BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041206
(371 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0DYP5|C3H17_ORYSJ Zinc finger CCCH domain-containing protein 17 OS=Oryza sativa
subsp. japonica GN=Os02g0677700 PE=2 SV=2
Length = 435
Score = 267 bits (683), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 202/338 (59%), Gaps = 37/338 (10%)
Query: 51 RVCNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNK 110
R C +++ C YG+KCR+ HS+ + ++S+ L L GH+K VT + LP+GS+K
Sbjct: 112 RPCRYFLAGDCSYGEKCRYPHSY-------SMSDSITMLTPLQGHEKVVTGIALPAGSDK 164
Query: 111 LYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVFLGLPNAVKSWRVNAAS--- 167
LYSGS+DG V +WD +G+C VI G EIGC+ISEG W+F+G+P+AVK W + +
Sbjct: 165 LYSGSKDGTVRMWDCQTGQCAGVINMGREIGCMISEGPWLFVGIPDAVKVWNMQTQAEMN 224
Query: 168 -------VNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRA-PLWFCSLSSSND 219
V AL V N+LLFA ++ G I W+ + N F+ AS+ L SL
Sbjct: 225 LTGPTGQVYALAVGNELLFAATQDGRILAWRFSAATNGFEPAASLVGHQLAVVSLVVGAM 284
Query: 220 TRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIK 279
+++ + T R W+L L+C+QTL H+ V S+L WD++L S SLD+TIK
Sbjct: 285 RLYSASMD--------KTIRVWDLATLQCIQTLSDHTGVVMSVLCWDQFLLSCSLDQTIK 336
Query: 280 IW----------LYTHTKNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR 329
+W YTH + + L +L GM DA++KPVL S D+ +RLY+LPSF R R
Sbjct: 337 VWAATESGSLEVTYTHKEEHGAL-ALSGMPDAQSKPVLLCSLNDNTVRLYDLPSFSDRGR 395
Query: 330 IFSRREVEVDQIGPAGLFFPGDASGSVGVWKWLLAEQQ 367
IFS++E+ Q+GP+GLFF GD +G + VW+W++ Q
Sbjct: 396 IFSKQEIRAIQVGPSGLFFTGDGTGELKVWQWVIDGSQ 433
>sp|Q9FNZ1|C3H63_ARATH Zinc finger CCCH domain-containing protein 63 OS=Arabidopsis
thaliana GN=ZFWD2 PE=2 SV=1
Length = 443
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 198/338 (58%), Gaps = 43/338 (12%)
Query: 51 RVCNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNK 110
+VCN W+ +C YGDKCR+LH W + S A L +L+GH+K V+ + LPSGS+K
Sbjct: 113 KVCNFWVDGNCTYGDKCRYLHCW-------SKGESFALLTQLDGHEKLVSGIALPSGSDK 165
Query: 111 LYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVFLGLPNAVKSWRVN------ 164
LY+GS+D + VWD SG+C V+ G EIGC++SEG W+ +G+PN VK+W +
Sbjct: 166 LYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVLSEGPWLLVGMPNLVKAWNIETNADQS 225
Query: 165 ----AASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRA-PLWFCSLSSSND 219
V +LVV DLLFAG++ G I W+ N F+ AS+ L +L +
Sbjct: 226 LSGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGAN 285
Query: 220 TRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIK 279
++ + T + W+LDNL+C+QTL HS V SL+ WD++L S SLD T+K
Sbjct: 286 RLYSGSMD--------KTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQFLLSCSLDNTVK 337
Query: 280 IW----------LYTHTKNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKL--- 326
IW YTH + + L +L G+ DAEAKPVL + D+ +RLY+LPS L
Sbjct: 338 IWAAIEGGNLEVTYTHKEEHGVL-ALCGVHDAEAKPVLLCACNDNTLRLYDLPSLGLFIR 396
Query: 327 ---RARIFSRREVEVDQIGPAGLFFPGDASGSVGVWKW 361
R +IF+++E+ QIGP G+FF GD +G V VWKW
Sbjct: 397 FTERGKIFAKQEIRAIQIGPGGIFFTGDGTGQVKVWKW 434
>sp|Q9FNZ2|C3H48_ARATH Zinc finger CCCH domain-containing protein 48 OS=Arabidopsis
thaliana GN=ZFWD1 PE=2 SV=1
Length = 430
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 196/332 (59%), Gaps = 37/332 (11%)
Query: 51 RVCNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNK 110
++C W+ +C YGDKCR+LH W + +S + L +L+GH+K VT + LPSGS+K
Sbjct: 106 KLCKFWVDGNCPYGDKCRYLHCW-------SKGDSFSLLTQLDGHQKVVTGIALPSGSDK 158
Query: 111 LYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVFLGLPNAVKSWRVN------ 164
LY+ S+D V +WD SG+C V+ G E+GC+ISEG W+ +G+PN VK+W +
Sbjct: 159 LYTASKDETVRIWDCASGQCTGVLNLGGEVGCIISEGPWLLVGMPNLVKAWNIQNNADLS 218
Query: 165 ----AASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRA-PLWFCSLSSSND 219
V +LVV DLLFAG++ G I VW+ + F AS+ L SL +
Sbjct: 219 LNGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGAN 278
Query: 220 TRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIK 279
++ + ++ + W+LDNL+C+QTL H+ V SL+ WD++L S SLD T+K
Sbjct: 279 RLYSGAMDNSI--------KVWSLDNLQCIQTLTEHTSVVMSLICWDQFLLSCSLDNTVK 330
Query: 280 IW----------LYTHTKNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRAR 329
IW YTH + L +L G+ DAEAKPVL S D+++ LY+LPSF R +
Sbjct: 331 IWAATEGGNLEVTYTHKEEYGVL-ALCGVHDAEAKPVLLCSCNDNSLHLYDLPSFTERGK 389
Query: 330 IFSRREVEVDQIGPAGLFFPGDASGSVGVWKW 361
I +++E+ QIGP G+FF GD SG V VWKW
Sbjct: 390 ILAKQEIRSIQIGPGGIFFTGDGSGQVKVWKW 421
>sp|Q9FE91|C3H62_ARATH Zinc finger CCCH domain-containing protein 62 OS=Arabidopsis
thaliana GN=ZFWD4 PE=2 SV=1
Length = 419
Score = 241 bits (614), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 205/383 (53%), Gaps = 41/383 (10%)
Query: 4 RTMVDDDDEHKHSEGGETMMSDD---DDLMKGRAEEREEMFGFGLAAMAIRVCNNWISDS 60
R++V E+K EG ++D + G A + +++ VC W
Sbjct: 43 RSLVWTSKEYKSPEGNNMPRTNDVSPKPPVLGLARKNAACGPMRSSSLRKWVCKYWKDGK 102
Query: 61 CVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRV 120
C G++C+FLHSW + LA + L GH K + + LP GS+KL+S S DG +
Sbjct: 103 CKRGEQCQFLHSW-------SCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTL 155
Query: 121 SVWDRDSGRCVNVITNGAEIGCLISEGSWVFLGLPNAVKSWRVNAA------------SV 168
VWD +SG+CV+ I AE G LISEG WVFLGLPNA+K++ V + V
Sbjct: 156 RVWDCNSGQCVHSINLDAEAGSLISEGPWVFLGLPNAIKAFNVQTSQDLHLQAAGVVGQV 215
Query: 169 NALVVNNDLLFAGSEGGVISVWKGTF--VANPFKQVASIRAPLWFCSLSSSNDTRWNSKE 226
NA+ + N +LFAG+ G I VWK T ++PFK + S+ S T +
Sbjct: 216 NAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEG-------HSGEVTCFAVGG 268
Query: 227 EAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLY--- 283
+ T + W+L+ L+C+ TLK H+ TVTSLL WD+ L SSSLD TIK+W Y
Sbjct: 269 QMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDKCLISSSLDGTIKVWAYSEN 328
Query: 284 -------THTKNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIFSRREV 336
T + + + +L GM DAEAKP++F S ++ + +++LPSF+ R R+FS +
Sbjct: 329 GILKVVQTRRQEQSSVHALSGMHDAEAKPIIFCSYQNGTVGIFDLPSFQERGRMFSTHTI 388
Query: 337 EVDQIGPAGLFFPGDASGSVGVW 359
IGP GL F GD SG++ VW
Sbjct: 389 ATLTIGPQGLLFSGDESGNLRVW 411
>sp|Q9FKR9|C3H59_ARATH Zinc finger CCCH domain-containing protein 59 OS=Arabidopsis
thaliana GN=ZFWD3 PE=2 SV=1
Length = 472
Score = 231 bits (590), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 135/328 (41%), Positives = 183/328 (55%), Gaps = 33/328 (10%)
Query: 52 VCNNWISDSCVYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKL 111
VCN W +C G+KC+FLHSW + LA + L GHK + + LP GS+KL
Sbjct: 150 VCNFWKDGNCKKGEKCQFLHSW-------SCFPGLAMVAALEGHKNDIKGIALPQGSDKL 202
Query: 112 YSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVFLGLPNAVKSWRVN------- 164
+S S DG + +WD +SG+CV I AE G LISEG WVFLGLPNAVK++ V
Sbjct: 203 FSVSGDGTLLIWDCNSGQCVRSINLQAEAGSLISEGPWVFLGLPNAVKAFNVQNSKDVHL 262
Query: 165 ---AASVNALVVNNDLLFAGSEGGVISVWKGT-FVANPFKQVASIRAPLWFCSLSSSNDT 220
V+A+ N +LFAG+ G I VWK T ++PFK + S+ S T
Sbjct: 263 EGVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEG------HHSGEVT 316
Query: 221 RWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKI 280
+ E T + W+L+ L+C TLK H TVTSLL WD+ L SSSLD TIK+
Sbjct: 317 CFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDKCLISSSLDGTIKL 376
Query: 281 WLYTHT---------KNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARIF 331
W + K + +L GM DAEAKP++F S ++ A+ +++LPSF+ R ++F
Sbjct: 377 WACSENESLKVVQTRKQELSVHTLCGMHDAEAKPIMFCSYQNGAVGIFDLPSFEERGKMF 436
Query: 332 SRREVEVDQIGPAGLFFPGDASGSVGVW 359
S + + IGP GL F GD SG++ VW
Sbjct: 437 STQTICTLTIGPGGLLFSGDKSGNLRVW 464
>sp|P42527|MHCKA_DICDI Myosin heavy chain kinase A OS=Dictyostelium discoideum GN=mhkA PE=1
SV=2
Length = 1146
Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 29/209 (13%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG--RCV-NVITNGAEIGCLIS 145
L +NGH+K++ ++ SN +++ S D + V SG +C+ ++ + E+ C+++
Sbjct: 905 LYTVNGHRKSIESIA--CNSNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVA 962
Query: 146 EGSWVF-LGLPNAVKSWR------------VNAASVNALVVNNDLLFAGSEGGVISVWKG 192
++F +K W V+ + L ++ LF+G +I VW
Sbjct: 963 NEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRYLFSGGNDQIIYVWDT 1022
Query: 193 TFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTL 252
++ F W SL + +++ ++ + + W+L N C+ TL
Sbjct: 1023 ETLSMLFNMQGH---EDWVLSLHCTASYLFSTSKDNVI--------KIWDLSNFSCIDTL 1071
Query: 253 KGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
KGH ++V+S + D YL+S S D +IK+W
Sbjct: 1072 KGHWNSVSSCVVKDRYLYSGSEDNSIKVW 1100
Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/219 (25%), Positives = 86/219 (39%), Gaps = 66/219 (30%)
Query: 156 NAVKSWRVNAASVNALVVNNDLLFAGSEGGVISV------WKGTFVANPF-KQVASIRAP 208
+ ++S+R S+ A N LL AG G V WK + N K + SI
Sbjct: 863 STIQSFRERVNSI-AFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRKSIESIACN 921
Query: 209 LWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEY 268
+ SS ++T H R+ N +C++TL GH+ V ++ ++Y
Sbjct: 922 SNYIFTSSPDNT------------IKVHIIRS---GNTKCIETLVGHTGEVNCVVANEKY 966
Query: 269 LFSSSLDETIKIWLYT-----------HTK------------------------NNAELS 293
LFS S D+TIK+W + HTK + LS
Sbjct: 967 LFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRYLFSGGNDQIIYVWDTETLS 1026
Query: 294 SLFGMLDAE--------AKPVLFSSGKDSAIRLYELPSF 324
LF M E LFS+ KD+ I++++L +F
Sbjct: 1027 MLFNMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNF 1065
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 237 TTRTWNL-DNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSL 295
T R +++ DN +C+ T+ GH ++ S+ Y+F+SS D TIK+ + + N + +L
Sbjct: 892 TYRVFDVNDNWKCLYTVNGHRKSIESIACNSNYIFTSSPDNTIKVHI-IRSGNTKCIETL 950
Query: 296 FGMLD-----AEAKPVLFSSGKDSAIRLYELPSFK 325
G + LFS D I++++L +FK
Sbjct: 951 VGHTGEVNCVVANEKYLFSCSYDKTIKVWDLSTFK 985
Score = 35.8 bits (81), Expect = 0.48, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 72 SWVHSVDGDNTT-----NSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRD 126
S++ S DN ++ + + L GH +V++ + LYSGS D + VWD D
Sbjct: 1046 SYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSCVVKD--RYLYSGSEDNSIKVWDLD 1103
Query: 127 SGRCVNVITNGAEIG--CLI 144
+ CV I +G CL+
Sbjct: 1104 TLECVYTIPKSHSLGVKCLM 1123
>sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB
PE=2 SV=1
Length = 732
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 109/268 (40%), Gaps = 52/268 (19%)
Query: 80 DNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGA 138
D + ++ + L GH+ V ++ L+SGS D + VWD RC+ + +
Sbjct: 486 DYKSQNMECVQTLKGHEGPVESICY--NDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDK 543
Query: 139 EIGCLISEGSWVFLGLPN-AVKSWRV-----------NAASVNALVVNNDLLFAGSEGGV 186
+ ++ ++F G + +K W + +A +V L ++ LF+GS
Sbjct: 544 PVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKT 603
Query: 187 ISVWKGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFC-----------G 235
I VW + + R C+ + T+W V C
Sbjct: 604 IKVW----------DLKTFR-----CNYTLKGHTKW-------VTTICILGTNLYSGSYD 641
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSL 295
T R WNL +LEC TL+GH V ++ D+ LF++S D TIKIW + N L
Sbjct: 642 KTIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGH 701
Query: 296 FGMLDA----EAKPVLFSSGKDSAIRLY 319
+ E K + S D +IR++
Sbjct: 702 NATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 245 NLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGMLDAEAK 304
N+ECVQTLKGH V S+ + D+YLFS S D +IK+W + +L +F L+ K
Sbjct: 491 NMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVW------DLKKLRCIF-TLEGHDK 543
Query: 305 PV---------LFSSGKDSAIRLYELPSFKLRARIFSRREVEVDQIGPAGLFFPGDASGS 355
PV LFS D I++++L + + + + S F G +
Sbjct: 544 PVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKT 603
Query: 356 VGVW 359
+ VW
Sbjct: 604 IKVW 607
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 20/101 (19%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSL 295
H+ + W+L L C+ TL+GH V ++L D+YLFS S D+TIK+W +L +L
Sbjct: 522 HSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVW---------DLKTL 572
Query: 296 FG--MLDAEAKPV---------LFSSGKDSAIRLYELPSFK 325
L++ A+ V LFS D I++++L +F+
Sbjct: 573 ECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFR 613
>sp|Q54SF9|MHCKD_DICDI Myosin heavy chain kinase D OS=Dictyostelium discoideum GN=mhkD
PE=3 SV=1
Length = 941
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 48/265 (18%)
Query: 81 NTTNS-LATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
N NS L +++ L+GH + V ++ + KLYS S DG V +W+ +TN +
Sbjct: 621 NPLNSELTSIVHLSGHDERVCSLLINQDKTKLYSASADGYVKIWN---------LTNNED 671
Query: 140 IGCLISEGSWVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWK---GTFVA 196
+ + + S+R + S+ +++N LF S G I +W T
Sbjct: 672 LSKI------------QMIDSFRAHRRSIEKMLLNEKYLFTASSDGTIKIWSLPTTTTTT 719
Query: 197 NPFKQVASIRAPLWFC------SLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQ 250
KQ +S + + C + ND + + V + ++L +C++
Sbjct: 720 TTSKQSSSSSSSSYECIGKLEDHTAEVNDMCIDIENNFLVSCSFDKQIKIYDLSTFKCIK 779
Query: 251 TLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELS-SLFGMLDAEAKPV--- 306
+L H ++ S+ +YLFSSS D++IKIW + E+ ++GM DA P+
Sbjct: 780 SLNAHGKSIKSIYMSGKYLFSSSNDQSIKIW-------DLEMCMCVYGMNDAHDAPITSL 832
Query: 307 ------LFSSGKDSAIRLYELPSFK 325
LFS+ KD I+ + L +F+
Sbjct: 833 RMFGNRLFSASKDGEIKDWNLSTFQ 857
Score = 35.4 bits (80), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 90/211 (42%), Gaps = 32/211 (15%)
Query: 91 KLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSW 149
KL H V ++ + +N L S S D ++ ++D + +C+ + +G I + G +
Sbjct: 738 KLEDHTAEVNDMCIDIENNFLVSCSFDKQIKIYDLSTFKCIKSLNAHGKSIKSIYMSGKY 797
Query: 150 VFLGLPN-AVKSWRV------------NAASVNALVVNNDLLFAGSEGGVISVWKGTFVA 196
+F + ++K W + + A + +L + + LF+ S+ G I W
Sbjct: 798 LFSSSNDQSIKIWDLEMCMCVYGMNDAHDAPITSLRMFGNRLFSASKDGEIKDWN----L 853
Query: 197 NPFKQVASIRAPLWFCS--LSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDN----LECVQ 250
+ F+ ++ + L +SN + S +++ T R ++ N ++ +
Sbjct: 854 STFQPTTTLDQHNMAITDILVTSNGYLFVSSDDS--------TIRIIDISNQNEPIKIIS 905
Query: 251 TLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
+ K H V SL + +FS D IK+W
Sbjct: 906 STKAHRSGVNSLATDGKRIFSGGCDNLIKVW 936
>sp|P87053|POF1_SCHPO F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof1 PE=1 SV=1
Length = 605
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 48/254 (18%)
Query: 86 LATLMK---LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE-IG 141
LAT + L GH VT L KL SGS D + +W+ + C++++ + +
Sbjct: 300 LATFQQVALLEGHSSGVT--CLQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVL 357
Query: 142 CLISEGSWVFLGLPNA-VKSW----------RVNAASVNALVVNND--LLFAGSEGGVIS 188
CL + + + G + VK W R + VN++ + D L+ +GS+ I
Sbjct: 358 CLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIK 417
Query: 189 VWK-------GTFVAN--PFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTR 239
+W TF A+ P + +A + L+ CSL + +W+ +++ V GH
Sbjct: 418 IWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGT-IKQWDIEKKKCVHTLFGHIEG 476
Query: 240 TWNL--DNL-----------------ECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKI 280
W + D+L ECV TLK HS+ VTS+ D + S S D I +
Sbjct: 477 VWEIAADHLRLISGAHDGVVKVWEACECVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYL 536
Query: 281 WLYTHTKNNAELSS 294
WL+ + N + +S+
Sbjct: 537 WLFNNAPNESPVST 550
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
T R WNL + V L+GHS VT L F L S S+D+TI+IW Y + + +S L
Sbjct: 294 TIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNY---RTSECISILH 350
Query: 297 GMLDAEA-----KPVLFSSGKDSAIRLYELPSFK---LRARIFSRREVEVDQIGPAGLFF 348
G D+ +L S D ++L+ K LR V + I GL
Sbjct: 351 GHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRI--IRDRGLVL 408
Query: 349 PGDASGSVGVW 359
G ++ +W
Sbjct: 409 SGSDDSTIKIW 419
>sp|P0CS42|LIS1_CRYNJ Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PAC1 PE=3 SV=1
Length = 433
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 81 NTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI 140
+T N + L+GH +V++V L S SRD + VW SG C+ + AE
Sbjct: 175 DTANQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAE- 233
Query: 141 GCLISEGSWVFLGLPNAVKSWRVNAASVNALVV------NNDLLFAGSEGGVISVWKGTF 194
WV +P+ W V+A++ + + G E V
Sbjct: 234 --------WVREAVPSEDGRWLVSASNDQTSRIWDFSTGETKMELRGHEHVVECAVFAPV 285
Query: 195 VANP-FKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLK 253
A P +++A ++ P + DTR S A T + W+ + +C++TL
Sbjct: 286 NAYPAIRELAGLKPP-------APRDTRAKSPGVYAATGSRDKTIKLWDALSGQCLRTLV 338
Query: 254 GHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
GH + + +L+F +YL S+S D+TIK+W
Sbjct: 339 GHDNWIRALVFHPSGKYLLSASDDKTIKVW 368
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW----LYTHTK--- 287
T + W+ + + +TLKGH+ V + F + + S D T+K+W YT+ K
Sbjct: 128 TVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTANQYTNVKTLH 187
Query: 288 -NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPS 323
++ +SS+ M D E L S+ +D IR++++ S
Sbjct: 188 GHDHSVSSVRFMPDGE---TLVSASRDKTIRVWQVSS 221
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAEL 292
T R W + + C++T GH++ V + ++ +L S+S D+T +IW ++ + EL
Sbjct: 213 TIRVWQVSSGYCIKTFSGHAEWVREAVPSEDGRWLVSASNDQTSRIWDFSTGETKMEL 270
>sp|P0CS43|LIS1_CRYNB Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PAC1 PE=3 SV=1
Length = 433
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 81 NTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI 140
+T N + L+GH +V++V L S SRD + VW SG C+ + AE
Sbjct: 175 DTANQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAE- 233
Query: 141 GCLISEGSWVFLGLPNAVKSWRVNAASVNALVV------NNDLLFAGSEGGVISVWKGTF 194
WV +P+ W V+A++ + + G E V
Sbjct: 234 --------WVREAVPSEDGRWLVSASNDQTSRIWDFSTGETKMELRGHEHVVECAVFAPV 285
Query: 195 VANP-FKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLK 253
A P +++A ++ P + DTR S A T + W+ + +C++TL
Sbjct: 286 NAYPAIRELAGLKPP-------APRDTRAKSPGVYAATGSRDKTIKLWDALSGQCLRTLV 338
Query: 254 GHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
GH + + +L+F +YL S+S D+TIK+W
Sbjct: 339 GHDNWIRALVFHPSGKYLLSASDDKTIKVW 368
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW----LYTHTK--- 287
T + W+ + + +TLKGH+ V + F + + S D T+K+W YT+ K
Sbjct: 128 TVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTANQYTNVKTLH 187
Query: 288 -NNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPS 323
++ +SS+ M D E L S+ +D IR++++ S
Sbjct: 188 GHDHSVSSVRFMPDGE---TLVSASRDKTIRVWQVSS 221
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAEL 292
T R W + + C++T GH++ V + ++ +L S+S D+T +IW ++ + EL
Sbjct: 213 TIRVWQVSSGYCIKTFSGHAEWVREAVPSEDGRWLVSASNDQTSRIWDFSTGETKMEL 270
>sp|Q8MY12|MHCKC_DICDI Myosin heavy chain kinase C OS=Dictyostelium discoideum GN=mhkC
PE=1 SV=1
Length = 780
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 75/192 (39%), Gaps = 36/192 (18%)
Query: 110 KLYSGSRDGRVSVWDR-DSGRCVNVITNGAEIGCLISEGSW----VFLGLPNAVKSWRVN 164
+LYSGS DG++ VWD + N+ +G I +I + + G + VK W +N
Sbjct: 523 RLYSGSNDGQIGVWDAVELKHVTNIKAHGKSIRAVIKRPGFDQNILTAGADSLVKEWDIN 582
Query: 165 AAS----------VNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRAPLWFCSL 214
VN + + ++LL+ G + VW RA C++
Sbjct: 583 TQQTIKEIKESNEVNTIFIQDNLLYTGCNDKTVKVWDMRSYECVKTLSGHTRAIKSVCAM 642
Query: 215 -----SSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYL 269
S SND + WNL + +GH V +L + L
Sbjct: 643 GNLLFSGSNDQQ----------------IYVWNLATGTILTNFQGHEGWVKTLYAHNNML 686
Query: 270 FSSSLDETIKIW 281
+S S DETI+IW
Sbjct: 687 YSGSHDETIRIW 698
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 12/112 (10%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGS 148
L GH+ V L + +N LYSGS D + +WD + RCVN I + L
Sbjct: 666 LTNFQGHEGWVKT--LYAHNNMLYSGSHDETIRIWDLKTTRCVNTIKCKDRVETLHVTNQ 723
Query: 149 WVFLGLPNAVKSWR----VNAASVNA------LVVNNDLLFAGSEGGVISVW 190
+F G + ++ + N AS+N L N + LF GS + VW
Sbjct: 724 GIFAGSGDWLQVFSHDKYENLASLNTRSSILCLWRNQNQLFTGSLASNLKVW 775
>sp|Q54D08|LST8_DICDI Protein LST8 homolog OS=Dictyostelium discoideum GN=lst8 PE=1 SV=1
Length = 304
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 31/222 (13%)
Query: 83 TNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRC---------VNV 133
TN+ + M +GHK VT VG +Y+GS DG V +WD + C VN
Sbjct: 63 TNNNSPAMSFDGHKGNVTGVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRDYECSAPVNT 122
Query: 134 IT---NGAEIGCLISEGS---WVFLGLPNAVKSWRVNAASVNALVVNND--LLFAGSEGG 185
+ N AE+ GS W + + + + +L +++D L+ A + G
Sbjct: 123 VVLHPNQAELISGDQNGSIRVWDLISNTCSRELVPDGEVGITSLTISSDGGLVVASNTKG 182
Query: 186 VISVWK----GTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTW 241
VW+ T P +++ + AP+ S DT+ + A HT + W
Sbjct: 183 KCFVWRLGEDDTSRFEPLQKIEAHNAPILKTLFSP--DTKLLATCSA------DHTVKIW 234
Query: 242 NLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
N VQTL GH V F ++ YL + S D ++W
Sbjct: 235 NTKKFNVVQTLNGHQRWVWDCAFSNDSAYLVTGSSDHLSRLW 276
>sp|Q922B6|TRAF7_MOUSE E3 ubiquitin-protein ligase TRAF7 OS=Mus musculus GN=Traf7 PE=1
SV=1
Length = 594
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 93/248 (37%), Gaps = 50/248 (20%)
Query: 81 NTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI 140
+T + L GH V + L KLYSGS D + VWD + + VN I
Sbjct: 348 DTCTTYKCQKTLEGHDGIV--LALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNP 405
Query: 141 GC-LISEGSWVFLGLPNAVKSWRVNAAS-------------VNALVVNNDLLFAGSEGGV 186
C L+S + +F G A+K W + V ALV L++GS
Sbjct: 406 VCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-T 464
Query: 187 ISVWK-GTFVANPFKQVA-------SIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGH-- 236
I +W T Q + ++ C + W+ + + V GH
Sbjct: 465 IKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVG 524
Query: 237 -----------------------TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSS 273
+ R W++DN+ C QTL H +VT+L LFS +
Sbjct: 525 TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA 584
Query: 274 LDETIKIW 281
+D T+K+W
Sbjct: 585 VDSTVKVW 592
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 116/289 (40%), Gaps = 37/289 (12%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDR-DSGRCVNVITNGAEI-------GCLIS 145
GH+ V + + S + L+SGS D + VWD + +C + I GC +
Sbjct: 318 GHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLY 377
Query: 146 EGS-------WVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANP 198
GS W L V + R + V LV ++++LF+GS I VW
Sbjct: 378 SGSADCTIIVWDIQNL-QKVNTIRAHDNPVCTLVSSHNMLFSGSLKA-IKVWDIVGTELK 435
Query: 199 FKQVASIRAPLWFCSLSSSND-TRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSD 257
K+ L+ N R ++ ++ T + W++ L+C+ L+
Sbjct: 436 LKK-----------ELTGLNHWVRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVLQTSGG 484
Query: 258 TVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGMLDAEA------KPVLFSSG 311
+V S+ + ++ + + I +W + L+ G + A A + +FS+
Sbjct: 485 SVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSAS 544
Query: 312 KDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFFPGDASGSVGVW 359
D ++R++ + + + + R + V + + G F G +V VW
Sbjct: 545 YDRSLRVWSMDNM-ICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 592
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 17/92 (18%)
Query: 191 KGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWN-LDNLECV 249
KGTFV + + P+W + S D ++ + T + W+ +C
Sbjct: 313 KGTFVGH--------QGPVWCLCVYSMGDLLFSGSSDK--------TIKVWDTCTTYKCQ 356
Query: 250 QTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
+TL+GH V +L L+S S D TI +W
Sbjct: 357 KTLEGHDGIVLALCIQGCKLYSGSADCTIIVW 388
>sp|P0CS44|MDV1_CRYNJ Mitochondrial division protein 1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=MDV1 PE=3 SV=1
Length = 757
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 80/204 (39%), Gaps = 44/204 (21%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGS 148
M LNGH +T + L + +D V VWD + +G EIG L
Sbjct: 348 FMTLNGHTAPITALDFDEPYGMLVTAGQDDVVKVWD---------LCDGEEIGQL----- 393
Query: 149 WVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRAP 208
R + +V AL V + L G G + +W V + +++ + A
Sbjct: 394 -------------RGHRGTVKALQVEDTLCLTGGADGNVRLWDLRMVEDYEERLHTQLAE 440
Query: 209 LWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNL-----------DNLECVQTLKGHSD 257
L + D E+ A E H + L D CV+TL+GHS
Sbjct: 441 L------ARQDPLERIAEQRAHEEDGEHAEQDDELPDGTLQDPQPGDGSPCVRTLEGHSK 494
Query: 258 TVTSLLFWDEYLFSSSLDETIKIW 281
+VTSL + D L + S D+TI+ W
Sbjct: 495 SVTSLYYEDGCLVTGSSDKTIRQW 518
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
R W++ + +TL GH+ VT L F ++Y+ + SLD T++IW
Sbjct: 633 RMWDMRTGQAHRTLIGHTAPVTCLQFDEQYIVTGSLDRTVRIW 675
>sp|P0CS45|MDV1_CRYNB Mitochondrial division protein 1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=MDV1 PE=3 SV=1
Length = 757
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 80/204 (39%), Gaps = 44/204 (21%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGS 148
M LNGH +T + L + +D V VWD + +G EIG L
Sbjct: 348 FMTLNGHTAPITALDFDEPYGMLVTAGQDDVVKVWD---------LCDGEEIGQL----- 393
Query: 149 WVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRAP 208
R + +V AL V + L G G + +W V + +++ + A
Sbjct: 394 -------------RGHRGTVKALQVEDTLCLTGGADGNVRLWDLRMVEDYEERLHTQLAE 440
Query: 209 LWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNL-----------DNLECVQTLKGHSD 257
L + D E+ A E H + L D CV+TL+GHS
Sbjct: 441 L------ARQDPLERIAEQRAHEEDGEHAEQDDELPDGTLQDPQPGDGSPCVRTLEGHSK 494
Query: 258 TVTSLLFWDEYLFSSSLDETIKIW 281
+VTSL + D L + S D+TI+ W
Sbjct: 495 SVTSLYYEDGCLVTGSSDKTIRQW 518
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
R W++ + +TL GH+ VT L F ++Y+ + SLD T++IW
Sbjct: 633 RMWDMRTGQAHRTLIGHTAPVTCLQFDEQYIVTGSLDRTVRIW 675
>sp|Q0D0X6|LIS1_ASPTN Nuclear distribution protein nudF OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=nudF PE=3 SV=1
Length = 446
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 49/233 (21%)
Query: 71 HSWVHSVDGDNT------TNSLATLMKLNGHKKAVTNVG-LPSGSNKLYSGSRDGRVSVW 123
H+ + S GD T + A + L+GH +V+ V L S N L S SRD + +W
Sbjct: 171 HTLLASCSGDLTIKLWDPSKDYANIRTLHGHDHSVSAVRFLTSTENLLVSASRDASIRIW 230
Query: 124 DRDSGRCVNVITNGAEIGCLIS---EGSWVFLG-LPNAVKSWRVNAASVNALVVNND--- 176
D +G CV IT+ + +S +G W+ G AV W V++A A ++ +D
Sbjct: 231 DVSTGYCVRTITSNSIWFLDVSPSFDGKWLVAGGRDQAVTVWEVSSAEPRAALLGHDNDV 290
Query: 177 --LLFAGSEGGVISVWKGTFVANPFKQVASI----RAPLWFCSLSSSNDTRWNSKEEAAV 230
+FA ++ +A++ +APL + SSS S+++
Sbjct: 291 QCCVFAPPAS--------------YEYLATLAGHKKAPL---ASSSSEFIATGSRDK--- 330
Query: 231 FEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W ++TL GH + + L+F +YLFS S D+TI+ W
Sbjct: 331 ------TIKLWEARG-RLIKTLVGHDNWIRGLVFHPSGKYLFSVSDDKTIRCW 376
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE----YLFSSSLDETIKIWLYTHTKNNAEL 292
T + W+ + E +TLKGH V+ L F + L S S D TIK+W +K+ A +
Sbjct: 138 TIKIWDWELGELERTLKGHMRGVSGLDFGGQKGHTLLASCSGDLTIKLW--DPSKDYANI 195
Query: 293 SSLFG--------MLDAEAKPVLFSSGKDSAIRLYEL 321
+L G + +L S+ +D++IR++++
Sbjct: 196 RTLHGHDHSVSAVRFLTSTENLLVSASRDASIRIWDV 232
>sp|Q6Q0C0|TRAF7_HUMAN E3 ubiquitin-protein ligase TRAF7 OS=Homo sapiens GN=TRAF7 PE=1
SV=1
Length = 670
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 93/248 (37%), Gaps = 50/248 (20%)
Query: 81 NTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI 140
+T + L GH V + L KLYSGS D + VWD + + VN I
Sbjct: 424 DTCTTYKCQKTLEGHDGIV--LALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNP 481
Query: 141 GC-LISEGSWVFLGLPNAVKSWRVNAAS-------------VNALVVNNDLLFAGSEGGV 186
C L+S + +F G A+K W + V ALV L++GS
Sbjct: 482 VCTLVSSHNVLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQ-T 540
Query: 187 ISVWK-GTFVANPFKQVA-------SIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGH-- 236
I +W T Q + ++ C + W+ + + V GH
Sbjct: 541 IKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVG 600
Query: 237 -----------------------TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSS 273
+ R W++DN+ C QTL H +VT+L LFS +
Sbjct: 601 TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA 660
Query: 274 LDETIKIW 281
+D T+K+W
Sbjct: 661 VDSTVKVW 668
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 116/289 (40%), Gaps = 37/289 (12%)
Query: 94 GHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDR-DSGRCVNVITNGAEI-------GCLIS 145
GH+ V + + S + L+SGS D + VWD + +C + I GC +
Sbjct: 394 GHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLY 453
Query: 146 EGS-------WVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANP 198
GS W L V + R + V LV ++++LF+GS I VW
Sbjct: 454 SGSADCTIIVWDIQNL-QKVNTIRAHDNPVCTLVSSHNVLFSGSLKA-IKVWDIVGTELK 511
Query: 199 FKQVASIRAPLWFCSLSSSND-TRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSD 257
K+ L+ N R ++ ++ T + W++ L+C+ L+
Sbjct: 512 LKK-----------ELTGLNHWVRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVLQTSGG 560
Query: 258 TVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLFGMLDAEA------KPVLFSSG 311
+V S+ + ++ + + I +W + L+ G + A A + +FS+
Sbjct: 561 SVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSAS 620
Query: 312 KDSAIRLYELPSFKLRARIFSRREVEVDQIGPA-GLFFPGDASGSVGVW 359
D ++R++ + + + + R + V + + G F G +V VW
Sbjct: 621 YDRSLRVWSMDNM-ICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 17/92 (18%)
Query: 191 KGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWN-LDNLECV 249
KGTFV + + P+W + S D ++ + T + W+ +C
Sbjct: 389 KGTFVGH--------QGPVWCLCVYSMGDLLFSGSSDK--------TIKVWDTCTTYKCQ 432
Query: 250 QTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
+TL+GH V +L L+S S D TI +W
Sbjct: 433 KTLEGHDGIVLALCIQGCKLYSGSADCTIIVW 464
>sp|Q6S003|KIF8_DICDI Kinesin-related protein 8 OS=Dictyostelium discoideum GN=kif8 PE=2
SV=1
Length = 1873
Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 86/217 (39%), Gaps = 43/217 (19%)
Query: 92 LNGHKKAVTNVGL-PSGSNKLYSGSRDGRVSVWDRDSGRCV----------NVITNGAEI 140
NGH + + L + LYSG D + +WD +G + ++ NG+
Sbjct: 1504 FNGHDGGLLTLVLDEQNPSTLYSGGSDKNIKLWDLHTGDNMLDLSSPGPVRSLCINGSS- 1562
Query: 141 GCLISEGSWVFLGLPNAVKSWRVNA------------ASVNALVVNNDLLFAGSEGGVIS 188
GC+ S G+ VK W + + + VN LV + + +G E G
Sbjct: 1563 GCMFSGGA------ERTVKVWDIRSPGNTNLCIFKTPSDVNCLVTYGNYVVSGLENGTFK 1616
Query: 189 VWKGTFVANPFKQVASIRAPLWFCSLSSSNDTRW---NSKEEAAVFEFCGHTTRTWNLDN 245
VW + P K + S S +++ S++ HT ++ D+
Sbjct: 1617 VWDIRHMQKPLKTPLTTTPHHTGTIFSMSVTSKYLVTGSRD---------HTINLFHRDS 1667
Query: 246 LECVQTLKG-HSDTVTSLLFWDEYLFSSSLDETIKIW 281
Q L+ H D VTS+ D+ ++S S D TIK W
Sbjct: 1668 FVLAQKLQPPHHDGVTSIAVLDDVIYSGSRDRTIKRW 1704
Score = 32.3 bits (72), Expect = 5.5, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 254 GHSDTVTSLLFWDEYLFSSSLDETIKIW 281
GH +++ L E+LFS S D+ IKIW
Sbjct: 1844 GHESSISCLTSSKEFLFSGSTDKCIKIW 1871
>sp|Q93794|SEL10_CAEEL F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans
GN=sel-10 PE=1 SV=3
Length = 587
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 115/283 (40%), Gaps = 42/283 (14%)
Query: 64 GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
DK R+L + ++ + N + L GH+ V + + L +GS D + VW
Sbjct: 225 ADKSRYLRA--DKIEKNWNANPIMGSAVLRGHEDHVITC-MQIHDDVLVTGSDDNTLKVW 281
Query: 124 DRDSGRCVNVI---TNGAEIGCLISEGSWVFLGLPN-AVKSWRV-----------NAASV 168
D G + + T G + G ++ G + VK W + ++V
Sbjct: 282 CIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTV 341
Query: 169 NALVVNNDLLFAGSEGGVISVW---KGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSK 225
+ + +L GS + VW G +A A++R + + S
Sbjct: 342 RCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGG------ 395
Query: 226 EEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLY 283
++F T + WN C++TL GH++ V SLLF E + S SLD +I++W +
Sbjct: 396 -----YDF---TVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF 447
Query: 284 THTKNNAELSSLFGMLDAEA-----KPVLFSSGKDSAIRLYEL 321
T + ++ L G + +L S DS +R++++
Sbjct: 448 TRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDI 490
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 121/283 (42%), Gaps = 51/283 (18%)
Query: 24 SDDDDLMKGRAEEREEMFGF-----GLAAMAIRVCNNWISDSCVYGDKCRFLHSWVHSVD 78
SDD+ L ++ E M+ G+ I C +I V G R + W +VD
Sbjct: 273 SDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYI----VSGSTDRTVKVW-STVD 327
Query: 79 GDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NG 137
G + L L GH V + + + L +GSRD + VWD +SGR + + +
Sbjct: 328 G-------SLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLHGHH 378
Query: 138 AEIGCLISEGSWVFLGLPN-AVKSWRVNAA-SVNALVVNND----LLF--------AGSE 183
A + C+ +G+ V G + VK W + + L +N+ LLF +GS
Sbjct: 379 AAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSL 438
Query: 184 GGVISVWKGTFVANPFKQ--VASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTT--R 239
I VW T P Q VA ++ SL+S R N + C + R
Sbjct: 439 DTSIRVWDFT---RPEGQECVALLQG---HTSLTSGMQLRGN------ILVSCNADSHVR 486
Query: 240 TWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDE-TIKIW 281
W++ CV L GH +TSL ++ + ++S D+ T+K+W
Sbjct: 487 VWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW 529
>sp|Q4P9P9|LIS1_USTMA Nuclear distribution protein PAC1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=PAC1 PE=3 SV=1
Length = 453
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 17/206 (8%)
Query: 81 NTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI 140
+ N + L GH +V++V G + + S SRD + +W+ +G C + AE
Sbjct: 192 DANNDYKNIKTLQGHDHSVSSVRFLPGDDYIVSASRDKTIKIWEFSTGFCTKTLQGHAE- 250
Query: 141 GCLISEGSWVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFK 200
WV +P+ W V+ ++ V + + +G + + F
Sbjct: 251 --------WVRSAIPSDDAKWLVSCSTDQTARVWD--VSSGETKVELRGHEHVVEVAIFA 300
Query: 201 QVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCG---HTTRTWNLDNLECVQTLKGHSD 257
VAS A SL N ++ S A F G T R W+ + +C++TL GH +
Sbjct: 301 PVASYAAIRQLASL-DPNASKDASASMAGQFVATGSRDKTIRIWDSISGQCLKTLTGHDN 359
Query: 258 TVTSLLFWD--EYLFSSSLDETIKIW 281
V L F + L S S D+T+++W
Sbjct: 360 WVRGLAFSPNGKSLLSVSDDKTMRLW 385
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
Query: 239 RTWNLDN-LECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIWLYT 284
+ W+ +N + ++TL+GH +V+S+ F D+Y+ S+S D+TIKIW ++
Sbjct: 189 KVWDANNDYKNIKTLQGHDHSVSSVRFLPGDDYIVSASRDKTIKIWEFS 237
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 41/206 (19%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSG---RCVNVITNGAEIGCLISEGS 148
+ GH+ VT V +++ S S D V +WD ++G R + T + S+G+
Sbjct: 118 MQGHRLPVTKVSFHPVFSQIASASEDTTVKLWDWETGDFERTLKGHTKAVQDVDFDSKGN 177
Query: 149 WVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRAP 208
+V L ++DL I VW N +K + +++
Sbjct: 178 YV--------------------LSCSSDL--------SIKVWDAN---NDYKNIKTLQG- 205
Query: 209 LWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDE- 267
S + R+ ++ V T + W C +TL+GH++ V S + D+
Sbjct: 206 ----HDHSVSSVRFLPGDDYIVSASRDKTIKIWEFSTGFCTKTLQGHAEWVRSAIPSDDA 261
Query: 268 -YLFSSSLDETIKIWLYTHTKNNAEL 292
+L S S D+T ++W + + EL
Sbjct: 262 KWLVSCSTDQTARVWDVSSGETKVEL 287
>sp|Q19124|A16L1_CAEEL Autophagic-related protein 16.1 OS=Caenorhabditis elegans
GN=atg-16.1 PE=3 SV=1
Length = 578
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLLFWDEY-LFSSSLDETIKIWLYTHTKNNAELSSLFG 297
R WNLDN + TL GHSD VT + F+ + S S D IKIW + + + L
Sbjct: 361 RIWNLDNSRLLSTLSGHSDQVTCVKFYQSHSAVSGSADRVIKIWDIQNQRCSRSLFPASK 420
Query: 298 MLDAE----AKPVLFSSGK-DSAIRLYE 320
+LD A P LF+SG D +R Y+
Sbjct: 421 VLDVATNMGASPSLFASGHFDKKLRFYD 448
>sp|Q00664|LIS1_EMENI Nuclear distribution protein nudF OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=nudF PE=1 SV=1
Length = 444
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 81 NTTNSLATLMKLNGHKKAVTNVG-LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE 139
+ + A + L+GH +V++V L S N L S SRDG + +WD +G CV VI + E
Sbjct: 186 DPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATE 245
Query: 140 IGCL-IS---EGSWVFL-GLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTF 194
+S +G W+ G A+ W V++A A ++ ++ V+
Sbjct: 246 SWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIE------CCVFAPPA 299
Query: 195 VANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKG 254
+A ++ P + SS ++++ T + W ++TL G
Sbjct: 300 SYEHLATLAGLKKPP--PATSSCEFVATGARDK---------TIKLWEARG-RLIKTLHG 347
Query: 255 HSDTVTSLLFWD--EYLFSSSLDETIKIW 281
H + V L+F +YLFS S D+TI+ W
Sbjct: 348 HDNWVRGLVFHPGGKYLFSVSDDKTIRCW 376
>sp|Q61FW2|SEL10_CAEBR F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis
briggsae GN=sel-10 PE=3 SV=1
Length = 589
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 42/256 (16%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISE----G 147
L GH++ V + ++ L +GS D + VW D G + + NG G S+ G
Sbjct: 253 LRGHEEHVITC-MQIHNDLLVTGSDDNTLKVWSIDDGEVKHTL-NGHSGGVWTSQISQCG 310
Query: 148 SWVFLGLPN-AVKSWRV-----------NAASVNALVVNNDLLFAGSEGGVISVW---KG 192
++ G + VK WR + ++V + + N L GS + VW G
Sbjct: 311 RYIVSGSTDRTVKVWRAEDGFLLHTLQGHTSTVRCMAMANTTLVTGSRDCTLRVWDIETG 370
Query: 193 TFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTL 252
V A++R + ++ S ++F T + W+ + +C++TL
Sbjct: 371 LHVRTLQGHQAAVRCVQFDGNIVVSGG-----------YDF---TVKIWDAFSGKCLRTL 416
Query: 253 KGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELSSLFGMLDAEA-----KP 305
GHS+ V SLL+ E + S SLD +I++W ++ + ++ L G +
Sbjct: 417 IGHSNRVYSLLYESERSIVCSGSLDTSIRVWDFSRPEGQELIAFLSGHTSLTSGMQLRGN 476
Query: 306 VLFSSGKDSAIRLYEL 321
+L S DS +R++++
Sbjct: 477 ILVSCNADSHVRVWDI 492
Score = 39.7 bits (91), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEG 147
L L GH V + + + L +GSRD + VWD ++G V + + A + C+ +G
Sbjct: 333 LHTLQGHTSTVRCMAM--ANTTLVTGSRDCTLRVWDIETGLHVRTLQGHQAAVRCVQFDG 390
Query: 148 SWVFLGLPN-AVKSWRV-----------NAASVNALVVNND--LLFAGSEGGVISVWKGT 193
+ V G + VK W ++ V +L+ ++ ++ +GS I VW
Sbjct: 391 NIVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVWD-- 448
Query: 194 FVANPFKQ--VASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTT--RTWNLDNLECV 249
+ P Q +A + SL+S R N + C + R W++ C+
Sbjct: 449 -FSRPEGQELIAFLSG---HTSLTSGMQLRGN------ILVSCNADSHVRVWDIYEGTCI 498
Query: 250 QTLKGHSDTVTSLLFWDEYLFSSSLDE-TIKIW 281
L GH +TSL ++ L ++S D+ ++K+W
Sbjct: 499 HILSGHRSAITSLQWFGRGLVATSSDDGSVKLW 531
Score = 39.7 bits (91), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 27/213 (12%)
Query: 168 VNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSK-E 226
+ + ++NDLL GS+ + VW SI +L+ + W S+
Sbjct: 261 ITCMQIHNDLLVTGSDDNTLKVW-------------SIDDGEVKHTLNGHSGGVWTSQIS 307
Query: 227 EAAVFEFCGHTTRT---WNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW-- 281
+ + G T RT W ++ + TL+GH+ TV + + L + S D T+++W
Sbjct: 308 QCGRYIVSGSTDRTVKVWRAEDGFLLHTLQGHTSTVRCMAMANTTLVTGSRDCTLRVWDI 367
Query: 282 ---LYTHTKNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFK-LRARI-FSRREV 336
L+ T + + D ++ S G D +++++ S K LR I S R
Sbjct: 368 ETGLHVRTLQGHQAAVRCVQFDGN---IVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVY 424
Query: 337 EVDQIGPAGLFFPGDASGSVGVWKWLLAEQQKM 369
+ + G S+ VW + E Q++
Sbjct: 425 SLLYESERSIVCSGSLDTSIRVWDFSRPEGQEL 457
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 40/264 (15%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI---TNGAEIGCLIS 145
L L GH V V L SGS D V +WD S +C+ ++ T+
Sbjct: 1151 LYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNP 1210
Query: 146 EGSWVFLGLPN-AVKSWRVNAAS-----------VNALVVNND--LLFAGSEGGVISVWK 191
+GS + G + V+ W +N++ VN++V N D +L +GS + +W
Sbjct: 1211 DGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLW- 1269
Query: 192 GTFVANPFKQVASIRAPLWFCSLSS-SNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQ 250
++S + F ++ N +N T R W + + +C+
Sbjct: 1270 ---------DISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLH 1320
Query: 251 TLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW-------LYTHTKNNAELSSLFGMLDA 301
T +GH+ V+S+ F + L S S D+T+++W LYT + + S+ D
Sbjct: 1321 TFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDG 1380
Query: 302 EAKPVLFSSGKDSAIRLYELPSFK 325
+L S D +RL+ + S K
Sbjct: 1381 ---AILASGSGDQTVRLWSISSGK 1401
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 60/271 (22%)
Query: 84 NSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCL 143
NS L GH V +V + L SGS D V +WD S +C++
Sbjct: 1230 NSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLH----------- 1278
Query: 144 ISEGSWVFLGLPNAVKSWRVNAASVNALVVNND--LLFAGSEGGVISVWK--GTFVANPF 199
F G N W VN++ N D +L +GS + +W+ + + F
Sbjct: 1279 ------TFQGHTN----W------VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTF 1322
Query: 200 KQVASIRAPLWFCSLSSSND-TRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDT 258
+ S W S++ S D T S + T R W++ + EC+ T GH++
Sbjct: 1323 QGHTS-----WVSSVTFSPDGTMLASGSD-------DQTVRLWSISSGECLYTFLGHTNW 1370
Query: 259 VTSLLFWDE--YLFSSSLDETIKIW-------LYTHTKNNAELSSLFGMLDAEAKPVLFS 309
V S++F + L S S D+T+++W LYT +N + S+ D +L S
Sbjct: 1371 VGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDG---TLLAS 1427
Query: 310 SGKDSAIRLYELPS----FKLRARIFSRREV 336
D +RL+ + S + L I S R V
Sbjct: 1428 GSDDQTVRLWNISSGECLYTLHGHINSVRSV 1458
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 50/246 (20%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEG 147
L+ GH V +VG L SGS D V +WD SG+C+ + + + ++
Sbjct: 899 LLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSP 958
Query: 148 SWVFLGLPNAVKSWRV-NAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIR 206
+ + L ++ ++ R+ + +S L + F G G V SV F S+
Sbjct: 959 NSLMLASGSSDQTVRLWDISSGECLYI-----FQGHTGWVYSV--------AFNLDGSML 1005
Query: 207 APLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWD 266
A + S D T R W++ + +C +GH+ V S++F
Sbjct: 1006 A-------TGSGD----------------QTVRLWDISSSQCFYIFQGHTSCVRSVVFSS 1042
Query: 267 E--YLFSSSLDETIKIW-------LYTHTKNNAELSSLFGMLDAEAKPVLFSSGKDSAIR 317
+ L S S D+T+++W LYT + + + S+ D +L S G D +R
Sbjct: 1043 DGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDG---AMLASGGDDQIVR 1099
Query: 318 LYELPS 323
L+++ S
Sbjct: 1100 LWDISS 1105
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 139/337 (41%), Gaps = 83/337 (24%)
Query: 67 CRFLHSWVHSV----DG-------DNTTNSL------ATLMKLNGHKKAVTNVGLPSGSN 109
C+ +SWV+SV DG D+ T L L GH V +V S
Sbjct: 902 CKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSL 961
Query: 110 KLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLIS-----EGSWVFLGLPN-AVKSWRV 163
L SGS D V +WD SG C+ + G + S +GS + G + V+ W +
Sbjct: 962 MLASGSSDQTVRLWDISSGECLYIFQ--GHTGWVYSVAFNLDGSMLATGSGDQTVRLWDI 1019
Query: 164 NAAS-----------VNALVVNND--LLFAGSEGGVISVW---KGTFVANPFKQVASIRA 207
+++ V ++V ++D +L +GS+ + +W G + + +R+
Sbjct: 1020 SSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRS 1079
Query: 208 PLWF---CSLSSSNDTR----WNSKEEAAVFEFCGHTT---------------------- 238
++ L+S D + W+ ++ G+T+
Sbjct: 1080 VVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQI 1139
Query: 239 -RTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW-------LYTHTKN 288
R W++ + +C+ TL+GH++ V ++ F + L S S D+T+++W LY +
Sbjct: 1140 VRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGH 1199
Query: 289 NAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFK 325
+ ++S+ D L S D +RL+E+ S K
Sbjct: 1200 TSWVNSVVFNPDGST---LASGSSDQTVRLWEINSSK 1233
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
L L+GH +V +V S L SGS D + +WD +G C+ +
Sbjct: 1445 LYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTL 1490
Score = 32.0 bits (71), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 55/216 (25%)
Query: 72 SWVHSVDGDNTT-----NSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRD 126
S + S GD T +S L GH V++V L SGS D V +W
Sbjct: 1297 SMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSIS 1356
Query: 127 SGRCVNVI---TN--GAEI----GCLISEGSWVFLGLPNAVKSWRVNAAS---------- 167
SG C+ TN G+ I G +++ GS V+ W +++
Sbjct: 1357 SGECLYTFLGHTNWVGSVIFSPDGAILASGSG-----DQTVRLWSISSGKCLYTLQGHNN 1411
Query: 168 -VNALVVNND--LLFAGSEGGVISVWK---GTFVANPFKQVASIRAPLWFCS----LSSS 217
V ++V + D LL +GS+ + +W G + + S+R+ + F S L+S
Sbjct: 1412 WVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRS-VAFSSDGLILASG 1470
Query: 218 NDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLK 253
+D T + W++ EC++TLK
Sbjct: 1471 SD---------------DETIKLWDVKTGECIKTLK 1491
>sp|O14170|POP2_SCHPO WD repeat-containing protein pop2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pop2 PE=1 SV=1
Length = 703
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 100/257 (38%), Gaps = 52/257 (20%)
Query: 91 KLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI-GCLISEGSW 149
+L GHK+ V V + N L SGS D V VW+ + +C ++ I CL
Sbjct: 386 RLEGHKEGVWAVKI--HENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCL------ 437
Query: 150 VFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRAPL 209
+ R+ V + + + +GS + VWK + P
Sbjct: 438 ------EILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWK----------LPKNTDPP 481
Query: 210 WFCSLSSSNDTRWNSKEEAAVFEFCGHT---------------------TRTWNLDNLEC 248
+ ++S D RW K V GHT R W + EC
Sbjct: 482 YLPDNTNSID-RW-EKNPYFVHTLIGHTDSVRTISGYGDILVSGSYDSSIRIWRVSTGEC 539
Query: 249 VQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW-LYTHT-KNNAELSSLFGMLDAEAK 304
+ L+GHS + S+L+ E S S+D++I++W L T T K E F L +
Sbjct: 540 LYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQ 599
Query: 305 PVLFSSGKDSAIRLYEL 321
L S DS IR+++L
Sbjct: 600 NRLISGSADSTIRIWDL 616
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 33/159 (20%)
Query: 143 LISEGSWVFLGLPNAVKSWRVNAAS--VNALVVNNDLLFAGSEGGVISVWKGTFVANPFK 200
++ W+F +P + S+ ++ + + +L+++ D + S G I + N
Sbjct: 327 FLNRKRWLFPSIPPSHLSFPIHVPNFMITSLLLHKDRIITTSGSGTIQI------HNAIT 380
Query: 201 QVASIRAPLWFCSLSSSNDTRWNSK--EEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDT 258
V R L + W K E V T R WN++ +C +GH
Sbjct: 381 GVLEAR-------LEGHKEGVWAVKIHENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISI 433
Query: 259 VTSLLFW----------------DEYLFSSSLDETIKIW 281
+ L Y+ S S D T+++W
Sbjct: 434 IRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVW 472
>sp|Q9VZF4|FBXW7_DROME F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster
GN=ago PE=1 SV=1
Length = 1326
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 42/175 (24%)
Query: 109 NKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEGSWVFLGLPNA-VKSWRVNAA 166
N + SGS D + VWD DSG CV+ + + + + C+ GS V G +A ++ W +
Sbjct: 1046 NIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIE-- 1103
Query: 167 SVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKE 226
+G + V G +A++R + L S
Sbjct: 1104 ----------------QGSCLHVLVG--------HLAAVRCVQYDGKLIVS--------- 1130
Query: 227 EAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
+++ + W+ + EC+ TL+GH++ V SL F ++ S SLD +I++W
Sbjct: 1131 --GAYDY---MVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVW 1180
>sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1
SV=1
Length = 629
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 128/331 (38%), Gaps = 59/331 (17%)
Query: 75 HSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
H +D + L + L GH V L N++ SGS D + VW +G+C+ +
Sbjct: 281 HRIDTNWRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL 339
Query: 135 --------TNGAEIGCLISEGSWVFLGLPNA-----VKSWRVNAASVNALVVNNDLLFAG 181
++ +IS + L + NA + + + ++V + ++ + +G
Sbjct: 340 VGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG 399
Query: 182 SEGGVISVW---KGTFVANPFKQVASIRAPLWFCS--LSSSND---TRWNSKEEAAVFEF 233
S + VW G + VA++R + +S + D W+ + E +
Sbjct: 400 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 459
Query: 234 CGHT---------------------TRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSS 272
GHT R W+++ C+ TL GH + + D L S
Sbjct: 460 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSG 519
Query: 273 SLDETIKIWLYTHTKNNAELSSLFGMLDAEA--------KPVLFSSGKDSAIRLYELPSF 324
+ D T+KIW K L +L G ++ K + +S D ++L++L +
Sbjct: 520 NADSTVKIW---DIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 576
Query: 325 KLRARIFSRREVEVDQIGPAGLFFPGDASGS 355
+ F R V ++ G G+ + AS +
Sbjct: 577 E-----FIRNLVTLESGGSGGVVWRIRASNT 602
>sp|B8P4B0|LIS11_POSPM Nuclear distribution protein PAC1-1 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-1 PE=3 SV=1
Length = 438
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 37/202 (18%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVF 151
L GH+ V+ V G + + S SRD + +W+ + C+ +IT + WV
Sbjct: 192 LRGHEHTVSTVKFLPGDDLIASASRDKTIRIWEVATTFCIRMITGHED---------WVR 242
Query: 152 LGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGT--FVANPFKQVASIRAPL 209
+ +P+ + LL + S VW T + F+ I +
Sbjct: 243 MTVPS----------------TDGTLLGSCSSDNTARVWDPTSGVMKMEFRGHGHIVEVI 286
Query: 210 WFCSLSSSNDTRWNSKEEAAVFEFCGH--------TTRTWNLDNLECVQTLKGHSDTVTS 261
F L+S R + +AA + T + W++ + + ++TL GH+D +
Sbjct: 287 AFAPLASYAAIRELAGLKAATKAPGAYIATGSRDKTVKIWDVHSGQELRTLSGHNDWIRG 346
Query: 262 LLFWD--EYLFSSSLDETIKIW 281
L+F ++L S+S D+TI++W
Sbjct: 347 LVFHPSGKHLLSASDDKTIRVW 368
Score = 32.0 bits (71), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE-IGCL 143
L L+GH + + L S S D + VW+ +GRC+ V+ + I CL
Sbjct: 334 LRTLSGHNDWIRGLVFHPSGKHLLSASDDKTIRVWELSTGRCMKVVEAHSHFITCL 389
>sp|Q969H0|FBXW7_HUMAN F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1
SV=1
Length = 707
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 128/331 (38%), Gaps = 59/331 (17%)
Query: 75 HSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVI 134
H +D + L + L GH V L N++ SGS D + VW +G+C+ +
Sbjct: 359 HRIDTNWRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL 417
Query: 135 --------TNGAEIGCLISEGSWVFLGLPNA-----VKSWRVNAASVNALVVNNDLLFAG 181
++ +IS + L + NA + + + ++V + ++ + +G
Sbjct: 418 VGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG 477
Query: 182 SEGGVISVW---KGTFVANPFKQVASIRAPLWFCS--LSSSND---TRWNSKEEAAVFEF 233
S + VW G + VA++R + +S + D W+ + E +
Sbjct: 478 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 537
Query: 234 CGHTTRT---------------------WNLDNLECVQTLKGHSDTVTSLLFWDEYLFSS 272
GHT R W+++ C+ TL GH + + D L S
Sbjct: 538 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSG 597
Query: 273 SLDETIKIWLYTHTKNNAELSSLFGMLDAEA--------KPVLFSSGKDSAIRLYELPSF 324
+ D T+KIW K L +L G ++ K + +S D ++L++L +
Sbjct: 598 NADSTVKIW---DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 654
Query: 325 KLRARIFSRREVEVDQIGPAGLFFPGDASGS 355
+ F R V ++ G G+ + AS +
Sbjct: 655 E-----FIRNLVTLESGGSGGVVWRIRASNT 680
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 88 TLMK-LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISE 146
TL+K + GH++ V NV L S S D + +WD SG+ + +T G G +
Sbjct: 1146 TLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLT-GHSAGVITVR 1204
Query: 147 GSWVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIR 206
S + + AGSE + +W +Q +
Sbjct: 1205 FS------------------------PDGQTIAAGSEDKTVKLWH--------RQDGKLL 1232
Query: 207 APL-----WFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTS 261
L W SLS S D + + A T + W + + + V+TLKGH+D+V
Sbjct: 1233 KTLNGHQDWVNSLSFSPDGKTLASASA------DKTIKLWRIADGKLVKTLKGHNDSVWD 1286
Query: 262 LLFWDE--YLFSSSLDETIKIW------LYTHTKNNAELSSLFGMLDAEAKPVLFSSGKD 313
+ F + + S+S D TIK+W L T T ++ + ++ + D+ ++ S+ D
Sbjct: 1287 VNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSN---IIASASLD 1343
Query: 314 SAIRLYELP 322
+ IRL++ P
Sbjct: 1344 NTIRLWQRP 1352
Score = 38.9 bits (89), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 84/216 (38%), Gaps = 41/216 (18%)
Query: 91 KLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE----------I 140
+L GHK V ++ + + SGS D + +W RD GR + NG E
Sbjct: 1067 RLEGHKDGVISISISRDGQTIASGSLDKTIKLWSRD-GRLFRTL-NGHEDAVYSVSFSPD 1124
Query: 141 GCLISEGSWVFLGLPNAVKSWRVNAASV------NALVVNNDL-------LFAGSEGGVI 187
G I+ G G +K W+ + ++ + VNN L + S I
Sbjct: 1125 GQTIASG-----GSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSI 1179
Query: 188 SVWKGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLE 247
+W T + A + S T E+ T + W+ + +
Sbjct: 1180 KLWDTT-SGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDK--------TVKLWHRQDGK 1230
Query: 248 CVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIW 281
++TL GH D V SL F + L S+S D+TIK+W
Sbjct: 1231 LLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLW 1266
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 80/213 (37%), Gaps = 32/213 (15%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT--NGAEIGCLISE 146
L GH V V SN + S S D + +W R + V+ +G + +
Sbjct: 1315 LETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHD 1374
Query: 147 GSWVFL-GLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASI 205
GS + G ++ W S+ + N ++ G+ +G +A+ A
Sbjct: 1375 GSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIY-----GISFTPQGDLIASAN---ADK 1426
Query: 206 RAPLWFCSLSSSNDTRWNSKEEAAVFEFCG-----------HTTRTWNLDNLECVQTLKG 254
+W + T E F +T + WN+ + + +TLKG
Sbjct: 1427 TVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKG 1486
Query: 255 HSDTVTSLLFWDEY------LFSSSLDETIKIW 281
H+D V FW + + S+S D+TI++W
Sbjct: 1487 HTDEV----FWVSFSPDGKIIASASADKTIRLW 1515
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 68/199 (34%), Gaps = 44/199 (22%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGS 148
L L GH V V L S SRD V +W+ G+ + + E
Sbjct: 1439 LKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTD------EVF 1492
Query: 149 WVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRAP 208
WV + + ++ + S I +W +F N K
Sbjct: 1493 WV-------------------SFSPDGKIIASASADKTIRLWD-SFSGNLIK-------- 1524
Query: 209 LWFCSLSSSND----TRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLF 264
SL + ND +N T + W + + T GHS+ V S F
Sbjct: 1525 ----SLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSF 1580
Query: 265 WDE--YLFSSSLDETIKIW 281
+ Y+ S+S D+T+KIW
Sbjct: 1581 SPDGRYIASASEDKTVKIW 1599
>sp|Q01277|SCONB_NEUCR Probable E3 ubiquitin ligase complex SCF subunit scon-2
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=scon-2 PE=1 SV=1
Length = 650
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
T + WN++ EC++TL GH+ + +L F D L S SLD TIK+W
Sbjct: 315 TIKIWNIETEECIRTLVGHTAGIRALQFDDSKLISGSLDHTIKVW 359
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 30/165 (18%)
Query: 168 VNALVVNNDLLFAGSEGGVISVWK---GTFVANPFKQVASIRAPLWFCSLSSSNDTRWNS 224
V L +++++L GS I +W + A IRA L F +D++ S
Sbjct: 297 VTCLQLDDNILATGSYDTTIKIWNIETEECIRTLVGHTAGIRA-LQF------DDSKLIS 349
Query: 225 KEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYT 284
HT + WN EC+ T H+D+V S+ F L S S D+T+KI+ +
Sbjct: 350 GS-------LDHTIKVWNWHTGECLSTFAAHTDSVISVHFDGHLLASGSSDKTVKIFDF- 401
Query: 285 HTKNNAELSSLFG--------MLDAEAKPVLFSSGKDSAIRLYEL 321
N+ E L G +D +++ V FS+ D+ I+L++L
Sbjct: 402 ---NSKETYCLKGHSDWVNSTHVDIKSRTV-FSASDDTTIKLWDL 442
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 28/213 (13%)
Query: 62 VYGDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVS 121
VY D+ + ++W NS L L GH+ VT + L N L +GS D +
Sbjct: 269 VYRDRWQVSYNW---------KNSRYKLSVLKGHENGVTCLQL--DDNILATGSYDTTIK 317
Query: 122 VWDRDSGRCV-NVITNGAEIGCLISEGSWVFLG-LPNAVKSWRVNAASVNALVVNNDLLF 179
+W+ ++ C+ ++ + A I L + S + G L + +K W + + F
Sbjct: 318 IWNIETEECIRTLVGHTAGIRALQFDDSKLISGSLDHTIKVWNWHTGECLST-------F 370
Query: 180 AGSEGGVISV-WKGTFVA----NPFKQVASIRAPLWFCSLSSS---NDTRWNSKEEAAVF 231
A VISV + G +A + ++ + +C S N T + K
Sbjct: 371 AAHTDSVISVHFDGHLLASGSSDKTVKIFDFNSKETYCLKGHSDWVNSTHVDIKSRTVFS 430
Query: 232 EFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLF 264
T + W+LD + ++T +GH V +L
Sbjct: 431 ASDDTTIKLWDLDTRQVIRTYEGHVGHVQQVLI 463
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 249 VQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
+ LKGH + VT L D L + S D TIKIW
Sbjct: 287 LSVLKGHENGVTCLQLDDNILATGSYDTTIKIW 319
>sp|A9V790|LIS1_MONBE Lissencephaly-1 homolog OS=Monosiga brevicollis GN=35260 PE=3 SV=1
Length = 410
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLDETIKIW 281
T + WN+DN C +TL GH TV+S+ F + +FS+S D+TIKIW
Sbjct: 171 TIKVWNMDNFTCTKTLSGHDHTVSSVRFDHTGDRVFSASRDKTIKIW 217
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 95/223 (42%), Gaps = 34/223 (15%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLI---SEGS 148
L+GH V++V ++++S SRD + +W+ +G C+ + ++ I ++G+
Sbjct: 186 LSGHDHTVSSVRFDHTGDRVFSASRDKTIKIWELATGYCLQTLQGHSDWVRSIDVSADGA 245
Query: 149 WVFLGLP-NAVKSWRVNA----------------ASVNALVVNN--DLLFAGSEGGVISV 189
W+ + V+ W V + AS LV + +L+ GS+ +
Sbjct: 246 WICSASSDHTVRVWSVASGECKHVWSDHEHVVEHASFAPLVAHEALNLMIFGSKPSAEAA 305
Query: 190 WKGTFVANPFKQVA----SIRAPLWFCSLSSSND----TRWNSKEEAAVFEFC-GHTTRT 240
KG FVA+ + + + L+ ++ T W S+ +F T R
Sbjct: 306 SKGPFVASASRDKSICLFDVSTGQHLARLTGHDNWVRATAW-SRGGRYLFSVADDKTMRV 364
Query: 241 WNLDNLECVQTLKGHSDTVTSLLFW--DEYLFSSSLDETIKIW 281
W++ +T+ H+ V+ + + ++ + S+D +K+W
Sbjct: 365 WDIATKRVSKTIPAHNHFVSCIAVHAKNTHVVTGSVDLKVKVW 407
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 88/239 (36%), Gaps = 48/239 (20%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVF 151
L GH AV ++ N+L S S D + VW+ D+ C ++
Sbjct: 144 LKGHTNAVNDIAYDREGNRLVSCSTDMTIKVWNMDNFTCTKTLS---------------- 187
Query: 152 LGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRAPLWF 211
G + V S R + D +F+ S I +W+ +A + W
Sbjct: 188 -GHDHTVSSVRFDH--------TGDRVFSASRDKTIKIWE---LATGYCLQTLQGHSDWV 235
Query: 212 CSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFS 271
S+ S D W + HT R W++ + EC H V F
Sbjct: 236 RSIDVSADGAWICSASS------DHTVRVWSVASGECKHVWSDHEHVVEHASF-----AP 284
Query: 272 SSLDETIKIWLYTHTKNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYELPSFKLRARI 330
E + + ++ +K +AE +S P + S+ +D +I L+++ + + AR+
Sbjct: 285 LVAHEALNLMIFG-SKPSAEAAS--------KGPFVASASRDKSICLFDVSTGQHLARL 334
>sp|A7S338|LIS1_NEMVE Lissencephaly-1 homolog OS=Nematostella vectensis GN=v1g242515 PE=3
SV=1
Length = 409
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 93/240 (38%), Gaps = 63/240 (26%)
Query: 89 LMKLNGHKKAVTNVG-LPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEG 147
+ L+GH V+++ LPSG + L S SRD + +W+ +G CV G
Sbjct: 183 IRTLHGHDHNVSSISFLPSG-DHLVSASRDKTIKMWEIATGYCVKTFQG---------HG 232
Query: 148 SWVFLGLPNA-------------VKSWRVNAASVNALVVNNDLLF--------------- 179
WV PNA ++ W V + + ++D +
Sbjct: 233 EWVRRVRPNADGSLIASCSNDQTIRVWVVASRECKCDLRDHDHVIEDLNWAPESATPVIN 292
Query: 180 --AGSEGGVISVWKGTFVANPFKQVASIRAPLW-----FCSLSSSNDTRWNSKEEAAVFE 232
AG EGG ++ G F+ + + SI+ +W C ++ W A +F
Sbjct: 293 EAAGVEGGKKAMSPGPFLVSASRD-KSIK--IWDVSAGVCLVTLVGHDNW---VRAVMFH 346
Query: 233 FCG---------HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLF--SSSLDETIKIW 281
G T R W+ N C +TL H VT+L F F + S+D T+K+W
Sbjct: 347 PGGKFIVSCSDDKTLRIWDYKNKRCAKTLVAHEHFVTTLDFHKSAPFVATGSVDLTLKVW 406
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
T + W+ EC++TL GH V+S+ F ++L S+S D+TIK+W
Sbjct: 171 TIKLWDFQGFECIRTLHGHDHNVSSISFLPSGDHLVSASRDKTIKMW 217
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 18/97 (18%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLF--WDEYLFSSSLDETIKIW----------LYT 284
T + W+ + + +TLKGH+D V L F ++L SSS D TIK+W L+
Sbjct: 129 TVKVWDYETGDFERTLKGHTDAVQDLAFDHTGKFLASSSADMTIKLWDFQGFECIRTLHG 188
Query: 285 HTKNNAELSSLFGMLDAEAKPVLFSSGKDSAIRLYEL 321
H N + +S L + L S+ +D I+++E+
Sbjct: 189 HDHNVSSISFL------PSGDHLVSASRDKTIKMWEI 219
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 251 TLKGHSDTVTSLLFWDEY--LFSSSLDETIKIWLYTHTKNNAELSSLFGMLDA------- 301
TL GH +T +LF Y + +SS D T+K+W Y + +L G DA
Sbjct: 101 TLTGHRSPITKVLFHPVYSVMVTSSEDATVKVWDY---ETGDFERTLKGHTDAVQDLAFD 157
Query: 302 EAKPVLFSSGKDSAIRLYELPSFK 325
L SS D I+L++ F+
Sbjct: 158 HTGKFLASSSADMTIKLWDFQGFE 181
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 10/203 (4%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCV-NVITNGAEIGCLIS-- 145
+ L GH + ++ + N++ +GS D V+VW+ D+GR V +I + AEI +
Sbjct: 212 VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNW 271
Query: 146 EGSWVFLG-LPNAVKSW-RVNAASVNALVVNNDLLFAGS---EGGVISVWKGTFVANPFK 200
+ S + G + K W VN V L ++D + G +I+ A F
Sbjct: 272 DCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Query: 201 QVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVT 260
+ +N + + T R W+ +C+Q L+GH+D +
Sbjct: 332 AATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF 391
Query: 261 SLLF--WDEYLFSSSLDETIKIW 281
S F + + + S D T +IW
Sbjct: 392 SCAFNYKGDIIITGSKDNTCRIW 414
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 98/247 (39%), Gaps = 55/247 (22%)
Query: 89 LMKLNGHKKAVTNVGL--PSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLI- 144
L L GH+ V + P G +K+ +GS D +W ++G+C + + AEI CL
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYG-DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF 185
Query: 145 -SEGSWVFLG-LPNAVKSWRV-----------NAASVNALVVNN--DLLFAGSEGGVISV 189
+ + V G + K W + ++A + +L N + + GS ++V
Sbjct: 186 NPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTV 245
Query: 190 WK---GTFVANPFKQVASIRAPL--WFCSL--SSSNDTR---WNSKEEAAVFEFCGH--- 236
W+ G V A I + + W CSL + S D W++ V GH
Sbjct: 246 WEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDE 305
Query: 237 --------------------TTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSL 274
T R ++ ECV L+GH ++ + F + L + S
Sbjct: 306 ILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSS 365
Query: 275 DETIKIW 281
D+T +IW
Sbjct: 366 DKTARIW 372
Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 76 SVDGDNTTNSLAT---LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVN 132
S DG S AT + KL GH+ ++ + N+L +GS D +WD +G+C+
Sbjct: 322 SADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQ 381
Query: 133 VI 134
V+
Sbjct: 382 VL 383
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 48.9 bits (115), Expect = 6e-05, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 32/179 (17%)
Query: 156 NAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVW--KGTFVANPFKQVASIRAPLWFCS 213
N + R SV A+ + +L+ + S G + +W +G F+ SI
Sbjct: 554 NVLTGHRDGVTSV-AISSHKNLIASASRDGTVHLWTPQGEFLREFTGHTGSI-------- 604
Query: 214 LSSSNDTRWNSKEEAAVFEFCGH--TTRTWNLDNLECVQTLKGHSDTVTSLLFW--DEYL 269
R + +F G T + W+LD +QTLKGH D+V S+ F E L
Sbjct: 605 ------YRVDFSPNGKIFATAGQDQTVKIWDLDG-NLLQTLKGHQDSVYSVSFSPDGEIL 657
Query: 270 FSSSLDETIKIWLYTHTKNNAELSSLFGML----DAEAKP---VLFSSGKDSAIRLYEL 321
S+S D T+++W H ++ L+ L G DA+ P L S +D IRL++L
Sbjct: 658 ASTSRDRTVRLW---HWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWDL 713
Score = 35.0 bits (79), Expect = 0.92, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
L GH+ VT+V + S N + S SRDG V +W
Sbjct: 556 LTGHRDGVTSVAISSHKNLIASASRDGTVHLW 587
Score = 32.3 bits (72), Expect = 5.7, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 88 TLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRD 126
TL L GH K+V + L S RDG++ +WD D
Sbjct: 676 TLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWDLD 714
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 12/101 (11%)
Query: 236 HTTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YLFSSSLDETIKIWLYTHTKNNAELS 293
+T + W+LD +C+ TL GH D V ++ F E ++ S+S D+TI+IW + +N E++
Sbjct: 75 YTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNW---QNRKEIA 131
Query: 294 SLFG----MLDAEAKP---VLFSSGKDSAIRLYELPSFKLR 327
L G ++ A+ P ++ S+ D IR++++ + R
Sbjct: 132 CLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKR 172
>sp|B8PD53|LIS12_POSPM Nuclear distribution protein PAC1-2 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-2 PE=3 SV=1
Length = 427
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 85/202 (42%), Gaps = 37/202 (18%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVF 151
L GH+ V+ V G + + S SRD + +W+ + C+ IT + WV
Sbjct: 192 LRGHEHTVSTVKFLPGDDLIASASRDKTIRIWEVATTFCIRTITGHED---------WVR 242
Query: 152 LGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGT--FVANPFKQVASIRAPL 209
+ +P+ + LL + S VW T + F+ I +
Sbjct: 243 MTVPS----------------TDGTLLGSCSSDNTARVWDPTSGVMKMEFRGHGHIVEVI 286
Query: 210 WFCSLSSSNDTRWNSKEEAAVFEFCGH--------TTRTWNLDNLECVQTLKGHSDTVTS 261
F L+S R + +AA + T + W++ + + ++T+ GH+D +
Sbjct: 287 AFAPLASYAAIRELAGLKAATKAPGAYIATGSRDKTVKIWDVHSGQELRTVSGHNDWIRG 346
Query: 262 LLFWD--EYLFSSSLDETIKIW 281
L+F ++L S+S D+TI++W
Sbjct: 347 LVFHPSGKHLLSASDDKTIRVW 368
>sp|P0CS49|PRP46_CRYNB Pre-mRNA-splicing factor PRP46 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PRP46 PE=3
SV=1
Length = 473
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 87 ATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLI 144
A + L GH V +V ++ SGS D V +WD +G+C+N +T+ + I
Sbjct: 299 ANIFTLTGHTSTVGDVKTQDSDPQIISGSMDSTVRLWDLAAGKCMNTLTHHKKSVRALAI 358
Query: 145 SEGSWVFLGLP---NAVKSWRV-----------NAASVNALVVNND-LLFAGSEGGVISV 189
+ F N +K W+ + A +N L +N++ +LF+G++ G +++
Sbjct: 359 HPTEYSFASASSGGNNIKKWKCPEGIFVNNFVGHEAIINTLSINSENVLFSGADNGTLTL 418
Query: 190 WKGTFVANPFKQVASIRAP-------LWFCSLSSSNDTR 221
W PF+ + I P FCS TR
Sbjct: 419 WD-YKTGLPFQHLKDIPQPGSLDAEAGVFCSTFDKTGTR 456
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 95/252 (37%), Gaps = 32/252 (12%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLISE-GS 148
++GH V V + GS +G+ D + +WD SG +T G +S+
Sbjct: 178 ISGHMGWVRAVAMDPGSQWFATGAGDRVIKIWDLASGELKLSLTGHISTIRGLAVSDRHP 237
Query: 149 WVF------------LGLPNAVKSWRVNAASVNALVVNN--DLLFAGSEGGVISVWKGTF 194
++F L ++ + + + V +L V+ D+L G + VW
Sbjct: 238 YLFSCAEDKMVKCWDLETNKVIRHYHGHFSGVYSLSVHPTLDVLVTGGRDASVRVWDMRT 297
Query: 195 VANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKG 254
AN F S+ D + + + T R W+L +C+ TL
Sbjct: 298 RANIFTLTGHT---------STVGDVKTQDSDPQIISGSMDSTVRLWDLAAGKCMNTLTH 348
Query: 255 HSDTVTSL-LFWDEYLF--SSSLDETIKIWLYTH---TKNNAELSSLFGMLDAEAKPVLF 308
H +V +L + EY F +SS IK W N ++ L ++ VLF
Sbjct: 349 HKKSVRALAIHPTEYSFASASSGGNNIKKWKCPEGIFVNNFVGHEAIINTLSINSENVLF 408
Query: 309 SSGKDSAIRLYE 320
S + + L++
Sbjct: 409 SGADNGTLTLWD 420
>sp|P0CS48|PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PRP46 PE=3 SV=1
Length = 473
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 87 ATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLI 144
A + L GH V +V ++ SGS D V +WD +G+C+N +T+ + I
Sbjct: 299 ANIFTLTGHTSTVGDVKTQDSDPQIISGSMDSTVRLWDLAAGKCMNTLTHHKKSVRALAI 358
Query: 145 SEGSWVFLGLP---NAVKSWRV-----------NAASVNALVVNND-LLFAGSEGGVISV 189
+ F N +K W+ + A +N L +N++ +LF+G++ G +++
Sbjct: 359 HPTEYSFASASSGGNNIKKWKCPEGIFVNNFVGHEAIINTLSINSENVLFSGADNGTLTL 418
Query: 190 WKGTFVANPFKQVASIRAP-------LWFCSLSSSNDTR 221
W PF+ + I P FCS TR
Sbjct: 419 WD-YKTGLPFQHLKDIPQPGSLDAEAGVFCSTFDKTGTR 456
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 95/252 (37%), Gaps = 32/252 (12%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI--GCLISE-GS 148
++GH V V + G+ +G+ D + +WD SG +T G +S+
Sbjct: 178 ISGHMGWVRAVAMDPGNQWFATGAGDRVIKIWDLASGELKLSLTGHISTIRGLAVSDRHP 237
Query: 149 WVF------------LGLPNAVKSWRVNAASVNALVVNN--DLLFAGSEGGVISVWKGTF 194
++F L ++ + + + V +L V+ D+L G + VW
Sbjct: 238 YLFSCAEDKMVKCWDLETNKVIRHYHGHFSGVYSLSVHPTLDVLVTGGRDASVRVWDMRT 297
Query: 195 VANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKG 254
AN F S+ D + + + T R W+L +C+ TL
Sbjct: 298 RANIFTLTGHT---------STVGDVKTQDSDPQIISGSMDSTVRLWDLAAGKCMNTLTH 348
Query: 255 HSDTVTSL-LFWDEYLF--SSSLDETIKIWLYTH---TKNNAELSSLFGMLDAEAKPVLF 308
H +V +L + EY F +SS IK W N ++ L ++ VLF
Sbjct: 349 HKKSVRALAIHPTEYSFASASSGGNNIKKWKCPEGIFVNNFVGHEAIINTLSINSENVLF 408
Query: 309 SSGKDSAIRLYE 320
S + + L++
Sbjct: 409 SGADNGTLTLWD 420
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 103/245 (42%), Gaps = 41/245 (16%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLY-SGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEG 147
L ++ H +V++V L S +L +G D RV++W + C+ +T
Sbjct: 13 LQEIVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLT------------ 60
Query: 148 SWVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRA 207
G V+S R N A +L+ AGS+ G + VW A + + +A
Sbjct: 61 -----GHTTPVESVRFNNA--------EELIVAGSQSGSLRVWD-LEAAKILRTLMGHKA 106
Query: 208 PLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDE 267
CSL ++ + + W++ CV KGH+ V L F +
Sbjct: 107 --NVCSLD------FHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPD 158
Query: 268 --YLFSSSLDETIKIWLYTHTKNNAELSSLFGMLD-AEAKP---VLFSSGKDSAIRLYEL 321
+L S+S D ++K+W T K AELS G ++ E P +L S D +R ++L
Sbjct: 159 GKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDL 218
Query: 322 PSFKL 326
F+L
Sbjct: 219 EKFQL 223
Score = 38.9 bits (89), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 103/273 (37%), Gaps = 72/273 (26%)
Query: 64 GDKCRFLHSWVHSVDGDNTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVW 123
GD CR ++ W + N +M L GH V +V + + +GS+ G + VW
Sbjct: 40 GDDCR-VNLW--------SVNKPNCIMSLTGHTTPVESVRFNNAEELIVAGSQSGSLRVW 90
Query: 124 DRDSGRCVNVITNGAEIGCLI---SEGSWVFLG-LPNAVKSWRVNAASVNALVVNNDLLF 179
D ++ + + + C + G +V G L +K W V
Sbjct: 91 DLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVR--------------- 135
Query: 180 AGSEGGVISVWKGTFVANPFKQVASIRAPLWFCSLSSSNDTRWNSKEEAAVFEFCGHTTR 239
G + +KG ++R L S D +W + H+ +
Sbjct: 136 ---RKGCVFRYKG--------HTQAVRC------LRFSPDGKWLASASD------DHSVK 172
Query: 240 TWNLDNLECVQTLKGHSDTVTSLLFW-DEYLFSS-SLDETIKIWLYTHTKNNAELSSLFG 297
W+L + + L H V + F +EYL +S S D T++ W + E L G
Sbjct: 173 LWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFW-------DLEKFQLIG 225
Query: 298 MLDAEAKPV---LFSS--------GKDSAIRLY 319
+ E PV LFSS G+D A+R+Y
Sbjct: 226 CTEGETIPVRAILFSSDGGCIFCGGRD-ALRVY 257
>sp|Q0CJD8|MDV1_ASPTN Mitochondrial division protein 1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=mdv1 PE=3 SV=2
Length = 654
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 95/260 (36%), Gaps = 70/260 (26%)
Query: 87 ATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLIS 145
+ + ++ H VT + + S + D V VWD + GRC ++ + A + CL
Sbjct: 311 SQIKEMPAHNDMVTAIDFDFPFGTMVSAALDDTVRVWDLNVGRCTGLLEGHNASVRCLQI 370
Query: 146 EGSWVFLGLPNA-VKSW------------RVN---------------------------- 164
E + V G +A VK W RVN
Sbjct: 371 EDNIVATGSMDASVKLWDLSRARSVTRDGRVNKDDEGEDTADDAHELFQSTTLEDCYVYS 430
Query: 165 ----AASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRAPLWFCSLSSS--N 218
V AL D L +GS + W V Q + LW + +S+
Sbjct: 431 LDAHVDEVTALHFRGDTLISGSADKTLRQWD--LVKGRCVQTLDV---LWAAAQASTLGG 485
Query: 219 DTRWNS--KEEAAVFEFCGH---------------TTRTWNLDNLECVQTLKGHSDTVTS 261
DT+W + A +F G R W+L + + ++L GH+ VT
Sbjct: 486 DTQWRPSGRLPDASADFVGALQCFDAALACGTADGMVRLWDLRSGQVHRSLVGHTGPVTC 545
Query: 262 LLFWDEYLFSSSLDETIKIW 281
L F D +L + SLD +I+IW
Sbjct: 546 LQFDDVHLVTGSLDRSIRIW 565
>sp|Q7Z4S6|KI21A_HUMAN Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2
Length = 1674
Score = 48.5 bits (114), Expect = 9e-05, Method: Composition-based stats.
Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 36/196 (18%)
Query: 91 KLNGHKKAV---TNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEG 147
KL GH V T + SG + + +GS+D + ++D +T GA
Sbjct: 1487 KLTGHLGPVMCLTVDQISSGQDLIITGSKDHYIKMFD---------VTEGA--------- 1528
Query: 148 SWVFLGLPNAVKSWRV-NAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIR 206
LG + ++ + + AL + D LF+GS I W T + +QV +
Sbjct: 1529 ----LGTVSPTHNFEPPHYDGIEALTIQGDNLFSGSRDNGIKKWDLT-QKDLLQQVPNAH 1583
Query: 207 APLWFCSLSSSNDTRWNSKEEAAVFEFC-GHTTRTWNLDNLECVQTLKGHSDTVTSLLFW 265
W C+L D + C G + WN+D V +KGH + ++
Sbjct: 1584 KD-WVCALGVVPD-------HPVLLSGCRGGILKVWNMDTFMPVGEMKGHDSPINAICVN 1635
Query: 266 DEYLFSSSLDETIKIW 281
++F+++ D T++IW
Sbjct: 1636 STHIFTAADDRTVRIW 1651
Score = 35.0 bits (79), Expect = 0.86, Method: Composition-based stats.
Identities = 52/252 (20%), Positives = 99/252 (39%), Gaps = 31/252 (12%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD-RDSGRCVNVITNGAEI--GCLIS 145
+M L GH V +V + ++ +++ S + VWD RDS +C+ +T+ ++ G S
Sbjct: 1380 IMSLGGHPNNVVSVKYCNYTSLVFTVS-TSYIKVWDIRDSAKCIRTLTSSGQVTLGDACS 1438
Query: 146 EGSWVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASI 205
+ + +P+ ++N ++N L+A S G + +W + K +
Sbjct: 1439 ASTSRTVAIPSGEN--QINQIALNP---TGTFLYAAS-GNAVRMWDLKRFQSTGKLTGHL 1492
Query: 206 RAPLWFC--SLSSSNDTRWNSKEEAAVFEF------CGHTTRTWNLDNLECVQTLKGHSD 257
+ +SS D ++ + F G + T N + H D
Sbjct: 1493 GPVMCLTVDQISSGQDLIITGSKDHYIKMFDVTEGALGTVSPTHNFE--------PPHYD 1544
Query: 258 TVTSLLFWDEYLFSSSLDETIKIWLYTHTK-----NNAELSSLFGMLDAEAKPVLFSSGK 312
+ +L + LFS S D IK W T NA + + PVL S +
Sbjct: 1545 GIEALTIQGDNLFSGSRDNGIKKWDLTQKDLLQQVPNAHKDWVCALGVVPDHPVLLSGCR 1604
Query: 313 DSAIRLYELPSF 324
++++ + +F
Sbjct: 1605 GGILKVWNMDTF 1616
Score = 33.1 bits (74), Expect = 3.3, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 246 LECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIW 281
L+C+ +GH+ V + D+ LF+ S D T K+W
Sbjct: 1337 LQCIHIAEGHTKAVLCVDSTDDLLFTGSKDRTCKVW 1372
>sp|B2VWG7|LIS1_PYRTR Nuclear distribution protein PAC1 OS=Pyrenophora tritici-repentis
(strain Pt-1C-BFP) GN=pac1 PE=3 SV=1
Length = 461
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 34/220 (15%)
Query: 81 NTTNSLATLMKLNGHKKAVTNV--------GLPSGSNKLYSGSRDGRVSVWDRDSGRCVN 132
+ ++ + L GH +V+ + G PS N L S SRD + +WD +G CV
Sbjct: 187 DPSDEYKNIRTLPGHDHSVSAIRFVPSGAAGSPSSGNLLVSASRDKTLRIWDVTTGYCVK 246
Query: 133 VITNGAEIGCLISEGSWVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKG 192
I A+ WV P+ W ++A + L+ S G K
Sbjct: 247 TIRGHAD---------WVRDVAPSFDGRWLLSAGNDQTA-----RLWDASSGEP----KC 288
Query: 193 TFVANP-FKQVASIRAPLWFCSLSS----SNDTRWNSKEEAAVFEFCGHTTRTWNLDNLE 247
TF+ + + +I P+ + +L+S +S E T + W+
Sbjct: 289 TFIGHEHVVECVTIAPPVSYANLASLAGLKKPPPLSSSAEYIATGSRDKTIKIWD-GRGT 347
Query: 248 CVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIWLYTH 285
++TL GH + + SL+F +YL S+S D+TI+ W T
Sbjct: 348 LIKTLTGHDNWIRSLVFHPGGKYLLSASDDKTIRCWDLTQ 387
Score = 35.0 bits (79), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 88 TLMK-LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD-RDSGRCVNVITNGAEIGCLIS 145
TL+K L GH + ++ G L S S D + WD GRCV +T+ G +S
Sbjct: 347 TLIKTLTGHDNWIRSLVFHPGGKYLLSASDDKTIRCWDLTQEGRCVKTVTDAH--GHFVS 404
Query: 146 EGSWVFLGLPNAVKSWRVNAASVN 169
W PN +K VN + N
Sbjct: 405 CMRWA----PNVIKDVPVNGDATN 424
>sp|B6QC56|LIS11_PENMQ Nuclear distribution protein nudF 1 OS=Penicillium marneffei
(strain ATCC 18224 / CBS 334.59 / QM 7333) GN=nudF-1
PE=3 SV=1
Length = 459
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 44/219 (20%)
Query: 81 NTTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEI 140
N + L GH+ +V+ V G N L S SRD + +WD +G CV I
Sbjct: 188 NPLEDYKNIRTLLGHEHSVSAVRFIPGRNLLTSASRDKDLRIWDVTTGFCVKTIQG---- 243
Query: 141 GCLISEGSWVFLGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFK 200
WV P+ + + LF+ + +W T ++NP
Sbjct: 244 -----HSGWVRDVCPS----------------FDGNYLFSAGDDVTARLWDITNISNPEA 282
Query: 201 QVASI--RAPLWFCSLSSSNDTRWNS-----KEEA----AVFEFCG-----HTTRTWNLD 244
++ + + C+++ ++ + K+EA + EF T + W+
Sbjct: 283 KLTMVGHDHVIECCAVAPQTSYQYLAPMAGLKKEALSKMSAVEFTATGSRDKTIKVWDRR 342
Query: 245 NLECVQTLKGHSDTVTSLLFWD--EYLFSSSLDETIKIW 281
C+ TL GH + V +++F +YL S+S D++I+ W
Sbjct: 343 G-SCLMTLVGHDNWVRAIVFHPGGKYLLSASDDKSIRCW 380
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 11/93 (11%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWD-RDSGRCVNVITN--GAEIGCLIS 145
LM L GH V + G L S S D + WD G+CV +++ G + CL
Sbjct: 346 LMTLVGHDNWVRAIVFHPGGKYLLSASDDKSIRCWDLSQDGKCVKTLSDAHGRFVTCL-- 403
Query: 146 EGSWVFLGLPNAVKSWRVNAASVNALVVNNDLL 178
W P+ VK +A S N NDLL
Sbjct: 404 --RWA----PSVVKEVAPSAESANGQTDTNDLL 430
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 239 RTWNLDNLECVQTLKGHSDTVTSLL--FWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
R W++ CV+T++GHS V + F YLFS+ D T ++W T+ N ++
Sbjct: 228 RIWDVTTGFCVKTIQGHSGWVRDVCPSFDGNYLFSAGDDVTARLWDITNISNPEAKLTMV 287
Query: 297 G 297
G
Sbjct: 288 G 288
>sp|Q7S8R5|MDV1_NEUCR Mitochondrial division protein 1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=mdv-1 PE=3 SV=1
Length = 645
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 22/144 (15%)
Query: 237 TTRTWNLDNLECVQTLKGHSDTVTSLLFWDEYLFSSSLDETIKIWLYTHTKNNAELSSLF 296
+ R W+L+ C+ TL+GH+ +V +L D +L + S+D TIK+W + + + S
Sbjct: 330 SVRVWDLNAGRCIGTLEGHTASVRTLQIEDNFLATGSMDATIKLWDLSKAHYDPQGSQ-- 387
Query: 297 GMLDAEAKPVLFSSGKDSAI-----RLYELPSFKLRARIFSRREVEVDQIGPAGLFFPGD 351
+D E + + F + D A+ + + P F L E +D+I L F GD
Sbjct: 388 -EVDEEDEDLAFVNPNDHAVDPPAGSMADCPLFTL--------EAHLDEI--TALHFRGD 436
Query: 352 --ASGSVG--VWKWLLAEQQKMET 371
SGS + +W L + + ++T
Sbjct: 437 VLVSGSADKTLRQWDLTKGRCVQT 460
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 100/265 (37%), Gaps = 80/265 (30%)
Query: 89 LMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLISEG 147
+ + H+ +T + + + S + D V VWD ++GRC+ + + A + L E
Sbjct: 300 IRSMRAHQDNITALDFDAPFGLMVSAAMDDSVRVWDLNAGRCIGTLEGHTASVRTLQIED 359
Query: 148 SWVFLGLPNA-VKSWRVNAA---------------------------------------- 166
+++ G +A +K W ++ A
Sbjct: 360 NFLATGSMDATIKLWDLSKAHYDPQGSQEVDEEDEDLAFVNPNDHAVDPPAGSMADCPLF 419
Query: 167 -------SVNALVVNNDLLFAGSEGGVISVW---KGTFVANPFKQVASIRAPLWFCSLSS 216
+ AL D+L +GS + W KG V Q + +W + ++
Sbjct: 420 TLEAHLDEITALHFRGDVLVSGSADKTLRQWDLTKGRCV-----QTLDV---MWAAAQAT 471
Query: 217 ---SNDTRWNSKEEAA-----------VFE---FCGHT---TRTWNLDNLECVQTLKGHS 256
S+D W +A VFE CG R W+L + + ++L GH+
Sbjct: 472 AMGSSDGPWRQTSRSADGSADFVGALQVFESALACGTADGMVRLWDLRSGQVHRSLVGHT 531
Query: 257 DTVTSLLFWDEYLFSSSLDETIKIW 281
VT L F D +L + SLD +I+IW
Sbjct: 532 GPVTCLQFDDVHLVTGSLDRSIRIW 556
>sp|Q96DI7|SNR40_HUMAN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens
GN=SNRNP40 PE=1 SV=1
Length = 357
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 36/192 (18%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVF 151
L GH AV + + + L+S S D V+VWD ++G V + +G F
Sbjct: 105 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRL-----------KGHTSF 153
Query: 152 LGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRAPLWF 211
+ N+ R L+ GS+ G + +W ++ A+I+ F
Sbjct: 154 V---NSCYPARRGP----------QLVCTGSDDGTVKLWD-------IRKKAAIQT---F 190
Query: 212 CSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YL 269
+ +N + + + + W+L + T++GH+D+VT L E YL
Sbjct: 191 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL 250
Query: 270 FSSSLDETIKIW 281
S+++D T+++W
Sbjct: 251 LSNAMDNTVRVW 262
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 36/192 (18%)
Query: 92 LNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAEIGCLISEGSWVF 151
L GH AV + + + L+S S D V+VWD ++G V + +G F
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRL-----------KGHTSF 154
Query: 152 LGLPNAVKSWRVNAASVNALVVNNDLLFAGSEGGVISVWKGTFVANPFKQVASIRAPLWF 211
+ N+ R L+ GS+ G + +W ++ A+I+ F
Sbjct: 155 V---NSCYPARRGP----------QLVCTGSDDGTVKLWD-------IRKKAAIQT---F 191
Query: 212 CSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKGHSDTVTSLLFWDE--YL 269
+ +N + + + + W+L + T++GH+D+VT L E YL
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL 251
Query: 270 FSSSLDETIKIW 281
S+++D T+++W
Sbjct: 252 LSNAMDNTVRVW 263
>sp|Q5FWQ6|WDR69_XENLA Outer row dynein assembly protein 16 homolog OS=Xenopus laevis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 90 MKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVN-VITNGAEIGC------ 142
+ L+GH + ++ + ++L +GS D VSVW+ SGR ++ +I + EI
Sbjct: 213 LTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWD 272
Query: 143 --LISEGSWVFLGLPNAVKSW-RVNAASVNALVVNNDLLFA---GSEGGVISVWKGTFVA 196
LI+ S + + K W +N V L ++D + S G +++ A
Sbjct: 273 CSLIATAS-----MDKSCKLWDSLNGKCVATLTGHDDEVLDVTFDSTGQLVATASADGTA 327
Query: 197 NPFKQVASIRAPLWFCSLSSSNDTR--WNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKG 254
+ AS R L ++ +N++ V T+R W+ EC+Q LKG
Sbjct: 328 RVYS--ASSRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKTSRLWDPHTGECLQVLKG 385
Query: 255 HSDTVTSLLFWDE--YLFSSSLDETIKIW 281
H+D + S F E + + S D T +IW
Sbjct: 386 HTDEIFSCAFNYEGNTIITGSKDNTCRIW 414
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 41/230 (17%)
Query: 89 LMKLNGHKKAVTNVGL--PSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLI- 144
L L GH+ V + P G +K+ +GS D +W ++G+C + + AEI CL+
Sbjct: 127 LHTLEGHRNVVYAIQFNNPYG-DKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLVF 185
Query: 145 -SEGSWVFLG-LPNAVKSWRV-----------NAASVNALVVNN--DLLFAGSEGGVISV 189
+ + + G + K W + +AA + +L N D L GS +SV
Sbjct: 186 NPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSV 245
Query: 190 WK---GTFVANPFKQVASIRAPL--WFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLD 244
W+ G + I + W CSL ++ A++ + C + W+
Sbjct: 246 WEIPSGRRIHTLIGHRGEISSAQFNWDCSLIAT----------ASMDKSC----KLWDSL 291
Query: 245 NLECVQTLKGHSDTVTSLLF--WDEYLFSSSLDETIKIWLYTHTKNNAEL 292
N +CV TL GH D V + F + + ++S D T +++ + K A+L
Sbjct: 292 NGKCVATLTGHDDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKL 341
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 82 TTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE-- 139
+ +S L KL GH+ ++ + + N++ + S D +WD +G C+ V+ +
Sbjct: 331 SASSRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKTSRLWDPHTGECLQVLKGHTDEI 390
Query: 140 IGCLIS-EGSWVFLGLP-NAVKSWR 162
C + EG+ + G N + WR
Sbjct: 391 FSCAFNYEGNTIITGSKDNTCRIWR 415
>sp|Q6P2Y2|WDR69_XENTR Outer row dynein assembly protein 16 homolog OS=Xenopus tropicalis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 90 MKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVN-VITNGAEIGC------ 142
+ L+GH + ++ + ++L +GS D VSVW+ SGR ++ +I + EI
Sbjct: 213 LTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWD 272
Query: 143 --LISEGSWVFLGLPNAVKSW-RVNAASVNALVVNNDLLFA---GSEGGVISVWKGTFVA 196
LI+ S + + K W +N V L + D + S G +++ A
Sbjct: 273 CSLIATAS-----MDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQLVATASADGTA 327
Query: 197 NPFKQVASIRAPLWFCSLSSSNDTR--WNSKEEAAVFEFCGHTTRTWNLDNLECVQTLKG 254
+ AS R L ++ +N++ + T+R WN EC+Q LKG
Sbjct: 328 RVYS--ASSRKCLAKLEGHEGEISKICFNAQGNRILTASSDKTSRLWNPHTGECLQVLKG 385
Query: 255 HSDTVTSLLFWDE--YLFSSSLDETIKIW 281
H+D + S F E + + S D T +IW
Sbjct: 386 HTDEIFSCAFNYEGNTIITGSKDNTCRIW 414
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 41/230 (17%)
Query: 89 LMKLNGHKKAVTNVGL--PSGSNKLYSGSRDGRVSVWDRDSGRCVNVIT-NGAEIGCLI- 144
L L GH+ V + P G +K+ +GS D +W ++G+C + + AEI CL
Sbjct: 127 LHTLEGHRNVVYAIQFNNPYG-DKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLAF 185
Query: 145 -SEGSWVFLG-LPNAVKSWRV-----------NAASVNALVVNN--DLLFAGSEGGVISV 189
+ + + G + K W + +AA + +L N D L GS +SV
Sbjct: 186 NPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSV 245
Query: 190 WK---GTFVANPFKQVASIRAPL--WFCSLSSSNDTRWNSKEEAAVFEFCGHTTRTWNLD 244
W+ G + I + W CSL ++ A++ + C + W+
Sbjct: 246 WEIPSGRRIHTLIGHRGEISSAQFNWDCSLIAT----------ASMDKSC----KLWDSL 291
Query: 245 NLECVQTLKGHSDTVTSLLF--WDEYLFSSSLDETIKIWLYTHTKNNAEL 292
N +CV TL GH D V + F + + ++S D T +++ + K A+L
Sbjct: 292 NGKCVATLTGHEDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKL 341
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 82 TTNSLATLMKLNGHKKAVTNVGLPSGSNKLYSGSRDGRVSVWDRDSGRCVNVITNGAE-- 139
+ +S L KL GH+ ++ + + N++ + S D +W+ +G C+ V+ +
Sbjct: 331 SASSRKCLAKLEGHEGEISKICFNAQGNRILTASSDKTSRLWNPHTGECLQVLKGHTDEI 390
Query: 140 IGCLIS-EGSWVFLGLP-NAVKSWR 162
C + EG+ + G N + WR
Sbjct: 391 FSCAFNYEGNTIITGSKDNTCRIWR 415
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,423,963
Number of Sequences: 539616
Number of extensions: 6084654
Number of successful extensions: 23159
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 458
Number of HSP's that attempted gapping in prelim test: 18135
Number of HSP's gapped (non-prelim): 4100
length of query: 371
length of database: 191,569,459
effective HSP length: 119
effective length of query: 252
effective length of database: 127,355,155
effective search space: 32093499060
effective search space used: 32093499060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)