Your job contains 1 sequence.
>041206
MAGRTMVDDDDEHKHSEGGETMMSDDDDLMKGRAEEREEMFGFGLAAMAIRVCNNWISDS
CVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRV
SVWDRDSGRCVNVITNGAEIGCLISEGSWVFLGLPNAVKSWRVNAASVNALVVNNDLLFA
GSEGGVISVWKGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRT
WNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGMLD
AEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLFFPGDASGSVGVWK
WLLAEQQKMET
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041206
(371 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2131799 - symbol:ZFWD1 "zinc finger WD40 repea... 613 8.1e-60 1
TAIR|locus:2164456 - symbol:AT5G40880 species:3702 "Arabi... 543 2.1e-52 1
TAIR|locus:2173103 - symbol:AT5G51980 species:3702 "Arabi... 523 2.8e-50 1
TAIR|locus:2155904 - symbol:AT5G49200 species:3702 "Arabi... 403 1.5e-37 1
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 147 3.0e-10 2
TAIR|locus:2015423 - symbol:AT1G47610 "AT1G47610" species... 170 3.1e-10 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 102 6.3e-09 3
ZFIN|ZDB-GENE-070112-2212 - symbol:traf7 "TNF receptor-as... 110 8.3e-09 2
DICTYBASE|DDB_G0286735 - symbol:DDB_G0286735 "C3HC4-type ... 162 9.5e-09 1
UNIPROTKB|F1NEH1 - symbol:TRAF7 "Uncharacterized protein"... 110 1.9e-08 2
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 112 2.7e-08 2
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 112 2.7e-08 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 125 3.2e-08 2
CGD|CAL0002484 - symbol:CDC4 species:5476 "Candida albica... 127 5.1e-08 2
UNIPROTKB|Q5A9A6 - symbol:CDC4 "Potential ubiquitin ligas... 127 5.1e-08 2
CGD|CAL0004039 - symbol:orf19.3301 species:5476 "Candida ... 126 7.3e-08 2
DICTYBASE|DDB_G0290687 - symbol:mhkC "myosin heavy chain ... 123 9.2e-08 2
MGI|MGI:3042141 - symbol:Traf7 "TNF receptor-associated f... 110 1.2e-07 2
RGD|1559653 - symbol:Traf7 "TNF receptor-associated facto... 110 1.4e-07 2
TAIR|locus:2127408 - symbol:EMB2271 "AT4G21130" species:3... 124 1.6e-07 2
UNIPROTKB|Q5EA56 - symbol:TRAF7 "Uncharacterized protein"... 110 1.6e-07 2
UNIPROTKB|E2QXW8 - symbol:TRAF7 "Uncharacterized protein"... 110 1.6e-07 2
DICTYBASE|DDB_G0291231 - symbol:mhkA "myosin heavy chain ... 153 1.8e-07 1
UNIPROTKB|I3LMJ3 - symbol:LOC100738291 "Uncharacterized p... 110 2.1e-07 2
DICTYBASE|DDB_G0292592 - symbol:lst8 "WD40 repeat-contain... 144 2.1e-07 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 103 2.4e-07 3
UNIPROTKB|Q6Q0C0 - symbol:TRAF7 "E3 ubiquitin-protein lig... 110 2.6e-07 2
UNIPROTKB|F1P0J6 - symbol:TRAF7 "Uncharacterized protein"... 99 3.0e-07 2
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 100 3.3e-07 2
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 100 3.5e-07 2
UNIPROTKB|F1RFA9 - symbol:TRAF7 "Uncharacterized protein"... 110 4.1e-07 2
DICTYBASE|DDB_G0282489 - symbol:mhkD "putative myosin hea... 152 5.4e-07 2
ASPGD|ASPL0000005121 - symbol:nudF species:162425 "Emeric... 111 5.6e-07 2
UNIPROTKB|Q00664 - symbol:nudF "Nuclear distribution prot... 111 5.6e-07 2
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 100 8.0e-07 3
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 100 9.2e-07 2
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 100 9.2e-07 2
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 100 9.9e-07 3
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 100 1.1e-06 2
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 100 1.1e-06 2
CGD|CAL0000124 - symbol:ASC1 species:5476 "Candida albica... 102 1.2e-06 2
UNIPROTKB|P83774 - symbol:ASC1 "Guanine nucleotide-bindin... 102 1.2e-06 2
UNIPROTKB|G4MZP1 - symbol:MGG_07030 "Uncharacterized prot... 98 2.7e-06 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 100 2.8e-06 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 101 3.7e-06 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 89 3.9e-06 2
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 94 4.4e-06 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 100 4.7e-06 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 100 4.7e-06 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 100 4.7e-06 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 100 4.7e-06 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 100 4.7e-06 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 100 4.7e-06 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 100 4.7e-06 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 100 4.7e-06 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 100 4.7e-06 2
UNIPROTKB|D6RFX4 - symbol:GNB2L1 "Guanine nucleotide-bind... 100 5.0e-06 2
TAIR|locus:2115984 - symbol:YAO "AT4G05410" species:3702 ... 98 6.0e-06 3
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 100 6.3e-06 2
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 100 6.3e-06 2
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 100 6.3e-06 2
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 100 6.4e-06 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 94 6.4e-06 2
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 100 6.5e-06 2
ASPGD|ASPL0000014385 - symbol:cpcB species:162425 "Emeric... 115 7.2e-06 2
WB|WBGene00017178 - symbol:atg-16.1 species:6239 "Caenorh... 135 7.3e-06 1
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 93 7.5e-06 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 101 7.7e-06 2
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 98 7.8e-06 2
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 101 8.0e-06 3
POMBASE|SPCC126.01c - symbol:SPCC126.01c "conserved funga... 109 9.0e-06 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 100 9.5e-06 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 101 1.0e-05 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 101 1.0e-05 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 101 1.0e-05 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 101 1.0e-05 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 101 1.0e-05 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 101 1.0e-05 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 100 1.2e-05 2
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 112 1.2e-05 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 98 1.3e-05 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 99 1.6e-05 2
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 123 1.7e-05 2
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 89 1.8e-05 2
TAIR|locus:2063099 - symbol:AT2G40360 "AT2G40360" species... 96 2.0e-05 4
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 94 2.3e-05 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 92 2.3e-05 2
TAIR|locus:2066276 - symbol:AT2G26490 "AT2G26490" species... 129 2.4e-05 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 95 2.5e-05 2
UNIPROTKB|O43818 - symbol:RRP9 "U3 small nucleolar RNA-in... 105 2.6e-05 2
SGD|S000003648 - symbol:MDV1 "Peripheral protein of cytos... 111 2.6e-05 2
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 94 3.0e-05 2
SGD|S000001308 - symbol:MET30 "F-box protein containing f... 115 3.8e-05 2
POMBASE|SPAC4D7.03 - symbol:pop2 "F-box/WD repeat protein... 101 3.8e-05 2
ZFIN|ZDB-GENE-030131-6305 - symbol:fbxw11a "F-box and WD-... 92 4.4e-05 2
UNIPROTKB|P63247 - symbol:GNB2L1 "Guanine nucleotide-bind... 100 4.5e-05 2
UNIPROTKB|P63243 - symbol:GNB2L1 "Guanine nucleotide-bind... 100 4.5e-05 2
UNIPROTKB|F1PLR0 - symbol:GNB2L1 "Uncharacterized protein... 100 4.5e-05 2
UNIPROTKB|P63244 - symbol:GNB2L1 "Guanine nucleotide-bind... 100 4.5e-05 2
UNIPROTKB|P63246 - symbol:GNB2L1 "Guanine nucleotide-bind... 100 4.5e-05 2
WARNING: Descriptions of 100 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2131799 [details] [associations]
symbol:ZFWD1 "zinc finger WD40 repeat protein 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR000571
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00642
PROSITE:PS50082 PROSITE:PS50103 PROSITE:PS50294 SMART:SM00320
SMART:SM00356 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AL079350
EMBL:AJ252063 EMBL:BT026122 IPI:IPI00530759 RefSeq:NP_194274.2
UniGene:At.32255 ProteinModelPortal:Q9FNZ2 SMR:Q9FNZ2 IntAct:Q9FNZ2
STRING:Q9FNZ2 PRIDE:Q9FNZ2 EnsemblPlants:AT4G25440.1 GeneID:828649
KEGG:ath:AT4G25440 GeneFarm:3766 TAIR:At4g25440
HOGENOM:HOG000239729 InParanoid:Q9FNZ2 OMA:WNTQTNT PhylomeDB:Q9FNZ2
ProtClustDB:CLSN2687444 Genevestigator:Q9FNZ2 Uniprot:Q9FNZ2
Length = 430
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 130/332 (39%), Positives = 185/332 (55%)
Query: 51 RVCNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNK 110
++C W+ +C YGDKCR+LH W GD S + L +L+GH+K VT + LPSGS+K
Sbjct: 106 KLCKFWVDGNCPYGDKCRYLHCWSK---GD----SFSLLTQLDGHQKVVTGIALPSGSDK 158
Query: 111 LYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVFLGLPNAVKSWRXXXXXXXX 170
LY+ S+D V +WD SG+C V+ G E+GC+ISEG W+ +G+PN VK+W
Sbjct: 159 LYTASKDETVRIWDCASGQCTGVLNLGGEVGCIISEGPWLLVGMPNLVKAWNIQNNADLS 218
Query: 171 XXX----------XXXXXXXGSEGGVISVWKGTFVANPFKQVASIRA-PLWFCSLSSSND 219
G++ G I VW+ + F AS+ L SL +
Sbjct: 219 LNGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGAN 278
Query: 220 TRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIK 279
++ + ++ + W+LDNL+C+QTL H+ V SL+ WD++L S SLD T+K
Sbjct: 279 RLYSGAMDNSI--------KVWSLDNLQCIQTLTEHTSVVMSLICWDQFLLSCSLDNTVK 330
Query: 280 IWL----------YTHTKNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR 329
IW YTH + L+ L G+ DAEAKPVL S D+++ LY+LPSF R +
Sbjct: 331 IWAATEGGNLEVTYTHKEEYGVLA-LCGVHDAEAKPVLLCSCNDNSLHLYDLPSFTERGK 389
Query: 330 IFSRREVEVDQIGPAGLFFPGDASGSVGVWKW 361
I +++E+ QIGP G+FF GD SG V VWKW
Sbjct: 390 ILAKQEIRSIQIGPGGIFFTGDGSGQVKVWKW 421
>TAIR|locus:2164456 [details] [associations]
symbol:AT5G40880 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000571 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00642 PROSITE:PS50082 PROSITE:PS50103
PROSITE:PS50294 SMART:SM00320 SMART:SM00356 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB011477 HOGENOM:HOG000239729 EMBL:BT030400 EMBL:AJ252065
IPI:IPI00524162 RefSeq:NP_198904.1 UniGene:At.25457
UniGene:At.30265 ProteinModelPortal:Q9FKR9 SMR:Q9FKR9 STRING:Q9FKR9
PRIDE:Q9FKR9 EnsemblPlants:AT5G40880.1 GeneID:834089
KEGG:ath:AT5G40880 GeneFarm:3785 TAIR:At5g40880 InParanoid:Q9FKR9
OMA:AALEGHK PhylomeDB:Q9FKR9 ProtClustDB:CLSN2686199
Genevestigator:Q9FKR9 Uniprot:Q9FKR9
Length = 472
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 130/328 (39%), Positives = 176/328 (53%)
Query: 52 VCNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKL 111
VCN W +C G+KC+FLHSW + LA + L GHK + + LP GS+KL
Sbjct: 150 VCNFWKDGNCKKGEKCQFLHSW-------SCFPGLAMVAALEGHKNDIKGIALPQGSDKL 202
Query: 112 YSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVFLGLPNAVKSWRXXXXXXX-- 169
+S S DG + +WD +SG+CV I AE G LISEG WVFLGLPNAVK++
Sbjct: 203 FSVSGDGTLLIWDCNSGQCVRSINLQAEAGSLISEGPWVFLGLPNAVKAFNVQNSKDVHL 262
Query: 170 --------XXXXXXXXXXXGSEGGVISVWKGT-FVANPFKQVASIRAPLWFCSLSSSNDT 220
G+ G I VWK T ++PFK + S+ S T
Sbjct: 263 EGVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGH------HSGEVT 316
Query: 221 RWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKI 280
+ E T + W+L+ L+C TLK H TVTSLL WD+ L SSSLD TIK+
Sbjct: 317 CFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDKCLISSSLDGTIKL 376
Query: 281 WLYTHTKN-------NAELS--SLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIF 331
W + ++ ELS +L GM DAEAKP++F S ++ A+ +++LPSF+ R ++F
Sbjct: 377 WACSENESLKVVQTRKQELSVHTLCGMHDAEAKPIMFCSYQNGAVGIFDLPSFEERGKMF 436
Query: 332 SRREVEVDQIGPAGLFFPGDASGSVGVW 359
S + + IGP GL F GD SG++ VW
Sbjct: 437 STQTICTLTIGPGGLLFSGDKSGNLRVW 464
>TAIR|locus:2173103 [details] [associations]
symbol:AT5G51980 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000571 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50103
PROSITE:PS50294 SMART:SM00320 SMART:SM00356 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB015478 HOGENOM:HOG000239729 ProtClustDB:CLSN2687444
EMBL:AJ252064 EMBL:BX831861 IPI:IPI00541710 IPI:IPI00657147
RefSeq:NP_001032059.1 RefSeq:NP_200011.1 UniGene:At.29648
UniGene:At.9328 ProteinModelPortal:Q9FNZ1 SMR:Q9FNZ1 STRING:Q9FNZ1
PaxDb:Q9FNZ1 PRIDE:Q9FNZ1 EnsemblPlants:AT5G51980.2 GeneID:835273
KEGG:ath:AT5G51980 GeneFarm:3786 TAIR:At5g51980 InParanoid:Q9FJ94
OMA:ATNCFEP PhylomeDB:Q9FNZ1 Genevestigator:Q9FNZ1 Uniprot:Q9FNZ1
Length = 443
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 117/311 (37%), Positives = 167/311 (53%)
Query: 51 RVCNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNK 110
+VCN W+ +C YGDKCR+LH W G+ S A L +L+GH+K V+ + LPSGS+K
Sbjct: 113 KVCNFWVDGNCTYGDKCRYLHCWSK---GE----SFALLTQLDGHEKLVSGIALPSGSDK 165
Query: 111 LYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVFLGLPNAVKSWRXXXXXXXX 170
LY+GS+D + VWD SG+C V+ G EIGC++SEG W+ +G+PN VK+W
Sbjct: 166 LYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVLSEGPWLLVGMPNLVKAWNIETNADQS 225
Query: 171 XXX----------XXXXXXXGSEGGVISVWKGTFVANPFKQVASIRA-PLWFCSLSSSND 219
G++ G I W+ N F+ AS+ L +L +
Sbjct: 226 LSGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGAN 285
Query: 220 TRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIK 279
++ + T + W+LDNL+C+QTL HS V SL+ WD++L S SLD T+K
Sbjct: 286 RLYSGSMDK--------TIKVWSLDNLQCIQTLTDHSSVVMSLICWDQFLLSCSLDNTVK 337
Query: 280 IWL----------YTHTKNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR 329
IW YTH + + L+ L G+ DAEAKPVL + D+ +RLY+LPS L R
Sbjct: 338 IWAAIEGGNLEVTYTHKEEHGVLA-LCGVHDAEAKPVLLCACNDNTLRLYDLPSLGLFIR 396
Query: 330 IFSRREVEVDQ 340
R ++ Q
Sbjct: 397 FTERGKIFAKQ 407
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 77/198 (38%), Positives = 110/198 (55%)
Query: 181 GSEGGVISVWKGTFVANPFKQVASIRA-PLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTR 239
G++ G I W+ N F+ AS+ L +L + ++ + T +
Sbjct: 246 GTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDK--------TIK 297
Query: 240 TWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWL----------YTHTKNN 289
W+LDNL+C+QTL HS V SL+ WD++L S SLD T+KIW YTH + +
Sbjct: 298 VWSLDNLQCIQTLTDHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEH 357
Query: 290 AELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKL------RARIFSRREVEVDQIGP 343
L+ L G+ DAEAKPVL + D+ +RLY+LPS L R +IF+++E+ QIGP
Sbjct: 358 GVLA-LCGVHDAEAKPVLLCACNDNTLRLYDLPSLGLFIRFTERGKIFAKQEIRAIQIGP 416
Query: 344 AGLFFPGDASGSVGVWKW 361
G+FF GD +G V VWKW
Sbjct: 417 GGIFFTGDGTGQVKVWKW 434
>TAIR|locus:2155904 [details] [associations]
symbol:AT5G49200 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000571 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00642 PROSITE:PS50082
PROSITE:PS50103 PROSITE:PS50294 SMART:SM00320 SMART:SM00356
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB016872 HOGENOM:HOG000239729
ProtClustDB:CLSN2686199 EMBL:AJ252066 IPI:IPI00517790
RefSeq:NP_199731.1 UniGene:At.64278 ProteinModelPortal:Q9FE91
SMR:Q9FE91 STRING:Q9FE91 PRIDE:Q9FE91 EnsemblPlants:AT5G49200.1
GeneID:834979 KEGG:ath:AT5G49200 GeneFarm:3799 TAIR:At5g49200
InParanoid:Q9FE91 PhylomeDB:Q9FE91 Genevestigator:Q9FE91
Uniprot:Q9FE91
Length = 419
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 103/298 (34%), Positives = 145/298 (48%)
Query: 4 RTMVDDDDEHKHSEGGETMMSDD---DDLMKGRAEEREEMFGFGLAAMAIRVCNNWISDS 60
R++V E+K EG ++D + G A + +++ VC W
Sbjct: 43 RSLVWTSKEYKSPEGNNMPRTNDVSPKPPVLGLARKNAACGPMRSSSLRKWVCKYWKDGK 102
Query: 61 CVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRV 120
C G++C+FLHSW + LA + L GH K + + LP GS+KL+S S DG +
Sbjct: 103 CKRGEQCQFLHSW-------SCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTL 155
Query: 121 SVWDRDSGRCVNVITNGAEIGCLISEGSWVFLGLPNAVKSWRXXXXXXX----------- 169
VWD +SG+CV+ I AE G LISEG WVFLGLPNA+K++
Sbjct: 156 RVWDCNSGQCVHSINLDAEAGSLISEGPWVFLGLPNAIKAFNVQTSQDLHLQAAGVVGQV 215
Query: 170 -XXXXXXXXXXXGSEGGVISVWKGTF--VANPFKQVASIRAPLWFCSLSSSNDTRWNSKE 226
G+ G I VWK T ++PFK + S+ S T +
Sbjct: 216 NAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEG-------HSGEVTCFAVGG 268
Query: 227 EAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYT 284
+ T + W+L+ L+C+ TLK H+ TVTSLL WD+ L SSSLD TIK+W Y+
Sbjct: 269 QMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDKCLISSSLDGTIKVWAYS 326
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 73/191 (38%), Positives = 105/191 (54%)
Query: 181 GSEGGVISVWKGTF--VANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTT 238
G+ G I VWK T ++PFK + S+ S T + + T
Sbjct: 228 GTSSGSILVWKATTDSESDPFKYLTSLEG-------HSGEVTCFAVGGQMLYSGSVDKTI 280
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLY----------THTKN 288
+ W+L+ L+C+ TLK H+ TVTSLL WD+ L SSSLD TIK+W Y T +
Sbjct: 281 KMWDLNTLQCIMTLKQHTGTVTSLLCWDKCLISSSLDGTIKVWAYSENGILKVVQTRRQE 340
Query: 289 NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLFF 348
+ + +L GM DAEAKP++F S ++ + +++LPSF+ R R+FS + IGP GL F
Sbjct: 341 QSSVHALSGMHDAEAKPIIFCSYQNGTVGIFDLPSFQERGRMFSTHTIATLTIGPQGLLF 400
Query: 349 PGDASGSVGVW 359
GD SG++ VW
Sbjct: 401 SGDESGNLRVW 411
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 147 (56.8 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 245 NLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGMLDAEAK 304
N+ECVQTLKGH V S+ + D+YLFS S D +IK+W + +L +F L+ K
Sbjct: 491 NMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVW------DLKKLRCIF-TLEGHDK 543
Query: 305 PV---------LFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLF-FPGDASG 354
PV LFS D I++++L + + + + S V + +G + F G
Sbjct: 544 PVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARA-VKTLCISGQYLFSGSNDK 602
Query: 355 SVGVW 359
++ VW
Sbjct: 603 TIKVW 607
Score = 146 (56.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 33/92 (35%), Positives = 51/92 (55%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-LYT-HTKNNAELS 293
H+ + W+L L C+ TL+GH V ++L D+YLFS S D+TIK+W L T K E
Sbjct: 522 HSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESH 581
Query: 294 SLFGMLDAEAKPVLFSSGKDSAIRLYELPSFK 325
+ + LFS D I++++L +F+
Sbjct: 582 ARAVKTLCISGQYLFSGSNDKTIKVWDLKTFR 613
Score = 129 (50.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-LYT----HT-KNNA 290
T + W+L LEC TL+ H+ V +L +YLFS S D+TIK+W L T +T K +
Sbjct: 563 TIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHT 622
Query: 291 ELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSR-REVEVDQIGPAGLFFP 349
+ + +L L+S D IR++ L S + A + R VE I LF
Sbjct: 623 KWVTTICILGTN----LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTA 678
Query: 350 GDASGSVGVW 359
D ++ +W
Sbjct: 679 SD-DNTIKIW 687
Score = 128 (50.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 31/87 (35%), Positives = 44/87 (50%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T R WNL +LEC TL+GH V ++ D+ LF++S D TIKIW + N L
Sbjct: 643 TIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHN 702
Query: 297 GMLDA----EAKPVLFSSGKDSAIRLY 319
+ E K + S D +IR++
Sbjct: 703 ATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 116 (45.9 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 25/91 (27%), Positives = 48/91 (52%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T + W+L C TLKGH+ VT++ L+S S D+TI++W + +A L
Sbjct: 603 TIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLECSATLRGHD 662
Query: 297 GMLD--AEAKPVLFSSGKDSAIRLYELPSFK 325
++ +LF++ D+ I++++L + +
Sbjct: 663 RWVEHMVICDKLLFTASDDNTIKIWDLETLR 693
Score = 101 (40.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEY--LFSSSLDETIKIW 281
+T + W+L+ L C TL+GH+ TV L W++ + S S D++I++W
Sbjct: 682 NTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 95 (38.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 31/105 (29%), Positives = 46/105 (43%)
Query: 59 DSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDG 118
+S Y D+ F S HS+ + L + L GH K V V L L+SGS D
Sbjct: 506 ESICYNDQYLFSGSSDHSIKVWDL-KKLRCIFTLEGHDKPVHTVLL--NDKYLFSGSSDK 562
Query: 119 RVSVWDRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPN-AVKSW 161
+ VWD + C + + A + L G ++F G + +K W
Sbjct: 563 TIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVW 607
Score = 74 (31.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 19/84 (22%), Positives = 38/84 (45%)
Query: 80 DNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGA 138
D + ++ + L GH+ V ++ L+SGS D + VWD RC+ + +
Sbjct: 486 DYKSQNMECVQTLKGHEGPVESICY--NDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDK 543
Query: 139 EIGCLISEGSWVFLGLPN-AVKSW 161
+ ++ ++F G + +K W
Sbjct: 544 PVHTVLLNDKYLFSGSSDKTIKVW 567
Score = 73 (30.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRC 130
L GH K VT + + G+N LYSGS D + VW+ S C
Sbjct: 618 LKGHTKWVTTICI-LGTN-LYSGSYDKTIRVWNLKSLEC 654
Score = 67 (28.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRC 130
L H +AV + + SG L+SGS D + VWD + RC
Sbjct: 578 LESHARAVKTLCI-SGQY-LFSGSNDKTIKVWDLKTFRC 614
Score = 45 (20.9 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 109 NKLYSGSRDGRVSVWDRDSGR--CVNVITNGAE--IGCLISEGSWVFLGLPN-AVKSW 161
N L++G D + V+D S CV + G E + + ++F G + ++K W
Sbjct: 471 NLLFTGCSDNSIRVYDYKSQNMECVQTL-KGHEGPVESICYNDQYLFSGSSDHSIKVW 527
>TAIR|locus:2015423 [details] [associations]
symbol:AT1G47610 "AT1G47610" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC007519 HOGENOM:HOG000236376 ProtClustDB:CLSN2681936
IPI:IPI00534811 PIR:A96517 RefSeq:NP_175192.1 UniGene:At.47680
ProteinModelPortal:Q9SX94 SMR:Q9SX94 STRING:Q9SX94
EnsemblPlants:AT1G47610.1 GeneID:841170 KEGG:ath:AT1G47610
TAIR:At1g47610 InParanoid:Q9SX94 OMA:CVWRRDG PhylomeDB:Q9SX94
Genevestigator:Q9SX94 Uniprot:Q9SX94
Length = 351
Score = 170 (64.9 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 60/272 (22%), Positives = 114/272 (41%)
Query: 104 LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCL-ISEGSWVFLGLPNA-VKSW 161
L + ++ LY+GS + + VW ++ +N + + IS + VF G + ++ W
Sbjct: 30 LAATNDLLYTGSDNNYIRVW-KNLNEFSGFKSNSGLVKAIVISREAKVFTGHQDGKIRVW 88
Query: 162 RXXXXXXXXXXXXXXXXXXGSEGGVISVWKGTFVANPFKQVASIRAPLWFCSLSSSNDTR 221
+ GS + V K + + + +V R LW S +
Sbjct: 89 KTSSKNPRVYTRA------GSLPALKDVLKSSVKPSNYVEVRRCRTALWI-KHSDAVSCL 141
Query: 222 WNSKEEAAVFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKI 280
++++ ++ T + W + +L+C++++K H D V S+ + +F+ S D T+K+
Sbjct: 142 SLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAESLVFTGSADGTVKV 201
Query: 281 WLYTHTKNNAELSSLFGMLDAEAKPV---------LFSSGKDSAIRLYELPSFKL--RAR 329
W + SLF L + V ++S D A+ +E+ KL
Sbjct: 202 WK-REIRGKRTAHSLFQTLLKQESAVTALVTSHMAVYSGSSDGAVNFWEMGDKKLLKHCE 260
Query: 330 IFSRREVEVDQIGPAG-LFFPGDASGSVGVWK 360
+F + + V I AG L F G A + VW+
Sbjct: 261 VFKKHRLAVLCIAAAGKLLFSGAADKKICVWR 292
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 102 (41.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 222 WNSKEEAAVFEFCGHTTRT---WNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETI 278
W+S+ + G T RT WN + EC+ TL GH+ TV + ++ + S S D T+
Sbjct: 478 WSSQMRDNII-ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 536
Query: 279 KIW 281
++W
Sbjct: 537 RVW 539
Score = 100 (40.3 bits), Expect = 6.3e-09, Sum P(3) = 6.3e-09
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-LYT----HTKNNAELS 293
+ W+ + C+ TL+GH++ V SL F ++ S SLD +I++W + T HT + S
Sbjct: 577 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-S 635
Query: 294 SLFGMLDAEAKP-VLFSSGKDSAIRLYEL 321
GM E K +L S DS ++++++
Sbjct: 636 LTSGM---ELKDNILVSGNADSTVKIWDI 661
Score = 95 (38.5 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 32/125 (25%), Positives = 54/125 (43%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGM 298
R W+++ C+ TL GH + + D L S + D T+KIW K L +L G
Sbjct: 617 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW---DIKTGQCLQTLQGP 673
Query: 299 LDAEA--------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLFFPG 350
++ K + +S D ++L++L R F R V ++ G G+ +
Sbjct: 674 HKHQSAVTCLQFNKNFVITSSDDGTVKLWDL-----RTGEFIRNLVTLESGGSGGVVWRI 728
Query: 351 DASGS 355
AS +
Sbjct: 729 RASNT 733
Score = 93 (37.8 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 237 TTRTWNLDNLECVQTLKG---HSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W++ +C+QTL+G H VT L F ++ +SS D T+K+W
Sbjct: 655 TVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLW 702
Score = 89 (36.4 bits), Expect = 6.3e-09, Sum P(3) = 6.3e-09
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNG-AEIGCLISEGSWV 150
L GH V + L ++ SGSRD + VWD ++G+C++V+ A + C+ +G V
Sbjct: 510 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV 567
Query: 151 FLGLPN-AVKSW 161
G + VK W
Sbjct: 568 VSGAYDFMVKVW 579
Score = 75 (31.5 bits), Expect = 9.4e-07, Sum P(3) = 9.4e-07
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLISE 146
L L GH V ++ G + + SGS D + VWD ++G C++ +T + G + +
Sbjct: 587 LHTLQGHTNRVYSLQF-DGIH-VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 644
Query: 147 GSWVFLGLPNAVKSW 161
V + VK W
Sbjct: 645 NILVSGNADSTVKIW 659
Score = 65 (27.9 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 68 RFLHSWVHSVDGDNTTN--SLAT---LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSV 122
+F + + S DNT S T L L GH V + + N + SGS D + V
Sbjct: 441 QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--NIIISGSTDRTLKV 498
Query: 123 WDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
W+ ++G C++ + + + + C+ V G +A ++ W
Sbjct: 499 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 539
Score = 64 (27.6 bits), Expect = 6.3e-09, Sum P(3) = 6.3e-09
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 2 AG-RTMVDDDDEHKHSEGGETMMSDDDDLMKGRAEEREE 39
AG R+ DDD + +EG E M D D+ EREE
Sbjct: 145 AGLRSEEDDDRPEEDNEGEEEMDQDSDEFEHSEESEREE 183
Score = 61 (26.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 20/72 (27%), Positives = 33/72 (45%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE-IGCLISEGSWV 150
L GH AV V ++ SG+ D V VWD ++ C++ + + L +G V
Sbjct: 550 LMGHVAAVRCVQYDG--RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHV 607
Query: 151 FLG-LPNAVKSW 161
G L +++ W
Sbjct: 608 VSGSLDTSIRVW 619
Score = 60 (26.2 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 222 WNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWD 266
W+ + E + GHT R ++L + + + G DT S+ WD
Sbjct: 579 WDPETETCLHTLQGHTNRVYSLQ-FDGIHVVSGSLDT--SIRVWD 620
Score = 52 (23.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 6 MVDDDDEHKHSEGGETMMSDDDDLMKGRAEEREE 39
M D DE +HSE E ++D G EE EE
Sbjct: 166 MDQDSDEFEHSEESEREEEEED----GEEEEGEE 195
>ZFIN|ZDB-GENE-070112-2212 [details] [associations]
symbol:traf7 "TNF receptor-associated factor 7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-070112-2212 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:BX572621 EMBL:CR450851 EMBL:BC129220
IPI:IPI00488353 RefSeq:NP_001073654.1 UniGene:Dr.124692
Ensembl:ENSDART00000084579 Ensembl:ENSDART00000132703 GeneID:563746
KEGG:dre:563746 InParanoid:A1L1U9 NextBio:20885047 Uniprot:A1L1U9
Length = 639
Score = 110 (43.8 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 223 NSKEEAAVFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
++ ++ VF + R W++DN+ C QTL H +VT+L LFS ++D T+K+W
Sbjct: 578 STPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 637
Score = 99 (39.9 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 36/104 (34%), Positives = 47/104 (45%)
Query: 61 CVY--GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDG 118
CVY GD F S S+ +T + L GH V + L NKLYSGS D
Sbjct: 372 CVYSTGDLL-FSGSSDKSIKVWDTCTTYKCQKTLEGHDGIV--LALCIQGNKLYSGSADC 428
Query: 119 RVSVWDRDSGRCVNVITNGAEIGC-LISEGSWVFLGLPNAVKSW 161
+ VWD + + VN I C L+S + +F G A+K W
Sbjct: 429 TIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVW 472
Score = 88 (36.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 27/130 (20%), Positives = 58/130 (44%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T + W++ +LECV L+ +V S+ + ++ + + I +W + L+
Sbjct: 509 TIKIWDIRSLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHV 568
Query: 297 GMLDAEA------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFFP 349
G + A A + +FS+ D ++R++ + + + + R + V + + G F
Sbjct: 569 GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNM-ICTQTLLRHQGSVTALAVSRGRLFS 627
Query: 350 GDASGSVGVW 359
G +V VW
Sbjct: 628 GAVDSTVKVW 637
Score = 68 (29.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 104 LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI-TNGAEIGCLISEGSWVFLGL-PNAVKSW 161
L + N LYSGS + +WD S CV+V+ T+G + + + G N + W
Sbjct: 495 LVASQNHLYSGSYQ-TIKIWDIRSLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVW 553
Score = 55 (24.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
GH+ V + + S + L+SGS D + VWD
Sbjct: 363 GHQGPVWCLCVYSTGDLLFSGSSDKSIKVWD 393
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 162 (62.1 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 63/242 (26%), Positives = 107/242 (44%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVF 151
L+GH+ V + + N+L+SGS D + VWD ++ C++V+ + + L+ ++F
Sbjct: 468 LSGHEGIVHTLAVIG--NRLFSGSSDQTIRVWDLETFECLSVLRDDNTVCALVIAAGYLF 525
Query: 152 LGLPNAVKSW--RXXXXXXXXXXXXXXXXXXGSEGG--------VISVWKGTFVANPFKQ 201
G +K W GG V+ VW +AN F+
Sbjct: 526 SGSFQHIKVWDLETFECVQTLKGNSHWVRALTVSGGYLYSGAYNVVRVWD---LAN-FEC 581
Query: 202 VASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTS 261
V +I P S+ S + N + A +E +T WNLD E + L+GH V +
Sbjct: 582 VQTI--PGGSGSIYSLAVS--NRRLLAGTYE---NTIVVWNLDTFEIINKLEGHIGAVYT 634
Query: 262 LLFWDEYLFSSSLDETIKIW---LYTHTKNNAELSSLFGMLDAEAKPVLFSSGKDSAIRL 318
L D+ +S S D TIK+W L N SS+ ++ + +FS D++I++
Sbjct: 635 LAVSDKKFYSGSYDSTIKVWNDSLVCVQTLNRHTSSVESIVVSSG--CVFSGSADNSIKV 692
Query: 319 YE 320
++
Sbjct: 693 WK 694
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 61/278 (21%), Positives = 117/278 (42%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE--IGCLISEGSWVF 151
GH + + + +G L SGS D +V +WD + +C V++ G E + L G+ +F
Sbjct: 430 GHNGPIWCMTVTNGM--LISGSSDMKVKIWDLVTLKCKQVLS-GHEGIVHTLAVIGNRLF 486
Query: 152 LGLPN-AVKSWRXXXXXXXXXXXXXXXXXXGSEGGVISVWKGTFVANPFKQVASIRAPLW 210
G + ++ W + + G + F+ + +
Sbjct: 487 SGSSDQTIRVWDLETFECLSVLRDDNTVCA------LVIAAGYLFSGSFQHIKVWDLETF 540
Query: 211 FCSLSSSNDTRW-NSKEEAAVFEFCG--HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDE 267
C + ++ W + + + + G + R W+L N ECVQT+ G S ++ SL +
Sbjct: 541 ECVQTLKGNSHWVRALTVSGGYLYSGAYNVVRVWDLANFECVQTIPGGSGSIYSLAVSNR 600
Query: 268 YLFSSSLDETIKIW-LYTH---TKNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPS 323
L + + + TI +W L T K + +++ + ++ K +S DS I+++
Sbjct: 601 RLLAGTYENTIVVWNLDTFEIINKLEGHIGAVYTLAVSDKK--FYSGSYDSTIKVWN--D 656
Query: 324 FKLRARIFSRREVEVDQIG-PAGLFFPGDASGSVGVWK 360
+ + +R V+ I +G F G A S+ VWK
Sbjct: 657 SLVCVQTLNRHTSSVESIVVSSGCVFSGSADNSIKVWK 694
>UNIPROTKB|F1NEH1 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000185 "activation of
MAPKKK activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Pfam:PF00097
Prosite:PS00518 GO:GO:0043231 GO:GO:0005886 GO:GO:0006915
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 GO:GO:0000185
OMA:ALCIQGN EMBL:AADN02023658 EMBL:AADN02023655 EMBL:AADN02023656
EMBL:AADN02023657 IPI:IPI00600547 Ensembl:ENSGALT00000009263
ArrayExpress:F1NEH1 Uniprot:F1NEH1
Length = 670
Score = 110 (43.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 223 NSKEEAAVFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
++ ++ VF + R W++DN+ C QTL H +VT+L LFS ++D T+K+W
Sbjct: 609 STPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 96 (38.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 35/104 (33%), Positives = 47/104 (45%)
Query: 61 CVY--GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDG 118
CVY GD F S ++ +T + L GH V + L NKLYSGS D
Sbjct: 403 CVYSIGDLL-FSGSSDKTIKVWDTCTTYKCQKTLEGHDGIV--LALCIQGNKLYSGSADC 459
Query: 119 RVSVWDRDSGRCVNVITNGAEIGC-LISEGSWVFLGLPNAVKSW 161
+ VWD + + VN I C L+S + +F G A+K W
Sbjct: 460 TIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVW 503
Score = 93 (37.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/131 (22%), Positives = 59/131 (45%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAE-LSSL 295
T + W++ NLECV L+ +V S+ + ++ + + I +W TK L+
Sbjct: 540 TIKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVW-DIETKEQVRTLTGH 598
Query: 296 FGMLDAEA------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFF 348
G + A A + +FS+ D ++R++ + + + + R + V + + G F
Sbjct: 599 VGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNM-ICTQTLLRHQGSVTALAVSRGRLF 657
Query: 349 PGDASGSVGVW 359
G +V VW
Sbjct: 658 SGAVDSTVKVW 668
Score = 64 (27.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 104 LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI-TNGAEIGCLISEGSWVFLGL-PNAVKSW 161
L + N LYSGS + +WD + CV+V+ T+G + + + G N + W
Sbjct: 526 LVASQNYLYSGSYQ-TIKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVW 584
Score = 53 (23.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
GH+ V + + S + L+SGS D + VWD
Sbjct: 394 GHQGPVWCLCVYSIGDLLFSGSSDKTIKVWD 424
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 112 (44.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSS 294
T + WN C++TL GH++ V SLLF E + S SLD +I++W +T + ++
Sbjct: 399 TVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVAL 458
Query: 295 LFGMLDAEAKP-----VLFSSGKDSAIRLYEL 321
L G + +L S DS +R++++
Sbjct: 459 LQGHTSLTSGMQLRGNILVSCNADSHVRVWDI 490
Score = 91 (37.1 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 45/145 (31%), Positives = 66/145 (45%)
Query: 24 SDDDDLMKGRAEEREEMFGF-----GLAAMAIRVCNNWISDSCVYGDKCRFLHSWVHSVD 78
SDD+ L ++ E M+ G+ I C +I V G R + W +VD
Sbjct: 273 SDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYI----VSGSTDRTVKVW-STVD 327
Query: 79 GDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NG 137
G SL L L GH V + + +GS L +GSRD + VWD +SGR + + +
Sbjct: 328 G-----SL--LHTLQGHTSTVRCMAM-AGSI-LVTGSRDTTLRVWDVESGRHLATLHGHH 378
Query: 138 AEIGCLISEGSWVFLG-LPNAVKSW 161
A + C+ +G+ V G VK W
Sbjct: 379 AAVRCVQFDGTTVVSGGYDFTVKIW 403
Score = 85 (35.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDE-TIKIW 281
R W++ CV L GH +TSL ++ + ++S D+ T+K+W
Sbjct: 486 RVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW 529
Score = 80 (33.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 26/77 (33%), Positives = 37/77 (48%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT--NGAEIGCLI-S 145
L L+GH AV V G+ + SG D V +W+ +GRC+ +T N L S
Sbjct: 371 LATLHGHHAAVRCVQF-DGTT-VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFES 428
Query: 146 EGSWVFLG-LPNAVKSW 161
E S V G L +++ W
Sbjct: 429 ERSIVCSGSLDTSIRVW 445
Score = 61 (26.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 65 DKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
DK R+L + ++ + N + L GH+ V + + L +GS D + VW
Sbjct: 226 DKSRYLRA--DKIEKNWNANPIMGSAVLRGHEDHVITC-MQIHDDVLVTGSDDNTLKVWC 282
Query: 125 RDSGRCVNVI---TNGAEIGCLISEGSWVFLGLPN-AVKSW 161
D G + + T G + G ++ G + VK W
Sbjct: 283 IDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVW 323
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 112 (44.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSS 294
T + WN C++TL GH++ V SLLF E + S SLD +I++W +T + ++
Sbjct: 399 TVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVAL 458
Query: 295 LFGMLDAEAKP-----VLFSSGKDSAIRLYEL 321
L G + +L S DS +R++++
Sbjct: 459 LQGHTSLTSGMQLRGNILVSCNADSHVRVWDI 490
Score = 91 (37.1 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 45/145 (31%), Positives = 66/145 (45%)
Query: 24 SDDDDLMKGRAEEREEMFGF-----GLAAMAIRVCNNWISDSCVYGDKCRFLHSWVHSVD 78
SDD+ L ++ E M+ G+ I C +I V G R + W +VD
Sbjct: 273 SDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYI----VSGSTDRTVKVW-STVD 327
Query: 79 GDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NG 137
G SL L L GH V + + +GS L +GSRD + VWD +SGR + + +
Sbjct: 328 G-----SL--LHTLQGHTSTVRCMAM-AGSI-LVTGSRDTTLRVWDVESGRHLATLHGHH 378
Query: 138 AEIGCLISEGSWVFLG-LPNAVKSW 161
A + C+ +G+ V G VK W
Sbjct: 379 AAVRCVQFDGTTVVSGGYDFTVKIW 403
Score = 85 (35.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDE-TIKIW 281
R W++ CV L GH +TSL ++ + ++S D+ T+K+W
Sbjct: 486 RVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW 529
Score = 80 (33.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 26/77 (33%), Positives = 37/77 (48%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT--NGAEIGCLI-S 145
L L+GH AV V G+ + SG D V +W+ +GRC+ +T N L S
Sbjct: 371 LATLHGHHAAVRCVQF-DGTT-VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFES 428
Query: 146 EGSWVFLG-LPNAVKSW 161
E S V G L +++ W
Sbjct: 429 ERSIVCSGSLDTSIRVW 445
Score = 61 (26.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 65 DKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
DK R+L + ++ + N + L GH+ V + + L +GS D + VW
Sbjct: 226 DKSRYLRA--DKIEKNWNANPIMGSAVLRGHEDHVITC-MQIHDDVLVTGSDDNTLKVWC 282
Query: 125 RDSGRCVNVI---TNGAEIGCLISEGSWVFLGLPN-AVKSW 161
D G + + T G + G ++ G + VK W
Sbjct: 283 IDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVW 323
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 125 (49.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 221 RWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLDETI 278
++NS EE V + R W+L+ + ++TL GH +++SL F EYL S S+D I
Sbjct: 70 QFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNI 129
Query: 279 KIW-------LYTHTKNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIF 331
K+W ++ + + + L D + L S+ DS ++L++L + K+
Sbjct: 130 KLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKW---LASASDDSTVKLWDLIAGKMITEFT 186
Query: 332 SRRE-VEVDQIGPAG-LFFPGDASGSVGVW 359
S V V Q P L G A +V +W
Sbjct: 187 SHTSAVNVVQFHPNEYLLASGSADRTVKLW 216
Score = 78 (32.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 81 NTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYS-GSRDGRVSVWDRDSGRCVNVIT-NGA 138
NTT + L ++ H V+++ L S +L + G D RV++W C+ +T + +
Sbjct: 5 NTTITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTS 64
Query: 139 EIGCL---ISEGSWVFLGLPNAVKSW 161
+GC+ SE V L +++ W
Sbjct: 65 AVGCIQFNSSEERVVAGSLSGSLRLW 90
>CGD|CAL0002484 [details] [associations]
symbol:CDC4 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IGI] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin
ligase complex" evidence=IGI] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IGI] [GO:0044182 "filamentous growth
of a population of unicellular organisms" evidence=IMP] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0007126 "meiosis" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 127 (49.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 32/100 (32%), Positives = 55/100 (55%)
Query: 237 TTRTWNL-DNLECVQTLKGHSDTV--TSLLFWDEYLFSSSLDETIKIWLYTHTKNNAEL- 292
T R W+L D+ C L+GH D V T++ F + FS S+D I +W + + L
Sbjct: 585 TVRVWDLLDDGHCTHVLQGHLDRVYSTAIDFHSKTCFSGSMDSNINVWNFETGELKKVLV 644
Query: 293 --SSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARI 330
+SL G+LD VL S+ D+ +R+++ + +LR+++
Sbjct: 645 GHASLVGLLDL-VDDVLVSAAADATLRIWDAKTGELRSKL 683
Score = 75 (31.5 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 89 LMK-LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCL 143
LMK L GH+ V L N L +GS D V VW+ +G+C ++ + + I CL
Sbjct: 441 LMKVLEGHEGGVW--ALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCL 495
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 111 LYSGSRDGRVSVW 123
L +GSRD + VW
Sbjct: 520 LITGSRDHNIHVW 532
>UNIPROTKB|Q5A9A6 [details] [associations]
symbol:CDC4 "Potential ubiquitin ligase F-box subunit"
species:237561 "Candida albicans SC5314" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=IGI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IGI] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IGI] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 127 (49.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 32/100 (32%), Positives = 55/100 (55%)
Query: 237 TTRTWNL-DNLECVQTLKGHSDTV--TSLLFWDEYLFSSSLDETIKIWLYTHTKNNAEL- 292
T R W+L D+ C L+GH D V T++ F + FS S+D I +W + + L
Sbjct: 585 TVRVWDLLDDGHCTHVLQGHLDRVYSTAIDFHSKTCFSGSMDSNINVWNFETGELKKVLV 644
Query: 293 --SSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARI 330
+SL G+LD VL S+ D+ +R+++ + +LR+++
Sbjct: 645 GHASLVGLLDL-VDDVLVSAAADATLRIWDAKTGELRSKL 683
Score = 75 (31.5 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 89 LMK-LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCL 143
LMK L GH+ V L N L +GS D V VW+ +G+C ++ + + I CL
Sbjct: 441 LMKVLEGHEGGVW--ALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCL 495
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 111 LYSGSRDGRVSVW 123
L +GSRD + VW
Sbjct: 520 LITGSRDHNIHVW 532
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHT 286
T + W +D+ ECV+TL GH+ V +L+F ++ L S LD TIK+W Y HT
Sbjct: 404 TIKIWKIDSGECVKTLTGHTKGVRALVFDNQKLISGGLDSTIKVWNY-HT 452
Score = 114 (45.2 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 27/94 (28%), Positives = 47/94 (50%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T + WN +C+ T +GH D V S+ F ++ + S S D T+++W H + +L
Sbjct: 444 TIKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIVSGSADHTVRVW---HVDSRT-CYTLR 499
Query: 297 GMLD-------AEAKPVLFSSGKDSAIRLYELPS 323
G D A +FS+ D+ IR++++ S
Sbjct: 500 GHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNS 533
Score = 101 (40.6 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 35/140 (25%), Positives = 60/140 (42%)
Query: 15 HSEGGETMMSDDDDLMKGRAEEREEMFGFGLAAMAIRVCNNWISDSCVYGDKCRFLHSWV 74
H++G ++ D+ L+ G + +++ + I D+ V D F + +
Sbjct: 422 HTKGVRALVFDNQKLISGGLDSTIKVWNYH-TGQCIATYRGH-EDAVVSVD---FTNKSI 476
Query: 75 HSVDGDNTTN----SLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRC 130
S D+T T L GH V +V + S SN ++S S D + +WD +S C
Sbjct: 477 VSGSADHTVRVWHVDSRTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNEC 536
Query: 131 VNV---ITNGAEIG---CLI 144
+ V + N IG C+I
Sbjct: 537 IKVFGGMENNGHIGQVQCII 556
Score = 96 (38.9 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIWLYTHTKNNAELS 293
HT R W++D+ C TL+GH+D V + +FS+S D TI++W N+ E
Sbjct: 483 HTVRVWHVDSRTCY-TLRGHTDWVNHVKIHSASNTIFSASDDTTIRMW----DMNSNECI 537
Query: 294 SLFGMLD 300
+FG ++
Sbjct: 538 KVFGGME 544
Score = 87 (35.7 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 88 TLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE-IGCLISE 146
T+ GH VT L L +GS D + +W DSG CV +T + + L+ +
Sbjct: 375 TIKTFTGHSDGVTC--LQFNRKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFD 432
Query: 147 GSWVFLG-LPNAVKSW 161
+ G L + +K W
Sbjct: 433 NQKLISGGLDSTIKVW 448
Score = 71 (30.1 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-LYT----HTKNNA 290
+T + W++ +C++T GH + V S+ + S + D IK+W L HT +N
Sbjct: 648 NTIKLWDVATGKCIRTQFGHIEGVWSIAADTFRIISGAHDRLIKVWDLQNGKCLHTFSNN 707
Query: 291 ELSSLFGMLDA 301
S G+ D+
Sbjct: 708 SSVSCVGLSDS 718
>DICTYBASE|DDB_G0290687 [details] [associations]
symbol:mhkC "myosin heavy chain kinase C"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0005938 "cell cortex" evidence=IEA;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS;IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0045159 "myosin II
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032154 "cleavage furrow"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0290687
GO:GO:0005524 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
GO:GO:0000910 GO:GO:0005826 GO:GO:0018107 GO:GO:0032154 HSSP:P16649
BRENDA:2.7.11.7 EMBL:AAFI02000166 GO:GO:0031037 GO:GO:0045159
GO:GO:0016905 ProtClustDB:CLSZ2846619 EMBL:AB079663 EMBL:AF079447
RefSeq:XP_635600.1 ProteinModelPortal:Q8MY12
EnsemblProtists:DDB0216199 GeneID:8627781 KEGG:ddi:DDB_G0290687
OMA:NTRSSIL Uniprot:Q8MY12
Length = 780
Score = 123 (48.4 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 37/138 (26%), Positives = 63/138 (45%)
Query: 214 LSSSNDTRWNSKEEAAVFEFCGH-TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSS 272
+ SN+ ++ ++ C T + W++ + ECV+TL GH+ + S+ LFS
Sbjct: 590 IKESNEVNTIFIQDNLLYTGCNDKTVKVWDMRSYECVKTLSGHTRAIKSVCAMGNLLFSG 649
Query: 273 SLDETIKIW-LYTHT--KNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR 329
S D+ I +W L T T N L A +L+S D IR+++L + +
Sbjct: 650 SNDQQIYVWNLATGTILTNFQGHEGWVKTLYAHNN-MLYSGSHDETIRIWDLKTTRCVNT 708
Query: 330 IFSRREVEVDQIGPAGLF 347
I + VE + G+F
Sbjct: 709 IKCKDRVETLHVTNQGIF 726
Score = 77 (32.2 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 108 SNKLYSGSRDGRVSVWDR-DSGRCVNVITNGAEIGCLISEGSW----VFLGLPNAVKSW 161
S +LYSGS DG++ VWD + N+ +G I +I + + G + VK W
Sbjct: 521 SLRLYSGSNDGQIGVWDAVELKHVTNIKAHGKSIRAVIKRPGFDQNILTAGADSLVKEW 579
>MGI|MGI:3042141 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000185 "activation of MAPKKK activity"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=ISA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:3042141 Pfam:PF00097
Prosite:PS00518 GO:GO:0006915 GO:GO:0006355 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016023
GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GO:GO:0000185 GermOnline:ENSMUSG00000052752 HOGENOM:HOG000220840
HOVERGEN:HBG055270 EMBL:BC005649 EMBL:BC008598 IPI:IPI00474463
UniGene:Mm.275150 ProteinModelPortal:Q922B6 SMR:Q922B6
STRING:Q922B6 PaxDb:Q922B6 PRIDE:Q922B6 UCSC:uc008awq.2
NextBio:377255 Bgee:Q922B6 CleanEx:MM_TRAF7 Genevestigator:Q922B6
Uniprot:Q922B6
Length = 594
Score = 110 (43.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 223 NSKEEAAVFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
++ ++ VF + R W++DN+ C QTL H +VT+L LFS ++D T+K+W
Sbjct: 533 STPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 592
Score = 87 (35.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 34/104 (32%), Positives = 47/104 (45%)
Query: 61 CVY--GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDG 118
CVY GD F S ++ +T + L GH V + + G KLYSGS D
Sbjct: 327 CVYSMGDLL-FSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI-QGC-KLYSGSADC 383
Query: 119 RVSVWDRDSGRCVNVITNGAEIGC-LISEGSWVFLGLPNAVKSW 161
+ VWD + + VN I C L+S + +F G A+K W
Sbjct: 384 TIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVW 427
Score = 83 (34.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 25/130 (19%), Positives = 57/130 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T + W++ L+C+ L+ +V S+ + ++ + + I +W + L+
Sbjct: 464 TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHV 523
Query: 297 GMLDAEA------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFFP 349
G + A A + +FS+ D ++R++ + + + + R + V + + G F
Sbjct: 524 GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNM-ICTQTLLRHQGSVTALAVSRGRLFS 582
Query: 350 GDASGSVGVW 359
G +V VW
Sbjct: 583 GAVDSTVKVW 592
Score = 54 (24.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
GH+ V + + S + L+SGS D + VWD
Sbjct: 318 GHQGPVWCLCVYSMGDLLFSGSSDKTIKVWD 348
>RGD|1559653 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=ISO] [GO:0000185 "activation of
MAPKKK activity" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043410 "positive regulation of MAPK
cascade" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 RGD:1559653 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 IPI:IPI00198753 ProteinModelPortal:D4A5P7
Ensembl:ENSRNOT00000004222 UCSC:RGD:1559653 ArrayExpress:D4A5P7
Uniprot:D4A5P7
Length = 629
Score = 110 (43.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 223 NSKEEAAVFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
++ ++ VF + R W++DN+ C QTL H +VT+L LFS ++D T+K+W
Sbjct: 568 STPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 627
Score = 87 (35.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 34/104 (32%), Positives = 47/104 (45%)
Query: 61 CVY--GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDG 118
CVY GD F S ++ +T + L GH V + + G KLYSGS D
Sbjct: 362 CVYSMGDLL-FSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI-QGC-KLYSGSADC 418
Query: 119 RVSVWDRDSGRCVNVITNGAEIGC-LISEGSWVFLGLPNAVKSW 161
+ VWD + + VN I C L+S + +F G A+K W
Sbjct: 419 TIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVW 462
Score = 83 (34.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/130 (19%), Positives = 57/130 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T + W++ L+C+ L+ +V S+ + ++ + + I +W + L+
Sbjct: 499 TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHV 558
Query: 297 GMLDAEA------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFFP 349
G + A A + +FS+ D ++R++ + + + + R + V + + G F
Sbjct: 559 GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNM-ICTQTLLRHQGSVTALAVSRGRLFS 617
Query: 350 GDASGSVGVW 359
G +V VW
Sbjct: 618 GAVDSTVKVW 627
Score = 54 (24.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
GH+ V + + S + L+SGS D + VWD
Sbjct: 353 GHQGPVWCLCVYSMGDLLFSGSSDKTIKVWD 383
>TAIR|locus:2127408 [details] [associations]
symbol:EMB2271 "AT4G21130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0006364
"rRNA processing" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GO:GO:0080008 HOGENOM:HOG000188732
KO:K14793 EMBL:AY874865 IPI:IPI00522353 RefSeq:NP_193845.2
UniGene:At.54451 ProteinModelPortal:Q3MKM6 SMR:Q3MKM6 STRING:Q3MKM6
EnsemblPlants:AT4G21130.1 GeneID:827861 KEGG:ath:AT4G21130
TAIR:At4g21130 InParanoid:Q3MKM6 OMA:DIRTREH PhylomeDB:Q3MKM6
ProtClustDB:CLSN2685798 Genevestigator:Q3MKM6 Uniprot:Q3MKM6
Length = 479
Score = 124 (48.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIWLYTHTKNNAELSSLFG- 297
W++ E VQ GH V+SL F + LFS S D T+ IW + ++ + S FG
Sbjct: 233 WDIRTREHVQAFTGHCGIVSSLCFREGTAELFSGSYDGTLSIW---NAEHRTYIESCFGH 289
Query: 298 -----MLDAEAKPVLFSSGKDSAIRLYELP-SFKLRARIFSRREVEVDQIGPAGLFFPGD 351
+DA + + S G+D ++LY++P S +L R S E + F G
Sbjct: 290 QSELLSIDALGRERVLSVGRDRTMQLYKVPESTRLIYRA-SESNFECCCFVNSDEFLSGS 348
Query: 352 ASGSVGVWKWL 362
+GS+ +W L
Sbjct: 349 DNGSIALWSIL 359
Score = 68 (29.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 95 HKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGR 129
H+ +VT V L ++ +S S+DG + WD SG+
Sbjct: 144 HQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGK 178
Score = 41 (19.5 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 15/62 (24%), Positives = 25/62 (40%)
Query: 12 EHKHSEGGETMMSDDDDLMKGRAEEREEMFGFGLAAMAIRVCNNWISDSCVYGDKCRFLH 71
+H+HS G +SDDD +G + ++ + W SD + +F
Sbjct: 143 KHQHSVTG-VALSDDDS--RGFSVSKDGTILHWDVSSGKSDEYKWPSDEVLKSHGLKFQE 199
Query: 72 SW 73
SW
Sbjct: 200 SW 201
Score = 39 (18.8 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 95 HKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
H K + + S L +G D V +WD
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWD 234
>UNIPROTKB|Q5EA56 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 GO:GO:0000185 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:DAAA02057310 EMBL:DAAA02057311 EMBL:BT020713
IPI:IPI00696466 RefSeq:NP_001019692.1 UniGene:Bt.2084 STRING:Q5EA56
Ensembl:ENSBTAT00000025393 GeneID:511692 KEGG:bta:511692
InParanoid:Q5EA56 NextBio:20870056 Uniprot:Q5EA56
Length = 669
Score = 110 (43.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 223 NSKEEAAVFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
++ ++ VF + R W++DN+ C QTL H +VT+L LFS ++D T+K+W
Sbjct: 608 STPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 667
Score = 87 (35.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/104 (32%), Positives = 47/104 (45%)
Query: 61 CVY--GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDG 118
CVY GD F S ++ +T + L GH V + + G KLYSGS D
Sbjct: 402 CVYSMGDLL-FSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI-QGC-KLYSGSADC 458
Query: 119 RVSVWDRDSGRCVNVITNGAEIGC-LISEGSWVFLGLPNAVKSW 161
+ VWD + + VN I C L+S + +F G A+K W
Sbjct: 459 TIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVW 502
Score = 83 (34.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/130 (19%), Positives = 57/130 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T + W++ L+C+ L+ +V S+ + ++ + + I +W + L+
Sbjct: 539 TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHV 598
Query: 297 GMLDAEA------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFFP 349
G + A A + +FS+ D ++R++ + + + + R + V + + G F
Sbjct: 599 GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNM-ICTQTLLRHQGSVTALAVSRGRLFS 657
Query: 350 GDASGSVGVW 359
G +V VW
Sbjct: 658 GAVDSTVKVW 667
Score = 54 (24.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
GH+ V + + S + L+SGS D + VWD
Sbjct: 393 GHQGPVWCLCVYSMGDLLFSGSSDKTIKVWD 423
>UNIPROTKB|E2QXW8 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849
GO:GO:0000185 CTD:84231 KO:K10646 OMA:ALCIQGN EMBL:AAEX03004625
RefSeq:XP_852015.1 ProteinModelPortal:E2QXW8
Ensembl:ENSCAFT00000030876 GeneID:609824 KEGG:cfa:609824
NextBio:20895405 Uniprot:E2QXW8
Length = 670
Score = 110 (43.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 223 NSKEEAAVFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
++ ++ VF + R W++DN+ C QTL H +VT+L LFS ++D T+K+W
Sbjct: 609 STPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 87 (35.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/104 (32%), Positives = 47/104 (45%)
Query: 61 CVY--GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDG 118
CVY GD F S ++ +T + L GH V + + G KLYSGS D
Sbjct: 403 CVYSMGDLL-FSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI-QGC-KLYSGSADC 459
Query: 119 RVSVWDRDSGRCVNVITNGAEIGC-LISEGSWVFLGLPNAVKSW 161
+ VWD + + VN I C L+S + +F G A+K W
Sbjct: 460 TIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVW 503
Score = 83 (34.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/130 (19%), Positives = 57/130 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T + W++ L+C+ L+ +V S+ + ++ + + I +W + L+
Sbjct: 540 TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHV 599
Query: 297 GMLDAEA------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFFP 349
G + A A + +FS+ D ++R++ + + + + R + V + + G F
Sbjct: 600 GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNM-ICTQTLLRHQGSVTALAVSRGRLFS 658
Query: 350 GDASGSVGVW 359
G +V VW
Sbjct: 659 GAVDSTVKVW 668
Score = 54 (24.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
GH+ V + + S + L+SGS D + VWD
Sbjct: 394 GHQGPVWCLCVYSMGDLLFSGSSDKTIKVWD 424
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 153 (58.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 48/209 (22%), Positives = 89/209 (42%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG--RCVNVIT-NGAEIGCLIS 145
L +NGH+K++ ++ SN +++ S D + V SG +C+ + + E+ C+++
Sbjct: 905 LYTVNGHRKSIESIAC--NSNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVA 962
Query: 146 EGSWVF-LGLPNAVKSW------RXXXXXXXXXXXXXXXXXXGS---EGG---VISVWKG 192
++F +K W G GG +I VW
Sbjct: 963 NEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRYLFSGGNDQIIYVWDT 1022
Query: 193 TFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTL 252
++ F W SL + +++ ++ + + W+L N C+ TL
Sbjct: 1023 ETLSMLFNMQGHED---WVLSLHCTASYLFSTSKDNVI--------KIWDLSNFSCIDTL 1071
Query: 253 KGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
KGH ++V+S + D YL+S S D +IK+W
Sbjct: 1072 KGHWNSVSSCVVKDRYLYSGSEDNSIKVW 1100
>UNIPROTKB|I3LMJ3 [details] [associations]
symbol:LOC100738291 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50145 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 EMBL:FP102909
Ensembl:ENSSSCT00000027206 Uniprot:I3LMJ3
Length = 512
Score = 110 (43.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 223 NSKEEAAVFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
++ ++ VF + R W++DN+ C QTL H +VT+L LFS ++D T+K+W
Sbjct: 451 STPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 510
Score = 83 (34.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 33/104 (31%), Positives = 47/104 (45%)
Query: 61 CVY--GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDG 118
CVY GD F S ++ +T + L GH V + + G +LYSGS D
Sbjct: 245 CVYSVGDLL-FSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI-QGC-RLYSGSADC 301
Query: 119 RVSVWDRDSGRCVNVITNGAEIGC-LISEGSWVFLGLPNAVKSW 161
+ VWD + + VN I C L+S + +F G A+K W
Sbjct: 302 TIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLLFSGSLKAIKVW 345
Score = 83 (34.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/130 (19%), Positives = 57/130 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T + W++ L+C+ L+ +V S+ + ++ + + I +W + L+
Sbjct: 382 TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHV 441
Query: 297 GMLDAEA------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFFP 349
G + A A + +FS+ D ++R++ + + + + R + V + + G F
Sbjct: 442 GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNM-ICTQTLLRHQGSVTALAVSRGRLFS 500
Query: 350 GDASGSVGVW 359
G +V VW
Sbjct: 501 GAVDSTVKVW 510
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
GH+ V + + S + L+SGS D + VWD
Sbjct: 236 GHQGPVWCLCVYSVGDLLFSGSSDKTIKVWD 266
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 53/214 (24%), Positives = 82/214 (38%)
Query: 83 TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGC 142
TN+ + M +GHK VT VG +Y+GS DG V +WD + C A +
Sbjct: 63 TNNNSPAMSFDGHKGNVTGVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRDYECSAPVNT 122
Query: 143 LISEGSWVFL--GLPN-AVKSWRXXXXXXXXXXX-----XXXXXXXGSEGGVI--SVWKG 192
++ + L G N +++ W S+GG++ S KG
Sbjct: 123 VVLHPNQAELISGDQNGSIRVWDLISNTCSRELVPDGEVGITSLTISSDGGLVVASNTKG 182
Query: 193 T-FVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCG--HTTRTWNLDNLECV 249
FV + S PL ++ + + + C HT + WN V
Sbjct: 183 KCFVWRLGEDDTSRFEPLQKIEAHNAPILKTLFSPDTKLLATCSADHTVKIWNTKKFNVV 242
Query: 250 QTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
QTL GH V F ++ YL + S D ++W
Sbjct: 243 QTLNGHQRWVWDCAFSNDSAYLVTGSSDHLSRLW 276
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 103 (41.3 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 24/89 (26%), Positives = 49/89 (55%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-LYTHTKNNAELS- 293
+ + W+ + EC+ TL+GH++ V SL F ++ S SLD +I++W + T + +
Sbjct: 1135 YMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGH 1194
Query: 294 -SLFGMLDAEAKPVLFSSGKDSAIRLYEL 321
SL ++ +L S DS ++++++
Sbjct: 1195 QSLTSGMELRQN-ILVSGNADSTVKVWDI 1222
Score = 99 (39.9 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 84 NSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNG-AEIGC 142
+S A + L GH V + L GS K+ SGSRD + VWD + G C++V+ A + C
Sbjct: 1063 DSGACVHTLQGHTSTVRCMHL-HGS-KVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRC 1120
Query: 143 LISEGSWVFLGLPN-AVKSW 161
+ +G + G + VK W
Sbjct: 1121 VQYDGKLIVSGAYDYMVKIW 1140
Score = 94 (38.1 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 53 CNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLY 112
C + + V G L W +V+G L TL+ GH V + + SG N +
Sbjct: 1000 CLQFSGNRIVSGSDDNTLKVW-SAVNG----KCLRTLV---GHTGGVWSSQM-SG-NIII 1049
Query: 113 SGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
SGS D + VWD DSG CV+ + + + + C+ GS V G +A ++ W
Sbjct: 1050 SGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVW 1100
Score = 92 (37.4 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 237 TTRTWNLDNLECVQTLKG---HSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W++ +C+QTL G H VT L F ++ +SS D T+K+W
Sbjct: 1216 TVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLW 1263
Score = 89 (36.4 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 28/129 (21%), Positives = 56/129 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T R W+++ C+ L GH V + + + + S + D +KIW H + L +L
Sbjct: 1096 TLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIW---HPERQECLHTLQ 1152
Query: 297 G------MLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLFFPG 350
G L + V+ S D++IR++++ + + + + + + G
Sbjct: 1153 GHTNRVYSLQFDGLHVV-SGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSG 1211
Query: 351 DASGSVGVW 359
+A +V VW
Sbjct: 1212 NADSTVKVW 1220
Score = 43 (20.2 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 8 DDDDEHKHSEGGETMMSDDDD 28
DDD+E + E E + +D+D
Sbjct: 168 DDDEEPEPEEDDEEELIEDED 188
>UNIPROTKB|Q6Q0C0 [details] [associations]
symbol:TRAF7 "E3 ubiquitin-protein ligase TRAF7"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=NAS] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0000185 "activation of MAPKKK activity"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0006915 "apoptotic process" evidence=IDA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0006355 GO:GO:0042981 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016023 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0000185 EMBL:AY569455
EMBL:AL136921 IPI:IPI00395631 IPI:IPI00470778 RefSeq:NP_115647.2
UniGene:Hs.713632 ProteinModelPortal:Q6Q0C0 SMR:Q6Q0C0
IntAct:Q6Q0C0 MINT:MINT-1161375 STRING:Q6Q0C0 PhosphoSite:Q6Q0C0
DMDM:54036486 PaxDb:Q6Q0C0 PRIDE:Q6Q0C0 Ensembl:ENST00000326181
GeneID:84231 KEGG:hsa:84231 UCSC:uc002cow.3 CTD:84231
GeneCards:GC16P002205 HGNC:HGNC:20456 HPA:HPA041229 MIM:606692
neXtProt:NX_Q6Q0C0 PharmGKB:PA134917323 HOGENOM:HOG000220840
HOVERGEN:HBG055270 InParanoid:Q6Q0C0 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 PhylomeDB:Q6Q0C0 ChiTaRS:TRAF7 GenomeRNAi:84231
NextBio:73692 ArrayExpress:Q6Q0C0 Bgee:Q6Q0C0 CleanEx:HS_TRAF7
Genevestigator:Q6Q0C0 GermOnline:ENSG00000131653 Uniprot:Q6Q0C0
Length = 670
Score = 110 (43.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 223 NSKEEAAVFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
++ ++ VF + R W++DN+ C QTL H +VT+L LFS ++D T+K+W
Sbjct: 609 STPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 85 (35.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 34/104 (32%), Positives = 47/104 (45%)
Query: 61 CVY--GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDG 118
CVY GD F S ++ +T + L GH V + + G KLYSGS D
Sbjct: 403 CVYSMGDLL-FSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI-QGC-KLYSGSADC 459
Query: 119 RVSVWDRDSGRCVNVITNGAEIGC-LISEGSWVFLGLPNAVKSW 161
+ VWD + + VN I C L+S + +F G A+K W
Sbjct: 460 TIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNVLFSGSLKAIKVW 503
Score = 83 (34.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 25/130 (19%), Positives = 57/130 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T + W++ L+C+ L+ +V S+ + ++ + + I +W + L+
Sbjct: 540 TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHV 599
Query: 297 GMLDAEA------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFFP 349
G + A A + +FS+ D ++R++ + + + + R + V + + G F
Sbjct: 600 GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNM-ICTQTLLRHQGSVTALAVSRGRLFS 658
Query: 350 GDASGSVGVW 359
G +V VW
Sbjct: 659 GAVDSTVKVW 668
Score = 54 (24.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
GH+ V + + S + L+SGS D + VWD
Sbjct: 394 GHQGPVWCLCVYSMGDLLFSGSSDKTIKVWD 424
>UNIPROTKB|F1P0J6 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 EMBL:AADN02023658
EMBL:AADN02023655 EMBL:AADN02023656 EMBL:AADN02023657
IPI:IPI00822582 Ensembl:ENSGALT00000040411 ArrayExpress:F1P0J6
Uniprot:F1P0J6
Length = 660
Score = 99 (39.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 223 NSKEEAAVFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKI 280
++ ++ VF + R W++DN+ C QTL H +VT+L LFS ++D T+K+
Sbjct: 599 STPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKV 657
Score = 96 (38.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 35/104 (33%), Positives = 47/104 (45%)
Query: 61 CVY--GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDG 118
CVY GD F S ++ +T + L GH V + L NKLYSGS D
Sbjct: 393 CVYSIGDLL-FSGSSDKTIKVWDTCTTYKCQKTLEGHDGIV--LALCIQGNKLYSGSADC 449
Query: 119 RVSVWDRDSGRCVNVITNGAEIGC-LISEGSWVFLGLPNAVKSW 161
+ VWD + + VN I C L+S + +F G A+K W
Sbjct: 450 TIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVW 493
Score = 82 (33.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 29/130 (22%), Positives = 58/130 (44%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAE-LSSL 295
T + W++ NLECV L+ +V S+ + ++ + + I +W TK L+
Sbjct: 530 TIKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVW-DIETKEQVRTLTGH 588
Query: 296 FGMLDAEA------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFF 348
G + A A + +FS+ D ++R++ + + + + R + V + + G F
Sbjct: 589 VGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNM-ICTQTLLRHQGSVTALAVSRGRLF 647
Query: 349 PGDASGSVGV 358
G +V V
Sbjct: 648 SGAVDSTVKV 657
Score = 64 (27.6 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 104 LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI-TNGAEIGCLISEGSWVFLGL-PNAVKSW 161
L + N LYSGS + +WD + CV+V+ T+G + + + G N + W
Sbjct: 516 LVASQNYLYSGSYQ-TIKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVW 574
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 100 (40.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 156 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 202
Score = 78 (32.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 17 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 64
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 100 (40.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 159 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 205
Score = 78 (32.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 20 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 67
>UNIPROTKB|F1RFA9 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231 KO:K10646
OMA:ALCIQGN EMBL:FP102350 RefSeq:XP_003124781.1 UniGene:Ssc.21218
Ensembl:ENSSSCT00000008814 GeneID:100516964 KEGG:ssc:100516964
Uniprot:F1RFA9
Length = 670
Score = 110 (43.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 223 NSKEEAAVFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
++ ++ VF + R W++DN+ C QTL H +VT+L LFS ++D T+K+W
Sbjct: 609 STPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 83 (34.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 33/104 (31%), Positives = 47/104 (45%)
Query: 61 CVY--GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDG 118
CVY GD F S ++ +T + L GH V + + G +LYSGS D
Sbjct: 403 CVYSVGDLL-FSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCI-QGC-RLYSGSADC 459
Query: 119 RVSVWDRDSGRCVNVITNGAEIGC-LISEGSWVFLGLPNAVKSW 161
+ VWD + + VN I C L+S + +F G A+K W
Sbjct: 460 TIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLLFSGSLKAIKVW 503
Score = 83 (34.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 25/130 (19%), Positives = 57/130 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T + W++ L+C+ L+ +V S+ + ++ + + I +W + L+
Sbjct: 540 TIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHV 599
Query: 297 GMLDAEA------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFFP 349
G + A A + +FS+ D ++R++ + + + + R + V + + G F
Sbjct: 600 GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNM-ICTQTLLRHQGSVTALAVSRGRLFS 658
Query: 350 GDASGSVGVW 359
G +V VW
Sbjct: 659 GAVDSTVKVW 668
Score = 54 (24.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
GH+ V + + S + L+SGS D + VWD
Sbjct: 394 GHQGPVWCLCVYSVGDLLFSGSSDKTIKVWD 424
>DICTYBASE|DDB_G0282489 [details] [associations]
symbol:mhkD "putative myosin heavy chain kinase D"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;ISS] [GO:0006468 "protein
phosphorylation" evidence=IEA;ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA;ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR004166 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320 SMART:SM00811
dictyBase:DDB_G0282489 GO:GO:0005524 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000047 GenomeReviews:CM000152_GR SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:Q923J1
GO:GO:0031037 ProtClustDB:CLSZ2429540 GO:GO:0016905
RefSeq:XP_640080.1 ProteinModelPortal:Q54SF9
EnsemblProtists:DDB0220109 GeneID:8623609 KEGG:ddi:DDB_G0282489
OMA:FRAHRRS Uniprot:Q54SF9
Length = 941
Score = 152 (58.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 63/265 (23%), Positives = 109/265 (41%)
Query: 81 NTTNS-LATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
N NS L +++ L+GH + V ++ + KLYS S DG V +W+ +TN +
Sbjct: 621 NPLNSELTSIVHLSGHDERVCSLLINQDKTKLYSASADGYVKIWN---------LTNNED 671
Query: 140 IGCLISEGSWVFLGLPNAVKSWRXXXXXXXXXXXXXXXXXXGSEGGVISVWK---GTFVA 196
+ + + S+R S G I +W T
Sbjct: 672 LSKI------------QMIDSFRAHRRSIEKMLLNEKYLFTASSDGTIKIWSLPTTTTTT 719
Query: 197 NPFKQVASIRAPLWFC------SLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQ 250
KQ +S + + C + ND + + V + ++L +C++
Sbjct: 720 TTSKQSSSSSSSSYECIGKLEDHTAEVNDMCIDIENNFLVSCSFDKQIKIYDLSTFKCIK 779
Query: 251 TLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSS-LFGMLDAEAKPV--- 306
+L H ++ S+ +YLFSSS D++IKIW + E+ ++GM DA P+
Sbjct: 780 SLNAHGKSIKSIYMSGKYLFSSSNDQSIKIW-------DLEMCMCVYGMNDAHDAPITSL 832
Query: 307 ------LFSSGKDSAIRLYELPSFK 325
LFS+ KD I+ + L +F+
Sbjct: 833 RMFGNRLFSASKDGEIKDWNLSTFQ 857
Score = 40 (19.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 66 KCRFLHSWVHSVDGDNTTN 84
K FL +WV + G TTN
Sbjct: 454 KIEFLSAWVIEIQG--TTN 470
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 111 (44.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 29/81 (35%), Positives = 42/81 (51%)
Query: 87 ATLMKLNGHKKAVTNVG-LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCL-I 144
A + L+GH +V++V L S N L S SRDG + +WD +G CV VI + E +
Sbjct: 192 ANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDV 251
Query: 145 S---EGSWVFLG-LPNAVKSW 161
S +G W+ G A+ W
Sbjct: 252 SPSFDGKWLVSGGRDQAITVW 272
Score = 76 (31.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W ++TL GH + V L+F +YLFS S D+TI+ W
Sbjct: 331 TIKLWEARG-RLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCW 376
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 111 (44.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 29/81 (35%), Positives = 42/81 (51%)
Query: 87 ATLMKLNGHKKAVTNVG-LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCL-I 144
A + L+GH +V++V L S N L S SRDG + +WD +G CV VI + E +
Sbjct: 192 ANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDV 251
Query: 145 S---EGSWVFLG-LPNAVKSW 161
S +G W+ G A+ W
Sbjct: 252 SPSFDGKWLVSGGRDQAITVW 272
Score = 76 (31.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W ++TL GH + V L+F +YLFS S D+TI+ W
Sbjct: 331 TIKLWEARG-RLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCW 376
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 100 (40.3 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-LYT----HTKNNAELS 293
+ W+ + C+ TL+GH++ V SL F ++ S SLD +I++W + T HT + S
Sbjct: 529 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-S 587
Query: 294 SLFGMLDAEAKP-VLFSSGKDSAIRLYEL 321
GM E K +L S DS ++++++
Sbjct: 588 LTSGM---ELKDNILVSGNADSTVKIWDI 613
Score = 93 (37.8 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 237 TTRTWNLDNLECVQTLKG---HSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W++ +C+QTL+G H VT L F ++ +SS D T+K+W
Sbjct: 607 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 654
Score = 93 (37.8 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 31/125 (24%), Positives = 55/125 (44%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGM 298
R W+++ C+ TL GH + + D L S + D T+KIW K L +L G
Sbjct: 569 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW---DIKTGQCLQTLQGP 625
Query: 299 LDAEA--------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLFFPG 350
++ K + +S D ++L++L + + F R V ++ G G+ +
Sbjct: 626 NKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE-----FIRNLVTLESGGSGGVVWRI 680
Query: 351 DASGS 355
AS +
Sbjct: 681 RASNT 685
Score = 89 (36.4 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNG-AEIGCLISEGSWV 150
L GH V + L ++ SGSRD + VWD ++G+C++V+ A + C+ +G V
Sbjct: 462 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV 519
Query: 151 FLGLPN-AVKSW 161
G + VK W
Sbjct: 520 VSGAYDFMVKVW 531
Score = 75 (31.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLISE 146
L L GH V ++ G + + SGS D + VWD ++G C++ +T + G + +
Sbjct: 539 LHTLQGHTNRVYSLQF-DGIH-VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 596
Query: 147 GSWVFLGLPNAVKSW 161
V + VK W
Sbjct: 597 NILVSGNADSTVKIW 611
Score = 65 (27.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 68 RFLHSWVHSVDGDNTTN--SLAT---LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSV 122
+F + + S DNT S T L L GH V + + N + SGS D + V
Sbjct: 393 QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--NIIISGSTDRTLKV 450
Query: 123 WDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
W+ ++G C++ + + + + C+ V G +A ++ W
Sbjct: 451 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 491
Score = 42 (19.8 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 9 DDDEHKH-SEGGETMMSDDDDLMKGRAEEREE 39
+D + H E +S D+D G EE+EE
Sbjct: 75 NDSQQGHLEENNNRFISVDED-SSGNQEEQEE 105
Score = 42 (19.8 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 10 DDEH--KHSE--GGETMMSDDDDLMKGRAEEREEMF 41
++EH ++ E G E D +D +G EE F
Sbjct: 54 EEEHTARNGEVVGAEPRPGDQNDSQQGHLEENNNRF 89
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 100 (40.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-LYT----HTKNNAELS 293
+ W+ + C+ TL+GH++ V SL F ++ S SLD +I++W + T HT + S
Sbjct: 404 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-S 462
Query: 294 SLFGMLDAEAKP-VLFSSGKDSAIRLYEL 321
GM E K +L S DS ++++++
Sbjct: 463 LTSGM---ELKDNILVSGNADSTVKIWDI 488
Score = 93 (37.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 237 TTRTWNLDNLECVQTLKG---HSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W++ +C+QTL+G H VT L F ++ +SS D T+K+W
Sbjct: 482 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 529
Score = 93 (37.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 31/125 (24%), Positives = 55/125 (44%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGM 298
R W+++ C+ TL GH + + D L S + D T+KIW K L +L G
Sbjct: 444 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW---DIKTGQCLQTLQGP 500
Query: 299 LDAEA--------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLFFPG 350
++ K + +S D ++L++L + + F R V ++ G G+ +
Sbjct: 501 NKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE-----FIRNLVTLESGGSGGVVWRI 555
Query: 351 DASGS 355
AS +
Sbjct: 556 RASNT 560
Score = 89 (36.4 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNG-AEIGCLISEGSWV 150
L GH V + L ++ SGSRD + VWD ++G+C++V+ A + C+ +G V
Sbjct: 337 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV 394
Query: 151 FLGLPN-AVKSW 161
G + VK W
Sbjct: 395 VSGAYDFMVKVW 406
Score = 75 (31.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLISE 146
L L GH V ++ G + + SGS D + VWD ++G C++ +T + G + +
Sbjct: 414 LHTLQGHTNRVYSLQF-DGIH-VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 471
Query: 147 GSWVFLGLPNAVKSW 161
V + VK W
Sbjct: 472 NILVSGNADSTVKIW 486
Score = 65 (27.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 68 RFLHSWVHSVDGDNTTN--SLAT---LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSV 122
+F + + S DNT S T L L GH V + + N + SGS D + V
Sbjct: 268 QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--NIIISGSTDRTLKV 325
Query: 123 WDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
W+ ++G C++ + + + + C+ V G +A ++ W
Sbjct: 326 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 366
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 100 (40.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-LYT----HTKNNAELS 293
+ W+ + C+ TL+GH++ V SL F ++ S SLD +I++W + T HT + S
Sbjct: 446 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-S 504
Query: 294 SLFGMLDAEAKP-VLFSSGKDSAIRLYEL 321
GM E K +L S DS ++++++
Sbjct: 505 LTSGM---ELKDNILVSGNADSTVKIWDI 530
Score = 93 (37.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 237 TTRTWNLDNLECVQTLKG---HSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W++ +C+QTL+G H VT L F ++ +SS D T+K+W
Sbjct: 524 TVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 89 (36.4 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNG-AEIGCLISEGSWV 150
L GH V + L ++ SGSRD + VWD ++G+C++V+ A + C+ +G V
Sbjct: 379 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV 436
Query: 151 FLGLPN-AVKSW 161
G + VK W
Sbjct: 437 VSGAYDFMVKVW 448
Score = 75 (31.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLISE 146
L L GH V ++ G + + SGS D + VWD ++G C++ +T + G + +
Sbjct: 456 LHTLQGHTNRVYSLQF-DGIH-VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 513
Query: 147 GSWVFLGLPNAVKSW 161
V + VK W
Sbjct: 514 NILVSGNADSTVKIW 528
Score = 65 (27.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 68 RFLHSWVHSVDGDNTTN--SLAT---LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSV 122
+F + + S DNT S T L L GH V + + N + SGS D + V
Sbjct: 310 QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--NIIISGSTDRTLKV 367
Query: 123 WDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
W+ ++G C++ + + + + C+ V G +A ++ W
Sbjct: 368 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 408
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 100 (40.3 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-LYT----HTKNNAELS 293
+ W+ + C+ TL+GH++ V SL F ++ S SLD +I++W + T HT + S
Sbjct: 524 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-S 582
Query: 294 SLFGMLDAEAKP-VLFSSGKDSAIRLYEL 321
GM E K +L S DS ++++++
Sbjct: 583 LTSGM---ELKDNILVSGNADSTVKIWDI 608
Score = 93 (37.8 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 237 TTRTWNLDNLECVQTLKG---HSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W++ +C+QTL+G H VT L F ++ +SS D T+K+W
Sbjct: 602 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 649
Score = 93 (37.8 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 31/125 (24%), Positives = 55/125 (44%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGM 298
R W+++ C+ TL GH + + D L S + D T+KIW K L +L G
Sbjct: 564 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW---DIKTGQCLQTLQGP 620
Query: 299 LDAEA--------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLFFPG 350
++ K + +S D ++L++L + + F R V ++ G G+ +
Sbjct: 621 NKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE-----FIRNLVTLESGGSGGVVWRI 675
Query: 351 DASGS 355
AS +
Sbjct: 676 RASNT 680
Score = 89 (36.4 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNG-AEIGCLISEGSWV 150
L GH V + L ++ SGSRD + VWD ++G+C++V+ A + C+ +G V
Sbjct: 457 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV 514
Query: 151 FLGLPN-AVKSW 161
G + VK W
Sbjct: 515 VSGAYDFMVKVW 526
Score = 75 (31.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLISE 146
L L GH V ++ G + + SGS D + VWD ++G C++ +T + G + +
Sbjct: 534 LHTLQGHTNRVYSLQF-DGIH-VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 591
Query: 147 GSWVFLGLPNAVKSW 161
V + VK W
Sbjct: 592 NILVSGNADSTVKIW 606
Score = 65 (27.9 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 68 RFLHSWVHSVDGDNTTN--SLAT---LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSV 122
+F + + S DNT S T L L GH V + + N + SGS D + V
Sbjct: 388 QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--NIIISGSTDRTLKV 445
Query: 123 WDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
W+ ++G C++ + + + + C+ V G +A ++ W
Sbjct: 446 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 486
Score = 41 (19.5 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 8 DDDDEHKHSEGGETMMSDDDDLMKGRAEEREE 39
+D + + E +S D+D G EE+EE
Sbjct: 70 NDSQQGQLEENNNRFISVDED-SSGNQEEQEE 100
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 100 (40.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-LYT----HTKNNAELS 293
+ W+ + C+ TL+GH++ V SL F ++ S SLD +I++W + T HT + S
Sbjct: 444 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-S 502
Query: 294 SLFGMLDAEAKP-VLFSSGKDSAIRLYEL 321
GM E K +L S DS ++++++
Sbjct: 503 LTSGM---ELKDNILVSGNADSTVKIWDI 528
Score = 93 (37.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 237 TTRTWNLDNLECVQTLKG---HSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W++ +C+QTL+G H VT L F ++ +SS D T+K+W
Sbjct: 522 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 569
Score = 93 (37.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 31/125 (24%), Positives = 55/125 (44%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGM 298
R W+++ C+ TL GH + + D L S + D T+KIW K L +L G
Sbjct: 484 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW---DIKTGQCLQTLQGP 540
Query: 299 LDAEA--------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLFFPG 350
++ K + +S D ++L++L + + F R V ++ G G+ +
Sbjct: 541 NKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE-----FIRNLVTLESGGSGGVVWRI 595
Query: 351 DASGS 355
AS +
Sbjct: 596 RASNT 600
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNG-AEIGCLISEGSWV 150
L GH V + L ++ SGSRD + VWD ++G+C++V+ A + C+ +G V
Sbjct: 377 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV 434
Query: 151 FLGLPN-AVKSW 161
G + VK W
Sbjct: 435 VSGAYDFMVKVW 446
Score = 75 (31.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLISE 146
L L GH V ++ G + + SGS D + VWD ++G C++ +T + G + +
Sbjct: 454 LHTLQGHTNRVYSLQF-DGIH-VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 511
Query: 147 GSWVFLGLPNAVKSW 161
V + VK W
Sbjct: 512 NILVSGNADSTVKIW 526
Score = 65 (27.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 68 RFLHSWVHSVDGDNTTN--SLAT---LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSV 122
+F + + S DNT S T L L GH V + + N + SGS D + V
Sbjct: 308 QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--NIIISGSTDRTLKV 365
Query: 123 WDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
W+ ++G C++ + + + + C+ V G +A ++ W
Sbjct: 366 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 406
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 100 (40.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-LYT----HTKNNAELS 293
+ W+ + C+ TL+GH++ V SL F ++ S SLD +I++W + T HT + S
Sbjct: 446 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-S 504
Query: 294 SLFGMLDAEAKP-VLFSSGKDSAIRLYEL 321
GM E K +L S DS ++++++
Sbjct: 505 LTSGM---ELKDNILVSGNADSTVKIWDI 530
Score = 94 (38.1 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 31/125 (24%), Positives = 55/125 (44%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGM 298
R W+++ C+ TL GH + + D L S + D T+KIW K L +L G
Sbjct: 486 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW---DIKTGQCLQTLQGP 542
Query: 299 LDAEA--------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLFFPG 350
++ K + +S D ++L++L + + F R V ++ G G+ +
Sbjct: 543 SKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE-----FIRNLVTLESGGSGGVVWRI 597
Query: 351 DASGS 355
AS +
Sbjct: 598 RASNT 602
Score = 93 (37.8 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 237 TTRTWNLDNLECVQTLKG---HSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W++ +C+QTL+G H VT L F ++ +SS D T+K+W
Sbjct: 524 TVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNG-AEIGCLISEGSWV 150
L GH V + L ++ SGSRD + VWD ++G+C++V+ A + C+ +G V
Sbjct: 379 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRV 436
Query: 151 FLGLPN-AVKSW 161
G + VK W
Sbjct: 437 VSGAYDFMVKVW 448
Score = 75 (31.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLISE 146
L L GH V ++ G + + SGS D + VWD ++G C++ +T + G + +
Sbjct: 456 LHTLQGHTNRVYSLQF-DGIH-VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 513
Query: 147 GSWVFLGLPNAVKSW 161
V + VK W
Sbjct: 514 NILVSGNADSTVKIW 528
Score = 65 (27.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 68 RFLHSWVHSVDGDNTTN--SLAT---LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSV 122
+F + + S DNT S T L L GH V + + N + SGS D + V
Sbjct: 310 QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--NIIISGSTDRTLKV 367
Query: 123 WDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
W+ ++G C++ + + + + C+ V G +A ++ W
Sbjct: 368 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 408
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 102 (41.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 34/132 (25%), Positives = 59/132 (44%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFW--DEY--LFSSSLDETIKIWLYTHTKNNAEL 292
T + WN EC+ TL GH+D V+++ D+ + S+S D+T+K W NA+
Sbjct: 131 TVKVWNTIG-ECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADF 189
Query: 293 SSLFGMLDA-EAKP---VLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLFF 348
G + P + S+GKD I L++L K + ++ EV P +
Sbjct: 190 IGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHALAFSPNRYWL 249
Query: 349 PGDASGSVGVWK 360
+ + ++K
Sbjct: 250 AAATTSGIKIFK 261
Score = 78 (32.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/114 (25%), Positives = 50/114 (43%)
Query: 24 SDDDDLMKGRAEEREEMFGFGLAAMAIRVCNNWISDSCVYGDKCRFLH-SWVHSVD-GDN 81
S D L+K + E+ +G+ + + ++ + D + D L SW ++ D
Sbjct: 37 SRDKTLIKWKLTGGEDN-QYGIPKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDL 95
Query: 82 TTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT 135
T T + GHK V +V + ++ S SRD V VW+ G C+ +T
Sbjct: 96 ETGE--TTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNT-IGECMATLT 146
Score = 53 (23.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 92 LNGHKKAVTNVGL-PSGSNKLYSGSRDGRVSVWDRDSG 128
L GH VT++ P+ + L SGSRD + W G
Sbjct: 13 LEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGG 50
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 102 (41.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 34/132 (25%), Positives = 59/132 (44%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFW--DEY--LFSSSLDETIKIWLYTHTKNNAEL 292
T + WN EC+ TL GH+D V+++ D+ + S+S D+T+K W NA+
Sbjct: 131 TVKVWNTIG-ECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADF 189
Query: 293 SSLFGMLDA-EAKP---VLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLFF 348
G + P + S+GKD I L++L K + ++ EV P +
Sbjct: 190 IGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHALAFSPNRYWL 249
Query: 349 PGDASGSVGVWK 360
+ + ++K
Sbjct: 250 AAATTSGIKIFK 261
Score = 78 (32.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/114 (25%), Positives = 50/114 (43%)
Query: 24 SDDDDLMKGRAEEREEMFGFGLAAMAIRVCNNWISDSCVYGDKCRFLH-SWVHSVD-GDN 81
S D L+K + E+ +G+ + + ++ + D + D L SW ++ D
Sbjct: 37 SRDKTLIKWKLTGGEDN-QYGIPKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDL 95
Query: 82 TTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT 135
T T + GHK V +V + ++ S SRD V VW+ G C+ +T
Sbjct: 96 ETGE--TTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNT-IGECMATLT 146
Score = 53 (23.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 92 LNGHKKAVTNVGL-PSGSNKLYSGSRDGRVSVWDRDSG 128
L GH VT++ P+ + L SGSRD + W G
Sbjct: 13 LEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGG 50
>UNIPROTKB|G4MZP1 [details] [associations]
symbol:MGG_07030 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K14793 RefSeq:XP_003715212.1 ProteinModelPortal:G4MZP1
EnsemblFungi:MGG_07030T0 GeneID:2683044 KEGG:mgr:MGG_07030
Uniprot:G4MZP1
Length = 609
Score = 98 (39.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 73 WVHSVDGD-----NTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDS 127
WV + D + +L + L H+ AVT++ G+N+LYSGSRD V VW+ D+
Sbjct: 260 WVVTAGADKRIVVHDAQTLKPVRALTHHRDAVTSLAFQRGTNQLYSGSRDRTVKVWNIDN 319
Score = 87 (35.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSL--LFWDEYLFSSSLDETIKIW 281
T + WN+DNL ++TL GH D V + L + + + + D T ++W
Sbjct: 311 TVKVWNIDNLAYIETLFGHQDHVVDIDALAQERCVSAGARDRTARLW 357
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 100 (40.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 296 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 95 (38.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+TIK+W
Sbjct: 108 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 154
Score = 78 (32.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 123 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 170
Score = 65 (27.9 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 75
Score = 59 (25.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCL 266
Score = 56 (24.8 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GH +V ++ L S S D + +WD C+ +
Sbjct: 81 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 123
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 101 (40.6 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 95 (38.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+TIK+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 78 (32.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 65 (27.9 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Score = 59 (25.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 311 LLSGSRDKTIKMWDISTGMCL 331
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 89 (36.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 23/110 (20%), Positives = 53/110 (48%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWD---EYLFSSSLDETIKIWLY-------THTKN 288
R W+ + +C++TL + S + + +Y+ +++LD T+K+W Y T+T +
Sbjct: 190 RIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGH 249
Query: 289 NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEV 338
E LF + + S +D+ + ++ L + ++ R+ +V +
Sbjct: 250 KNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVI 299
Score = 88 (36.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 12 EHKHSEGGETMMSD---DDDLMKGRAEEREEMFGFGLAAMAIRVCNN--WISDSCVYGDK 66
EH +E ++++S +++ K R + G A +++ N W++ S D
Sbjct: 4 EHLPAERAQSLLSAPRREEEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAA--DA 61
Query: 67 CRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRD 126
+ W + DG N TL GH +++V S S++L S S D + VWD
Sbjct: 62 LIII--W-GAYDG----NCKKTLY---GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMR 111
Query: 127 SGRCVNVI 134
SG+C+ +
Sbjct: 112 SGKCLKTL 119
Score = 79 (32.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSL--DETIKIW 281
WNL E VQ L+GH+D V S + S++L D+TIK+W
Sbjct: 280 WNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 79 (32.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITN-GAEIGCLIS-- 145
L L+ H ++ V + + SGS DG +WD SG+C+ + + G +
Sbjct: 158 LKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFS 217
Query: 146 -EGSWVFLG-LPNAVKSW 161
G ++ L N +K W
Sbjct: 218 PNGKYILTATLDNTLKLW 235
Score = 70 (29.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT 135
L L GH V SN + SGS D V +W+ +G+C+ ++
Sbjct: 116 LKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLS 162
Score = 66 (28.3 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIW 281
+ + W + +C++TL HSD ++++ F + S S D +IW
Sbjct: 146 SVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIW 192
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 94 (38.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 38/139 (27%), Positives = 58/139 (41%)
Query: 237 TTRTWNLDNLECVQTLKG---HSDTVTSLLFWDEY--LFSSSLDETIKIWLYTHTKNNAE 291
T + WN EC TL+G H D V+ + F + S S D +KIW K N
Sbjct: 135 TIKVWNTLG-ECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHT 193
Query: 292 LSSLFGMLDAEA-KP---VLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLF 347
L+ G ++ P + S GKD+ L+EL S K ++ +R + P +
Sbjct: 194 LTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSPNKYW 253
Query: 348 FPGDASGSVGVWKWLLAEQ 366
+ +W LL +Q
Sbjct: 254 LSAATDDKIIIWD-LLTKQ 271
Score = 82 (33.9 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 44 GLAAMAIRVCNNWISDSCVYGD-KCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNV 102
G A +++ ++++ D + D + SW +++ + T ++T + GH + V +V
Sbjct: 60 GKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRL-FKGHTQDVMSV 118
Query: 103 GLPSGSNKLYSGSRDGRVSVWDRDSGRC 130
S + ++ SGSRD + VW+ G C
Sbjct: 119 AFSSDNRQIISGSRDATIKVWNT-LGEC 145
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 100 (40.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 95 (38.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+TIK+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 78 (32.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL 331
Score = 56 (24.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GH +V ++ L S S D + +WD C+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 100 (40.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 95 (38.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+TIK+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 78 (32.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL 331
Score = 56 (24.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GH +V ++ L S S D + +WD C+ +
Sbjct: 146 LKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 100 (40.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 95 (38.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+TIK+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 78 (32.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL 331
Score = 56 (24.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GH +V ++ L S S D + +WD C+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 100 (40.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 95 (38.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+TIK+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 78 (32.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL 331
Score = 56 (24.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GH +V ++ L S S D + +WD C+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 100 (40.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 95 (38.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+TIK+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 78 (32.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL 331
Score = 56 (24.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GH +V ++ L S S D + +WD C+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 100 (40.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 95 (38.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+TIK+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 78 (32.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL 331
Score = 56 (24.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GH +V ++ L S S D + +WD C+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 100 (40.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 95 (38.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+TIK+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 78 (32.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL 331
Score = 56 (24.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GH +V ++ L S S D + +WD C+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 100 (40.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 95 (38.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+TIK+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 78 (32.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL 331
Score = 56 (24.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GH +V ++ L S S D + +WD C+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 100 (40.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 95 (38.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+TIK+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 78 (32.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL 331
Score = 56 (24.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GH +V ++ L S S D + +WD C+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 100 (40.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 45 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 104
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 105 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 164
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 165 LCASGGKDGQAMLW 178
Score = 65 (27.9 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 18 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 54
>TAIR|locus:2115984 [details] [associations]
symbol:YAO "AT4G05410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0000266 "mitochondrial fission" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0005680
"anaphase-promoting complex" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0009553 "embryo sac development" evidence=IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0060321 "acceptance of pollen" evidence=IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009793 EMBL:AL161503 GO:GO:0009553 HSSP:P16649 GO:GO:0080008
HOGENOM:HOG000188732 KO:K14793 OMA:AVGQEHK ProtClustDB:CLSN2685798
EMBL:AY099817 EMBL:BT000325 IPI:IPI00530808 PIR:A85068
RefSeq:NP_192450.1 UniGene:At.27619 UniGene:At.33853
ProteinModelPortal:Q9M0V4 SMR:Q9M0V4 STRING:Q9M0V4 PaxDb:Q9M0V4
PRIDE:Q9M0V4 EnsemblPlants:AT4G05410.1 GeneID:825889
KEGG:ath:AT4G05410 TAIR:At4g05410 InParanoid:Q9M0V4
PhylomeDB:Q9M0V4 Genevestigator:Q9M0V4 GO:GO:0060321 Uniprot:Q9M0V4
Length = 504
Score = 98 (39.6 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 33/129 (25%), Positives = 57/129 (44%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLDETIKIWLYTH----TKNNAELSS 294
W++ E VQ GH +TV+ L F L+S S D T+K+W T+N+
Sbjct: 249 WDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQGE 308
Query: 295 LFGMLDAEAKPVLFSSGKDSAIRLYELP-SFKLRARIFSRREVEVDQIGPAGLFFPGDAS 353
+ +DA K + G+D + +++P S ++ R +E + G +
Sbjct: 309 ILA-IDALRKERALTVGRDRTMLYHKVPESTRMIYRA-PASSLESCCFISDNEYLSGSDN 366
Query: 354 GSVGVWKWL 362
G+V +W L
Sbjct: 367 GTVALWGML 375
Score = 77 (32.2 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 82 TTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI 140
+T+ + ++K H+++V +V L ++ +S S+DG + WD SG+ I EI
Sbjct: 150 STDGFSVIVK---HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEI 205
Score = 42 (19.8 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 7 VDDDDEHKHSEGGETMMSDDDDLMKGRAE----EREE 39
V+D+DE GE ++++ R E EREE
Sbjct: 71 VEDEDEFADETAGEKRKRLAEEMLNRRREAMRREREE 107
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 100 (40.3 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSSLF 296
+ W++ CV +GHS V L F + +L S++ D T+K+W T K +E
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 297 GMLDA-EAKP--VLFSSGK-DSAIRLYELPSFKLRARIFSRR-EVEVDQIGPAGLFFPGD 351
G ++ E P L +SG D IR ++L F++ + I V P G
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSG 249
Query: 352 ASGSVGVWKW 361
S+ V+ W
Sbjct: 250 CQDSLRVYGW 259
Score = 82 (33.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 64 GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
GD CR ++ W S++ N +M L GH V +V L + + +GS+ G + VW
Sbjct: 40 GDDCR-VNLW--SINKPNC------IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 124 DRDSGRCVNVITNGAEIGCLIS---EGSWVFLGLPNA-VKSW 161
D ++ + + + C + G +V G + +K W
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Score = 57 (25.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 83 TNSLATLMKLNGHKKAVTNVGLPSGSNKLYS-GSRDGRVSVWDRDSGRCVNVIT 135
T + L ++ H V+++ L S +L + G D RV++W + C+ +T
Sbjct: 7 TKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Score = 48 (22.0 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 181 GSEGGVISVWKGTFVANPFKQVASIRAPLWFCSL----------SSSNDTR---WNSKEE 227
GS+ G I VW A + + +A + CSL S S DT W+ + +
Sbjct: 81 GSQSGSIRVWD-LEAAKILRTLMGHKANI--CSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 228 AAVFEFCGHT 237
VF + GH+
Sbjct: 138 GCVFRYRGHS 147
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 100 (40.3 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSSLF 296
+ W++ CV +GHS V L F + +L S++ D T+K+W T K +E
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 297 GMLDA-EAKP--VLFSSGK-DSAIRLYELPSFKLRARIFSRR-EVEVDQIGPAGLFFPGD 351
G ++ E P L +SG D IR ++L F++ + I V P G
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSG 249
Query: 352 ASGSVGVWKW 361
S+ V+ W
Sbjct: 250 CQDSLRVYGW 259
Score = 82 (33.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 64 GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
GD CR ++ W S++ N +M L GH V +V L + + +GS+ G + VW
Sbjct: 40 GDDCR-VNLW--SINKPNC------IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 124 DRDSGRCVNVITNGAEIGCLIS---EGSWVFLGLPNA-VKSW 161
D ++ + + + C + G +V G + +K W
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Score = 57 (25.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 83 TNSLATLMKLNGHKKAVTNVGLPSGSNKLYS-GSRDGRVSVWDRDSGRCVNVIT 135
T + L ++ H V+++ L S +L + G D RV++W + C+ +T
Sbjct: 7 TKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Score = 48 (22.0 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 181 GSEGGVISVWKGTFVANPFKQVASIRAPLWFCSL----------SSSNDTR---WNSKEE 227
GS+ G I VW A + + +A + CSL S S DT W+ + +
Sbjct: 81 GSQSGSIRVWD-LEAAKILRTLMGHKANI--CSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 228 AAVFEFCGHT 237
VF + GH+
Sbjct: 138 GCVFRYRGHS 147
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 100 (40.3 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSSLF 296
+ W++ CV +GHS V L F + +L S++ D T+K+W T K +E
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 297 GMLDA-EAKP--VLFSSGK-DSAIRLYELPSFKLRARIFSRR-EVEVDQIGPAGLFFPGD 351
G ++ E P L +SG D IR ++L F++ + I V P G
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSG 249
Query: 352 ASGSVGVWKW 361
S+ V+ W
Sbjct: 250 CQDSLRVYGW 259
Score = 82 (33.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 64 GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
GD CR ++ W S++ N +M L GH V +V L + + +GS+ G + VW
Sbjct: 40 GDDCR-VNLW--SINKPNC------IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 124 DRDSGRCVNVITNGAEIGCLIS---EGSWVFLGLPNA-VKSW 161
D ++ + + + C + G +V G + +K W
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Score = 57 (25.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 83 TNSLATLMKLNGHKKAVTNVGLPSGSNKLYS-GSRDGRVSVWDRDSGRCVNVIT 135
T + L ++ H V+++ L S +L + G D RV++W + C+ +T
Sbjct: 7 TKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Score = 48 (22.0 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 181 GSEGGVISVWKGTFVANPFKQVASIRAPLWFCSL----------SSSNDTR---WNSKEE 227
GS+ G I VW A + + +A + CSL S S DT W+ + +
Sbjct: 81 GSQSGSIRVWD-LEAAKILRTLMGHKANI--CSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 228 AAVFEFCGHT 237
VF + GH+
Sbjct: 138 GCVFRYRGHS 147
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 100 (40.3 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSSLF 296
+ W++ CV +GHS V L F + +L S++ D T+K+W T K +E
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 297 GMLDA-EAKP--VLFSSGK-DSAIRLYELPSFKLRARIFSRR-EVEVDQIGPAGLFFPGD 351
G ++ E P L +SG D IR ++L F++ + I V P G
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSG 249
Query: 352 ASGSVGVWKW 361
S+ V+ W
Sbjct: 250 CQDSLRVYGW 259
Score = 82 (33.9 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 64 GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
GD CR ++ W S++ N +M L GH V +V L + + +GS+ G + VW
Sbjct: 40 GDDCR-VNLW--SINKPNC------IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 124 DRDSGRCVNVITNGAEIGCLIS---EGSWVFLGLPNA-VKSW 161
D ++ + + + C + G +V G + +K W
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Score = 57 (25.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 83 TNSLATLMKLNGHKKAVTNVGLPSGSNKLYS-GSRDGRVSVWDRDSGRCVNVIT 135
T + L ++ H V+++ L S +L + G D RV++W + C+ +T
Sbjct: 7 TKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Score = 48 (22.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 181 GSEGGVISVWKGTFVANPFKQVASIRAPLWFCSL----------SSSNDTR---WNSKEE 227
GS+ G I VW A + + +A + CSL S S DT W+ + +
Sbjct: 81 GSQSGSIRVWD-LEAAKILRTLMGHKANI--CSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 228 AAVFEFCGHT 237
VF + GH+
Sbjct: 138 GCVFRYRGHS 147
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 94 (38.1 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 29/91 (31%), Positives = 45/91 (49%)
Query: 78 DGDNTTNSL-ATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVN-VIT 135
+G N T+SL A +M L+GH AV + + SGS D + +W R G C N ++
Sbjct: 34 NGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLW-RVHGDCKNFMVL 92
Query: 136 NGAEIGCL----ISEGSWVFLGLPN-AVKSW 161
G + L S+GS + P+ V++W
Sbjct: 93 KGHKNAILDLHWTSDGSQIVSASPDKTVRAW 123
Score = 81 (33.6 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSL-LFWD-EYLFSSSLDETIKIW 281
+ W+L E TL+GH DT+T + L D YL ++ +D + +W
Sbjct: 205 KVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVW 249
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 100 (40.3 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSSLF 296
+ W++ CV +GHS V L F + +L S++ D T+K+W T K +E
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 297 GMLDA-EAKP--VLFSSGK-DSAIRLYELPSFKLRARIFSRR-EVEVDQIGPAGLFFPGD 351
G ++ E P L +SG D IR ++L F++ + I V P G
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSG 249
Query: 352 ASGSVGVWKW 361
S+ V+ W
Sbjct: 250 CQDSLRVYGW 259
Score = 82 (33.9 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 64 GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
GD CR ++ W S++ N +M L GH V +V L + + +GS+ G + VW
Sbjct: 40 GDDCR-VNLW--SINKPNC------IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 124 DRDSGRCVNVITNGAEIGCLIS---EGSWVFLGLPNA-VKSW 161
D ++ + + + C + G +V G + +K W
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Score = 57 (25.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 83 TNSLATLMKLNGHKKAVTNVGLPSGSNKLYS-GSRDGRVSVWDRDSGRCVNVIT 135
T + L ++ H V+++ L S +L + G D RV++W + C+ +T
Sbjct: 7 TKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Score = 48 (22.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 181 GSEGGVISVWKGTFVANPFKQVASIRAPLWFCSL----------SSSNDTR---WNSKEE 227
GS+ G I VW A + + +A + CSL S S DT W+ + +
Sbjct: 81 GSQSGSIRVWD-LEAAKILRTLMGHKANI--CSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 228 AAVFEFCGHT 237
VF + GH+
Sbjct: 138 GCVFRYRGHS 147
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 115 (45.5 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 39/132 (29%), Positives = 59/132 (44%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIW------LYTHT-KNN 289
R W L + + +T GH++ V S+ F + + S S D TIK+W YT T K +
Sbjct: 88 RLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGH 147
Query: 290 AELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRA-RIFSRREVEVDQIGPAG-LF 347
E S PV+ S+G D ++++EL S +L+ I + I P G L
Sbjct: 148 TEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLC 207
Query: 348 FPGDASGSVGVW 359
G G +W
Sbjct: 208 ASGGKDGVTMLW 219
Score = 56 (24.8 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 92 LNGHKKAVTNVGLP-SGSNKLYSGSRDGRVSVWD 124
L GH VT++ N L SGSRD + +W+
Sbjct: 11 LEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWN 44
>WB|WBGene00017178 [details] [associations]
symbol:atg-16.1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:FO081068 PIR:T15958
RefSeq:NP_508768.1 ProteinModelPortal:Q19124 SMR:Q19124
PaxDb:Q19124 EnsemblMetazoa:F02E8.5 GeneID:180717
KEGG:cel:CELE_F02E8.5 CTD:180717 WormBase:F02E8.5 eggNOG:COG2319
GeneTree:ENSGT00700000104505 HOGENOM:HOG000016928 InParanoid:Q19124
OMA:STRDDTI NextBio:910606 InterPro:IPR020472 PRINTS:PR00320
Uniprot:Q19124
Length = 578
Score = 135 (52.6 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 34/88 (38%), Positives = 45/88 (51%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAELSSLFG 297
R WNLDN + TL GHSD VT + F+ + S S D IKIW + + + L
Sbjct: 361 RIWNLDNSRLLSTLSGHSDQVTCVKFYQSHSAVSGSADRVIKIWDIQNQRCSRSLFPASK 420
Query: 298 MLDAE----AKPVLFSSGK-DSAIRLYE 320
+LD A P LF+SG D +R Y+
Sbjct: 421 VLDVATNMGASPSLFASGHFDKKLRFYD 448
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 93 (37.8 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 35/141 (24%), Positives = 60/141 (42%)
Query: 236 HTTRTWNLDNLE----CVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNN 289
HT R W LD C+ L+GH +V S+ + + + ++S D T++ W T T +
Sbjct: 323 HTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDIT-TGHC 381
Query: 290 AELSSLF--GMLDAEAKPVLFSSGK-DSAIRLYELPSFKLRARIFSRRE-VEVDQIGPAG 345
+ G+ A+ SG D IR++E S KL + + + +
Sbjct: 382 IRIIHAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEK 441
Query: 346 LFFPGDASGSVGVWKWLLAEQ 366
+ G G+V +W + EQ
Sbjct: 442 IV-SGGYDGTVRIWNFNTGEQ 461
Score = 86 (35.3 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 29/112 (25%), Positives = 45/112 (40%)
Query: 53 CNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLY 112
C + + V G K R + W NS L KL GH +V + N L
Sbjct: 226 CVQYDDEIMVSGSKDRTVSVW--------DVNSRFILYKLYGHSGSVLCLDFCRRRNLLV 277
Query: 113 SGSRDGRVSVWDRDSGRCVNVITNGAE--IGCLISEGSWVFLGLPNAVKSWR 162
SGS D + +WD + R + V + +G ++SE + + + WR
Sbjct: 278 SGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWR 329
Score = 85 (35.0 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 214 LSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSS 273
L+S N +++SK V T RTW++ C++ + H + + +++ S S
Sbjct: 347 LASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVSGS 406
Query: 274 LDETIKIW 281
D TI+I+
Sbjct: 407 SDLTIRIF 414
Score = 83 (34.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 80 DNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI-TNGA 138
D T+ + A + L GH +V +V S + + + S D + WD +G C+ +I +
Sbjct: 331 DATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQR 390
Query: 139 EIGCLISEGSWVFLG 153
I C G ++ G
Sbjct: 391 GIACAQYNGKFIVSG 405
Score = 81 (33.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYT----H-TKNNAE 291
T R + + + ++ L+GH D + ++ F DE + S D T++IW + H +N+
Sbjct: 410 TIRIFEASSGKLLRMLQGHEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQHCVLHNSR 469
Query: 292 LSSLFGM 298
S +FG+
Sbjct: 470 NSRVFGL 476
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 101 (40.6 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 218 NDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLD 275
+D W+S V T + W++ + +C++TLKGHS+ V F + S S D
Sbjct: 65 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 124
Query: 276 ETIKIW 281
E+++IW
Sbjct: 125 ESVRIW 130
Score = 91 (37.1 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
++GHK +++V S SN L S S D + +WD SG+C+ +
Sbjct: 57 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 99
Score = 81 (33.6 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSL--DETIKIW 281
WNL E VQ L+GH+D V S + + S++L D+TIK+W
Sbjct: 260 WNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 77 (32.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSS 294
+ R W++ +C++TL HSD V+++ F + + SSS D +IW T + L +
Sbjct: 126 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKT 182
Query: 295 LFGMLDAEAKPVLF 308
L +D + PV F
Sbjct: 183 L---IDDDNPPVSF 193
Score = 77 (32.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 21/110 (19%), Positives = 52/110 (47%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWD---EYLFSSSLDETIKIWLY-------THTKN 288
R W+ + +C++TL + S + + +Y+ +++LD T+K+W Y T+T +
Sbjct: 170 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 229
Query: 289 NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEV 338
E +F + S +D+ + ++ L + ++ ++ +V +
Sbjct: 230 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVI 279
Score = 74 (31.1 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L L GH V SN + SGS D V +WD +G+C+ +
Sbjct: 96 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 141
Score = 71 (30.1 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSW 149
L GH KAV++V L S S D + +W G+ I+ G ++G IS+ +W
Sbjct: 15 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLG--ISDVAW 69
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 98 (39.6 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSSLF 296
+ W++ CV +GHS V L F + +L S++ D T+K+W T K +E
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 297 GMLDA-EAKP--VLFSSGK-DSAIRLYELPSFKL 326
G ++ E P L +SG D IR ++L F++
Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV 223
Score = 82 (33.9 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 64 GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
GD CR ++ W S++ N +M L GH V +V L + + +GS+ G + VW
Sbjct: 40 GDDCR-VNLW--SINKPNC------IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 124 DRDSGRCVNVITNGAEIGCLIS---EGSWVFLGLPNA-VKSW 161
D ++ + + + C + G +V G + +K W
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 101 (40.6 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L +L GH+ +T+V L SN L + S+DG + +WD ++ C+ I
Sbjct: 136 LFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTI 181
Score = 76 (31.8 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 28/117 (23%), Positives = 50/117 (42%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW---LYTHTKN-NAEL 292
+ W LD +C ++ H D++ + F + S+S D+ IK W + H + A
Sbjct: 598 KIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKDKRIKYWDADKFEHIQTIEAHH 657
Query: 293 SSLFGMLDAEAKPVLFSSGKDSAIRLY---ELPSFKLRARIFSRREVEVDQIGPAGL 346
++ + S D +IR++ E P F + S R+ E++Q A L
Sbjct: 658 GEVWSLAMGSVGDFFISGSHDRSIRIFNQTETPIF-----VESDRQREMEQTWEATL 709
Score = 48 (22.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 22/102 (21%), Positives = 35/102 (34%)
Query: 151 FLGLPNAVKSWRXXXXXXXXXXXXXXXXXXGSEGGVISVWKGTFVANPFKQVASIRAPLW 210
F N +K W +GG G F + A R+ +
Sbjct: 347 FFSFGNDIKHWNKFVITLAGNSLEAYEIKEKEQGG------GAFEVSSTLDQAGHRSDIR 400
Query: 211 FCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTL 252
SLSS ND S +V + WN+ +L C++++
Sbjct: 401 SLSLSS-NDQMLVSTSSESV--------KVWNMKSLSCIRSI 433
>POMBASE|SPCC126.01c [details] [associations]
symbol:SPCC126.01c "conserved fungal protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC126.01c GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 PIR:T40905 RefSeq:NP_588444.2
ProteinModelPortal:O94394 EnsemblFungi:SPCC126.01c.1 GeneID:2538691
KEGG:spo:SPCC126.01c OMA:WTASADK OrthoDB:EOG4BK8CJ NextBio:20799877
Uniprot:O94394
Length = 369
Score = 109 (43.4 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAE 291
R W+ GH ++VT +L W YL SSSLD+TI++W ++ +N E
Sbjct: 289 RVWDTTTGNVKDIYSGHYESVTKILQWKSYLISSSLDQTIRVWDLEYSADNNE 341
Score = 64 (27.6 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 66 KCRFLH--SWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
K R ++ SW H++ N + + L GH V + L L SGS D + VW
Sbjct: 101 KVRHIYTGSWDHTIKKWNVSTG-ECVETLIGHTDYVKCLLLLEEEGLLLSGSTDASLIVW 159
Query: 124 DRDS--GRCVNVITNGAE-IGCLISEGSW-VF--LGLPNAVKSW 161
D S R + +T + I C+ + + +F G ++++ W
Sbjct: 160 DVSSQPSRLLYKLTGHSRGIECITRQPNTDIFWTCGSESSIRCW 203
Score = 59 (25.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 88 TLMKLNGHKKAVTNVGLPS----GSNK-LYSGSRDGRVSVWDRDSGRCVNVITNGAE-IG 141
T GH VT + S G + +Y+GS D + W+ +G CV + + +
Sbjct: 77 TCKTYKGHSGPVTCCQIESLRKDGKVRHIYTGSWDHTIKKWNVSTGECVETLIGHTDYVK 136
Query: 142 CLI 144
CL+
Sbjct: 137 CLL 139
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 100 (40.3 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 92 (37.4 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S++ D+TIK+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMW 219
Score = 75 (31.5 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S +RD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCL 331
Score = 56 (24.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GH +V ++ L S S D + +WD C+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 101 (40.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 218 NDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLD 275
+D W+S V T + W++ + +C++TLKGHS+ V F + S S D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 276 ETIKIW 281
E+++IW
Sbjct: 151 ESVRIW 156
Score = 91 (37.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
++GHK +++V S SN L S S D + +WD SG+C+ +
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 81 (33.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSL--DETIKIW 281
WNL E VQ L+GH+D V S + + S++L D+TIK+W
Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSS 294
+ R W++ +C++TL HSD V+++ F + + SSS D +IW T + L +
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKT 208
Query: 295 LFGMLDAEAKPVLF 308
L +D + PV F
Sbjct: 209 L---IDDDNPPVSF 219
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 21/110 (19%), Positives = 52/110 (47%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWD---EYLFSSSLDETIKIWLY-------THTKN 288
R W+ + +C++TL + S + + +Y+ +++LD T+K+W Y T+T +
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255
Query: 289 NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEV 338
E +F + S +D+ + ++ L + ++ ++ +V +
Sbjct: 256 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVI 305
Score = 74 (31.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L L GH V SN + SGS D V +WD +G+C+ +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Score = 71 (30.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSW 149
L GH KAV++V L S S D + +W G+ I+ G ++G IS+ +W
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLG--ISDVAW 95
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 101 (40.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 218 NDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLD 275
+D W+S V T + W++ + +C++TLKGHS+ V F + S S D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 276 ETIKIW 281
E+++IW
Sbjct: 151 ESVRIW 156
Score = 91 (37.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
++GHK +++V S SN L S S D + +WD SG+C+ +
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 81 (33.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSL--DETIKIW 281
WNL E VQ L+GH+D V S + + S++L D+TIK+W
Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSS 294
+ R W++ +C++TL HSD V+++ F + + SSS D +IW T + L +
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKT 208
Query: 295 LFGMLDAEAKPVLF 308
L +D + PV F
Sbjct: 209 L---IDDDNPPVSF 219
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 21/110 (19%), Positives = 52/110 (47%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWD---EYLFSSSLDETIKIWLY-------THTKN 288
R W+ + +C++TL + S + + +Y+ +++LD T+K+W Y T+T +
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255
Query: 289 NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEV 338
E +F + S +D+ + ++ L + ++ ++ +V +
Sbjct: 256 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVI 305
Score = 74 (31.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L L GH V SN + SGS D V +WD +G+C+ +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Score = 71 (30.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSW 149
L GH KAV++V L S S D + +W G+ I+ G ++G IS+ +W
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLG--ISDVAW 95
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 101 (40.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 218 NDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLD 275
+D W+S V T + W++ + +C++TLKGHS+ V F + S S D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 276 ETIKIW 281
E+++IW
Sbjct: 151 ESVRIW 156
Score = 91 (37.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
++GHK +++V S SN L S S D + +WD SG+C+ +
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 81 (33.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSL--DETIKIW 281
WNL E VQ L+GH+D V S + + S++L D+TIK+W
Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSS 294
+ R W++ +C++TL HSD V+++ F + + SSS D +IW T + L +
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKT 208
Query: 295 LFGMLDAEAKPVLF 308
L +D + PV F
Sbjct: 209 L---IDDDNPPVSF 219
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 21/110 (19%), Positives = 52/110 (47%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWD---EYLFSSSLDETIKIWLY-------THTKN 288
R W+ + +C++TL + S + + +Y+ +++LD T+K+W Y T+T +
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255
Query: 289 NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEV 338
E +F + S +D+ + ++ L + ++ ++ +V +
Sbjct: 256 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVI 305
Score = 74 (31.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L L GH V SN + SGS D V +WD +G+C+ +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Score = 71 (30.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSW 149
L GH KAV++V L S S D + +W G+ I+ G ++G IS+ +W
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLG--ISDVAW 95
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 101 (40.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 218 NDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLD 275
+D W+S V T + W++ + +C++TLKGHS+ V F + S S D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 276 ETIKIW 281
E+++IW
Sbjct: 151 ESVRIW 156
Score = 91 (37.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
++GHK +++V S SN L S S D + +WD SG+C+ +
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 81 (33.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSL--DETIKIW 281
WNL E VQ L+GH+D V S + + S++L D+TIK+W
Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSS 294
+ R W++ +C++TL HSD V+++ F + + SSS D +IW T + L +
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKT 208
Query: 295 LFGMLDAEAKPVLF 308
L +D + PV F
Sbjct: 209 L---IDDDNPPVSF 219
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 21/110 (19%), Positives = 52/110 (47%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWD---EYLFSSSLDETIKIWLY-------THTKN 288
R W+ + +C++TL + S + + +Y+ +++LD T+K+W Y T+T +
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255
Query: 289 NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEV 338
E +F + S +D+ + ++ L + ++ ++ +V +
Sbjct: 256 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVI 305
Score = 74 (31.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L L GH V SN + SGS D V +WD +G+C+ +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Score = 71 (30.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSW 149
L GH KAV++V L S S D + +W G+ I+ G ++G IS+ +W
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLG--ISDVAW 95
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 101 (40.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 218 NDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLD 275
+D W+S V T + W++ + +C++TLKGHS+ V F + S S D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 276 ETIKIW 281
E+++IW
Sbjct: 151 ESVRIW 156
Score = 91 (37.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
++GHK +++V S SN L S S D + +WD SG+C+ +
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 81 (33.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSL--DETIKIW 281
WNL E VQ L+GH+D V S + + S++L D+TIK+W
Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSS 294
+ R W++ +C++TL HSD V+++ F + + SSS D +IW T + L +
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKT 208
Query: 295 LFGMLDAEAKPVLF 308
L +D + PV F
Sbjct: 209 L---IDDDNPPVSF 219
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 21/110 (19%), Positives = 52/110 (47%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWD---EYLFSSSLDETIKIWLY-------THTKN 288
R W+ + +C++TL + S + + +Y+ +++LD T+K+W Y T+T +
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255
Query: 289 NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEV 338
E +F + S +D+ + ++ L + ++ ++ +V +
Sbjct: 256 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVI 305
Score = 74 (31.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L L GH V SN + SGS D V +WD +G+C+ +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Score = 71 (30.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSW 149
L GH KAV++V L S S D + +W G+ I+ G ++G IS+ +W
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLG--ISDVAW 95
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 101 (40.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 218 NDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLD 275
+D W+S V T + W++ + +C++TLKGHS+ V F + S S D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 276 ETIKIW 281
E+++IW
Sbjct: 151 ESVRIW 156
Score = 91 (37.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
++GHK +++V S SN L S S D + +WD SG+C+ +
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 81 (33.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSL--DETIKIW 281
WNL E VQ L+GH+D V S + + S++L D+TIK+W
Sbjct: 286 WNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSS 294
+ R W++ +C++TL HSD V+++ F + + SSS D +IW T + L +
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKT 208
Query: 295 LFGMLDAEAKPVLF 308
L +D + PV F
Sbjct: 209 L---IDDDNPPVSF 219
Score = 75 (31.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 21/110 (19%), Positives = 52/110 (47%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWD---EYLFSSSLDETIKIWLY-------THTKN 288
R W+ + +C++TL + S + + +Y+ +++LD T+K+W Y T+T +
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCH 255
Query: 289 NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEV 338
E +F + S +D+ + ++ L + ++ ++ +V +
Sbjct: 256 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVI 305
Score = 74 (31.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L L GH V SN + SGS D V +WD +G+C+ +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Score = 71 (30.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSW 149
L GH KAV++V L S S D + +W G+ I+ G ++G IS+ +W
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLG--ISDVAW 95
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 100 (40.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIW 281
T R W+ N C++TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 92 (37.4 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+T+K+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMW 219
Score = 74 (31.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHRE 235
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAG 140
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 111 LYSGSRDGRVSVWDRDSGRCV 131
L SGSRD + +WD +G C+
Sbjct: 311 LLSGSRDKTIKMWDISTGMCL 331
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 112 (44.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 38/134 (28%), Positives = 59/134 (44%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYTHTKN 288
T R W+L+ EC GH+ V S+ + + S S D+TIKIW YT T
Sbjct: 86 TIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDG 145
Query: 289 -NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRRE-VEVDQIGPAG- 345
+++ S S+G D A+++++L +F LR + V I P G
Sbjct: 146 GHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G++ +W
Sbjct: 206 LCASGGRDGTLMLW 219
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 92 LNGHKKAVTNVGL-PSGSNKLYSGSRDGRVSVWD 124
L GH VT++ P + L SGSRD + +W+
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWN 44
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 98 (39.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+ N C +TL H VTSL F Y+ + S+D+T+K+W
Sbjct: 361 TLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 95 (38.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++T+ GH V+S+ +++ S+S D+TIK+W
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 76 (31.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
++GH V++V + + + S SRD + +W+ +G CV T E
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHRE 235
Score = 67 (28.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L+GH+ VT V + + S S D + VWD ++G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETG 140
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 99 (39.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
T R W+L N C++TL H TS+ F Y+ S S+D+T+K+W
Sbjct: 362 TIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Score = 74 (31.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 85 SLATLMKLNGHKKAVTNVG-LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCL 143
S + ++GH V++V +P+G L S SRD + +W+ +G CV T E +
Sbjct: 182 SYECIKTMHGHDHNVSSVAFVPAGDYVL-SASRDRTIKMWEVATGYCVKTYTGHREWVRM 240
Query: 144 IS---EGSWVFLGLPN--AVKSW 161
+ EGS +F N ++ W
Sbjct: 241 VRVHIEGS-IFATCSNDQTIRVW 262
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 40/131 (30%), Positives = 57/131 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T R WNL + V L+GHS VT L F L S S+D+TI+IW Y + + +S L
Sbjct: 294 TIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNY---RTSECISILH 350
Query: 297 GMLDAEA-----KPVLFSSGKDSAIRLYELPSFK---LRARIFSRREVEVDQIGPAGLFF 348
G D+ +L S D ++L+ K LR V + I GL
Sbjct: 351 GHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRI--IRDRGLVL 408
Query: 349 PGDASGSVGVW 359
G ++ +W
Sbjct: 409 SGSDDSTIKIW 419
Score = 113 (44.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/128 (27%), Positives = 55/128 (42%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T R WN EC+ L GH+D+V L F L S S D T+K+W ++ K L
Sbjct: 334 TIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKR-ITLRGHT 392
Query: 297 GMLDA----EAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFFPGD 351
G +++ + ++ S DS I+++ L + FS V + A F
Sbjct: 393 GPVNSVRIIRDRGLVLSGSDDSTIKIWSLET-NTCLHTFSAHIGPVQSLALADSRLFSCS 451
Query: 352 ASGSVGVW 359
G++ W
Sbjct: 452 LDGTIKQW 459
Score = 99 (39.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSS 294
+ W + ECV TLK HS+ VTS+ D + S S D I +WL+ + N + +S+
Sbjct: 497 KVW--EACECVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYLWLFNNAPNESPVST 550
Score = 91 (37.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 41/130 (31%), Positives = 60/130 (46%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSL-LFWDEYL-FSSSLDETIKIW-LYTHTKNNAELS 293
T + W+ + + TL+GH+ V S+ + D L S S D TIKIW L T+T + S
Sbjct: 374 TVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHT-FS 431
Query: 294 SLFGMLD--AEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGL-FFPG 350
+ G + A A LFS D I+ +++ K +F E V +I L G
Sbjct: 432 AHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIE-GVWEIAADHLRLISG 490
Query: 351 DASGSVGVWK 360
G V VW+
Sbjct: 491 AHDGVVKVWE 500
Score = 83 (34.3 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLY---THT-KNNAEL 292
T + W+++ +CV TL GH + V + L S + D +K+W HT KN++E
Sbjct: 455 TIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWEACECVHTLKNHSEP 514
Query: 293 SSLFGMLDAEAKPVLFSSGKDSAIRLY 319
+ + D E + S +D I L+
Sbjct: 515 VTSVALGDCE----VVSGSEDGKIYLW 537
Score = 78 (32.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 85 SLATLMK---LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE-I 140
+LAT + L GH VT L KL SGS D + +W+ + C++++ + +
Sbjct: 299 NLATFQQVALLEGHSSGVTC--LQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSV 356
Query: 141 GCLISEGSWVFLGLPNA-VKSW 161
CL + + + G + VK W
Sbjct: 357 LCLTFDSTLLVSGSADCTVKLW 378
Score = 70 (29.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/74 (28%), Positives = 32/74 (43%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIG---CLISEGS 148
L GH V +V + + SGS D + +W ++ C++ T A IG L S
Sbjct: 388 LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLH--TFSAHIGPVQSLALADS 445
Query: 149 WVF-LGLPNAVKSW 161
+F L +K W
Sbjct: 446 RLFSCSLDGTIKQW 459
Score = 63 (27.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 30/128 (23%), Positives = 56/128 (43%)
Query: 13 HKHSEGGETMMSDDDDLMKGRAEEREEMFGF-GLAAMAIRVCNNWISDSCVYGDKCRFLH 71
H H++ + D L+ G A+ +++ F G + +R ++ + D+
Sbjct: 350 HGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDR----- 404
Query: 72 SWVHSVDGDNTTN--SLAT---LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRD 126
V S D+T SL T L + H V ++ L ++L+S S DG + WD +
Sbjct: 405 GLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLAL--ADSRLFSCSLDGTIKQWDIE 462
Query: 127 SGRCVNVI 134
+CV+ +
Sbjct: 463 KKKCVHTL 470
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/102 (22%), Positives = 44/102 (43%)
Query: 62 VYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVS 121
VY ++CR +W H + L+GH V + L N L SGS D +
Sbjct: 248 VYAERCRVECNWRHG---------RCRQVVLSGHSDGVMCLQLVR--NILASGSYDATIR 296
Query: 122 VWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLG-LPNAVKSW 161
+W+ + + V ++ + + + CL + + G + ++ W
Sbjct: 297 LWNLATFQQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIW 338
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 89 (36.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
+ W+L N C LKGH D +TSL + L S+S+D T++I+
Sbjct: 202 KIWDLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIF 246
Score = 82 (33.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 34/112 (30%), Positives = 46/112 (41%)
Query: 56 WISDS-CVY-GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVG-LPSGSNKLY 112
W DS VY L SW +V G + K GH V + L GS L
Sbjct: 101 WSRDSRVVYCSSSDTHLMSW-DAVSGQK-------IRKHKGHAGVVNALDVLKVGSELLT 152
Query: 113 SGSRDGRVSVWDRDSGRCVNVITNGAEIGC--LISEGSWVFLG-LPNAVKSW 161
S S D + VWD S C+ I + + +G+ VF+G + A+K W
Sbjct: 153 SVSDDCTMKVWDSRSKDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIW 204
>TAIR|locus:2063099 [details] [associations]
symbol:AT2G40360 "AT2G40360" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR012953 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08145
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM01035
GO:GO:0005634 EMBL:CP002685 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0051726 GO:GO:0006364
KO:K14824 OMA:PPPEYLF UniGene:At.25164 IPI:IPI01020550
RefSeq:NP_181567.3 ProteinModelPortal:F4IH25 SMR:F4IH25
PRIDE:F4IH25 EnsemblPlants:AT2G40360.1 GeneID:818629
KEGG:ath:AT2G40360 Uniprot:F4IH25
Length = 753
Score = 96 (38.9 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 90 MKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCL 143
++ GH AVT++ S + SGS DG V +W+ ++GRC+ V I C+
Sbjct: 417 LEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCV 470
Score = 62 (26.9 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 8 DDDDEHKHSEGGETMMSDDDDLMK 31
+DD H+ +E G+ SDDDD+++
Sbjct: 74 EDDGTHEGTEDGDVEFSDDDDVLE 97
Score = 55 (24.4 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 293 SSLFGMLDAE---AKPVLFSSGKDSAIRLY 319
SS G+LD + +P LF++G DS I+LY
Sbjct: 722 SSKGGVLDCKFHPRQPWLFTAGADSIIKLY 751
Score = 49 (22.3 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 8 DDDDEHKHSEGGETMMSDDDDLMKGRAEEREE 39
DD EH S+ E SD+D +G A E +
Sbjct: 107 DDGSEHVGSDNNEEHGSDEDS-ERGEAVEESD 137
Score = 41 (19.5 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 250 QTLKGHSDTVTSLLFWDEY-LFSS-SLDETIKIW 281
+TLK H +T++ Y LF+S S D T ++
Sbjct: 665 KTLKNHPKDITNVAVHRSYPLFASCSEDSTAYVF 698
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 94 (38.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 35/130 (26%), Positives = 56/130 (43%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSSLF 296
+ W++ C+ K H+ V L F + +L S++ D T+K+W T K E +
Sbjct: 130 KLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHS 189
Query: 297 GMLDA-EAKP--VLFSSGK-DSAIRLYELPSFKLRARIFSRRE-VEVDQIGPAGLFFPGD 351
G ++ E P L +SG D IR ++L F + + I V P G G
Sbjct: 190 GPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGG 249
Query: 352 ASGSVGVWKW 361
S+ V+ W
Sbjct: 250 FQDSLRVYGW 259
Score = 83 (34.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 26/102 (25%), Positives = 47/102 (46%)
Query: 64 GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
GD CR ++ W SV+ N +M L GH + ++ + + + +GS+ G + VW
Sbjct: 40 GDDCR-VNVW--SVNKPNC------VMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVW 90
Query: 124 DRDSGRCVNVITNGAEIGCLIS---EGSWVFLG-LPNAVKSW 161
D ++ + + + C + GS+V G L +K W
Sbjct: 91 DLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 132
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 92 (37.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 218 NDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLD 275
+D W+S V T + W L + ++TLKGHS+ V F + S S D
Sbjct: 118 SDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 177
Query: 276 ETIKIW 281
E+++IW
Sbjct: 178 ESVRIW 183
Score = 86 (35.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 241 WNLDNLECVQTLKGHSDTV--TSLLFWDEYLFSSSL--DETIKIW 281
WNL + E VQ L+GH+DTV T+ + + S++L D+TIK+W
Sbjct: 313 WNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 85 (35.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 40/130 (30%), Positives = 54/130 (41%)
Query: 14 KHSEGGETMMSDD-DDLMK------GRAEEREEMFGFGLAAMAIRVCNNWISDS--CVYG 64
K S GE + S D L+K G+ E+ G++ +A W SDS V G
Sbjct: 79 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA------WSSDSRLLVSG 132
Query: 65 DKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
+ L W S T SL TL GH V SN + SGS D V +WD
Sbjct: 133 SDDKTLKVWELS-----TGKSLKTL---KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 184
Query: 125 RDSGRCVNVI 134
+G+C+ +
Sbjct: 185 VRTGKCLKTL 194
Score = 77 (32.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 21/95 (22%), Positives = 45/95 (47%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWD---EYLFSSSLDETIKIWLY-------THTKN 288
R W+ + +C++TL + S + + +Y+ +++LD T+K+W Y T+T +
Sbjct: 223 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 282
Query: 289 NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPS 323
E +F + S +D+ + ++ L S
Sbjct: 283 KNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQS 317
Score = 76 (31.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSS 294
+ R W++ +C++TL HSD V+++ F + + SSS D +IW T + L +
Sbjct: 179 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKT 235
Query: 295 LFGMLDAEAKPVLF 308
L +D + PV F
Sbjct: 236 L---IDDDNPPVSF 246
Score = 68 (29.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSW 149
L GH KAV+ V L S S D + +W G+ I+ G ++G IS+ +W
Sbjct: 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLG--ISDVAW 122
>TAIR|locus:2066276 [details] [associations]
symbol:AT2G26490 "AT2G26490" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AC002505 HOGENOM:HOG000236376
ProtClustDB:CLSN2681936 EMBL:BT015086 EMBL:BT015900 IPI:IPI00520584
PIR:T00982 RefSeq:NP_180217.1 UniGene:At.50101
ProteinModelPortal:O48716 SMR:O48716 STRING:O48716 PaxDb:O48716
PRIDE:O48716 EnsemblPlants:AT2G26490.1 GeneID:817190
KEGG:ath:AT2G26490 TAIR:At2g26490 InParanoid:O48716 OMA:KVSPKNG
PhylomeDB:O48716 ArrayExpress:O48716 Genevestigator:O48716
Uniprot:O48716
Length = 465
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 70/361 (19%), Positives = 138/361 (38%)
Query: 22 MMSDDDDLMKGRAEEREEMFGF-GLAAMAI------RV-CNNWISDSCVYGDKCRFLHSW 73
MM D +L ++ EE +G +A A+ R+ C + F +
Sbjct: 16 MMHSDPNLSSTMTQQTEEEYGIRNSSASAVGTGMYDRMSCEGSPMMMSPWNQATPFTQTQ 75
Query: 74 VHSVDGDNTTNSL-ATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVN 132
+V+ + N L +L++ GH + L + + LY+GS + VW ++
Sbjct: 76 WSTVEENLPQNGLIGSLVREEGHIYS-----LAATKDLLYTGSDSKNIRVW-KNLKEFSA 129
Query: 133 VITNGAEIGCLISEGSWVFLGLPNA-VKSWRXXXXXXXXXXXXXXXXXXGSEGGVISVWK 191
N + ++ G +F G + ++ W+ G+ + ++K
Sbjct: 130 FKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQSLHKRS------GTLPTLKDIFK 183
Query: 192 GTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQT 251
+ + +V R LW + + N ++ T + W + + +C+++
Sbjct: 184 ASLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLES 243
Query: 252 LKGHSDTVTSLLFWDEYL-FSSSLDETIKIWL------YT-HTKNNA---ELSSLFGMLD 300
+ H D V S++ E + FS S D T+K W YT HT + S++ +
Sbjct: 244 IPAHDDAVNSVVSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAV 303
Query: 301 AEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAG-LFFPGDASGSVGVW 359
++ ++ D + +E I ++ V + AG L F G A ++ VW
Sbjct: 304 SKNGAAVYFGSSDGLVNFWEREKQLNYGGILKGHKLAVLCLEVAGSLVFSGSADKTICVW 363
Query: 360 K 360
K
Sbjct: 364 K 364
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 95 (38.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDS-GRCVNVITNGA 138
++GH +V+ V G LYSGS D V VWD +S GRC+N++ + A
Sbjct: 274 MSGHTNSVSCVKW-GGQGLLYSGSHDRTVRVWDINSQGRCINILKSHA 320
Score = 79 (32.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 26/110 (23%), Positives = 53/110 (48%)
Query: 224 SKEEAAVFEFCGHTTRTWN-LDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKI 280
+ EE V +T WN L + + + + GH V + F + Y+ S+S D +IK+
Sbjct: 369 NSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKL 428
Query: 281 WLYTHTKN----NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKL 326
W K ++S++ + + +L S KD+ ++++++ + KL
Sbjct: 429 WDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKL 478
Score = 64 (27.6 bits), Expect = 0.00084, Sum P(2) = 0.00083
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAEL- 292
++ + W+ + + + T +GH +V + + + L S S D T+K+W K + +L
Sbjct: 424 NSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLP 483
Query: 293 ---SSLFGM-LDAEAKPVLFSSGKDSAIRLY 319
++ + + K V S GKD +RL+
Sbjct: 484 GHKDEVYTVDWSVDGKRVC-SGGKDKMVRLW 513
>UNIPROTKB|O43818 [details] [associations]
symbol:RRP9 "U3 small nucleolar RNA-interacting protein 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=TAS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471055 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003723 GO:GO:0006364 GO:GO:0030532
GO:GO:0005732 HOGENOM:HOG000188732 KO:K14793 EMBL:AJ001340
EMBL:AK313696 EMBL:BC001113 EMBL:BC009879 EMBL:BC010048
EMBL:BC023662 IPI:IPI00217862 RefSeq:NP_004695.1 UniGene:Hs.153768
ProteinModelPortal:O43818 SMR:O43818 IntAct:O43818 STRING:O43818
PhosphoSite:O43818 DOSAC-COBS-2DPAGE:O43818 SWISS-2DPAGE:O43818
PaxDb:O43818 PeptideAtlas:O43818 PRIDE:O43818 DNASU:9136
Ensembl:ENST00000232888 GeneID:9136 KEGG:hsa:9136 UCSC:uc003dbw.1
CTD:9136 GeneCards:GC03M051943 HGNC:HGNC:16829 HPA:HPA038798
neXtProt:NX_O43818 PharmGKB:PA162402176 HOVERGEN:HBG079296
InParanoid:O43818 OMA:AAKDCTI OrthoDB:EOG4XKV6X PhylomeDB:O43818
GenomeRNAi:9136 NextBio:34259 Bgee:O43818 CleanEx:HS_RRP9
Genevestigator:O43818 GermOnline:ENSG00000114767 Uniprot:O43818
Length = 475
Score = 105 (42.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 33/130 (25%), Positives = 59/130 (45%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGM 298
W + + + T GH D V+ L F L+S+S D ++K+W + N+ + +LFG
Sbjct: 226 WEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVW---NVAENSYVETLFGH 282
Query: 299 LDAEA-------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGL--FFP 349
DA A + + + G+D +R++++P +F + +D I
Sbjct: 283 QDAVAALDALSRECCVTAGGRDGTVRVWKIPEES--QLVFYGHQGSIDCIHLINEEHMVS 340
Query: 350 GDASGSVGVW 359
G GSV +W
Sbjct: 341 GADDGSVALW 350
Score = 67 (28.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 87 ATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITN---GAE 139
A + L GH+ ++T + + + ++S ++D + W +SGR ++VI GAE
Sbjct: 137 ADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIPRAKKGAE 192
>SGD|S000003648 [details] [associations]
symbol:MDV1 "Peripheral protein of cytosolic face of
mitochondrial outer membrane" species:4932 "Saccharomyces
cerevisiae" [GO:0005741 "mitochondrial outer membrane"
evidence=IEA;IDA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IGI;IMP]
[GO:0000266 "mitochondrial fission" evidence=IGI;IMP;IPI]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016559 "peroxisome fission"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003648 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741 EMBL:BK006943
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000002
GO:GO:0016559 GO:GO:0043130 GeneTree:ENSGT00550000075528
HOGENOM:HOG000048466 OrthoDB:EOG469V30 GO:GO:0000266 PDB:2PQN
PDB:3UUX PDBsum:2PQN PDBsum:3UUX EMBL:Z49387 PIR:S56893
RefSeq:NP_012423.1 PDB:2XU6 PDBsum:2XU6 ProteinModelPortal:P47025
SMR:P47025 DIP:DIP-1907N IntAct:P47025 MINT:MINT-389558
STRING:P47025 PaxDb:P47025 EnsemblFungi:YJL112W GeneID:853332
KEGG:sce:YJL112W CYGD:YJL112w OMA:YSSPYKK EvolutionaryTrace:P47025
NextBio:973700 Genevestigator:P47025 GermOnline:YJL112W
InterPro:IPR021061 Pfam:PF11542 Uniprot:P47025
Length = 714
Score = 111 (44.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-LYTHTKNNAELSSLFG 297
R W+L + + ++TLKGH+D +TSL F L + S D T++IW L T N S
Sbjct: 589 RLWDLRSGKVIRTLKGHTDAITSLKFDSACLVTGSYDRTVRIWDLRTGLLNKFHAYSAPV 648
Query: 298 M-LDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIG-PAGLFFPGDASGS 355
+ LD + + ++++Y+ + + + E V + G +G
Sbjct: 649 LSLDLFQENAAVVVADEPSVQIYDSEKDESWSCVEQGNETSVSTVKYKENYMVEGRENGD 708
Query: 356 VGVW 359
V +W
Sbjct: 709 VNIW 712
Score = 65 (27.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 24/97 (24%), Positives = 40/97 (41%)
Query: 95 HKKAVTNVGL-PSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVFLG 153
H VT + L PS L SGS+D + WD SG+C+ I +++ + V L
Sbjct: 501 HTDEVTALSLDPSF---LVSGSQDRTIRQWDLRSGKCLQTID--LSFANVLTTSTNVDLS 555
Query: 154 LPNAVKSWRXXXXXXXXXXXXXXXXXXGSEGGVISVW 190
+ + + R G++ GV+ +W
Sbjct: 556 -KSTLLTQRNERPSIGALQSFDAALATGTKDGVVRLW 591
Score = 60 (26.2 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 81 NTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
N S +TL+ + ++ L S L +G++DG V +WD SG+ + +
Sbjct: 551 NVDLSKSTLLTQRNERPSIG--ALQSFDAALATGTKDGVVRLWDLRSGKVIRTL 602
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 94 (38.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
+ W+L + T++GH+D+VT L E YL S+++D T+++W
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 75 (31.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 68 RFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDS 127
R + W SV GD ++ ATL GH AV + + + L+S S D V+VWD ++
Sbjct: 89 RLILLW--SVYGD--CDNYATL---KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Query: 128 GRCV 131
G V
Sbjct: 142 GERV 145
Score = 61 (26.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 91 KLNGHKKAVTNVGLPS--GSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI-GCLISEG 147
+L GH V N P+ G + +GS DG V +WD + N ++ ++
Sbjct: 147 RLKGHTSFV-NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDT 205
Query: 148 SWVFL--GLPNAVKSW 161
S + G+ N +K W
Sbjct: 206 SDQIISGGIDNDIKVW 221
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 115 (45.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 30/111 (27%), Positives = 55/111 (49%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAEL---S 293
T R WN EC+ T +GHSD+V S+ + + + S S D+T+K+W + ++ L +
Sbjct: 363 TIRVWNYITGECISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVW-HVESRTCYTLRGHT 421
Query: 294 SLFGMLDAEAKPV-LFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGP 343
+ K FS D+ IR++++ + ++F +V +I P
Sbjct: 422 EWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSC-LKVFRGHVGQVQKIIP 471
Score = 58 (25.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/75 (20%), Positives = 33/75 (44%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE-IGCLISEG 147
+ + GH V L L++GS D + +WD +G+ + ++ ++ + L +
Sbjct: 295 IQEFKGHMDGVLT--LQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDD 352
Query: 148 SWVFLG-LPNAVKSW 161
+ G L ++ W
Sbjct: 353 RKLITGSLDKTIRVW 367
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 101 (40.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 28/89 (31%), Positives = 41/89 (46%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGM 298
R W+L C L+GH VT L + L S S D TI+IW K L S G
Sbjct: 572 RVWDLSTGTCKYVLEGHDAFVTLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGY 631
Query: 299 LDAEAKPV-LFSSGKDSAIRLYELPSFKL 326
+ + SG D +++L+++ + KL
Sbjct: 632 ISSFVSDEHKIISGNDGSVKLWDVRTGKL 660
Score = 101 (40.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW-LYTHT-KNNAELSS 294
R W + EC+ L+GHS + S+L+ E S S+D++I++W L T T K E
Sbjct: 530 RIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHD 589
Query: 295 LFGMLDAEAKPVLFSSGKDSAIRLYELPSFK 325
F L + L S DS IR+++L + K
Sbjct: 590 AFVTLLNVFQNRLISGSADSTIRIWDLNTGK 620
Score = 74 (31.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 91 KLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI-GCL 143
+L GHK+ V V + N L SGS D V VW+ + +C ++ I CL
Sbjct: 386 RLEGHKEGVWAVKIHE--NTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCL 437
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 92 (37.4 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 356 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 413
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 414 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 453
Score = 88 (36.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 369 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 413
Score = 80 (33.2 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAE 291
C++TL HS V L F DE+ + SSS D+TI IW + + +N +
Sbjct: 469 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVSSNGQ 512
Score = 76 (31.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 109 NKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
+K+ SG RD + +WD+ S C+ V+T + + CL + + G ++ V+ W
Sbjct: 236 DKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 290
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 86 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 206 LCASGGKDGQAMLW 219
Score = 65 (27.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 86 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 206 LCASGGKDGQAMLW 219
Score = 65 (27.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 86 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 206 LCASGGKDGQAMLW 219
Score = 65 (27.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 86 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 206 LCASGGKDGQAMLW 219
Score = 65 (27.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 86 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 206 LCASGGKDGQAMLW 219
Score = 65 (27.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 86 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 206 LCASGGKDGQAMLW 219
Score = 65 (27.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 86 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 206 LCASGGKDGQAMLW 219
Score = 65 (27.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 86 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 206 LCASGGKDGQAMLW 219
Score = 65 (27.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 95
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 86 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 206 LCASGGKDGQAMLW 219
Score = 65 (27.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 95
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 86 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 206 LCASGGKDGQAMLW 219
Score = 65 (27.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 95
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 88 (36.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 24/64 (37%), Positives = 31/64 (48%)
Query: 222 WNSKEEAAVFEFCGHTTRTWNL--DNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDET 277
W+ KE A V +T + + D+ EC TL GH TV SL F E S D+
Sbjct: 143 WSPKENALVSASYDNTIKIYKEVDDDWECSHTLIGHESTVWSLSFHSSGELFVSCGDDKV 202
Query: 278 IKIW 281
+KIW
Sbjct: 203 LKIW 206
Score = 78 (32.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 25/99 (25%), Positives = 42/99 (42%)
Query: 68 RFLHSWVHSVDGDN-TTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRD 126
+++ W + D D T S+ T GH + + +V N L S S D + +W +
Sbjct: 20 QYIRIWAKNSDSDQWTCKSILT----EGHTRTIRSVAWSPCGNYLASCSFDATICIWSKK 75
Query: 127 SG--RCVNVITNGA-EIGCLISEGSWVFLGLPNAVKS-W 161
G C+ + E+ C+ S V+L + KS W
Sbjct: 76 DGDFECMATLEGHENEVKCVNWSSSGVYLASCSRDKSAW 114
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 100 (40.3 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 89 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 148
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 149 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 208
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 209 LCASGGKDGQAMLW 222
Score = 65 (27.9 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 62 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 98
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 96 (38.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 29/129 (22%), Positives = 52/129 (40%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIW-LYTHTKNNAELSSL 295
R W++ + +KGH T+ SL D + S S+D T+K+W L T T +
Sbjct: 316 RVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHK 375
Query: 296 FGM--LDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREV-EVDQIGPAGLFFPGDA 352
G+ + K F++G I+ ++ P + + + + G
Sbjct: 376 KGVRSMVIHEKEYSFATGAADNIKQWKCPDGSFIKNLSGHNSIINAMALNADNVLVSGGD 435
Query: 353 SGSVGVWKW 361
+GS+ W W
Sbjct: 436 NGSISFWDW 444
Score = 75 (31.5 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 60 SCVYGDKCRFLHSWVHSVDGDNTT-----NSLATLMKLNGHKKAVTNVGLPSGSNKLYSG 114
S + G + H ++ SV DN S + GH++ V +V L + L+SG
Sbjct: 250 SAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSG 309
Query: 115 SRDGRVSVWD 124
RD V VWD
Sbjct: 310 GRDNCVRVWD 319
Score = 63 (27.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 89 LMK-LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITN--GAEIGCLIS 145
LM+ ++GH V + + + +GS D + VWD SG +T A G +S
Sbjct: 199 LMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVS 258
Query: 146 EGS-WVF-LGLPNAVKSW 161
++F +G N V W
Sbjct: 259 SRHPYLFSVGEDNKVLCW 276
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 113 (44.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 40/134 (29%), Positives = 59/134 (44%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIW------LYTHT-K 287
T R W L + GH++ V S+ F + + S S D +IK+W YT T K
Sbjct: 86 TLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWNTLGDCKYTITEK 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRA-RIFSRREVEVDQIGPAG- 345
++E S PV+ SSG D ++++EL S KL+ I + I P G
Sbjct: 146 GHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINTVTISPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G+ +W
Sbjct: 206 LCASGGKDGTTMLW 219
Score = 50 (22.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 92 LNGHKKAVTNVGLP-SGSNKLYSGSRDGRVSVWD 124
L GH VT++ N L S SRD + +W+
Sbjct: 11 LEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWN 44
>UNIPROTKB|F1MRM3 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:DAAA02054389 IPI:IPI00867384 UniGene:Bt.9939
ProteinModelPortal:F1MRM3 Ensembl:ENSBTAT00000000891 Uniprot:F1MRM3
Length = 475
Score = 108 (43.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 33/130 (25%), Positives = 59/130 (45%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGM 298
W + + + T GH D V+ L F L+S+S D ++K+W + N+ + +LFG
Sbjct: 226 WEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVW---NVAENSYVETLFGH 282
Query: 299 LDAEA-------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGL--FFP 349
DA A + + + G+D +R++++P +F + +D I
Sbjct: 283 QDAVAALDALSRECCVTAGGRDGTVRVWKIPEES--QLVFYGHQGSIDSIQLINEEHMVS 340
Query: 350 GDASGSVGVW 359
G GSV +W
Sbjct: 341 GADDGSVALW 350
Score = 61 (26.5 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 87 ATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
A + L GH+ ++T + + ++S ++D + W +SGR ++VI
Sbjct: 137 ADIRILRGHQLSITCLVVTPDDLAIFSAAKDCTIIKWSVESGRKLHVI 184
Score = 49 (22.3 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT 135
GH V + + S L SG R + +W+ S C ++ T
Sbjct: 197 GHSTHVLCMAISSDGKYLASGDRSKLILIWEAQS--CQHLYT 236
>UNIPROTKB|G4MWF1 [details] [associations]
symbol:MGG_08345 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 EMBL:CM001232
KO:K03361 RefSeq:XP_003715718.1 EnsemblFungi:MGG_08345T0
GeneID:2678612 KEGG:mgr:MGG_08345 Uniprot:G4MWF1
Length = 1033
Score = 93 (37.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 23/86 (26%), Positives = 48/86 (55%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGM 298
+ W+L+ C+ TL+GHS V L DE L S++ D T++IW + K + L++
Sbjct: 875 KIWDLETGACLYTLEGHSLLVGLLDLRDERLVSAAADSTLRIWDPENGKCKSILTAHTAA 934
Query: 299 LDA---EAKPVLFSSGKDSAIRLYEL 321
+ +++ V+ SG + ++++++
Sbjct: 935 ITCFQHDSRKVI--SGSEKTVKMWDI 958
Score = 85 (35.0 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 28/92 (30%), Positives = 38/92 (41%)
Query: 53 CNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLY 112
C + D + G + +H + D T L KL GH+ V L N L
Sbjct: 659 CLQFDEDKIITGSDDQLIHVY------DTNTGKLR--QKLEGHEGGVW--ALQYEGNTLV 708
Query: 113 SGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCL 143
SGS D V VWD + G C V + + + CL
Sbjct: 709 SGSTDRSVRVWDIEKGLCTQVFYGHTSTVRCL 740
Score = 84 (34.6 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCV 131
L GH + V +V L N+ SGS D V +WD ++G C+
Sbjct: 846 LQGHSQKVYSVVLDHKRNRCISGSMDSLVKIWDLETGACL 885
Score = 84 (34.6 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEY--LFSSSLDETIKIW-LYT----HTKNN 289
+ R W + E + L+GHS V S++ + S S+D +KIW L T +T
Sbjct: 831 SVRVWRISTGEQLHWLQGHSQKVYSVVLDHKRNRCISGSMDSLVKIWDLETGACLYTLEG 890
Query: 290 AELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRA 328
L L G+LD + L S+ DS +R+++ + K ++
Sbjct: 891 HSL--LVGLLDLRDER-LVSAAADSTLRIWDPENGKCKS 926
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 93 (37.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNV-ITNGAEI-GCLISE 146
L KL HK ++T G + L S S+DG + +WD + +C+ I + E G + +
Sbjct: 156 LYKLRSHKDSITGFWC-QGEDWLISTSKDGMIKLWDLKTHQCIETHIAHTGECWGLAVKD 214
Query: 147 GSWVFLGLPNAVKSWR 162
+ G + VK W+
Sbjct: 215 DLLITTGTDSQVKIWK 230
Score = 91 (37.1 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 26/88 (29%), Positives = 47/88 (53%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFW---DEYLFSSSLDETIKIW-LYTHT---KNNAELS 293
W+L + L+ H D++T FW +++L S+S D IK+W L TH + A
Sbjct: 148 WDLVGEVGLYKLRSHKDSITG--FWCQGEDWLISTSKDGMIKLWDLKTHQCIETHIAHTG 205
Query: 294 SLFGMLDAEAKPVLFSSGKDSAIRLYEL 321
+G+ A +L ++G DS +++++L
Sbjct: 206 ECWGL--AVKDDLLITTGTDSQVKIWKL 231
Score = 86 (35.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 85 SLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
S L+ NGHK A+T + +L SGS+D + VWD
Sbjct: 110 SKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWD 149
Score = 84 (34.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 30/133 (22%), Positives = 62/133 (46%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSL-LFWD-EYLFSSSLDETIKIWLYT----HTKNN 289
+T + + LD+++ +L GH V S+ + +D + + +SS D+ IKIW H
Sbjct: 553 NTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLF 612
Query: 290 AELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRR-EVEVDQIGPAGLFF 348
A S+ + FS KD+ ++ ++ F+ ++++ + EV + G F
Sbjct: 613 AHQDSIMNVKFLPQSHNFFSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFV 672
Query: 349 PGDASG-SVGVWK 360
+ S+ +W+
Sbjct: 673 VSSSHDHSIRIWE 685
Score = 74 (31.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 213 SLSSSNDTRWNSK--EEAAVFEFCGH--TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE- 267
SL + D+ N K ++ F C + W+ + EC+Q L H V +L +
Sbjct: 610 SLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDG 669
Query: 268 -YLFSSSLDETIKIW 281
++ SSS D +I+IW
Sbjct: 670 GFVVSSSHDHSIRIW 684
Score = 41 (19.5 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 9/35 (25%), Positives = 12/35 (34%)
Query: 210 WFCSLSSSNDTR-WNSKEEAAVFEFCGHTTRTWNL 243
W S S + W+ K + HT W L
Sbjct: 176 WLISTSKDGMIKLWDLKTHQCIETHIAHTGECWGL 210
>UNIPROTKB|I3LQS7 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:FP102591 Ensembl:ENSSSCT00000032341 Uniprot:I3LQS7
Length = 478
Score = 106 (42.4 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGM 298
W + + T GH D V+ L F L+S+S D ++K+W + N+ + +LFG
Sbjct: 229 WEAQSCRHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVW---NVAENSYVETLFGH 285
Query: 299 LDAEA-------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGL--FFP 349
DA A + + + G+D +R++++P +F + +D I
Sbjct: 286 QDAVAALDALSRECCVTAGGRDGTVRVWKIPEES--QLVFYGHQGSIDSIQLINEEHMVS 343
Query: 350 GDASGSVGVW 359
G GSV +W
Sbjct: 344 GADDGSVALW 353
Score = 63 (27.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 87 ATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITN---GAE 139
A + L GH+ ++T + + ++S ++D + W +SGR ++VI GAE
Sbjct: 140 ADIRILRGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVESGRKLHVIPRAKKGAE 195
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 96 (38.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/84 (33%), Positives = 40/84 (47%)
Query: 204 SIRAPLWFCSL----SSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTV 259
SI P SL S R N+ EE V + R W+L+ + ++TL GH +
Sbjct: 49 SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANI 108
Query: 260 TSLLF--WDEYLFSSSLDETIKIW 281
SL F + E++ S S D IK+W
Sbjct: 109 CSLDFHPYGEFVASGSQDTNIKLW 132
Score = 82 (33.9 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 64 GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
GD CR ++ W S++ N +M L GH V +V L + + +GS+ G + VW
Sbjct: 40 GDDCR-VNLW--SINKPNC------IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 124 DRDSGRCVNVITNGAEIGCLIS---EGSWVFLGLPNA-VKSW 161
D ++ + + + C + G +V G + +K W
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Score = 78 (32.5 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSSLF 296
+ W++ CV +GHS V L F + +L S++ D T+K+W T K +E
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
Query: 297 GMLDA-EAKP--VLFSSG 311
G ++ E P L +SG
Sbjct: 190 GPVNVVEFHPNEYLLASG 207
Score = 57 (25.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 83 TNSLATLMKLNGHKKAVTNVGLPSGSNKLYS-GSRDGRVSVWDRDSGRCVNVIT 135
T + L ++ H V+++ L S +L + G D RV++W + C+ +T
Sbjct: 7 TKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 92 (37.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 356 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 413
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 414 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 453
Score = 88 (36.0 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 369 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 413
Score = 79 (32.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAE 291
C++TL HS V L F DE+ + SSS D+TI IW + + N +
Sbjct: 469 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVSTNGQ 512
Score = 71 (30.1 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 110 KLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
K+ SG RD + +WD+ + C+ ++T + + CL + + G ++ V+ W
Sbjct: 237 KIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVW 290
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 95 (38.5 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
+ W+L + T++GH+D+VT L E YL S+++D T++IW
Sbjct: 245 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIW 289
Score = 72 (30.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 68 RFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDS 127
R + W +V GD ++ ATL GH AV + + + L+S S D V+VWD ++
Sbjct: 115 RLILLW--NVYGD--CDNYATL---KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 167
Query: 128 GRCV 131
G V
Sbjct: 168 GERV 171
Score = 62 (26.9 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 91 KLNGHKKAVTNVGLPS--GSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI-GCLISEG 147
+L GH V N P+ G + +GS DG V +WD V N ++ ++
Sbjct: 173 RLKGHTSFV-NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDT 231
Query: 148 SWVFL--GLPNAVKSW 161
S + G+ N +K W
Sbjct: 232 SDQIISGGIDNDIKVW 247
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 105 (42.0 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 35/153 (22%), Positives = 69/153 (45%)
Query: 218 NDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLD 275
+D W+ + T + W++++ + V+TLKGH + V + F + S S D
Sbjct: 92 SDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFD 151
Query: 276 ETIKIW-LYTH--TKN-NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIF 331
E ++IW + T TK +A + G+ ++ S D +R+++ + +L I
Sbjct: 152 ENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIS 211
Query: 332 SR--REVEVDQIGPAGLF-FPGDASGSVGVWKW 361
+ +EV + P G F G ++ +W +
Sbjct: 212 TEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSY 244
Score = 59 (25.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSW 149
L GH K++++V L S S D + +W G+ + G + G IS+ +W
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTL-EGHKEG--ISDIAW 96
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 94 (38.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
+ W+L + T++GH+D+VT L E YL S+++D T+++W
Sbjct: 218 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
Score = 72 (30.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 68 RFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDS 127
R + W +V GD ++ ATL GH AV + + + L+S S D V+VWD ++
Sbjct: 88 RLILLW--NVYGD--CDNYATL---KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 140
Query: 128 GRCV 131
G V
Sbjct: 141 GERV 144
Score = 61 (26.5 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 91 KLNGHKKAVTNVGLPS--GSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI-GCLISEG 147
+L GH V N P+ G + +GS DG V +WD + N ++ ++
Sbjct: 146 RLKGHTSFV-NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDT 204
Query: 148 SWVFL--GLPNAVKSW 161
S + G+ N +K W
Sbjct: 205 SDQIISGGIDNDIKVW 220
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 94 (38.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
+ W+L + T++GH+D+VT L E YL S+++D T+++W
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 72 (30.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 68 RFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDS 127
R + W +V GD ++ ATL GH AV + + + L+S S D V+VWD ++
Sbjct: 89 RLILLW--NVYGD--CDNYATL---KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Query: 128 GRCV 131
G V
Sbjct: 142 GERV 145
Score = 62 (26.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 91 KLNGHKKAVTNVGLPS--GSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI-GCLISEG 147
+L GH V N P+ G + +GS DG V +WD V N ++ ++
Sbjct: 147 RLKGHTSFV-NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDT 205
Query: 148 SWVFL--GLPNAVKSW 161
S + G+ N +K W
Sbjct: 206 SDQIISGGIDNDIKVW 221
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 94 (38.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
+ W+L + T++GH+D+VT L E YL S+++D T+++W
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 72 (30.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 68 RFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDS 127
R + W +V GD ++ ATL GH AV + + + L+S S D V+VWD ++
Sbjct: 89 RLILLW--NVYGD--CDNYATL---KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Query: 128 GRCV 131
G V
Sbjct: 142 GERV 145
Score = 61 (26.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 91 KLNGHKKAVTNVGLPS--GSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI-GCLISEG 147
+L GH V N P+ G + +GS DG V +WD + N ++ ++
Sbjct: 147 RLKGHTSFV-NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDT 205
Query: 148 SWVFL--GLPNAVKSW 161
S + G+ N +K W
Sbjct: 206 SDQIISGGIDNDIKVW 221
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 94 (38.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
+ W+L + T++GH+D+VT L E YL S+++D T+++W
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 72 (30.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 68 RFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDS 127
R + W +V GD ++ ATL GH AV + + + L+S S D V+VWD ++
Sbjct: 89 RLILLW--NVYGD--CDNYATL---KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Query: 128 GRCV 131
G V
Sbjct: 142 GERV 145
Score = 61 (26.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 91 KLNGHKKAVTNVGLPS--GSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI-GCLISEG 147
+L GH V N P+ G + +GS DG V +WD + N ++ ++
Sbjct: 147 RLKGHTSFV-NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDT 205
Query: 148 SWVFL--GLPNAVKSW 161
S + G+ N +K W
Sbjct: 206 SDQIISGGIDNDIKVW 221
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 94 (38.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
+ W+L + T++GH+D+VT L E YL S+++D T+++W
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 72 (30.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 68 RFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDS 127
R + W +V GD ++ ATL GH AV + + + L+S S D V+VWD ++
Sbjct: 89 RLILLW--NVYGD--CDNYATL---KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Query: 128 GRCV 131
G V
Sbjct: 142 GERV 145
Score = 61 (26.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 91 KLNGHKKAVTNVGLPS--GSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI-GCLISEG 147
+L GH V N P+ G + +GS DG V +WD + N ++ ++
Sbjct: 147 RLKGHTSFV-NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDT 205
Query: 148 SWVFL--GLPNAVKSW 161
S + G+ N +K W
Sbjct: 206 SDQIISGGIDNDIKVW 221
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 107 (42.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 32/129 (24%), Positives = 49/129 (37%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLDETIKIWLYTHTKNNAELS--- 293
R W++ + V L GH TV SL +D + + S+D TI++W K L+
Sbjct: 272 RVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHK 331
Query: 294 SLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRRE-VEVDQIGPAGLFFPGDA 352
L F+SG I+ ++ P V I + F G
Sbjct: 332 KTVRALSLHPDEFTFASGSSDNIKHWKFPEGAFMGNFEGHNAIVNTLSINSDNVMFSGAD 391
Query: 353 SGSVGVWKW 361
+GS+ W W
Sbjct: 392 NGSMCFWDW 400
Score = 61 (26.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 88 TLMK-LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNG-AEI-GCLI 144
TLM+ ++GH V V + G+ +G+ D + +WD SG +T A + G +
Sbjct: 154 TLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAV 213
Query: 145 S-EGSWVF-LGLPNAVKSW 161
S ++F G VK W
Sbjct: 214 SPRHPYLFSCGEDKMVKCW 232
Score = 52 (23.4 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 71 HSWVHSVDGDNTTN--SLAT-LMKLN--GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDR 125
+ W + GD T LA+ ++KL GH V + + L+S D V WD
Sbjct: 175 NQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDL 234
Query: 126 DSGRCV 131
++ + +
Sbjct: 235 ETNKVI 240
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 112 (44.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIWLYTHTKNNAELSS-L 295
R W++ + L GH+ TV+ L+ D + + SLD T+++W K L+
Sbjct: 310 RVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHK 369
Query: 296 FGMLDAEAKPV--LFSSGKDSAIRLYELPSFKLRARIFSRREV-EVDQIGPAGLFFPGDA 352
G+ P F+SG +I+ ++ P + + +FF G
Sbjct: 370 KGVRALATHPTEFTFASGSAGSIKQWKCPEGAFMQNFEGHNSIINTLSVNDQNVFFSGAD 429
Query: 353 SGSVGVWKWLLAEQ-QKMET 371
+GS+ W W + Q ++T
Sbjct: 430 NGSMSFWDWKTGHRFQSLDT 449
Score = 56 (24.8 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 71 HSWVHSVDGDNTTN--SLAT---LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDR 125
+ W S GD T LA+ + L GH V + + L+S + D V WD
Sbjct: 213 NKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHPYLFSCAEDKMVKCWDL 272
Query: 126 DSGRCV 131
++ + +
Sbjct: 273 ETNKVI 278
Score = 54 (24.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 89 LMK-LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGR 129
LM+ ++GH V + + + SG+ D + +WD SGR
Sbjct: 193 LMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGR 234
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 98 (39.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 34/134 (25%), Positives = 57/134 (42%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 86 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+++E S + P++ S G D + ++ L + KL+ I + + P G
Sbjct: 146 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 206 LCASGGKDGQAMLW 219
Score = 65 (27.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SGS DG + +WD +G
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 95
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 100 (40.3 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITN--GAEIG-CLIS 145
++K H A++ + S ++ +G+ DG++ VWD +SG C+ T A G C
Sbjct: 332 VLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSK 391
Query: 146 EGSWVFLG-LPNAVKSW 161
G+ +F L +V++W
Sbjct: 392 RGNVLFSSSLDGSVRAW 408
Score = 74 (31.1 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
W++ + ++TL GH V+SL F L S S D+T++IW
Sbjct: 452 WSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIW 494
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 94 (38.1 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
+ W+L + T++GH+D+VT L E YL S+++D T+++W
Sbjct: 218 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
Score = 72 (30.4 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 68 RFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDS 127
R + W +V GD ++ ATL GH AV + + + L+S S D V+VWD ++
Sbjct: 88 RLILLW--NVYGD--CDNYATL---KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 140
Query: 128 GRCV 131
G V
Sbjct: 141 GERV 144
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 94 (38.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 37/143 (25%), Positives = 62/143 (43%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW------LYTHTKNNA 290
R W+L E + GH+ V S+ F + + S+S D TIK+W YT ++ +
Sbjct: 88 RLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDG 147
Query: 291 --ELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRRE-VEVDQIGPAG-L 346
E S P + S+ D ++++ L + KLR + + + P G L
Sbjct: 148 HKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSL 207
Query: 347 FFPGDASGSVGVWKWLLAEQQKM 369
G G + +W LAE +K+
Sbjct: 208 CASGGKDGVILLWD--LAEGKKL 228
Score = 69 (29.3 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 58 SDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRD 117
SD V + + + W + D+ + +A +L GH V +V L S SGS D
Sbjct: 28 SDIIVTASRDKSIILW--KLTKDDKSYGVAQ-RRLTGHSHFVEDVVLSSDGQFALSGSWD 84
Query: 118 GRVSVWDRDSG 128
G + +WD +G
Sbjct: 85 GELRLWDLATG 95
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 96 (38.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/84 (33%), Positives = 40/84 (47%)
Query: 204 SIRAPLWFCSL----SSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTV 259
SI P SL S R N+ EE V + R W+L+ + ++TL GH +
Sbjct: 53 SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANI 112
Query: 260 TSLLF--WDEYLFSSSLDETIKIW 281
SL F + E++ S S D IK+W
Sbjct: 113 CSLDFHPYGEFVASGSQDTNIKLW 136
Score = 82 (33.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 64 GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
GD CR ++ W S++ N +M L GH V +V L + + +GS+ G + VW
Sbjct: 44 GDDCR-VNLW--SINKPNC------IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 94
Query: 124 DRDSGRCVNVITNGAEIGCLIS---EGSWVFLGLPNA-VKSW 161
D ++ + + + C + G +V G + +K W
Sbjct: 95 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 136
Score = 75 (31.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAE 291
+ W++ CV +GHS V L F + +L S++ D T+K+W T K +E
Sbjct: 134 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 188
Score = 57 (25.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/52 (25%), Positives = 28/52 (53%)
Query: 85 SLATLMKLNGHKKAVTNVGLPSGSNKLYS-GSRDGRVSVWDRDSGRCVNVIT 135
++A + ++ H V+++ L S +L + G D RV++W + C+ +T
Sbjct: 13 AVAAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 64
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 84 (34.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 32/136 (23%), Positives = 63/136 (46%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWD---EYLFSSSLDETIKIW-------LYTHTKN 288
R W+ CV+TL + S + + +++ +LD T+++W L T+T +
Sbjct: 180 RIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH 239
Query: 289 -NAE--LSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVD-QIGPA 344
NA+ +SS F + + + + S +D+ + ++EL S KL ++ E ++ P
Sbjct: 240 VNAQYCISSAFSVTNGKR---IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPT 296
Query: 345 -GLFFPGDASGSVGVW 359
L G +V +W
Sbjct: 297 ENLIASGSLDKTVRIW 312
Score = 79 (32.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/85 (34%), Positives = 39/85 (45%)
Query: 55 NWISDSCVYGDKCRFLHSWVHSVDGDNTTN----SLATLMK-LNGHKKAVTNVGLPSGSN 109
N ISD D RF+ V + D D T +L+K L GH V SN
Sbjct: 72 NGISDVAFSSD-ARFI---VSASD-DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN 126
Query: 110 KLYSGSRDGRVSVWDRDSGRCVNVI 134
+ SGS D V +WD +G+C+ V+
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVL 151
>POMBASE|SPBC1718.01 [details] [associations]
symbol:pop1 "cullin 1 adaptor protein Pop1" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IGI] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008054 "cyclin catabolic process"
evidence=IMP] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPBC1718.01 GO:GO:0005634 GO:GO:0007346 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0008054 GO:GO:0006995 GO:GO:0000747 KO:K03361
OrthoDB:EOG4B2X5M EMBL:Y08391 PIR:T45136 PIR:T50329
RefSeq:XP_001713146.1 ProteinModelPortal:P87060 IntAct:P87060
STRING:P87060 EnsemblFungi:SPBC1718.01.1 GeneID:2540511
KEGG:spo:SPBC1718.01 OMA:NRCISAS NextBio:20801638 Uniprot:P87060
Length = 775
Score = 107 (42.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 33/94 (35%), Positives = 53/94 (56%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSL--DETIKIW-LYTHTKNN---AEL 292
R WNL++ E +QTL GHS+ V+ + F L S+S D ++++W L T + + L
Sbjct: 642 RIWNLESGELLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRVWDLNTGSCRDILKCPL 701
Query: 293 SSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKL 326
+F D E+K V SG S ++L+++ S KL
Sbjct: 702 GHIFFQHD-ESKVV---SGSHSTLQLWDIRSGKL 731
Score = 64 (27.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 82 TTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
TTN + L GH +V V + + S S DG + VW +G C++V+
Sbjct: 564 TTNPFY-IRTLRGHTDSVREVACLG--DLIVSASYDGTLRVWKASTGVCLHVL 613
Score = 57 (25.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 111 LYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCL-ISEGS 148
L +GS D V VWD +G C V + + I C+ I +G+
Sbjct: 459 LVTGSTDRTVRVWDLRTGECKQVFYGHTSTIRCIKIVQGN 498
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 98 (39.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ +CV+TL GH V+ + F + L SSS D+TIK+W
Sbjct: 171 TIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVW 217
Score = 67 (28.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH+ + +V + + S S D + VWD +SG
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESG 138
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 92 (37.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 322 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 379
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 380 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 419
Score = 88 (36.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 335 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 379
Score = 83 (34.3 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
+T R W+++ C++ L+GH + V + F ++ + S + D IK+W
Sbjct: 374 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 419
Score = 76 (31.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 109 NKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
+K+ SG RD + +WD+ S C+ V+T + + CL + + G ++ V+ W
Sbjct: 202 DKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 256
Score = 75 (31.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAE 291
C++TL HS V L F DE+ + SSS D+TI IW + + +A+
Sbjct: 435 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVPPSAQ 478
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 93 (37.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W++D LE V+TL GH + L + + S S D TI++W
Sbjct: 366 TIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLW 410
Score = 77 (32.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 74 VHSVDGDNTTNSLATLMKLNGHKKAVTNVG-LPSGSNKLYSGSRDGRVSVWDRDSGRCVN 132
+H++D +N + ++N + V L +K+ SG RD + +WDR C
Sbjct: 198 IHNID-NNWKRGNYKMTRINCQSENSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSR 256
Query: 133 VIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
+++ + + CL + + G +A V+ W
Sbjct: 257 ILSGHTGSVLCLQYDNRVIISGSSDATVRVW 287
Score = 73 (30.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
L+GH +V + L + + SGS D V VWD ++G C+ + + E
Sbjct: 258 LSGHTGSV--LCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCE 303
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 93 (37.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W++D LE V+TL GH + L + + S S D TI++W
Sbjct: 366 TIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLW 410
Score = 77 (32.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 74 VHSVDGDNTTNSLATLMKLNGHKKAVTNVG-LPSGSNKLYSGSRDGRVSVWDRDSGRCVN 132
+H++D +N + ++N + V L +K+ SG RD + +WDR C
Sbjct: 198 IHNID-NNWKRGNYKMTRINCQSENSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSR 256
Query: 133 VIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
+++ + + CL + + G +A V+ W
Sbjct: 257 ILSGHTGSVLCLQYDNRVIISGSSDATVRVW 287
Score = 73 (30.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
L+GH +V + L + + SGS D V VWD ++G C+ + + E
Sbjct: 258 LSGHTGSV--LCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCE 303
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 92 (37.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 339 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 396
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 397 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 436
Score = 88 (36.0 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 352 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 396
Score = 75 (31.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAE 291
C++TL HS V L F DE+ + SSS D+TI IW + + +A+
Sbjct: 452 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVPPSAQ 495
Score = 74 (31.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 110 KLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
K+ SG RD + +WD+ S C+ V+T + + CL + + G ++ V+ W
Sbjct: 220 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 273
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 92 (37.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 339 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 396
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 397 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 436
Score = 88 (36.0 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 352 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 396
Score = 75 (31.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAE 291
C++TL HS V L F DE+ + SSS D+TI IW + + +A+
Sbjct: 452 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVPPSAQ 495
Score = 74 (31.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 110 KLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
K+ SG RD + +WD+ S C+ V+T + + CL + + G ++ V+ W
Sbjct: 220 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 273
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 92 (37.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 356 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 413
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 414 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 453
Score = 88 (36.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 369 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 413
Score = 76 (31.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 109 NKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
+K+ SG RD + +WD+ S C+ V+T + + CL + + G ++ V+ W
Sbjct: 236 DKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 290
Score = 75 (31.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAE 291
C++TL HS V L F DE+ + SSS D+TI IW + + +A+
Sbjct: 469 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVPPSAQ 512
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 87 (35.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWV 150
L GH V + + S N SGSRD + +WD +G C +V+ + A + CL G V
Sbjct: 328 LRGHTSTVRCLKM-SDKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVHGDIV 386
Query: 151 FLG 153
G
Sbjct: 387 VSG 389
Score = 82 (33.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSS-- 294
+ R W+L + + L H ++VTSL F + + S D +K+W + ELS+
Sbjct: 474 SVRVWSLTRMAPIHRLAAHDNSVTSLQFDNNRIVSGGSDGRVKVWCLRTGQLLRELSTPS 533
Query: 295 --LFGMLDAEAKPVLFSS 310
++ + E K V+ SS
Sbjct: 534 DTVWRVTFEEEKAVIMSS 551
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 92 (37.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 358 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 415
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 416 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 455
Score = 88 (36.0 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 371 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 415
Score = 75 (31.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAE 291
C++TL HS V L F DE+ + SSS D+TI IW + + +A+
Sbjct: 471 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVPPSAQ 514
Score = 74 (31.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 110 KLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
K+ SG RD + +WD+ S C+ V+T + + CL + + G ++ V+ W
Sbjct: 239 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 292
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 92 (37.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 359 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 416
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 417 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 456
Score = 88 (36.0 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 372 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 416
Score = 75 (31.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAE 291
C++TL HS V L F DE+ + SSS D+TI IW + + +A+
Sbjct: 472 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVPPSAQ 515
Score = 74 (31.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 110 KLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
K+ SG RD + +WD+ S C+ V+T + + CL + + G ++ V+ W
Sbjct: 240 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 293
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 92 (37.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 371 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 428
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 429 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 468
Score = 88 (36.0 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 384 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 428
Score = 76 (31.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 109 NKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
+K+ SG RD + +WD+ S C+ V+T + + CL + + G ++ V+ W
Sbjct: 251 DKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 305
Score = 75 (31.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAE 291
C++TL HS V L F DE+ + SSS D+TI IW + + +A+
Sbjct: 484 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVPPSAQ 527
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 92 (37.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 371 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 428
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 429 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 468
Score = 88 (36.0 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 384 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 428
Score = 75 (31.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAE 291
C++TL HS V L F DE+ + SSS D+TI IW + + +A+
Sbjct: 484 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVPPSAQ 527
Score = 74 (31.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 110 KLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
K+ SG RD + +WD+ S C+ V+T + + CL + + G ++ V+ W
Sbjct: 252 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 305
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 92 (37.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 371 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 428
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 429 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 468
Score = 88 (36.0 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 384 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 428
Score = 75 (31.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAE 291
C++TL HS V L F DE+ + SSS D+TI IW + + +A+
Sbjct: 484 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVPPSAQ 527
Score = 74 (31.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 110 KLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
K+ SG RD + +WD+ S C+ V+T + + CL + + G ++ V+ W
Sbjct: 252 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 305
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 96 (38.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/132 (21%), Positives = 55/132 (41%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD---EYLFSSSLDETIKIWLYTHTKNNAELS 293
T R W++ V TL GH++TV ++ + + S D TI++W K A L+
Sbjct: 315 TARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLT 374
Query: 294 SLFGMLDA---EAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREV-EVDQIGPAGLFFP 349
+ + A + F+SG I+ ++ P + + + G+
Sbjct: 375 NHKKSVRALVLHPRQYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLAVNSDGVLVS 434
Query: 350 GDASGSVGVWKW 361
G +G++ +W W
Sbjct: 435 GADNGTIHMWDW 446
Score = 70 (29.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLISEGS- 148
++GH V ++ + G+ +GS D + +WD SG+ +T G +S S
Sbjct: 204 ISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSP 263
Query: 149 WVF-LGLPNAVKSW 161
++F G VK W
Sbjct: 264 YLFSCGEDKQVKCW 277
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 96 (38.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEY--LFSSSLDETIKIWLYTHTKNNAELS 293
+T W++ ++C+ L GH+D + S ++ E S+S+D TI+IW + NN E S
Sbjct: 550 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENIWNNGECS 609
Score = 74 (31.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCL 143
L++L+GH V + G L SGS D V VWD G C +V + + + CL
Sbjct: 415 LLQLSGHDGGVWALKYAHGGI-LVSGSTDRTVRVWDIKKGCCTHVFKGHNSTVRCL 469
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 31/101 (30%), Positives = 58/101 (57%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELS 293
+T + W+LD +C+ TL GH D V ++ F E ++ S+S D+TI+IW + +N E++
Sbjct: 75 YTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNW---QNRKEIA 131
Query: 294 SLFG----MLDAEAKP---VLFSSGKDSAIRLYELPSFKLR 327
L G ++ A+ P ++ S+ D IR++++ + R
Sbjct: 132 CLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKR 172
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 101 (40.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 44/168 (26%), Positives = 71/168 (42%)
Query: 215 SSSNDTR---WNSKEEAAVFEFCGHTTRT-----------WNLDNLECVQTLKGHSDTVT 260
S S+DT WNS ++ GH+ R WN T++GHSD V
Sbjct: 100 SGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVL 159
Query: 261 SLLFWDE--YLFSSSLDETIKIWLYT-----HTKNNAELSSLFGMLDAEAKPVLFSSGKD 313
S+ F + L S S ++TIK+W HT L + + + +L S D
Sbjct: 160 SVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGR-LLASGSND 218
Query: 314 SAIRLYELPSFKLRARIFSR-REVEVDQIGPAG-LFFPGDASGSVGVW 359
+ I+L++ PS L+ + ++E P G L G + ++ +W
Sbjct: 219 ATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLW 266
Score = 62 (26.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L L GH + V L SGS D + +WD SG
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASG 73
Score = 58 (25.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDS 127
L GH +V +V L SGS D + +W+ S
Sbjct: 79 LEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSAS 114
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 93 (37.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + WN E V+TL GH + L + D + S S D TI++W
Sbjct: 348 TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 392
Score = 92 (37.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 335 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 392
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 393 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 432
Score = 72 (30.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 95 HKKAVTNVG---LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWV 150
H ++ T+ G L K+ SG RD + +WD+ + C ++T + + CL + +
Sbjct: 198 HCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVI 257
Query: 151 FLGLPNA-VKSW 161
G ++ V+ W
Sbjct: 258 ITGSSDSTVRVW 269
Score = 71 (30.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIW 281
C++TL HS V L F DE+ + SSS D+TI IW
Sbjct: 448 CLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIW 481
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 93 (37.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + WN E V+TL GH + L + D + S S D TI++W
Sbjct: 348 TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 392
Score = 92 (37.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 335 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 392
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 393 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 432
Score = 72 (30.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 95 HKKAVTNVG---LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWV 150
H ++ T+ G L K+ SG RD + +WD+ + C ++T + + CL + +
Sbjct: 198 HCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVI 257
Query: 151 FLGLPNA-VKSW 161
G ++ V+ W
Sbjct: 258 ITGSSDSTVRVW 269
Score = 71 (30.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIW 281
C++TL HS V L F DE+ + SSS D+TI IW
Sbjct: 448 CLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIW 481
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 93 (37.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + WN E V+TL GH + L + D + S S D TI++W
Sbjct: 406 TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 450
Score = 92 (37.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 393 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 450
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 451 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 490
Score = 73 (30.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 95 HKKAVTNVG---LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWV 150
H ++ T+ G L K+ SG RD + +WD+++ C ++T + + CL + +
Sbjct: 256 HCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVI 315
Query: 151 FLGLPNA-VKSW 161
G ++ V+ W
Sbjct: 316 ITGSSDSTVRVW 327
Score = 71 (30.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIW 281
C++TL HS V L F DE+ + SSS D+TI IW
Sbjct: 506 CLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIW 539
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 126 (49.4 bits), Expect = 0.00021, P = 0.00021
Identities = 79/319 (24%), Positives = 119/319 (37%)
Query: 80 DNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT---- 135
D T L L L+GH V ++ L SGS D + +WD +G +
Sbjct: 778 DPATGEL--LQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPH 835
Query: 136 ---------NGAEIGCLISEGS---W-VFLG-LPNAVKSWRXXXXXXXXXXXXXXXXXXG 181
+G E+ + + W + G L + S
Sbjct: 836 SIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDS-HSQSVRSVAFSPDGKLLASS 894
Query: 182 SEGGVISVWKGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTW 241
S I VW +Q R+ W S++ S D K+ A+ E +T + W
Sbjct: 895 SLDSTIKVWNPA--TGELQQSLEGRSG-WVKSVAFSPD----GKKLASGSE--KNTVKLW 945
Query: 242 NLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSSLFGML 299
N E +QTL+GHS +V S+ F + L SSS D TIK+W T EL F
Sbjct: 946 NPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNST----TGELQQTFKGH 1001
Query: 300 DAEAKPVLFS-SGK-------DSAIRLYELPSFKLRARIFSR-REVEVDQIGPAGLFFPG 350
D + V FS GK D+ I+L++L + +L+ + R V P
Sbjct: 1002 DLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLAS 1061
Query: 351 DASGS-VGVWKWLLAEQQK 368
+ S + +W E Q+
Sbjct: 1062 SSLDSTIKLWDSATGELQR 1080
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 92 (37.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 344 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 401
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 402 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 441
Score = 88 (36.0 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 357 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 401
Score = 74 (31.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 110 KLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSW 161
K+ SG RD + +WD+ S C+ V+T + + CL + + G ++ V+ W
Sbjct: 225 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 278
Score = 73 (30.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNA 290
C++TL HS V L F DE+ + SSS D+TI IW + + +A
Sbjct: 457 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVPPSA 499
>MGI|MGI:2384313 [details] [associations]
symbol:Rrp9 "RRP9, small subunit (SSU) processome component,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2384313 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732
KO:K14793 CTD:9136 HOVERGEN:HBG079296 OMA:AAKDCTI OrthoDB:EOG4XKV6X
EMBL:AF368232 EMBL:AF368234 EMBL:AK076113 EMBL:BC014703
IPI:IPI00128256 RefSeq:NP_663595.1 UniGene:Mm.239997
ProteinModelPortal:Q91WM3 SMR:Q91WM3 STRING:Q91WM3
PhosphoSite:Q91WM3 PaxDb:Q91WM3 PRIDE:Q91WM3
Ensembl:ENSMUST00000047721 GeneID:27966 KEGG:mmu:27966
UCSC:uc009rkb.1 InParanoid:Q91WM3 NextBio:306456 Bgee:Q91WM3
Genevestigator:Q91WM3 GermOnline:ENSMUSG00000041506 Uniprot:Q91WM3
Length = 475
Score = 105 (42.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 33/130 (25%), Positives = 59/130 (45%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGM 298
W + + + T GH D V+ L F L+S+S D ++K+W + N+ + +LFG
Sbjct: 226 WEAQSCQHLYTFTGHRDAVSGLAFRKGTHQLYSTSHDRSVKVW---NAAENSYVETLFGH 282
Query: 299 LDAEA-------KPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGL--FFP 349
DA A + + + G+D +R++++P +F + +D I
Sbjct: 283 QDAVAALDALSRECCVTAGGRDGTVRVWKIPEES--QLVFYGHQGSIDCIHLINEEHMVS 340
Query: 350 GDASGSVGVW 359
G GSV +W
Sbjct: 341 GADDGSVALW 350
Score = 58 (25.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GH+ ++T + + ++S ++D + W ++GR ++VI
Sbjct: 142 LRGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVETGRKLHVI 184
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 85 (35.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSSLF 296
+ W++ C+ K H+ V L F + +L S++ D T+K+W T K E + +
Sbjct: 130 KLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 189
Query: 297 GMLDA-EAKPV---LFSSGKDSAIRLYELPSFKLRARIFSRRE-VEVDQIGPAGLFFPGD 351
G ++ E P L S IR ++L F + + I V P G G
Sbjct: 190 GPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGG 249
Query: 352 ASGSVGVWKW 361
S+ V+ W
Sbjct: 250 FQDSLRVYGW 259
Score = 83 (34.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/102 (25%), Positives = 47/102 (46%)
Query: 64 GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
GD CR ++ W SV+ N +M L GH + ++ + + + +GS+ G + VW
Sbjct: 40 GDDCR-VNVW--SVNKPNC------VMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVW 90
Query: 124 DRDSGRCVNVITNGAEIGCLIS---EGSWVFLG-LPNAVKSW 161
D ++ + + + C + GS+V G L +K W
Sbjct: 91 DLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 132
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 87 (35.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 239 RTWNLDNLEC-VQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW-LYTHTKNNAELSS 294
R W++ N E + TL H DT+TS + YL S+S+D + KIW + + N + +
Sbjct: 214 RVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKT 273
Query: 295 LFGMLDAEAKPVLFSS 310
G + K ++ SS
Sbjct: 274 FNGAQNNFEKNLIKSS 289
Score = 74 (31.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L GHK + + + SN++Y+ D + VWD + G + I
Sbjct: 101 LKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRI 143
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 92 (37.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 352 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 409
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 410 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 449
Score = 88 (36.0 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + W+ E V+TL GH + L + D + S S D TI++W
Sbjct: 365 TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 409
Score = 73 (30.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNA 290
C++TL HS V L F DE+ + SSS D+TI IW + + +A
Sbjct: 465 CLRTLVEHSGRVFRLQF-DEFQIISSSHDDTILIWDFLNVPPSA 507
Score = 71 (30.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 110 KLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCL 143
K+ SG RD + +WD+ S C+ V+T + + CL
Sbjct: 232 KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCL 266
>TAIR|locus:2092722 [details] [associations]
symbol:LST8-1 "AT3G18140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005768 "endosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0048571
"long-day photoperiodism" evidence=IMP] [GO:1900088 "regulation of
inositol biosynthetic process" evidence=IMP] [GO:1900091
"regulation of raffinose biosynthetic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005768 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB020749 HSSP:P16649 GO:GO:0048571 OMA:NNKGNCY
EMBL:AY087463 EMBL:BT002312 IPI:IPI00542303 RefSeq:NP_188442.1
UniGene:At.6055 ProteinModelPortal:Q9LV27 SMR:Q9LV27 IntAct:Q9LV27
STRING:Q9LV27 PRIDE:Q9LV27 EnsemblPlants:AT3G18140.1 GeneID:821339
KEGG:ath:AT3G18140 TAIR:At3g18140 InParanoid:Q9LV27
PhylomeDB:Q9LV27 ProtClustDB:CLSN2683726 Genevestigator:Q9LV27
GO:GO:1900088 GO:GO:1900091 Uniprot:Q9LV27
Length = 305
Score = 86 (35.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 80 DNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
D +NS +M + H V VG + +YSGS DG V +WD + C + A
Sbjct: 62 DVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAA 121
Query: 140 IGCLI 144
+ ++
Sbjct: 122 VNTVV 126
Score = 73 (30.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFW-D-EYLFSSSLDETIKIW 281
T + WN+D + + L GH V +F D E+L ++S D T ++W
Sbjct: 234 TVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLW 280
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 91 (37.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/103 (23%), Positives = 49/103 (47%)
Query: 181 GSEGGVISVWKGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRT 240
GS+ G + +W ++ AS+ F + +N + + + +
Sbjct: 160 GSDDGTVKLWD-------IRKKASVHT---FQNTYQVLSVTFNDTSDQIISGGIDNDIKV 209
Query: 241 WNLDNLECVQTLKGHSDTVTSL-LFWD-EYLFSSSLDETIKIW 281
W+L + + +++GH D+VT L L D YL S+S+D ++++W
Sbjct: 210 WDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVW 252
Score = 69 (29.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 68 RFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDS 127
R + W +V GD + ATL GH AV + + + L+S S D V VWD ++
Sbjct: 78 RLILMW--NVYGD--CENYATL---KGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSET 130
Query: 128 GRCV 131
G V
Sbjct: 131 GERV 134
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 93 (37.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + WN E V+TL GH + L + D + S S D TI++W
Sbjct: 447 TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 491
Score = 92 (37.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 434 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 491
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 492 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 531
Score = 73 (30.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 95 HKKAVTNVG---LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWV 150
H ++ T+ G L K+ SG RD + +WD+++ C ++T + + CL + +
Sbjct: 297 HCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVI 356
Query: 151 FLGLPNA-VKSW 161
G ++ V+ W
Sbjct: 357 ITGSSDSTVRVW 368
Score = 71 (30.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIW 281
C++TL HS V L F DE+ + SSS D+TI IW
Sbjct: 547 CLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIW 580
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 93 (37.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + WN E V+TL GH + L + D + S S D TI++W
Sbjct: 447 TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 491
Score = 92 (37.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 434 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 491
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 492 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 531
Score = 73 (30.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 95 HKKAVTNVG---LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWV 150
H ++ T+ G L K+ SG RD + +WD+++ C ++T + + CL + +
Sbjct: 297 HCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVI 356
Query: 151 FLGLPNA-VKSW 161
G ++ V+ W
Sbjct: 357 ITGSSDSTVRVW 368
Score = 71 (30.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIW 281
C++TL HS V L F DE+ + SSS D+TI IW
Sbjct: 547 CLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIW 580
>ASPGD|ASPL0000054401 [details] [associations]
symbol:AN0305 species:162425 "Emericella nidulans"
[GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000006 InterPro:IPR007148 Pfam:PF04003
HOGENOM:HOG000212524 KO:K14556 OMA:SIFAHDD OrthoDB:EOG4N07P3
RefSeq:XP_657909.1 ProteinModelPortal:Q5BGM5 STRING:Q5BGM5
EnsemblFungi:CADANIAT00002409 GeneID:2876084 KEGG:ani:AN0305.2
Uniprot:Q5BGM5
Length = 963
Score = 86 (35.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 80 DNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
D+ T ++ ++ NGHK A+T + + +L SGSRD + +WD
Sbjct: 101 DSRTETV--MISFNGHKSAITQLAFDNAGVRLASGSRDTNIILWD 143
Score = 85 (35.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 33/134 (24%), Positives = 55/134 (41%)
Query: 219 DTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEY-------LFS 271
D W+SK V T R W LD +C ++ H D++ ++ F FS
Sbjct: 612 DISWDSK--LIVTCSADKTVRLWGLDFGDCHKSFLAHEDSIMAVAFVPSNNEGNGHNFFS 669
Query: 272 SSLDETIKIW---LYTHT-KNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLR 327
S D IK W + H K + ++ M + + ++ D +IR +E +L
Sbjct: 670 VSKDRVIKYWDGDKFEHIQKLSGHHGEIWAMAISHTGEFIVTASHDKSIRTWEQTDEQLF 729
Query: 328 ARIFSRREVEVDQI 341
RE E+++I
Sbjct: 730 LE--EEREKELEEI 741
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 93 (37.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + WN E V+TL GH + L + D + S S D TI++W
Sbjct: 411 TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 455
Score = 92 (37.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 398 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 455
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 456 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 495
Score = 72 (30.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 95 HKKAVTNVG---LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWV 150
H ++ T+ G L K+ SG RD + +WD+ + C ++T + + CL + +
Sbjct: 261 HCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVI 320
Query: 151 FLGLPNA-VKSW 161
G ++ V+ W
Sbjct: 321 ITGSSDSTVRVW 332
Score = 71 (30.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIW 281
C++TL HS V L F DE+ + SSS D+TI IW
Sbjct: 511 CLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIW 544
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 81 (33.6 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWDEY--LFSSSLDETIKIWLY---THTKNNAELSSL 295
W++ + E VQ H V +++F DE S+S D+++++W + K AE S+
Sbjct: 268 WDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAE-PSM 326
Query: 296 FGMLDAEAKPV---LFSSGKDSAIRLYELPS-FKL-RARIFSRREV-----EVDQIGPAG 345
M P L D+ I ++ + F+L + +IF V +VD
Sbjct: 327 HSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMS 386
Query: 346 LFFPGDASGSVGVWKW 361
GD +G + +W W
Sbjct: 387 YVISGDGNGKLNIWDW 402
Score = 80 (33.2 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITN 136
GH KAV ++ + + S + D + +WD ++G+C++ TN
Sbjct: 195 GHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN 237
Score = 39 (18.8 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 60 SCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGH 95
S V +KC +H G S L L+GH
Sbjct: 132 SSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGH 167
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 81 (33.6 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWDEY--LFSSSLDETIKIWLY---THTKNNAELSSL 295
W++ + E VQ H V +++F DE S+S D+++++W + K AE S+
Sbjct: 271 WDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAE-PSM 329
Query: 296 FGMLDAEAKPV---LFSSGKDSAIRLYELPS-FKL-RARIFSRREV-----EVDQIGPAG 345
M P L D+ I ++ + F+L + +IF V +VD
Sbjct: 330 HSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMS 389
Query: 346 LFFPGDASGSVGVWKW 361
GD +G + +W W
Sbjct: 390 YVISGDGNGKLNIWDW 405
Score = 80 (33.2 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITN 136
GH KAV ++ + + S + D + +WD ++G+C++ TN
Sbjct: 198 GHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN 240
Score = 39 (18.8 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 60 SCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGH 95
S V +KC +H G S L L+GH
Sbjct: 135 SSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGH 170
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 83 (34.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGR 129
L+ GH V + + S + L +GS+DG V +WD SGR
Sbjct: 423 LLDQEGHSDGVMGISIQSDGSLLATGSQDGLVRIWDLRSGR 463
Score = 83 (34.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
+TW+ + + T +GHS VTS+ + + S+S D+T KIW
Sbjct: 554 KTWSPNTWSPLATFEGHSSKVTSIDLTNSKILSTSFDKTWKIW 596
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 93 (37.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + WN E V+TL GH + L + D + S S D TI++W
Sbjct: 447 TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 491
Score = 92 (37.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 434 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 491
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 492 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 531
Score = 72 (30.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 95 HKKAVTNVG---LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWV 150
H ++ T+ G L K+ SG RD + +WD+ + C ++T + + CL + +
Sbjct: 297 HCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVI 356
Query: 151 FLGLPNA-VKSW 161
G ++ V+ W
Sbjct: 357 ITGSSDSTVRVW 368
Score = 71 (30.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIW 281
C++TL HS V L F DE+ + SSS D+TI IW
Sbjct: 547 CLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIW 580
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 93 (37.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + WN E V+TL GH + L + D + S S D TI++W
Sbjct: 447 TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 491
Score = 92 (37.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 434 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 491
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 492 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 531
Score = 72 (30.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 95 HKKAVTNVG---LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWV 150
H ++ T+ G L K+ SG RD + +WD+ + C ++T + + CL + +
Sbjct: 297 HCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVI 356
Query: 151 FLGLPNA-VKSW 161
G ++ V+ W
Sbjct: 357 ITGSSDSTVRVW 368
Score = 71 (30.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIW 281
C++TL HS V L F DE+ + SSS D+TI IW
Sbjct: 547 CLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIW 580
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 93 (37.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + WN E V+TL GH + L + D + S S D TI++W
Sbjct: 447 TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 491
Score = 92 (37.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 434 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNTIRLW 491
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 492 DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 531
Score = 72 (30.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 95 HKKAVTNVG---LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWV 150
H ++ T+ G L K+ SG RD + +WD+ + C ++T + + CL + +
Sbjct: 297 HCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVI 356
Query: 151 FLGLPNA-VKSW 161
G ++ V+ W
Sbjct: 357 ITGSSDSTVRVW 368
Score = 71 (30.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 248 CVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIW 281
C++TL HS V L F DE+ + SSS D+TI IW
Sbjct: 547 CLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIW 580
>TAIR|locus:2116194 [details] [associations]
symbol:AT4G34380 "AT4G34380" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL035521 EMBL:AL161585
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005888
EMBL:AK118385 IPI:IPI00526524 PIR:T04784 RefSeq:NP_195164.1
UniGene:At.31507 ProteinModelPortal:Q9SZ03 SMR:Q9SZ03 IntAct:Q9SZ03
STRING:Q9SZ03 EnsemblPlants:AT4G34380.1 GeneID:829588
KEGG:ath:AT4G34380 TAIR:At4g34380 InParanoid:Q9SZ03 OMA:VEEERAC
PhylomeDB:Q9SZ03 Genevestigator:Q9SZ03 Uniprot:Q9SZ03
Length = 495
Score = 104 (41.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 28/136 (20%), Positives = 59/136 (43%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLF-WDEYLFSSSLDETIKIWLYT-------HTKN 288
T + W + + +C++++ H D + S++ +D+ +F+ S D T+K+W HT
Sbjct: 258 TIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVFTGSADGTVKVWKRELQGKGTKHTLA 317
Query: 289 NAEL---SSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAG 345
L +++ + +++ D + +E I + V +G AG
Sbjct: 318 QVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIAG 377
Query: 346 -LFFPGDASGSVGVWK 360
L G A ++ VW+
Sbjct: 378 NLLLSGSADKNICVWR 393
Score = 58 (25.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 23/106 (21%), Positives = 44/106 (41%)
Query: 61 CVYGDKCRFLHSWVHSVDGDNT--TNSL-ATLMKLNGHKKAVTNVGLPSGSNKLYSGSRD 117
CV R W + DN TN L ++++ GH + L + + LY+GS
Sbjct: 90 CVMSPWARVSPPWGADFNEDNVLETNGLIGSIVRKEGHIYS-----LAASGDLLYTGSDS 144
Query: 118 GRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVFLGLPNA-VKSWR 162
+ VW ++ ++ I ++ G +F G + ++ W+
Sbjct: 145 KNIRVW-KNLKEHAGFKSSSGLIKAIVIFGDRIFTGHQDGKIRIWK 189
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 86 (35.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLF-WDEYLFSSSLDE-TIKIW---LYTHTKNNAE 291
T + W+ TL+GH D V S++F D L +S+ D+ T++IW +H
Sbjct: 444 TVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEG 503
Query: 292 LSSLFGMLD-AEAKPVLFSSGKDSAIRLYELPSFKLR 327
SSL + + +L S+ D +R++++ + L+
Sbjct: 504 HSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQ 540
Score = 79 (32.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 23/93 (24%), Positives = 41/93 (44%)
Query: 72 SWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCV 131
+W+ + D + L L GH+ AV +V S L S S D V +WD ++G
Sbjct: 273 NWIETKP-DVANHWSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQ 331
Query: 132 NVITNGAEI--GCLISEGSWVFLGLPNA-VKSW 161
+ + +++ + S S + ++ VK W
Sbjct: 332 HTLEGHSDLVRSVIFSHDSRLLASASDSTVKIW 364
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 95 (38.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 34/134 (25%), Positives = 56/134 (41%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIW------LYT-HTK 287
T R W+L + GH+ V S+ F + + S S D+TIK+W YT +
Sbjct: 86 TLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDE 145
Query: 288 NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR-IFSRREVEVDQIGPAG- 345
+ E S + P++ S G D ++++ L + KL+ I + + P G
Sbjct: 146 GHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 205
Query: 346 LFFPGDASGSVGVW 359
L G G +W
Sbjct: 206 LCASGGKDGQAMLW 219
Score = 62 (26.9 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG 128
L GH V++V + S SG+ DG + +WD +G
Sbjct: 59 LKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTG 95
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 94 (38.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIW 281
+ R W+ C +TL GH+ +VT L W D L+S+S D TIK+W
Sbjct: 228 SVRVWDTTAGRCERTLTGHAQSVTCLR-WGGDGLLYSASQDRTIKVW 273
Score = 68 (29.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNG 137
GH+ V ++ KL SG ++G++ +WD +G+ V G
Sbjct: 155 GHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTG 198
>SGD|S000001744 [details] [associations]
symbol:CAF4 "WD40 repeat-containing protein associated with
the CCR4-NOT complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IPI] [GO:0030014 "CCR4-NOT complex" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016559 "peroxisome
fission" evidence=IGI] [GO:0000266 "mitochondrial fission"
evidence=IMP;IPI] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000001744 GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006357 EMBL:BK006944
GO:GO:0016559 GO:GO:0030014 EMBL:Z28261 PIR:S38108
RefSeq:NP_012962.3 PDB:2PQR PDBsum:2PQR ProteinModelPortal:P36130
SMR:P36130 DIP:DIP-5945N IntAct:P36130 MINT:MINT-674079
STRING:P36130 PaxDb:P36130 PeptideAtlas:P36130 EnsemblFungi:YKR036C
GeneID:853908 KEGG:sce:YKR036C GeneTree:ENSGT00550000075528
HOGENOM:HOG000048466 OrthoDB:EOG469V30 EvolutionaryTrace:P36130
NextBio:975239 Genevestigator:P36130 GermOnline:YKR036C
GO:GO:0000266 InterPro:IPR021653 Pfam:PF11615 Uniprot:P36130
Length = 643
Score = 93 (37.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
R W+L + V+ L+GH+D +TSL F E L + S+D +++IW
Sbjct: 512 RLWDLRVGKPVRLLEGHTDGITSLKFDSEKLVTGSMDNSVRIW 554
Score = 72 (30.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 95 HKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCV 131
HK +T L S L SGSRD ++ WD +G+C+
Sbjct: 423 HKDEIT--ALSFDSEALVSGSRDKKIFHWDLTTGKCI 457
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 96 (38.9 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 35/131 (26%), Positives = 57/131 (43%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSSLF 296
+ W++ C+ K H+ V L F + +L S++ D T+K+W T K E + +
Sbjct: 129 KLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 188
Query: 297 GMLDA-EAKP---VLFSSGKDS-AIRLYELPSFKLRARIFSRRE-VEVDQIGPAGLFFPG 350
G ++ E P L +SG S IR ++L F + + I V P G G
Sbjct: 189 GPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYG 248
Query: 351 DASGSVGVWKW 361
S+ V+ W
Sbjct: 249 GFQDSLRVYGW 259
Score = 69 (29.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLIS---EGS 148
L GH + ++ + + + +GS+ G + VWD ++ + + + C + GS
Sbjct: 58 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS 117
Query: 149 WVFLG-LPNAVKSW 161
+V G L +K W
Sbjct: 118 FVASGSLDTDIKLW 131
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 87 (35.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVN-VITNGAEI-GC-LIS 145
L +L GHK A+T N L S +D V WD D+ C V+ + E+ G L+S
Sbjct: 142 LYRLKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVS 201
Query: 146 EGSWVFLGLPNA-VKSW 161
E + G ++ +++W
Sbjct: 202 EEKRLITGASDSELRAW 218
Score = 82 (33.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
+ W+ D E VQTL+GH + L +Y+ SSS D+++++W
Sbjct: 658 KQWDADKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLW 702
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 98 (39.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSL-LFWDEYLFSS-SLDETIKIWLYTHTKN 288
HT + W++ CV T +GH+D V + + D LF+S SLD+T+ +W + TK+
Sbjct: 213 HTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFA-TKS 266
Score = 61 (26.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 80 DNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
D T L +K GH AV ++ + + +L S S D + +WD
Sbjct: 134 DYETGQLERTLK--GHTDAVNDIAIDAAGKQLVSCSSDLSIKLWD 176
Score = 59 (25.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 91 KLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGR 129
KL GH+ +T V + S S D + VWD ++G+
Sbjct: 101 KLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQ 139
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 94 (38.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 29/131 (22%), Positives = 56/131 (42%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIWLYTHTKNNAELSS 294
T R W++ V TL GH++ V ++ + + + S D TI++W K L++
Sbjct: 310 TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTN 369
Query: 295 LFGMLDAEA-KPVL--FSSGKDSAIRLYELPSFKLRARIFSRREV-EVDQIGPAGLFFPG 350
+ A P+L F+SG I+ ++ P + + + G+ G
Sbjct: 370 HKKSVRAVVLHPLLYTFASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLAVNADGVLVSG 429
Query: 351 DASGSVGVWKW 361
+G++ +W W
Sbjct: 430 ADNGTMHLWDW 440
Score = 68 (29.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLISEGS- 148
++GH V + + G+ +GS D + +WD SG+ +T G ++S S
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 149 WVF-LGLPNAVKSW 161
++F G VK W
Sbjct: 259 YLFSCGEDKQVKCW 272
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 34/111 (30%), Positives = 52/111 (46%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T + WN EC+ T GH V L F L S S+D+T+KIW + K+ L
Sbjct: 410 TIKVWNWRTGECISTYTGHRGGVIGLHFDASILASGSVDKTVKIWNF-EDKSTFSLRGHT 468
Query: 297 GMLDA----EAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGP 343
++A + +FS+ D +RL++L + K R F +V Q+ P
Sbjct: 469 DWVNAVRVDTSSRTVFSASDDCTVRLWDLDT-KTCIRTFHGHVGQVQQVVP 518
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 83 (34.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITN 136
GH KAV +V + + S + D + +WD ++G+C++ TN
Sbjct: 329 GHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDSETGQCISRFTN 371
Score = 81 (33.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 35/136 (25%), Positives = 58/136 (42%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWDEY--LFSSSLDETIKIWLY---THTKNNAELSSL 295
W++ + E VQ H V ++ F DE S+S D+++++W + K AE S+
Sbjct: 402 WDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPADFKYIAE-PSM 460
Query: 296 FGMLDAEAKPV---LFSSGKDSAIRLYELPS-FKL-RARIFSRREV-----EVDQIGPAG 345
M P L D+ I ++ + F+L + +IF V +VD
Sbjct: 461 HSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMS 520
Query: 346 LFFPGDASGSVGVWKW 361
GDA G + +W W
Sbjct: 521 YVVSGDADGKLNIWDW 536
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 84 (34.6 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 35/136 (25%), Positives = 59/136 (43%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWDEY--LFSSSLDETIKIWLY---THTKNNAELSSL 295
W++ + E VQ H V +++F DE S+S D+++++W + K AE S+
Sbjct: 404 WDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAE-PSM 462
Query: 296 FGMLDAEAKPV---LFSSGKDSAIRLYELPS-FKL-RARIFSRREV-----EVDQIGPAG 345
M P L D+ I ++ + F+L + +IF V +VD
Sbjct: 463 HSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMS 522
Query: 346 LFFPGDASGSVGVWKW 361
GDA G + +W W
Sbjct: 523 YVISGDADGKLNIWDW 538
Score = 81 (33.6 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITN 136
GH KAV ++ + + S + D + +WD ++G+C++ TN
Sbjct: 331 GHGKAVRDICFNNAGTRFLSAAYDRYIKLWDTETGQCISRFTN 373
Score = 37 (18.1 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 65 DKCRFLHSWVHSVDGDNTTNSLATLMKLNGH 95
+KC +H G S L L+GH
Sbjct: 273 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGH 303
>ASPGD|ASPL0000003533 [details] [associations]
symbol:AN6867 species:162425 "Emericella nidulans"
[GO:0000002 "mitochondrial genome maintenance" evidence=IEA]
[GO:0000266 "mitochondrial fission" evidence=IEA] [GO:0016559
"peroxisome fission" evidence=IEA] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005741 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 EMBL:AACD01000113 HOGENOM:HOG000048466
OrthoDB:EOG469V30 RefSeq:XP_664471.1 HSSP:P46680
ProteinModelPortal:Q5AXW3 STRING:Q5AXW3
EnsemblFungi:CADANIAT00007667 GeneID:2870567 KEGG:ani:AN6867.2
OMA:CVQTLDV Uniprot:Q5AXW3
Length = 654
Score = 84 (34.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
R W+L + + ++L GH+ V+ L F D +L + SLD +I+IW
Sbjct: 523 RLWDLRSGQVHRSLVGHTGPVSCLQFDDVHLVTGSLDRSIRIW 565
Score = 81 (33.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 22/75 (29%), Positives = 34/75 (45%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEG 147
+ + H VT + L + + + D V VWD + GRC + + A + CL E
Sbjct: 318 IKEFQAHTDVVTALDLDYPFGTMITAALDDTVRVWDLNIGRCTGFLEGHNASVRCLQIED 377
Query: 148 SWVFLGLPNA-VKSW 161
+ V G +A VK W
Sbjct: 378 NVVATGSMDATVKLW 392
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 84 (34.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIW------LYTHTKN 288
T R W+L + + +GH+ V S+ F + + S S D+TIK+W +T ++
Sbjct: 87 TLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQED 146
Query: 289 -NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLR 327
+ + S + P++ S G D ++++ L + KL+
Sbjct: 147 GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLK 186
Score = 73 (30.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 59 DSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDG 118
D+ + + + L W + D D TN +L GH +++V L S N SGS D
Sbjct: 29 DTIISASRDKTLIVWKLTRDED--TNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQ 86
Query: 119 RVSVWDRDSGR 129
+ +WD +G+
Sbjct: 87 TLRLWDLAAGK 97
>POMBASE|SPBC3D6.12 [details] [associations]
symbol:dip2 "U3 snoRNA associated protein Dip2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0030515
"snoRNA binding" evidence=ISO] [GO:0032040 "small-subunit
processome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC3D6.12 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032040 GO:GO:0030490
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 PIR:T40372 RefSeq:NP_595524.1
ProteinModelPortal:P87177 STRING:P87177 EnsemblFungi:SPBC3D6.12.1
GeneID:2540971 KEGG:spo:SPBC3D6.12 NextBio:20802086 Uniprot:P87177
Length = 922
Score = 84 (34.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 33/132 (25%), Positives = 57/132 (43%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSL-LFWD-EYLFSSSLDETIKIWLYT----HTKNN 289
+T + + LD+L+ L GH V S+ + +D + L + S D+ +KIW H
Sbjct: 556 NTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSADKNVKIWGLDFGDCHKSIF 615
Query: 290 AELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRR-EVEVDQIGPAGLFF 348
A S+ + F+ KD +R ++ SF L ++ EV +GP
Sbjct: 616 AHQDSIMEVTFQPDTYNFFTCSKDREVRYWDGKSFDLILKLRGHHSEVWALAVGPT-FVV 674
Query: 349 PGDASGSVGVWK 360
G S+ +W+
Sbjct: 675 SGSHDHSIRLWE 686
Score = 83 (34.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD 124
L+ LNGHK AVT + +L SGS D + VWD
Sbjct: 97 LITLNGHKSAVTTMDFDKMGTRLASGSMDTDIIVWD 132
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 80 (33.2 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 24/94 (25%), Positives = 48/94 (51%)
Query: 235 GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTK---NN 289
GH + +++ + + V TL GH+ V + F ++ + SSS D ++KIW + K
Sbjct: 234 GHM-KLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTF 292
Query: 290 AE-LSSLFGMLDAEAKPVLFSSGKDSAIRLYELP 322
AE ++G+ + + S+ +D ++ +Y P
Sbjct: 293 AEHTDQVWGVRYSPGNDKVASASEDKSLNIYYCP 326
Score = 76 (31.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 33/120 (27%), Positives = 47/120 (39%)
Query: 18 GGETMMSDDDDLMKGRAEEREEMFGFGLAAMAIRVCNNWISDSCVYGDKCRFLHSWVHSV 77
G +T SD DD + E E F F + D V G + W +
Sbjct: 22 GRDTAASDPDDAV---VEPEENPFDFDKKEARPK-------DFLVTGGLDDLVKVW--DL 69
Query: 78 DGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNG 137
DNT L KL GH V +V + S + S S D + +WD SG ++++ G
Sbjct: 70 QEDNT---LKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFG 126
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 91 (37.1 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 69 FLHSWVHSVDGDNT-----TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
F ++ S GD T T++ + LNGHK+ + L + SGS D + +W
Sbjct: 341 FDEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDNSIRLW 398
Query: 124 DRDSGRCVNVITNGAE-IGCLISEGSWVFLGLPNA-VKSW 161
D + G C+ V+ E + C+ + + G + +K W
Sbjct: 399 DIECGACLRVLEGHEELVRCIRFDTKRIVSGAYDGKIKVW 438
Score = 69 (29.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 245 NLECVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIW 281
N C+ TL H+ V L F DE+ + SSS D+TI IW
Sbjct: 451 NTLCLNTLVEHTGRVFRLQF-DEFQIVSSSHDDTILIW 487
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 81 (33.6 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWDEY--LFSSSLDETIKIWLY---THTKNNAELSSL 295
W++ + E VQ H V +++F DE S+S D+++++W + K AE S+
Sbjct: 403 WDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAE-PSM 461
Query: 296 FGMLDAEAKPV---LFSSGKDSAIRLYELPS-FKL-RARIFSRREV-----EVDQIGPAG 345
M P L D+ I ++ + F+L + +IF V +VD
Sbjct: 462 HSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMS 521
Query: 346 LFFPGDASGSVGVWKW 361
GD +G + +W W
Sbjct: 522 YVISGDGNGKLNIWDW 537
Score = 80 (33.2 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITN 136
GH KAV ++ + + S + D + +WD ++G+C++ TN
Sbjct: 330 GHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN 372
Score = 39 (18.8 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 60 SCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGH 95
S V +KC +H G S L L+GH
Sbjct: 267 STVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGH 302
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 81 (33.6 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWDEY--LFSSSLDETIKIWLY---THTKNNAELSSL 295
W++ + E VQ H V +++F DE S+S D+++++W + K AE S+
Sbjct: 403 WDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAE-PSM 461
Query: 296 FGMLDAEAKPV---LFSSGKDSAIRLYELPS-FKL-RARIFSRREV-----EVDQIGPAG 345
M P L D+ I ++ + F+L + +IF V +VD
Sbjct: 462 HSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMS 521
Query: 346 LFFPGDASGSVGVWKW 361
GD +G + +W W
Sbjct: 522 YVISGDGNGKLNIWDW 537
Score = 80 (33.2 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITN 136
GH KAV ++ + + S + D + +WD ++G+C++ TN
Sbjct: 330 GHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN 372
Score = 39 (18.8 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 60 SCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGH 95
S V +KC +H G S L L+GH
Sbjct: 267 STVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGH 302
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 81 (33.6 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWDEY--LFSSSLDETIKIWLY---THTKNNAELSSL 295
W++ + E VQ H V +++F DE S+S D+++++W + K AE S+
Sbjct: 403 WDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAE-PSM 461
Query: 296 FGMLDAEAKPV---LFSSGKDSAIRLYELPS-FKL-RARIFSRREV-----EVDQIGPAG 345
M P L D+ I ++ + F+L + +IF V +VD
Sbjct: 462 HSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMS 521
Query: 346 LFFPGDASGSVGVWKW 361
GD +G + +W W
Sbjct: 522 YVISGDGNGKLNIWDW 537
Score = 80 (33.2 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITN 136
GH KAV ++ + + S + D + +WD ++G+C++ TN
Sbjct: 330 GHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN 372
Score = 39 (18.8 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 60 SCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGH 95
S V +KC +H G S L L+GH
Sbjct: 267 SSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGH 302
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 107 (42.7 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 28/113 (24%), Positives = 58/113 (51%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSS 294
T R WN+D +CVQTL+GH+ + L++ + + S++ D +K+W + + A L +
Sbjct: 530 TIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDN 589
Query: 295 ----LFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSR--REVEVDQI 341
++ + +L S G D+ + +++ + + A+ R VE +Q+
Sbjct: 590 HEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEELERRVEAEQL 642
Score = 56 (24.8 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
+ H + V + + + S S+D + +WD +G V V+
Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVL 503
Score = 55 (24.4 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 111 LYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLISE-GSWVFLGLPN-AVKSW 161
L SG+ D RV +WD +S R + V + + G GS++ G + V+ W
Sbjct: 162 LASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVW 216
>UNIPROTKB|H9L227 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR000772
PROSITE:PS50231 GeneTree:ENSGT00700000104487 EMBL:AADN02059449
EMBL:AADN02059450 Ensembl:ENSGALT00000035741 Uniprot:H9L227
Length = 219
Score = 92 (37.4 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 30/96 (31%), Positives = 49/96 (51%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVT--SLLFWDEYLFSSSLDETIKIWLYTHTKNNAEL-- 292
T R W++ N CVQ ++ H +VT SL +YL SSS D+ W ++ + L
Sbjct: 103 TIRIWSVPNASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQ---YWAFSDIQTGRVLTK 159
Query: 293 ----SSLFGMLDAEAKP--VLFSSGK-DSAIRLYEL 321
SS + A+ P ++F +G DS I++++L
Sbjct: 160 VTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDL 195
Score = 56 (24.8 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 105 PSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSW--VFLGLPNA-VKS 160
PS +NK+ +G D V V+D+ S + + + + ++ ++ S VF P+A ++
Sbjct: 47 PSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRI 106
Query: 161 W 161
W
Sbjct: 107 W 107
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 111 (44.1 bits), Expect = 0.00079, Sum P(2) = 0.00078
Identities = 46/192 (23%), Positives = 71/192 (36%)
Query: 181 GSEGGVISVWKGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRT 240
G E G I V + + R + C ++ T +S +A + +
Sbjct: 981 GQENGAIKVLR-LLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVI--------QV 1031
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAELSSLFG-M 298
WN ECV LKGH + + F + L S S D T+K+W T K + + G +
Sbjct: 1032 WNWQLNECV-FLKGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAV 1090
Query: 299 LDAEAKP--VLFSS-GKDSAIRLYELPSFKLRARIFSRRE-VEVDQIGPAG-LFFPGDAS 353
L P FSS D +++ S + + V P+ L GD
Sbjct: 1091 LSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDK 1150
Query: 354 GSVGVWKWLLAE 365
G + +W L E
Sbjct: 1151 GDIRIWDILTGE 1162
Score = 56 (24.8 bits), Expect = 0.00079, Sum P(2) = 0.00078
Identities = 17/99 (17%), Positives = 39/99 (39%)
Query: 45 LAAMAIRVCNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGL 104
L+ + +R + + +C D+ R S L++++ H +
Sbjct: 605 LSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTF 664
Query: 105 PSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE-IGC 142
+ + + S D +V +W+ +G+C+ V E + C
Sbjct: 665 SADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNC 703
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 111 (44.1 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 46/192 (23%), Positives = 71/192 (36%)
Query: 181 GSEGGVISVWKGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRT 240
G E G I V + + R + C ++ T +S +A + +
Sbjct: 982 GQENGAIKVLR-LLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVI--------QV 1032
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAELSSLFG-M 298
WN ECV LKGH + + F + L S S D T+K+W T K + + G +
Sbjct: 1033 WNWQLNECV-FLKGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAV 1091
Query: 299 LDAEAKP--VLFSS-GKDSAIRLYELPSFKLRARIFSRRE-VEVDQIGPAG-LFFPGDAS 353
L P FSS D +++ S + + V P+ L GD
Sbjct: 1092 LSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDK 1151
Query: 354 GSVGVWKWLLAE 365
G + +W L E
Sbjct: 1152 GDIRIWDILTGE 1163
Score = 56 (24.8 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 17/99 (17%), Positives = 39/99 (39%)
Query: 45 LAAMAIRVCNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGL 104
L+ + +R + + +C D+ R S L++++ H +
Sbjct: 606 LSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTF 665
Query: 105 PSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE-IGC 142
+ + + S D +V +W+ +G+C+ V E + C
Sbjct: 666 SADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNC 704
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 111 (44.1 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 46/192 (23%), Positives = 71/192 (36%)
Query: 181 GSEGGVISVWKGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRT 240
G E G I V + + R + C ++ T +S +A + +
Sbjct: 985 GQENGAIKVLR-LLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVI--------QV 1035
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAELSSLFG-M 298
WN ECV LKGH + + F + L S S D T+K+W T K + + G +
Sbjct: 1036 WNWQLNECV-FLKGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAV 1094
Query: 299 LDAEAKP--VLFSS-GKDSAIRLYELPSFKLRARIFSRRE-VEVDQIGPAG-LFFPGDAS 353
L P FSS D +++ S + + V P+ L GD
Sbjct: 1095 LSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDK 1154
Query: 354 GSVGVWKWLLAE 365
G + +W L E
Sbjct: 1155 GDIRIWDILTGE 1166
Score = 56 (24.8 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 17/99 (17%), Positives = 39/99 (39%)
Query: 45 LAAMAIRVCNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGL 104
L+ + +R + + +C D+ R S L++++ H +
Sbjct: 605 LSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTF 664
Query: 105 PSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE-IGC 142
+ + + S D +V +W+ +G+C+ V E + C
Sbjct: 665 SADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNC 703
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 91 (37.1 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 74 VHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPS-GSNKLYSGSRDGRVSVWDRDSGRCVN 132
+H D TT + + GH++ + ++ + G L+SGS DG + +WD +
Sbjct: 125 MHLASWDLTTGE--RIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDPRKKHAAD 182
Query: 133 VITNGAEIGCL-ISE-GSWVFLG-LPNAVKSW 161
I + + + ISE G+ ++ G + N +K W
Sbjct: 183 YIESDFPVTAVAISEAGNEIYSGGIDNDIKVW 214
Score = 64 (27.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIW 281
+ W++ V + GH DT+T+L + L S ++D T + W
Sbjct: 212 KVWDVRKKAVVYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTW 256
>TAIR|locus:2085929 [details] [associations]
symbol:AT3G18950 "AT3G18950" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AP000735
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005434
EMBL:AK117650 IPI:IPI00535619 RefSeq:NP_188525.1 UniGene:At.38474
ProteinModelPortal:Q9LJ71 SMR:Q9LJ71 STRING:Q9LJ71
EnsemblPlants:AT3G18950.1 GeneID:821427 KEGG:ath:AT3G18950
TAIR:At3g18950 InParanoid:Q9LJ71 OMA:LAINQES PhylomeDB:Q9LJ71
Genevestigator:Q9LJ71 Uniprot:Q9LJ71
Length = 473
Score = 96 (38.9 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLF-WDEYLFSSSLDETIKIW 281
T + W L + +C+++++ H D + ++ +D+ LF+ S D T+K+W
Sbjct: 272 TLKVWRLSDSKCLESIQAHDDAINTVAAGFDDLLFTGSADGTLKVW 317
Score = 62 (26.9 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 19/94 (20%), Positives = 42/94 (44%)
Query: 73 WVH---SVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGR 129
W++ ++D D + T+++ +GH + L + + L++GS + VW
Sbjct: 115 WIYQTRNIDDDTDNGLIGTIVRQDGHVYS-----LAASGDLLFTGSDSKNIRVWKDLKDH 169
Query: 130 CVNVITNGAEIGCLISEGSWVFLGLPNA-VKSWR 162
T+G +I+ + +F G + ++ WR
Sbjct: 170 TGFKSTSGLVKAIVITGDNRIFTGHQDGKIRVWR 203
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 82 (33.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 28/93 (30%), Positives = 44/93 (47%)
Query: 233 FCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNA 290
F H + WN + + + TL+GH V F + L SSS D T+K+W K +
Sbjct: 425 FDNHV-KLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSE 483
Query: 291 EL----SSLFGMLDAEAKPVLFSSGKDSAIRLY 319
+L +F + + + S GKD AIR++
Sbjct: 484 DLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 78 (32.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT 135
L+GHK +VT V G+ K+Y+ S D + VW+ +G + ++
Sbjct: 278 LSGHKGSVTCVRW-GGTGKIYTSSHDRTIKVWNSQTGTLIQTLS 320
>UNIPROTKB|F1NU29 [details] [associations]
symbol:KIF21B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001752 InterPro:IPR015943 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00129
SMART:SM00320 GO:GO:0005524 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR009053
SUPFAM:SSF46579 GeneTree:ENSGT00680000099754 EMBL:AADN02064009
EMBL:AADN02064010 EMBL:AADN02064011 EMBL:AADN02064012
IPI:IPI00603032 Ensembl:ENSGALT00000000894 Uniprot:F1NU29
Length = 1638
Score = 97 (39.2 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 230 VFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
V C G + WN+DN V +KGH + ++ +++F++S D T+K+W
Sbjct: 1581 VLSACRGGVIKVWNVDNFTPVGEIKGHDSPINAICTNSKHIFTASSDLTVKLW 1633
Score = 73 (30.8 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD-RDSGRCVNVITNGAEI 140
+ L GH V ++ S + +++ S + VWD RDS RC+ +T+ ++
Sbjct: 1372 IASLKGHPNNVVSIKYCSHTGLVFTVSTS-YIKVWDIRDSARCIRTLTSSGQV 1423
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 92 (37.4 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 92 LNGHKKAVTNVGL-PSGSNK----LYSGSRDGRVSVWDRDSGRCVNVITNGAE-IGCLIS 145
L GH K +T + P +N + S S+DG V VWD +GRC ++T + + CL
Sbjct: 146 LAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 205
Query: 146 EGSWVFLGLPN--AVKSWR 162
G + +K WR
Sbjct: 206 GGDGLLYSASQDRTIKVWR 224
Score = 65 (27.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 20/83 (24%), Positives = 43/83 (51%)
Query: 252 LKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAEL----SSLFGMLDAEAKP 305
+ GH + +LF + + S+S D++IK+W K A L ++++ + +
Sbjct: 319 MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 378
Query: 306 VLFSSGKDSAIRLYELPSFKLRA 328
+L S DS ++++++ + KL A
Sbjct: 379 LLVSGSSDSTLKVWDVKAQKLAA 401
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 91 (37.1 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT 135
L +L GH+ VT++ G KL S S+D + VWD ++ C+ +++
Sbjct: 141 LFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVS 187
Score = 74 (31.1 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSL-LFWD-EYLFSSSLDETIKIWLYT----HTKNNA 290
T + + +D+L+ +L GH V + + D E + + S D+ +KIW H A
Sbjct: 563 TVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFA 622
Query: 291 ELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFK 325
S+ G+ LFS GKD ++ ++ F+
Sbjct: 623 HGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFE 657
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 371 353 0.00079 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 200
No. of states in DFA: 624 (66 KB)
Total size of DFA: 277 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.67u 0.11s 28.78t Elapsed: 00:00:01
Total cpu time: 28.71u 0.11s 28.82t Elapsed: 00:00:01
Start: Fri May 10 02:25:05 2013 End: Fri May 10 02:25:06 2013
WARNINGS ISSUED: 1