=57.3
Q ss_pred CEEEEEccCCChhhHH-HHHhhcCCCcEEEEEeC--ChhHHHHHHHHHhhcCC-----cC-CCeEEEEc-cccccccCCC
Q 041205 133 KKVAFVGSGPMPLTSI-ILASQHMKSTHFDNIDI--DETANNLARRIVSSDDE-----IE-KRMKFLTC-DIMEVKEKLG 202 (535)
Q Consensus 133 kRVLeIGSGplPlTAI-~LAk~~l~Ga~VtGIDI--DpeAIelAR~li~~lG~-----Ls-~rI~Fi~G-DA~el~~dL~ 202 (535)
++|..||+|.+|.+-. .|++ .|..|+.+|. +++.++..++ .|. .. .++.+... |..+ ...
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~---~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~---~~~ 70 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVD---NGNEVRIWGTEFDTEILKSISA----GREHPRLGVKLNGVEIFWPEQLEK---CLE 70 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHH---HCCEEEEECCGGGHHHHHHHHT----TCCBTTTTBCCCSEEEECGGGHHH---HHT
T ss_pred CEEEEECcCHHHHHHHHHHHh---CCCeEEEEEccCCHHHHHHHHH----hCcCcccCccccceEEecHHhHHH---HHh
Confidence 4899999998876633 3434 4678999999 8887664432 230 00 11222110 2211 135
Q ss_pred CcceEEeccccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 203 EYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 203 ~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
++|+||+.--- .....++..+.+ ++||.+++.
T Consensus 71 ~~D~vi~~v~~---~~~~~v~~~i~~-l~~~~~vv~ 102 (335)
T 1txg_A 71 NAEVVLLGVST---DGVLPVMSRILP-YLKDQYIVL 102 (335)
T ss_dssp TCSEEEECSCG---GGHHHHHHHHTT-TCCSCEEEE
T ss_pred cCCEEEEcCCh---HHHHHHHHHHhc-CCCCCEEEE
Confidence 68999996333 467788888988 998887654
No 468
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=93.40 E-value=0.12 Score=51.92 Aligned_cols=93 Identities=19% Similarity=0.204 Sum_probs=61.1
Q ss_pred CCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhH-HHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 132 LKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETA-NNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeA-IelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
+++|..||+|.+|.+-...... .|.+|+.+|.+++. .+.+ ...| + .+. |..+.. ...|+|+++
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~--~G~~V~~~~~~~~~~~~~a----~~~G-~----~~~--~~~e~~---~~aDvVila 79 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKD--SGVDVTVGLRSGSATVAKA----EAHG-L----KVA--DVKTAV---AAADVVMIL 79 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH--TTCCEEEECCTTCHHHHHH----HHTT-C----EEE--CHHHHH---HTCSEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHH--CcCEEEEEECChHHHHHHH----HHCC-C----EEc--cHHHHH---hcCCEEEEe
Confidence 5789999999888775443332 46789999999764 4444 3456 3 322 433322 358999996
Q ss_pred cccCChhhHHHHHH-HHHhhcccCeEEEEEcccccc
Q 041205 211 ALAGNEEEKAKILG-HIRKYMKEGGVLLVRSAKGAR 245 (535)
Q Consensus 211 ALVgm~edK~~VL~-eL~rvLKPGGvLVvRsa~GlR 245 (535)
.-. ..-..++. ++.+.++||.+|+. ..|..
T Consensus 80 vp~---~~~~~v~~~~i~~~l~~~~ivi~--~~gv~ 110 (338)
T 1np3_A 80 TPD---EFQGRLYKEEIEPNLKKGATLAF--AHGFS 110 (338)
T ss_dssp SCH---HHHHHHHHHHTGGGCCTTCEEEE--SCCHH
T ss_pred CCc---HHHHHHHHHHHHhhCCCCCEEEE--cCCch
Confidence 433 23467787 88889999987774 35543
No 469
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=93.37 E-value=0.11 Score=55.70 Aligned_cols=113 Identities=12% Similarity=0.048 Sum_probs=74.4
Q ss_pred chhhHHhHHHHHHHHHHhh-CCCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCe
Q 041205 109 YENYVKLAKLEYGALIENT-GVAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRM 187 (535)
Q Consensus 109 y~NYv~LirlE~~lL~~~~-~l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI 187 (535)
|+|+.-+-+.-...+.+.. ..-.+++|+-||.|.+|.....+++. .|++|+.+|+|+.....|. ..| +
T Consensus 223 fDn~yG~~eslvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lra--fGa~Viv~d~dp~~a~~A~----~~G-~---- 291 (464)
T 3n58_A 223 FDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAG--AGARVKVTEVDPICALQAA----MDG-F---- 291 (464)
T ss_dssp THHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSHHHHHHHH----HTT-C----
T ss_pred hhhhhcchHHHHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHH--CCCEEEEEeCCcchhhHHH----hcC-c----
Confidence 6887777666666666544 23689999999999999998888873 6899999999997543332 345 2
Q ss_pred EEEEccccccccCCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEcccc
Q 041205 188 KFLTCDIMEVKEKLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKG 243 (535)
Q Consensus 188 ~Fi~GDA~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~G 243 (535)
++ .+..++ +...|+|+....- +.-+-.+..+.||||++|+ ..++|
T Consensus 292 ~v--v~LeEl---L~~ADIVv~atgt-----~~lI~~e~l~~MK~GAILI-NvGRg 336 (464)
T 3n58_A 292 EV--VTLDDA---ASTADIVVTTTGN-----KDVITIDHMRKMKDMCIVG-NIGHF 336 (464)
T ss_dssp EE--CCHHHH---GGGCSEEEECCSS-----SSSBCHHHHHHSCTTEEEE-ECSSS
T ss_pred ee--ccHHHH---HhhCCEEEECCCC-----ccccCHHHHhcCCCCeEEE-EcCCC
Confidence 22 233232 2468999875321 1112245566899999876 44444
No 470
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.32 E-value=0.17 Score=50.41 Aligned_cols=96 Identities=18% Similarity=0.233 Sum_probs=59.0
Q ss_pred EEEEEccCCChhhHHH-HHhhcCCCcEEEEEeCChhHHHHHHHHHhh---c-CC-cCCCeEEEEccccccccCCCCcceE
Q 041205 134 KVAFVGSGPMPLTSII-LASQHMKSTHFDNIDIDETANNLARRIVSS---D-DE-IEKRMKFLTCDIMEVKEKLGEYDCI 207 (535)
Q Consensus 134 RVLeIGSGplPlTAI~-LAk~~l~Ga~VtGIDIDpeAIelAR~li~~---l-G~-Ls~rI~Fi~GDA~el~~dL~~FDvV 207 (535)
+|.+||+|.+|.+-.. |++ .|..|+.+|.+++.++..++.-.. . |. +..++.+ ..|..+. ...+|+|
T Consensus 17 kI~iIG~G~mG~~la~~L~~---~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~aDvV 89 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSK---KCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF-TSDVEKA---YNGAEII 89 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTT---TEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE-ESCHHHH---HTTCSSE
T ss_pred eEEEECCCHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHHcCcccccccccccccceee-eCCHHHH---HcCCCEE
Confidence 8999999987765322 222 467899999999887665543110 0 10 1123333 2232221 2468999
Q ss_pred EeccccCChhhHHHHHHH----HHhhccc-CeEEEEE
Q 041205 208 ILAALAGNEEEKAKILGH----IRKYMKE-GGVLLVR 239 (535)
Q Consensus 208 fiaALVgm~edK~~VL~e----L~rvLKP-GGvLVvR 239 (535)
|+. ... .....++.. +...++| |.+++.-
T Consensus 90 ila-v~~--~~~~~v~~~~~~gl~~~l~~~~~ivv~~ 123 (366)
T 1evy_A 90 LFV-IPT--QFLRGFFEKSGGNLIAYAKEKQVPVLVC 123 (366)
T ss_dssp EEC-CCH--HHHHHHHHHHCHHHHHHHHHHTCCEEEC
T ss_pred EEC-CCh--HHHHHHHHHhHHHHHHhcCccCCEEEEE
Confidence 986 332 456778888 8888888 8766543
No 471
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=93.26 E-value=0.14 Score=53.56 Aligned_cols=101 Identities=17% Similarity=0.206 Sum_probs=62.5
Q ss_pred CEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHH------------HHhhcCCcCCCeEEEEcccccccc
Q 041205 133 KKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARR------------IVSSDDEIEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 133 kRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~------------li~~lG~Ls~rI~Fi~GDA~el~~ 199 (535)
++|..||+|.+|.+ +..|++ ..+|.+|+++|++++.++..++ ++... ...++++ +.|..+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~-~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~--~~~~~~~-t~~~~e~-- 79 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAH-MCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESC--RGKNLFF-STNIDDA-- 79 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-HCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHH--BTTTEEE-ESCHHHH--
T ss_pred cEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHh--hcCCEEE-ECCHHHH--
Confidence 69999999999985 445555 2237899999999998776432 11110 0123444 3333221
Q ss_pred CCCCcceEEeccccCCh------------hhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 KLGEYDCIILAALAGNE------------EEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~------------edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
..+.|+||+.---... ..-..+++.+.+.++||.+|+..+
T Consensus 80 -~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 131 (467)
T 2q3e_A 80 -IKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKS 131 (467)
T ss_dssp -HHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECS
T ss_pred -HhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECC
Confidence 2357999986322110 113577888899999988876654
No 472
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=93.25 E-value=0.016 Score=58.58 Aligned_cols=100 Identities=9% Similarity=-0.019 Sum_probs=60.9
Q ss_pred CCCCEEEEE--ccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCC---CCc
Q 041205 130 AQLKKVAFV--GSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKL---GEY 204 (535)
Q Consensus 130 ~~pkRVLeI--GSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL---~~F 204 (535)
.++++||-+ |+|++|..++.+|+. .|++|+++|.+++..+.+++ +| ...-+.....|..+..... ..+
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~--~Ga~Vi~~~~~~~~~~~~~~----lG-a~~~~~~~~~~~~~~v~~~t~~~g~ 241 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLK--DGIKLVNIVRKQEQADLLKA----QG-AVHVCNAASPTFMQDLTEALVSTGA 241 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHH--HTCCEEEEESSHHHHHHHHH----TT-CSCEEETTSTTHHHHHHHHHHHHCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHh----CC-CcEEEeCCChHHHHHHHHHhcCCCc
Confidence 578999999 899999999999994 58899999999999888775 56 2211211111211111111 259
Q ss_pred ceEEeccccCChhhHHHHHHHHHh-hcccCeEEEE
Q 041205 205 DCIILAALAGNEEEKAKILGHIRK-YMKEGGVLLV 238 (535)
Q Consensus 205 DvVfiaALVgm~edK~~VL~eL~r-vLKPGGvLVv 238 (535)
|+||-...-. .--...++.+.. .+++||.++.
T Consensus 242 d~v~d~~g~~--~~~~~~~~~l~~~~~r~~G~~~~ 274 (379)
T 3iup_A 242 TIAFDATGGG--KLGGQILTCMEAALNKSAREYSR 274 (379)
T ss_dssp CEEEESCEEE--SHHHHHHHHHHHHHHTTCCSCCT
T ss_pred eEEEECCCch--hhHHHHHHhcchhhhccccceee
Confidence 9998643321 112333443332 2467776654
No 473
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.19 E-value=0.044 Score=51.86 Aligned_cols=92 Identities=11% Similarity=0.096 Sum_probs=56.7
Q ss_pred CEEEEEccCCChhhHH-HHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCC---eEEEEccccccccCCCCcceEE
Q 041205 133 KKVAFVGSGPMPLTSI-ILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKR---MKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 133 kRVLeIGSGplPlTAI-~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~r---I~Fi~GDA~el~~dL~~FDvVf 208 (535)
++|..||+|.+|.+-. .|++ .|.+|+.+|.+++.++. +...+ .... ..+...+ .....++|+||
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~r~~~~~~~----l~~~~-~~~~~~~~~~~~~~----~~~~~~~d~vi 68 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCK---QGHEVQGWLRVPQPYCS----VNLVE-TDGSIFNESLTAND----PDFLATSDLLL 68 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSSCCSEEE----EEEEC-TTSCEEEEEEEESC----HHHHHTCSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHh---CCCCEEEEEcCccceee----EEEEc-CCCceeeeeeeecC----ccccCCCCEEE
Confidence 4899999998876533 2333 56799999999865321 22222 1111 1122211 11224689999
Q ss_pred eccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 209 LAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 209 iaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+.--. ..-..+++.+.+.++||.+++.-
T Consensus 69 ~~v~~---~~~~~v~~~l~~~l~~~~~vv~~ 96 (291)
T 1ks9_A 69 VTLKA---WQVSDAVKSLASTLPVTTPILLI 96 (291)
T ss_dssp ECSCG---GGHHHHHHHHHTTSCTTSCEEEE
T ss_pred EEecH---HhHHHHHHHHHhhCCCCCEEEEe
Confidence 96333 35678889999999998876654
No 474
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.17 E-value=0.16 Score=54.09 Aligned_cols=97 Identities=12% Similarity=0.124 Sum_probs=63.7
Q ss_pred CCEEEEEccCCChhhH-HHHHhhcCCCcEEEEEeCChhHHHHHHH-HHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 132 LKKVAFVGSGPMPLTS-IILASQHMKSTHFDNIDIDETANNLARR-IVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 132 pkRVLeIGSGplPlTA-I~LAk~~l~Ga~VtGIDIDpeAIelAR~-li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
..+|.+||+|.+|.+- ..|++ .|..|+++|++++.++...+ ... | .++.. +.|..++...+...|+||+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~---~G~~V~v~dr~~~~~~~l~~~~~~--~---~gi~~-~~s~~e~v~~l~~aDvVil 80 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAAD---HGFTVCAYNRTQSKVDHFLANEAK--G---KSIIG-ATSIEDFISKLKRPRKVML 80 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSSHHHHHHHHTTTT--T---SSEEC-CSSHHHHHHTSCSSCEEEE
T ss_pred CCCEEEEeeHHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHccccc--C---CCeEE-eCCHHHHHhcCCCCCEEEE
Confidence 4689999999988763 33444 57789999999998776544 211 1 12322 3344444444445899998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
.---+ ..-..+++.+.+.|+||.+|+--
T Consensus 81 ~Vp~~--~~v~~vl~~l~~~l~~g~iIId~ 108 (497)
T 2p4q_A 81 LVKAG--APVDALINQIVPLLEKGDIIIDG 108 (497)
T ss_dssp CCCSS--HHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EcCCh--HHHHHHHHHHHHhCCCCCEEEEC
Confidence 53222 24567889999999998877643
No 475
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.12 E-value=0.38 Score=48.09 Aligned_cols=100 Identities=13% Similarity=0.238 Sum_probs=60.6
Q ss_pred CCCCEEEEEccCCChhh-HHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLT-SIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlT-AI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
.+.++|.-||+|.+|.+ +..++.. ....+|+-+|+++++...+..+....+ .+++. ++|. .++.+.|+|+
T Consensus 12 ~~~~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~~~~g~a~dl~~~~~---~~i~~-t~d~----~~l~~aD~Vi 82 (303)
T 2i6t_A 12 KTVNKITVVGGGELGIACTLAISAK-GIADRLVLLDLSEGTKGATMDLEIFNL---PNVEI-SKDL----SASAHSKVVI 82 (303)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-----CHHHHHHHTC---TTEEE-ESCG----GGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCcchHHHHHHHhhhcC---CCeEE-eCCH----HHHCCCCEEE
Confidence 34579999999976643 3334442 224589999999986667777765322 36766 3553 3457799999
Q ss_pred eccccC---C---------hhhHHHHHHHHHhhcccCeEEEEE
Q 041205 209 LAALAG---N---------EEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 209 iaALVg---m---------~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+++.++ | .+-+.+++..+.++. |+++|++-
T Consensus 83 ~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 124 (303)
T 2i6t_A 83 FTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVA 124 (303)
T ss_dssp ECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEEC
T ss_pred EcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEc
Confidence 987442 0 123677777777765 88887653
No 476
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.04 E-value=0.12 Score=50.76 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=53.1
Q ss_pred CEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEecc
Q 041205 133 KKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAA 211 (535)
Q Consensus 133 kRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaA 211 (535)
++|..|| +|.+|.+-..... ..|..|+++|.+++. +..+ .....|+||++-
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~--~~G~~V~~~~~~~~~-----------------------~~~~---~~~~aDvVilav 73 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLR--ASGYPISILDREDWA-----------------------VAES---ILANADVVIVSV 73 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHH--TTTCCEEEECTTCGG-----------------------GHHH---HHTTCSEEEECS
T ss_pred CEEEEEcCCCHHHHHHHHHHH--hCCCeEEEEECCccc-----------------------CHHH---HhcCCCEEEEeC
Confidence 5899999 9988876443323 256789999998751 1111 124689999974
Q ss_pred ccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 212 LAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 212 LVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
-. .....++.++.+.++||.+|+.
T Consensus 74 p~---~~~~~vl~~l~~~l~~~~iv~~ 97 (298)
T 2pv7_A 74 PI---NLTLETIERLKPYLTENMLLAD 97 (298)
T ss_dssp CG---GGHHHHHHHHGGGCCTTSEEEE
T ss_pred CH---HHHHHHHHHHHhhcCCCcEEEE
Confidence 44 4678899999999999886654
No 477
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=93.04 E-value=0.17 Score=52.29 Aligned_cols=67 Identities=10% Similarity=0.059 Sum_probs=51.8
Q ss_pred CCCCCCEEEEEccCCChhhHHHHHhhcCC-CcEEEEEeCChhHHHHHHHHHhhc--CCcCCCeEEEEcccc
Q 041205 128 GVAQLKKVAFVGSGPMPLTSIILASQHMK-STHFDNIDIDETANNLARRIVSSD--DEIEKRMKFLTCDIM 195 (535)
Q Consensus 128 ~l~~pkRVLeIGSGplPlTAI~LAk~~l~-Ga~VtGIDIDpeAIelAR~li~~l--G~Ls~rI~Fi~GDA~ 195 (535)
.+.++..|+|||++ .|.+++.+|.+..+ .++|+++|.+|+..+.-+++++.. +..+.+++++..-+.
T Consensus 223 ~l~~~~~viDvGAn-~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 223 RFSDSEKMVDCGAS-IGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCCSSCEEEEETCT-TSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred ccCCCCEEEECCCC-cCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 35789999999998 78888888832344 389999999999999999999872 212257888776553
No 478
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.96 E-value=0.56 Score=46.85 Aligned_cols=103 Identities=23% Similarity=0.260 Sum_probs=58.3
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHH-HHHHHHhhcCCcCCCeEEE-EccccccccCCCCcceEEec
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANN-LARRIVSSDDEIEKRMKFL-TCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIe-lAR~li~~lG~Ls~rI~Fi-~GDA~el~~dL~~FDvVfia 210 (535)
++|..||+|.+|.+...+........+|+-+|++++.++ .+..+-.....+....++. +.| . ..+.+.|+|++.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~---~a~~~aDiVVia 76 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-Y---SLLKGSEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-G---GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-H---HHhCCCCEEEEC
Confidence 589999999998876554332112238999999998765 2333322210011234444 334 2 234678999998
Q ss_pred ccc----CC-hhhH----HHHH----HHHHhhcccCeEEEEEc
Q 041205 211 ALA----GN-EEEK----AKIL----GHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 211 ALV----gm-~edK----~~VL----~eL~rvLKPGGvLVvRs 240 (535)
+.+ || ..+. ..++ ..+.++ .|++++++-+
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvs 118 (294)
T 1oju_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT 118 (294)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence 765 23 1111 1333 344444 6788877754
No 479
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=92.95 E-value=0.16 Score=53.60 Aligned_cols=96 Identities=13% Similarity=0.134 Sum_probs=61.4
Q ss_pred CEEEEEccCCChhhH-HHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEecc
Q 041205 133 KKVAFVGSGPMPLTS-IILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAA 211 (535)
Q Consensus 133 kRVLeIGSGplPlTA-I~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaA 211 (535)
++|..||+|.+|.+- ..|++ .|.+|+.+|++++.++...+. +..| .++.. ..|..++...+...|+|++.-
T Consensus 3 m~IgvIG~G~mG~~lA~~La~---~G~~V~v~dr~~~~~~~l~~~-~~~g---~gi~~-~~~~~e~v~~l~~aDvVilaV 74 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND---HGFVVCAFNRTVSKVDDFLAN-EAKG---TKVLG-AHSLEEMVSKLKKPRRIILLV 74 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSTHHHHHHHHT-TTTT---SSCEE-CSSHHHHHHHBCSSCEEEECS
T ss_pred CeEEEEChHHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHhc-cccC---CCeEE-eCCHHHHHhhccCCCEEEEeC
Confidence 589999999888763 33444 467899999999887665441 0112 12332 334433332234689999852
Q ss_pred ccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 212 LAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 212 LVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
-.+ ..-..+++.+.+.++||.+|+.
T Consensus 75 p~~--~~v~~vl~~l~~~l~~g~iII~ 99 (482)
T 2pgd_A 75 KAG--QAVDNFIEKLVPLLDIGDIIID 99 (482)
T ss_dssp CTT--HHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCh--HHHHHHHHHHHhhcCCCCEEEE
Confidence 221 2456788899999999886654
No 480
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.93 E-value=0.13 Score=50.67 Aligned_cols=99 Identities=15% Similarity=0.225 Sum_probs=58.0
Q ss_pred CEEEEEccCCChhhHHH-HHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCC-----cCCCeEEEEccccccccCCC-Ccc
Q 041205 133 KKVAFVGSGPMPLTSII-LASQHMKSTHFDNIDIDETANNLARRIVSSDDE-----IEKRMKFLTCDIMEVKEKLG-EYD 205 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~-LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~-----Ls~rI~Fi~GDA~el~~dL~-~FD 205 (535)
++|+.||+|.+|.+--. |++ .|..|+.++.++ . +..+ +.|. ....+++....+..-+.+.. .+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~---~g~~V~~~~r~~-~-~~i~----~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAK---TGHCVSVVSRSD-Y-ETVK----AKGIRIRSATLGDYTFRPAAVVRSAAELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHH---TTCEEEEECSTT-H-HHHH----HHCEEEEETTTCCEEECCSCEESCGGGCSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHh---CCCeEEEEeCCh-H-HHHH----hCCcEEeecCCCcEEEeeeeeECCHHHcCCCCC
Confidence 69999999988876433 334 578999999987 2 2222 2230 00123331111111112223 699
Q ss_pred eEEeccccCChhhHHHHHHHHHhhcccCeEEEEEccccc
Q 041205 206 CIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGA 244 (535)
Q Consensus 206 vVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~Gl 244 (535)
+|+++ .+.. +-..+++.+.+.++|+..++.-. .|+
T Consensus 74 lVila-vK~~--~~~~~l~~l~~~l~~~t~Iv~~~-nGi 108 (320)
T 3i83_A 74 CTLLC-IKVV--EGADRVGLLRDAVAPDTGIVLIS-NGI 108 (320)
T ss_dssp EEEEC-CCCC--TTCCHHHHHTTSCCTTCEEEEEC-SSS
T ss_pred EEEEe-cCCC--ChHHHHHHHHhhcCCCCEEEEeC-CCC
Confidence 99996 4432 23468899999999988766533 454
No 481
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=92.92 E-value=0.47 Score=53.33 Aligned_cols=100 Identities=17% Similarity=0.287 Sum_probs=71.1
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhc-----------CC--cCCCeEEEEcccccccc
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSD-----------DE--IEKRMKFLTCDIMEVKE 199 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~l-----------G~--Ls~rI~Fi~GDA~el~~ 199 (535)
++|.-||+|.+|-.--..+- ..|..|+-+|+++++++.+++.+... +. ...++++ +.| ..
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a--~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~----~~ 389 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFA--RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSS----TK 389 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHH--TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESC----GG
T ss_pred cEEEEEcccHHHHHHHHHHH--hCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCc----HH
Confidence 69999999987654322222 37899999999999999998865421 10 1123433 222 22
Q ss_pred CCCCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 200 KLGEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 200 dL~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
++.+.|+|+=+ ...-.+-|.++|.++-++++|+.+|...+
T Consensus 390 ~l~~aDlVIEA-V~E~l~iK~~vf~~le~~~~~~aIlASNT 429 (742)
T 3zwc_A 390 ELSTVDLVVEA-VFEDMNLKKKVFAELSALCKPGAFLCTNT 429 (742)
T ss_dssp GGGSCSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred HHhhCCEEEEe-ccccHHHHHHHHHHHhhcCCCCceEEecC
Confidence 34678988853 44446889999999999999999998876
No 482
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.85 E-value=0.092 Score=50.73 Aligned_cols=90 Identities=12% Similarity=0.037 Sum_probs=57.7
Q ss_pred CEEEEEccCCChhhH-HHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEecc
Q 041205 133 KKVAFVGSGPMPLTS-IILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILAA 211 (535)
Q Consensus 133 kRVLeIGSGplPlTA-I~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfiaA 211 (535)
++|.+||+|.+|.+- ..+++ .|.+|+++|++++.++...+. | . .+ ..|..++. ...|+|++.-
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~~~~~----g-~----~~-~~~~~~~~---~~advvi~~v 65 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVR---AGFDVTVWNRNPAKCAPLVAL----G-A----RQ-ASSPAEVC---AACDITIAML 65 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHH---HTCCEEEECSSGGGGHHHHHH----T-C----EE-CSCHHHHH---HHCSEEEECC
T ss_pred CeEEEEccCHHHHHHHHHHHH---CCCeEEEEcCCHHHHHHHHHC----C-C----ee-cCCHHHHH---HcCCEEEEEc
Confidence 479999999998763 34444 467899999999887665432 5 1 22 23333322 3479999853
Q ss_pred ccCChhhHHHHH---HHHHhhcccCeEEEEEc
Q 041205 212 LAGNEEEKAKIL---GHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 212 LVgm~edK~~VL---~eL~rvLKPGGvLVvRs 240 (535)
-.. ..-..++ +.+.+.++||.+++--+
T Consensus 66 ~~~--~~~~~v~~~~~~l~~~l~~g~~vv~~s 95 (287)
T 3pdu_A 66 ADP--AAAREVCFGANGVLEGIGGGRGYIDMS 95 (287)
T ss_dssp SSH--HHHHHHHHSTTCGGGTCCTTCEEEECS
T ss_pred CCH--HHHHHHHcCchhhhhcccCCCEEEECC
Confidence 221 1334556 66778889988776544
No 483
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=92.82 E-value=0.098 Score=52.66 Aligned_cols=96 Identities=13% Similarity=0.174 Sum_probs=57.7
Q ss_pred CEEEEEccCCChhhH-HHHHhhcCCC-------cEEEEEeCChh-----HHHHHHHHH---hhc-CC-cCCCeEEEEccc
Q 041205 133 KKVAFVGSGPMPLTS-IILASQHMKS-------THFDNIDIDET-----ANNLARRIV---SSD-DE-IEKRMKFLTCDI 194 (535)
Q Consensus 133 kRVLeIGSGplPlTA-I~LAk~~l~G-------a~VtGIDIDpe-----AIelAR~li---~~l-G~-Ls~rI~Fi~GDA 194 (535)
++|.+||+|.+|.+- ..|++ .| ..|+.+|.+++ .++.-++.- ... |. +..++.+ +.|.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~---~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~-~~~~ 97 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGT---NAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVA-HSDL 97 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHH---HHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEE-ESST
T ss_pred CEEEEECcCHHHHHHHHHHHH---cCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEE-ECCH
Confidence 589999999888763 33444 34 68999999987 444332211 000 10 1123433 2232
Q ss_pred cccccCCCCcceEEeccccCChhhHHHHHHHHHh----hcccCeEEEE
Q 041205 195 MEVKEKLGEYDCIILAALAGNEEEKAKILGHIRK----YMKEGGVLLV 238 (535)
Q Consensus 195 ~el~~dL~~FDvVfiaALVgm~edK~~VL~eL~r----vLKPGGvLVv 238 (535)
.+. ..+.|+||++ ... .....++..+.. .++||.+++.
T Consensus 98 ~ea---~~~aDvVila-v~~--~~~~~vl~~i~~~~~~~l~~~~ivvs 139 (375)
T 1yj8_A 98 ASV---INDADLLIFI-VPC--QYLESVLASIKESESIKIASHAKAIS 139 (375)
T ss_dssp HHH---HTTCSEEEEC-CCH--HHHHHHHHHHTC---CCCCTTCEEEE
T ss_pred HHH---HcCCCEEEEc-CCH--HHHHHHHHHHhhhhhccCCCCCEEEE
Confidence 221 2468999996 332 567778888877 8888877654
No 484
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.75 E-value=0.063 Score=53.34 Aligned_cols=95 Identities=16% Similarity=0.210 Sum_probs=55.3
Q ss_pred CCEEEEEccCCChhhHH-HHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcC---CCeEEEE-ccccccccCCCCcce
Q 041205 132 LKKVAFVGSGPMPLTSI-ILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIE---KRMKFLT-CDIMEVKEKLGEYDC 206 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI-~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls---~rI~Fi~-GDA~el~~dL~~FDv 206 (535)
.++|+.||+|.+|.+-. .|++ .|..|+.+|.+ +.++. +++.| +. ....+.. ..+.+-+....++|+
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~---~g~~V~~~~r~-~~~~~----~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 73 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLAL---AGEAINVLARG-ATLQA----LQTAG-LRLTEDGATHTLPVRATHDAAALGEQDV 73 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHH---TTCCEEEECCH-HHHHH----HHHTC-EEEEETTEEEEECCEEESCHHHHCCCSE
T ss_pred CCEEEEECcCHHHHHHHHHHHH---CCCEEEEEECh-HHHHH----HHHCC-CEEecCCCeEEEeeeEECCHHHcCCCCE
Confidence 47999999998887643 3444 56789999986 43332 23344 21 0111110 001101112356999
Q ss_pred EEeccccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 207 IILAALAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 207 VfiaALVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
|+++ ... .+-..+++.+.+.++|+.+|+.
T Consensus 74 Vila-vk~--~~~~~~~~~l~~~l~~~~~iv~ 102 (335)
T 3ghy_A 74 VIVA-VKA--PALESVAAGIAPLIGPGTCVVV 102 (335)
T ss_dssp EEEC-CCH--HHHHHHHGGGSSSCCTTCEEEE
T ss_pred EEEe-CCc--hhHHHHHHHHHhhCCCCCEEEE
Confidence 9996 332 3556777778888888877665
No 485
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.75 E-value=0.15 Score=50.45 Aligned_cols=89 Identities=18% Similarity=0.213 Sum_probs=58.2
Q ss_pred CCCEEEEEccCCChhhHHH-HHhhcCCC----cEEEEEeCChh--HHHHHHHHHhhcCCcCCCeEEEEccccccccCCCC
Q 041205 131 QLKKVAFVGSGPMPLTSII-LASQHMKS----THFDNIDIDET--ANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGE 203 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~-LAk~~l~G----a~VtGIDIDpe--AIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~ 203 (535)
..++|.+||+|.+|.+-.. |++ .| ..|+.+|.+++ .++..+ ..| +.+ ..|..+. ...
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~---~G~~~~~~V~v~~r~~~~~~~~~l~----~~G-----~~~-~~~~~e~---~~~ 84 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTA---AGVLAAHKIMASSPDMDLATVSALR----KMG-----VKL-TPHNKET---VQH 84 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHH---TTSSCGGGEEEECSCTTSHHHHHHH----HHT-----CEE-ESCHHHH---HHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---CCCCCcceEEEECCCccHHHHHHHH----HcC-----CEE-eCChHHH---hcc
Confidence 3468999999988766432 333 34 67999999986 554433 346 232 2333222 235
Q ss_pred cceEEeccccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 204 YDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 204 FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
.|+||++- .. .....++..+...++||.+|+.
T Consensus 85 aDvVilav-~~--~~~~~vl~~l~~~l~~~~ivvs 116 (322)
T 2izz_A 85 SDVLFLAV-KP--HIIPFILDEIGADIEDRHIVVS 116 (322)
T ss_dssp CSEEEECS-CG--GGHHHHHHHHGGGCCTTCEEEE
T ss_pred CCEEEEEe-CH--HHHHHHHHHHHhhcCCCCEEEE
Confidence 89999963 32 5678889999888988876654
No 486
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=92.53 E-value=0.3 Score=49.32 Aligned_cols=72 Identities=17% Similarity=0.231 Sum_probs=50.5
Q ss_pred CCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEcccccccc-CCC--CcceEE
Q 041205 132 LKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKE-KLG--EYDCII 208 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~-dL~--~FDvVf 208 (535)
+.+|+|+-||.+|++. -+...-..-..|.++|+|+.+++..+.++.. ..++++|+.++.. .+. .+|+|+
T Consensus 2 ~~~v~dLFaG~Gg~~~-g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~-------~~~~~~Di~~~~~~~~~~~~~D~l~ 73 (343)
T 1g55_A 2 PLRVLELYSGVGGMHH-ALRESCIPAQVVAAIDVNTVANEVYKYNFPH-------TQLLAKTIEGITLEEFDRLSFDMIL 73 (343)
T ss_dssp CEEEEEETCTTCHHHH-HHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-------SCEECSCGGGCCHHHHHHHCCSEEE
T ss_pred CCeEEEeCcCccHHHH-HHHHCCCCceEEEEEeCCHHHHHHHHHhccc-------cccccCCHHHccHhHcCcCCcCEEE
Confidence 4689999999877664 4444211113699999999999999998643 2367899887642 122 589999
Q ss_pred ecc
Q 041205 209 LAA 211 (535)
Q Consensus 209 iaA 211 (535)
...
T Consensus 74 ~gp 76 (343)
T 1g55_A 74 MSP 76 (343)
T ss_dssp ECC
T ss_pred EcC
Confidence 763
No 487
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.52 E-value=0.62 Score=46.15 Aligned_cols=100 Identities=16% Similarity=0.219 Sum_probs=57.6
Q ss_pred CEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHH-HHHhh---cCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 133 KKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLAR-RIVSS---DDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 133 kRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR-~li~~---lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
++|.-||+|.+|.+..........+.+|+.+|++++.++.-. .+... .+ ...++.+ +.|.. ++.+.|+|+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~-~~~~i~~-t~d~~----~l~~aDvVi 74 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGL-FDTKVTG-SNDYA----DTANSDIVI 74 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHT-CCCEEEE-ESCGG----GGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhccc-CCcEEEE-CCCHH----HHCCCCEEE
Confidence 489999999998875554432213789999999998776321 12111 12 1122332 23432 256789999
Q ss_pred ecccc----CC-hhh--------HHHHHHHHHhhcccCeEEEEE
Q 041205 209 LAALA----GN-EEE--------KAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 209 iaALV----gm-~ed--------K~~VL~eL~rvLKPGGvLVvR 239 (535)
++... |+ ..+ ...+.+.+.++ .|+|.+++-
T Consensus 75 iav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~viv~ 117 (310)
T 1guz_A 75 ITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIVV 117 (310)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEEC
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEE
Confidence 97644 22 111 13455555555 577776653
No 488
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=92.43 E-value=0.19 Score=53.48 Aligned_cols=112 Identities=8% Similarity=0.012 Sum_probs=72.9
Q ss_pred chhhHHhHHHHHHHHHHhhC-CCCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCe
Q 041205 109 YENYVKLAKLEYGALIENTG-VAQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRM 187 (535)
Q Consensus 109 y~NYv~LirlE~~lL~~~~~-l~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI 187 (535)
|+|+..+.+.=...+.+..+ .-.+++|..||.|.+|.....+++. .|++|+++|+++.....|. ..| .
T Consensus 187 ~Dn~~Gt~~slldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka--~Ga~Viv~D~~p~~a~~A~----~~G-~---- 255 (436)
T 3h9u_A 187 FDNLYGCRESLVDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRG--FGARVVVTEVDPINALQAA----MEG-Y---- 255 (436)
T ss_dssp THHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHH----HTT-C----
T ss_pred hhccccchHHHHHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHH--CCCEEEEECCChhhhHHHH----HhC-C----
Confidence 57777666655566555443 3478999999999999988888773 5899999999987654443 345 2
Q ss_pred EEEEccccccccCCCCcceEEecccc-CChhhHHHHHHHHHhhcccCeEEEEEcccc
Q 041205 188 KFLTCDIMEVKEKLGEYDCIILAALA-GNEEEKAKILGHIRKYMKEGGVLLVRSAKG 243 (535)
Q Consensus 188 ~Fi~GDA~el~~dL~~FDvVfiaALV-gm~edK~~VL~eL~rvLKPGGvLVvRsa~G 243 (535)
++ .+..+ -+...|+|++...- ++.. .+..+.||||++|+ .-++|
T Consensus 256 ~~--~sL~e---al~~ADVVilt~gt~~iI~------~e~l~~MK~gAIVI-NvgRg 300 (436)
T 3h9u_A 256 QV--LLVED---VVEEAHIFVTTTGNDDIIT------SEHFPRMRDDAIVC-NIGHF 300 (436)
T ss_dssp EE--CCHHH---HTTTCSEEEECSSCSCSBC------TTTGGGCCTTEEEE-ECSSS
T ss_pred ee--cCHHH---HHhhCCEEEECCCCcCccC------HHHHhhcCCCcEEE-EeCCC
Confidence 22 23333 33568999975322 2211 24466799998764 44454
No 489
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.42 E-value=0.53 Score=47.02 Aligned_cols=99 Identities=15% Similarity=0.193 Sum_probs=57.2
Q ss_pred CEEEEEcc-CCChhhHHHHHhhcCCC--cEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEc--cccccccCCCCcceE
Q 041205 133 KKVAFVGS-GPMPLTSIILASQHMKS--THFDNIDIDETANNLARRIVSSDDEIEKRMKFLTC--DIMEVKEKLGEYDCI 207 (535)
Q Consensus 133 kRVLeIGS-GplPlTAI~LAk~~l~G--a~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~G--DA~el~~dL~~FDvV 207 (535)
+||+-||+ |.+|.+...... ..+ .+|+.+|+++ +-..+..+..... ..++++..+ |.. ..+.+.|+|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~--~~~~~~ev~L~Di~~-~~~~a~dL~~~~~--~~~l~~~~~t~d~~---~a~~~aDvV 72 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLK--NSPLVSRLTLYDIAH-TPGVAADLSHIET--RATVKGYLGPEQLP---DCLKGCDVV 72 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHH--TCTTCSEEEEEESSS-HHHHHHHHTTSSS--SCEEEEEESGGGHH---HHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHH--hCCCCcEEEEEeCCc-cHHHHHHHhccCc--CceEEEecCCCCHH---HHhCCCCEE
Confidence 48999997 999998665543 234 6899999998 4444444433221 123554433 322 224678999
Q ss_pred EeccccC----C-hhhH----HHHHHHHHhh---cccCeEEEEE
Q 041205 208 ILAALAG----N-EEEK----AKILGHIRKY---MKEGGVLLVR 239 (535)
Q Consensus 208 fiaALVg----m-~edK----~~VL~eL~rv---LKPGGvLVvR 239 (535)
|+.+.+. + ..+. ..++.++.+. ..|+|++++-
T Consensus 73 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 116 (314)
T 1mld_A 73 VIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII 116 (314)
T ss_dssp EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred EECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE
Confidence 9987653 2 1111 1334444332 2588877774
No 490
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.35 E-value=0.23 Score=46.27 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=50.3
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEec
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIILA 210 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfia 210 (535)
..++|..||+|.+|.+-..... ..|.+|+.+|.+++ ...+.|+|+++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~--~~g~~V~~~~~~~~-------------------------------~~~~aD~vi~a 64 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFE--IAGHEVTYYGSKDQ-------------------------------ATTLGEIVIMA 64 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHH--HTTCEEEEECTTCC-------------------------------CSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHH--HCCCEEEEEcCCHH-------------------------------HhccCCEEEEc
Confidence 4579999999988766433222 15678999998876 12457999986
Q ss_pred cccCChhhHHHHHHHHHhhcccCeEEEEEccccc
Q 041205 211 ALAGNEEEKAKILGHIRKYMKEGGVLLVRSAKGA 244 (535)
Q Consensus 211 ALVgm~edK~~VL~eL~rvLKPGGvLVvRsa~Gl 244 (535)
.-. .....++..+.+.++ |.+++ ....|+
T Consensus 65 v~~---~~~~~v~~~l~~~~~-~~~vi-~~~~g~ 93 (209)
T 2raf_A 65 VPY---PALAALAKQYATQLK-GKIVV-DITNPL 93 (209)
T ss_dssp SCH---HHHHHHHHHTHHHHT-TSEEE-ECCCCB
T ss_pred CCc---HHHHHHHHHHHHhcC-CCEEE-EECCCC
Confidence 332 456678888888887 66554 444443
No 491
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.34 E-value=0.033 Score=48.40 Aligned_cols=88 Identities=15% Similarity=0.161 Sum_probs=51.6
Q ss_pred CCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEE-EccccccccCCCCcceEEe
Q 041205 131 QLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFL-TCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 131 ~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi-~GDA~el~~dL~~FDvVfi 209 (535)
.+++|+.||+|.+|........ ..|.+|+.+|++++..+ ++.+..| . .+. ..+..+ ...++|+|+.
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~--~~g~~v~v~~r~~~~~~---~~a~~~~-~----~~~~~~~~~~---~~~~~Divi~ 86 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFS--YPQYKVTVAGRNIDHVR---AFAEKYE-Y----EYVLINDIDS---LIKNNDVIIT 86 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCC--TTTCEEEEEESCHHHHH---HHHHHHT-C----EEEECSCHHH---HHHTCSEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHH--hCCCEEEEEcCCHHHHH---HHHHHhC-C----ceEeecCHHH---HhcCCCEEEE
Confidence 4899999999976665443322 35778999999987654 3444445 1 222 222222 2246899998
Q ss_pred ccccCChhhHHHHHHHHHhhcccCeEEEE
Q 041205 210 AALAGNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 210 aALVgm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
+...+. .++. ...++||+.++-
T Consensus 87 at~~~~-----~~~~--~~~l~~g~~vid 108 (144)
T 3oj0_A 87 ATSSKT-----PIVE--ERSLMPGKLFID 108 (144)
T ss_dssp CSCCSS-----CSBC--GGGCCTTCEEEE
T ss_pred eCCCCC-----cEee--HHHcCCCCEEEE
Confidence 654421 0111 245777776643
No 492
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=92.31 E-value=0.35 Score=52.14 Aligned_cols=108 Identities=16% Similarity=0.132 Sum_probs=68.0
Q ss_pred chhhHHhHHHHHHHHHHhhCC-CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCe
Q 041205 109 YENYVKLAKLEYGALIENTGV-AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRM 187 (535)
Q Consensus 109 y~NYv~LirlE~~lL~~~~~l-~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI 187 (535)
|+|...+.+.-...+.+..+. -.+++|+-+|.|++|......+.. .|++|+.+|+++.....+.. .| .
T Consensus 241 fDn~yGt~~sl~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa--~GA~Viv~D~~~~~a~~Aa~----~g-~---- 309 (488)
T 3ond_A 241 FDNLYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQ--AGARVIVTEIDPICALQATM----EG-L---- 309 (488)
T ss_dssp THHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHH----TT-C----
T ss_pred hhhhccccHHHHHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHH----hC-C----
Confidence 466655655555555554432 478999999999888877666553 68999999999987655543 34 1
Q ss_pred EEEEccccccccCCCCcceEEecccc-CChhhHHHHHHHHHhhcccCeEEEE
Q 041205 188 KFLTCDIMEVKEKLGEYDCIILAALA-GNEEEKAKILGHIRKYMKEGGVLLV 238 (535)
Q Consensus 188 ~Fi~GDA~el~~dL~~FDvVfiaALV-gm~edK~~VL~eL~rvLKPGGvLVv 238 (535)
.+ .+. ..-...+|+|+..... +. +-....+.|++|++|+-
T Consensus 310 dv--~~l---ee~~~~aDvVi~atG~~~v------l~~e~l~~mk~gaiVvN 350 (488)
T 3ond_A 310 QV--LTL---EDVVSEADIFVTTTGNKDI------IMLDHMKKMKNNAIVCN 350 (488)
T ss_dssp EE--CCG---GGTTTTCSEEEECSSCSCS------BCHHHHTTSCTTEEEEE
T ss_pred cc--CCH---HHHHHhcCEEEeCCCChhh------hhHHHHHhcCCCeEEEE
Confidence 11 222 2223468988865332 11 11224667999987754
No 493
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=92.28 E-value=0.37 Score=51.38 Aligned_cols=79 Identities=14% Similarity=0.185 Sum_probs=49.9
Q ss_pred CCEEEEEccCCChhhHH--HHHhh--cCCCcEEEEEeCChhHHHHHHHHHhhc--CCcCCCeEEEE-ccccccccCCCCc
Q 041205 132 LKKVAFVGSGPMPLTSI--ILASQ--HMKSTHFDNIDIDETANNLARRIVSSD--DEIEKRMKFLT-CDIMEVKEKLGEY 204 (535)
Q Consensus 132 pkRVLeIGSGplPlTAI--~LAk~--~l~Ga~VtGIDIDpeAIelAR~li~~l--G~Ls~rI~Fi~-GDA~el~~dL~~F 204 (535)
.++|..||+|....+++ .++.+ -+++.+|+-+|++++.++....+.... + .....++.. .|.. ..+.+.
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~-~~~~~~I~~t~D~~---eal~~A 103 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIRE-KAPDIEFAATTDPE---EAFTDV 103 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHH-HCTTSEEEEESCHH---HHHSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhcc-CCCCCEEEEECCHH---HHHcCC
Confidence 46999999997634433 46553 244778999999999877655443332 1 112344443 4532 233578
Q ss_pred ceEEeccccC
Q 041205 205 DCIILAALAG 214 (535)
Q Consensus 205 DvVfiaALVg 214 (535)
|+|++.+.++
T Consensus 104 D~VViaag~~ 113 (472)
T 1u8x_X 104 DFVMAHIRVG 113 (472)
T ss_dssp SEEEECCCTT
T ss_pred CEEEEcCCCc
Confidence 9999988774
No 494
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.26 E-value=0.22 Score=49.21 Aligned_cols=90 Identities=19% Similarity=0.198 Sum_probs=57.6
Q ss_pred CCEEEEEccCCChhhH-HHHHhhcCCCc-EEEEEeCC--hhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceE
Q 041205 132 LKKVAFVGSGPMPLTS-IILASQHMKST-HFDNIDID--ETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCI 207 (535)
Q Consensus 132 pkRVLeIGSGplPlTA-I~LAk~~l~Ga-~VtGIDID--peAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvV 207 (535)
.++|.+||+|.+|.+- ..|++ .|. .|+++|++ ++..+.+. ..| +.+ ..+..+.. ...|+|
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~---~G~~~V~~~dr~~~~~~~~~~~----~~g-----~~~-~~~~~e~~---~~aDvV 87 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQ---AGAIDMAAYDAASAESWRPRAE----ELG-----VSC-KASVAEVA---GECDVI 87 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH---HSCCEEEEECSSCHHHHHHHHH----HTT-----CEE-CSCHHHHH---HHCSEE
T ss_pred CCEEEEECccHHHHHHHHHHHH---CCCCeEEEEcCCCCHHHHHHHH----HCC-----CEE-eCCHHHHH---hcCCEE
Confidence 4799999999888653 23434 366 89999997 46555433 345 222 22332222 357999
Q ss_pred EeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 208 ILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 208 fiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
|+.--- ..-.+++..+...+++|.+|+--+
T Consensus 88 i~~vp~---~~~~~~~~~l~~~l~~~~ivvd~s 117 (312)
T 3qsg_A 88 FSLVTA---QAALEVAQQAGPHLCEGALYADFT 117 (312)
T ss_dssp EECSCT---TTHHHHHHHHGGGCCTTCEEEECC
T ss_pred EEecCc---hhHHHHHHhhHhhcCCCCEEEEcC
Confidence 986333 234457899999999998776543
No 495
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=92.25 E-value=0.51 Score=46.31 Aligned_cols=95 Identities=11% Similarity=0.077 Sum_probs=56.7
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEE-EeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDN-IDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtG-IDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
.+..||..||||.+|..-+.......++.++++ +|.+++..+ ++.++.| .. . ...|..++..+ .+.|+|+
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~---~~a~~~g-~~---~-~~~~~~~~l~~-~~~D~V~ 76 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLE---WAKNELG-VE---T-TYTNYKDMIDT-ENIDAIF 76 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHH---HHHHTTC-CS---E-EESCHHHHHTT-SCCSEEE
T ss_pred CCcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHH---HHHHHhC-CC---c-ccCCHHHHhcC-CCCCEEE
Confidence 346799999999988654333221246888765 599987653 3444556 21 1 23565554432 3699999
Q ss_pred eccccCChhhHHHHHHHHHhhcccCeEEEEE
Q 041205 209 LAALAGNEEEKAKILGHIRKYMKEGGVLLVR 239 (535)
Q Consensus 209 iaALVgm~edK~~VL~eL~rvLKPGGvLVvR 239 (535)
+..-.. ...+.+...|+.|-.+++.
T Consensus 77 i~tp~~------~h~~~~~~al~~G~~v~~e 101 (346)
T 3cea_A 77 IVAPTP------FHPEMTIYAMNAGLNVFCE 101 (346)
T ss_dssp ECSCGG------GHHHHHHHHHHTTCEEEEC
T ss_pred EeCChH------hHHHHHHHHHHCCCEEEEc
Confidence 874432 2233444567777666663
No 496
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.18 E-value=0.22 Score=52.91 Aligned_cols=102 Identities=13% Similarity=0.160 Sum_probs=63.6
Q ss_pred CCEEEEEccCCChh-hHHHHHhhcCCCcEEEEEeCChhHHHHHHH------------HHhhcCCcCCCeEEEEccccccc
Q 041205 132 LKKVAFVGSGPMPL-TSIILASQHMKSTHFDNIDIDETANNLARR------------IVSSDDEIEKRMKFLTCDIMEVK 198 (535)
Q Consensus 132 pkRVLeIGSGplPl-TAI~LAk~~l~Ga~VtGIDIDpeAIelAR~------------li~~lG~Ls~rI~Fi~GDA~el~ 198 (535)
-.+|.-||.|=+|+ +|.+||+ .|-+|+|+|+|++.++.=++ ++++.- -+.+++|. .|..+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~---~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~-~~g~l~~t-t~~~~-- 93 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFAL---LGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRAL-SSGRLSFA-ESAEE-- 93 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---HTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHH-HTTCEEEC-SSHHH--
T ss_pred CCEEEEEccCHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHH-HcCCeeEE-cCHHH--
Confidence 36899999998886 5677887 57899999999998876432 222110 01355552 33222
Q ss_pred cCCCCcceEEecccc-----CC--hhhHHHHHHHHHhhccc---CeEEEEEcc
Q 041205 199 EKLGEYDCIILAALA-----GN--EEEKAKILGHIRKYMKE---GGVLLVRSA 241 (535)
Q Consensus 199 ~dL~~FDvVfiaALV-----gm--~edK~~VL~eL~rvLKP---GGvLVvRsa 241 (535)
.....|++|+.--- +- ...-..+.+.+.+.|++ |.++++.+.
T Consensus 94 -ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eST 145 (444)
T 3vtf_A 94 -AVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKST 145 (444)
T ss_dssp -HHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSC
T ss_pred -HHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCC
Confidence 12346888875211 00 12346677888888875 457777774
No 497
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=92.09 E-value=0.11 Score=52.75 Aligned_cols=90 Identities=12% Similarity=0.026 Sum_probs=59.8
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
-.+++|..||.|.+|.+....++ ..|.+|+++|.++.. + .....| . ++ .+..++ +...|+|++
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~--~~G~~V~~~d~~~~~-~----~~~~~g-~----~~--~~l~el---l~~aDvV~l 225 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQ--SFGMKTIGYDPIISP-E----VSASFG-V----QQ--LPLEEI---WPLCDFITV 225 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHH--TTTCEEEEECSSSCH-H----HHHHTT-C----EE--CCHHHH---GGGCSEEEE
T ss_pred CCcCEEEEEeECHHHHHHHHHHH--HCCCEEEEECCCcch-h----hhhhcC-c----ee--CCHHHH---HhcCCEEEE
Confidence 46789999999999888766666 368999999998765 2 233456 2 22 233332 246899998
Q ss_pred ccccCChhhHHHHH-HHHHhhcccCeEEEE
Q 041205 210 AALAGNEEEKAKIL-GHIRKYMKEGGVLLV 238 (535)
Q Consensus 210 aALVgm~edK~~VL-~eL~rvLKPGGvLVv 238 (535)
..-.. ++-..++ +...+.||||++|+-
T Consensus 226 ~~P~t--~~t~~li~~~~l~~mk~gailIN 253 (335)
T 2g76_A 226 HTPLL--PSTTGLLNDNTFAQCKKGVRVVN 253 (335)
T ss_dssp CCCCC--TTTTTSBCHHHHTTSCTTEEEEE
T ss_pred ecCCC--HHHHHhhCHHHHhhCCCCcEEEE
Confidence 64442 2223334 456778999987754
No 498
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=91.94 E-value=0.13 Score=64.48 Aligned_cols=103 Identities=12% Similarity=0.033 Sum_probs=71.3
Q ss_pred hCCCCCCEEEEEc-cCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCe-EEEEccccc-ccc--CC
Q 041205 127 TGVAQLKKVAFVG-SGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRM-KFLTCDIME-VKE--KL 201 (535)
Q Consensus 127 ~~l~~pkRVLeIG-SGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI-~Fi~GDA~e-l~~--dL 201 (535)
..+.++++||-.| +|++|..++.+|+. .|++|++++.+++..+.+++....+| . +.| .....|..+ +.. .-
T Consensus 1663 a~l~~Ge~VLI~gaaGgVG~aAiqlAk~--~Ga~Viat~~s~~k~~~l~~~~~~lg-a-~~v~~~~~~~~~~~i~~~t~g 1738 (2512)
T 2vz8_A 1663 GRMQPGESVLIHSGSGGVGQAAIAIALS--RGCRVFTTVGSAEKRAYLQARFPQLD-E-TCFANSRDTSFEQHVLRHTAG 1738 (2512)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTCC-S-TTEEESSSSHHHHHHHHTTTS
T ss_pred hcCCCCCEEEEEeCChHHHHHHHHHHHH--cCCEEEEEeCChhhhHHHHhhcCCCC-c-eEEecCCCHHHHHHHHHhcCC
Confidence 3578999999996 59999999999994 68999999999988888776554445 2 222 111111111 111 11
Q ss_pred CCcceEEeccccCChhhHHHHHHHHHhhcccCeEEEEEc
Q 041205 202 GEYDCIILAALAGNEEEKAKILGHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 202 ~~FDvVfiaALVgm~edK~~VL~eL~rvLKPGGvLVvRs 240 (535)
.++|+|+-. . + ...+....+.|+|||+++.-.
T Consensus 1739 ~GvDvVld~-~-g-----~~~l~~~l~~L~~~Gr~V~iG 1770 (2512)
T 2vz8_A 1739 KGVDLVLNS-L-A-----EEKLQASVRCLAQHGRFLEIG 1770 (2512)
T ss_dssp CCEEEEEEC-C-C-----HHHHHHHHTTEEEEEEEEECC
T ss_pred CCceEEEEC-C-C-----chHHHHHHHhcCCCcEEEEee
Confidence 359999864 2 2 345888999999999988743
No 499
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=91.91 E-value=0.08 Score=52.91 Aligned_cols=91 Identities=18% Similarity=0.175 Sum_probs=59.3
Q ss_pred CCCCEEEEEccCCChhhHHHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEEe
Q 041205 130 AQLKKVAFVGSGPMPLTSIILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCIIL 209 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTAI~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVfi 209 (535)
-.+++|..||.|.+|.+....++. .|.+|+++|.+++. +.+ ...| . ++ .+..++. ...|+|++
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~--~G~~V~~~d~~~~~-~~~----~~~g-~----~~--~~l~ell---~~aDvV~l 202 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANA--LGMNILLYDPYPNE-ERA----KEVN-G----KF--VDLETLL---KESDVVTI 202 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCCH-HHH----HHTT-C----EE--CCHHHHH---HHCSEEEE
T ss_pred cCCceEEEEccCHHHHHHHHHHHH--CCCEEEEECCCCCh-hhH----hhcC-c----cc--cCHHHHH---hhCCEEEE
Confidence 467899999999998887666663 58999999999876 322 3445 2 22 2333322 35799998
Q ss_pred ccccCChhhHHHHH-HHHHhhcccCeEEEEE
Q 041205 210 AALAGNEEEKAKIL-GHIRKYMKEGGVLLVR 239 (535)
Q Consensus 210 aALVgm~edK~~VL-~eL~rvLKPGGvLVvR 239 (535)
..-.. ++-..++ +.....||||++|+--
T Consensus 203 ~~p~~--~~t~~li~~~~l~~mk~ga~lin~ 231 (307)
T 1wwk_A 203 HVPLV--ESTYHLINEERLKLMKKTAILINT 231 (307)
T ss_dssp CCCCS--TTTTTCBCHHHHHHSCTTCEEEEC
T ss_pred ecCCC--hHHhhhcCHHHHhcCCCCeEEEEC
Confidence 64432 2222333 3456689999887653
No 500
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.88 E-value=0.11 Score=51.14 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=59.4
Q ss_pred CCCCEEEEEccCCChhhH-HHHHhhcCCCcEEEEEeCChhHHHHHHHHHhhcCCcCCCeEEEEccccccccCCCCcceEE
Q 041205 130 AQLKKVAFVGSGPMPLTS-IILASQHMKSTHFDNIDIDETANNLARRIVSSDDEIEKRMKFLTCDIMEVKEKLGEYDCII 208 (535)
Q Consensus 130 ~~pkRVLeIGSGplPlTA-I~LAk~~l~Ga~VtGIDIDpeAIelAR~li~~lG~Ls~rI~Fi~GDA~el~~dL~~FDvVf 208 (535)
..-++|.+||+|.+|.+- ..|++ .|..|+++|++++.++... ..| . .+ ..+..++. ...|+||
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~---~G~~V~~~dr~~~~~~~l~----~~g-~----~~-~~~~~~~~---~~aDvvi 82 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLK---NGFKVTVWNRTLSKCDELV----EHG-A----SV-CESPAEVI---KKCKYTI 82 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSSGGGGHHHH----HTT-C----EE-CSSHHHHH---HHCSEEE
T ss_pred ccCCEEEEECccHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHH----HCC-C----eE-cCCHHHHH---HhCCEEE
Confidence 345799999999888753 33334 5789999999998876654 335 2 22 23333222 3479999
Q ss_pred eccccCChhhHHHHH---HHHHhhcccCeEEEEEc
Q 041205 209 LAALAGNEEEKAKIL---GHIRKYMKEGGVLLVRS 240 (535)
Q Consensus 209 iaALVgm~edK~~VL---~eL~rvLKPGGvLVvRs 240 (535)
+.-... ..-..++ +.+...+++|.+|+--+
T Consensus 83 ~~vp~~--~~~~~v~~~~~~l~~~l~~g~~vv~~s 115 (310)
T 3doj_A 83 AMLSDP--CAALSVVFDKGGVLEQICEGKGYIDMS 115 (310)
T ss_dssp ECCSSH--HHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred EEcCCH--HHHHHHHhCchhhhhccCCCCEEEECC
Confidence 853221 2334556 66778889988776644
Done!