Query         041208
Match_columns 89
No_of_seqs    133 out of 1087
Neff          5.1 
Searched_HMMs 29240
Date          Mon Mar 25 07:44:30 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041208.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041208hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3vta_A Cucumisin; subtilisin-l  99.9 7.2E-27 2.5E-31  189.5  -0.5   76    5-88      1-134 (621)
  2 3i6s_A Subtilisin-like proteas  99.9 5.1E-24 1.7E-28  174.8  -0.2   78    5-88      1-143 (649)
  3 4h6w_A N-terminal cyanobactin   99.4 1.5E-14 5.1E-19  106.5  -1.0   54   24-88     12-94  (306)
  4 1xf1_A C5A peptidase, SCP; hyd  99.4   6E-14   2E-18  118.5   2.1   61   24-89      8-125 (926)
  5 3afg_A Subtilisin-like serine   99.4 1.1E-13 3.7E-18  111.2   2.4   58   23-88    129-213 (539)
  6 3t41_A Epidermin leader peptid  99.3 2.5E-13 8.5E-18  105.5   1.5   52   24-88    137-229 (471)
  7 3hjr_A Extracellular serine pr  99.3 3.3E-13 1.1E-17  107.6   1.2   56   23-88     60-146 (600)
  8 2oxa_A Extracellular serine pr  99.3   6E-13 2.1E-17  107.0   2.2   56   23-88     60-146 (600)
  9 2ixt_A 36KDA protease; serine   99.2 2.7E-12 9.3E-17   94.9   2.8   58   23-88     16-104 (310)
 10 4h6x_A Thiazoline oxidase/subt  99.2 6.6E-13 2.2E-17  100.9  -1.7   32   46-88    108-139 (357)
 11 1r0r_E Subtilisin carlsberg; h  99.2 2.7E-12 9.3E-17   94.3   1.5   56   23-88     14-94  (274)
 12 2z30_A TK-subtilisin; thermoco  99.2 5.2E-12 1.8E-16   94.5   2.6   55   23-88     18-106 (320)
 13 1dbi_A AK.1 serine protease; h  99.2 4.1E-12 1.4E-16   93.8   2.0   57   23-88     21-104 (280)
 14 1gci_A Subtilisin; hydrolase,   99.2 3.9E-12 1.3E-16   93.6   1.7   56   23-88     14-93  (269)
 15 1to2_E Subtilisin BPN'; serine  99.2 3.5E-12 1.2E-16   94.2   1.5   56   23-88     14-95  (281)
 16 4dzt_A Aqualysin-1, aqualysin-  99.2   5E-12 1.7E-16   92.5   2.1   51   23-88     21-96  (276)
 17 2x8j_A Intracellular subtilisi  99.2 2.8E-12 9.6E-17   96.6   0.8   56   23-88     31-117 (327)
 18 1sh7_A Extracellular subtilisi  99.2 6.3E-12 2.2E-16   93.2   2.2   51   23-88     19-96  (284)
 19 2b6n_A Proteinase K; S binding  99.2 6.2E-12 2.1E-16   92.6   2.1   51   23-88     21-98  (278)
 20 3f7m_A Alkaline serine proteas  99.2 3.5E-12 1.2E-16   93.4   0.3   48   25-88     25-96  (279)
 21 2z2z_A TK-subtilisin precursor  99.2 9.4E-12 3.2E-16   95.5   2.6   55   23-88     93-181 (395)
 22 3zxy_A Subtilisin-like protein  99.1 2.4E-12 8.3E-17   94.3  -0.9   47   31-88      5-81  (282)
 23 1thm_A Thermitase; hydrolase(s  99.1 8.1E-12 2.8E-16   92.0   1.6   56   23-88     21-103 (279)
 24 2id4_A Kexin; KEX2, kexin, fur  99.1 1.5E-11   5E-16   97.4   1.6   57   23-88     44-132 (503)
 25 1p8j_A Furin precursor; prohor  99.1 1.5E-11 5.1E-16   96.4   1.5   57   23-88     28-119 (471)
 26 2pwa_A Proteinase K; structure  99.1 2.9E-11 9.8E-16   89.5   1.6   44   30-88     28-95  (279)
 27 2iy9_A SUBA; toxin, shiga, pla  99.0   8E-12 2.8E-16   93.8  -2.2   52   23-88     33-117 (347)
 28 1y9z_A Alkaline serine proteas  99.0 7.8E-11 2.7E-15   91.5   2.6   54   23-88     14-98  (441)
 29 1wmd_A Protease; alpha-beta hy  99.0   5E-11 1.7E-15   92.2   1.2   53   24-88     12-97  (434)
 30 2p4e_P Proprotein convertase s  99.0 3.3E-11 1.1E-15  100.4   0.1   50   24-88    169-252 (692)
 31 3lpc_A APRB2; protease, subtil  99.0 6.6E-11 2.3E-15   88.3   1.2   57   23-88     22-136 (340)
 32 1r6v_A Subtilisin-like serine   99.0 7.3E-11 2.5E-15   97.7   1.3   52   26-88    148-231 (671)
 33 2qtw_B Proprotein convertase s  98.9 1.6E-10 5.4E-15   94.2   0.8   50   24-88     17-100 (546)
 34 3lxu_X Tripeptidyl-peptidase 2  98.5 2.5E-08 8.5E-13   88.1   0.6   36   43-88    268-303 (1354)
 35 1t1e_A Kumamolisin; proenzyme,  72.8     1.1 3.7E-05   36.0   1.0   16   73-88    273-288 (552)
 36 3lxu_X Tripeptidyl-peptidase 2  34.5      30   0.001   31.2   3.5   12   31-42     34-45  (1354)

No 1  
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=99.92  E-value=7.2e-27  Score=189.54  Aligned_cols=76  Identities=36%  Similarity=0.651  Sum_probs=71.2

Q ss_pred             CCCCCCccccccCCCCCCCCCcccccCCCCeEEEEecC------------------------------------------
Q 041208            5 TTRSWDFLGMEKDNIMPPNSLWNKARFGEDVIIGNIDT------------------------------------------   42 (89)
Q Consensus         5 TTrSw~flgl~~~~~~~~~~~w~~~~~G~gviIgVlDT------------------------------------------   42 (89)
                      ||||||||||+.       .+|.++..|+|||||||||                                          
T Consensus         1 tt~s~~flGl~~-------~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~   73 (621)
T 3vta_A            1 TTRSWDFLGFPL-------TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARS   73 (621)
T ss_dssp             CCSHHHHTTCCT-------TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEE
T ss_pred             CCCChhHcCCCc-------cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeee
Confidence            899999999983       5788888999999999999                                          


Q ss_pred             ----------------CCCCCCcceeccccCccccccceecccCCceeeecCCCCcEEEEEc
Q 041208           43 ----------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        43 ----------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~G~AP~aria~yKv   88 (89)
                                      |++|||||||||+||+.+.+++++| ++.|+++|+||+|+|++|||
T Consensus        74 ~~~~~~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g-~~~g~~~GvAP~A~l~~~kv  134 (621)
T 3vta_A           74 YHIGRPISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYG-LGLGTARGGVPLARIAAYKV  134 (621)
T ss_dssp             CCCSSSCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETT-EEEEEECCSCTTSEEEEEEC
T ss_pred             cccCCccCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccc-cccccEEEECCCCEEEEEEe
Confidence                            5679999999999999999999999 89999999999999999997


No 2  
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=99.87  E-value=5.1e-24  Score=174.81  Aligned_cols=78  Identities=35%  Similarity=0.647  Sum_probs=72.5

Q ss_pred             CCCCCCccccccCCCCCCCCCcccccCCCCeEEEEecC----------C-------------------------------
Q 041208            5 TTRSWDFLGMEKDNIMPPNSLWNKARFGEDVIIGNIDT----------D-------------------------------   43 (89)
Q Consensus         5 TTrSw~flgl~~~~~~~~~~~w~~~~~G~gviIgVlDT----------D-------------------------------   43 (89)
                      ||||||||||+..     .++|..+..|+||+||||||          |                               
T Consensus         1 Tt~s~~flgl~~~-----~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig   75 (649)
T 3i6s_A            1 TTHTSDFLKLNPS-----SGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIG   75 (649)
T ss_dssp             CCSHHHHTTCCSS-----SSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEE
T ss_pred             CCCChHHcCCCCc-----hhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceee
Confidence            8999999999842     58999999999999999999          3                               


Q ss_pred             ------------------------CCCCCcceeccccCccccccceecccCCceeeecCCCCcEEEEEc
Q 041208           44 ------------------------FHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        44 ------------------------~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~G~AP~aria~yKv   88 (89)
                                              .+|||||||+|++|+.+.+++++| ++.|+++|+||+|+|++|||
T Consensus        76 ~~~f~~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G-~~~g~~~GvAP~A~l~~~kv  143 (649)
T 3i6s_A           76 ANYFNKGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFG-YAPGTARGVAPRARLAVYKF  143 (649)
T ss_dssp             EEECCHHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETT-EEEEEECCSSTTCEEEEEEC
T ss_pred             eEeccCcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccc-cccCceeEECCCCEEEEEec
Confidence                                    349999999999999999999999 99999999999999999997


No 3  
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=99.40  E-value=1.5e-14  Score=106.54  Aligned_cols=54  Identities=19%  Similarity=0.265  Sum_probs=45.5

Q ss_pred             CCcccccCCCCeEEEEecC-----------------------------CCCCCCcceeccccCccccccceecccCCcee
Q 041208           24 SLWNKARFGEDVIIGNIDT-----------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQR   74 (89)
Q Consensus        24 ~~w~~~~~G~gviIgVlDT-----------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a   74 (89)
                      .+|..++-++||+|+||||                             |.+|||||||++++|+.-          . ..
T Consensus        12 ~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~----------~-~~   80 (306)
T 4h6w_A           12 KLWSETRGDPKICVAVLDGIVDQNHPCFIGADLTRLPSLVSGEANANGSMSTHGTHVASIIFGQHD----------S-PV   80 (306)
T ss_dssp             HHHHHCSCCTTCEEEEESSCCCTTSGGGTTCEEEECC----------CCCCHHHHHHHHHHHCCTT----------S-SS
T ss_pred             HHHhhhCCCCCCEEEEEcCCCCCCChhHcCCcccCCCcccCCCCCCCCCCCCchHHHHHHHHcccc----------C-Cc
Confidence            5899887568999999999                             667899999999998731          1 24


Q ss_pred             eecCCCCcEEEEEc
Q 041208           75 KEGPLKPEWHLIEY   88 (89)
Q Consensus        75 ~G~AP~aria~yKv   88 (89)
                      .|+||+|+|.++|+
T Consensus        81 ~GVAp~a~l~~~kv   94 (306)
T 4h6w_A           81 TGIAPQCRGLIVPV   94 (306)
T ss_dssp             CCSSTTSEEEECCC
T ss_pred             ceeccccccceeec
Confidence            78999999999997


No 4  
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=99.39  E-value=6e-14  Score=118.45  Aligned_cols=61  Identities=20%  Similarity=0.227  Sum_probs=51.2

Q ss_pred             CCcccccCCCCeEEEEecC---------------------------------------------------------CCCC
Q 041208           24 SLWNKARFGEDVIIGNIDT---------------------------------------------------------DFHG   46 (89)
Q Consensus        24 ~~w~~~~~G~gviIgVlDT---------------------------------------------------------D~~G   46 (89)
                      .+|.....|+||+||||||                                                         |++|
T Consensus         8 ~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~~~~D~~g   87 (926)
T 1xf1_A            8 TLQEKAGKGAGTVVAVIDAGFDKNHEAWRLTDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDGKTAVDQE   87 (926)
T ss_dssp             HHHHHHCSCTTCEEEEEESCCTTCCCCCSCCSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCSCCCCSST
T ss_pred             HHHhccCCCCCcEEEEEecCCCCCCHhHcCCCCCcccccchhhhcccccccCcccccccCcccceeeccccCCCCCCCCC
Confidence            5898888999999999999                                                         1257


Q ss_pred             CCcceeccccCccccccceecccCCceeeecCCCCcEEEEEcC
Q 041208           47 HGTHTLSTVGGSFVKNVSAFGNVGDGQRKEGPLKPEWHLIEYA   89 (89)
Q Consensus        47 HGTH~a~taaG~~v~~a~~~G~~~~G~a~G~AP~aria~yKv~   89 (89)
                      ||||||+|+||+.+.+++.     .+.++|+||+|+|++|||.
T Consensus        88 HGThVAgiiAg~~~~~~~~-----~~~~~GvAP~A~l~~~kv~  125 (926)
T 1xf1_A           88 HGTHVSGILSGNAPSETKE-----PYRLEGAMPEAQLLLMRVE  125 (926)
T ss_dssp             TTTHHHHSSCCCCCCCCSC-----SCCTTTTCTTSEEEEEECC
T ss_pred             cHHHHHHHHhCCCccCccc-----CCceEEECCCCEEEEEEee
Confidence            9999999999998776542     1356899999999999983


No 5  
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=99.37  E-value=1.1e-13  Score=111.17  Aligned_cols=58  Identities=33%  Similarity=0.456  Sum_probs=49.5

Q ss_pred             CCCcccccCCCCeEEEEecC---------------------------CCCCCCcceeccccCccccccceecccCCceee
Q 041208           23 NSLWNKARFGEDVIIGNIDT---------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRK   75 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT---------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~   75 (89)
                      +.+|.....|+||+|+||||                           |++|||||||+|++|+..        ...|.+.
T Consensus       129 ~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~~i~~~~d~~~~~~~~~D~~gHGThVAgiiag~~~--------~~~g~~~  200 (539)
T 3afg_A          129 TNMWNLGYDGSGITIGIIDTGIDASHPDLQGKVIGWVDFVNGKTTPYDDNGHGTHVASIAAGTGA--------ASNGKYK  200 (539)
T ss_dssp             SCCBCCSCCCTTCEEEEEESBCCTTSGGGTTTEEEEEETTTCCSSCCBSSSHHHHHHHHHHCCCG--------GGTTTTC
T ss_pred             HhHHhcCCCCCCcEEEEEecCCCCCChHHhCCEeeeEECCCCCCCCCCCCCCHHHHHHHHhCcCc--------cCCCCEE
Confidence            46898888899999999999                           678999999999999742        1234568


Q ss_pred             ecCCCCcEEEEEc
Q 041208           76 EGPLKPEWHLIEY   88 (89)
Q Consensus        76 G~AP~aria~yKv   88 (89)
                      |+||+|+|++|||
T Consensus       201 GvAp~A~l~~~kv  213 (539)
T 3afg_A          201 GMAPGAKLVGIKV  213 (539)
T ss_dssp             CSCTTCEEEEEEC
T ss_pred             EECCCCEEEEEEe
Confidence            9999999999997


No 6  
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=99.32  E-value=2.5e-13  Score=105.53  Aligned_cols=52  Identities=19%  Similarity=0.246  Sum_probs=45.4

Q ss_pred             CCcccccCCCCeEEEEecC-----------------------------------------CCCCCCcceeccccCccccc
Q 041208           24 SLWNKARFGEDVIIGNIDT-----------------------------------------DFHGHGTHTLSTVGGSFVKN   62 (89)
Q Consensus        24 ~~w~~~~~G~gviIgVlDT-----------------------------------------D~~GHGTH~a~taaG~~v~~   62 (89)
                      ..|.....|+||+|+||||                                         |++|||||||++++|+    
T Consensus       137 ~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~----  212 (471)
T 3t41_A          137 ASYDDLPKHANTKIAIIDTGVMKNHDDLKNNFSTDSKNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSAN----  212 (471)
T ss_dssp             GGGGGCCSSCCCCEEEEESCCCTTCTTTTTTBCTTCEECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCB----
T ss_pred             HHHhccCCCCCcEEEEEeCCCCCCChhHhcCcccCCcccccCCCccCCCcccCCCCCCCcCCCCccchhhheeecC----
Confidence            6888888899999999999                                         4678999999999975    


Q ss_pred             cceecccCCceeeecCCCCcEEEEEc
Q 041208           63 VSAFGNVGDGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        63 a~~~G~~~~G~a~G~AP~aria~yKv   88 (89)
                          |     ...|+||+|+|++||+
T Consensus       213 ----g-----~~~GvAp~a~l~~~kv  229 (471)
T 3t41_A          213 ----G-----KLIGVAPNNKFTMYRV  229 (471)
T ss_dssp             ----S-----SSBCSSTTSCEEEEEC
T ss_pred             ----C-----ceeEECCCCeEEEEEe
Confidence                2     1478999999999997


No 7  
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=99.30  E-value=3.3e-13  Score=107.61  Aligned_cols=56  Identities=14%  Similarity=0.097  Sum_probs=46.5

Q ss_pred             CCCcccccCCCCeEEEEecC-------------------------------CCCCCCcceeccccCccccccceecccCC
Q 041208           23 NSLWNKARFGEDVIIGNIDT-------------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGD   71 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT-------------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~   71 (89)
                      ..+|.....|+||+|+||||                               |++|||||||+++|+..         .+.
T Consensus        60 ~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~~~~~~~~~~~~~dp~p~~~~~gHGThVAGiIAa~~---------n~~  130 (600)
T 3hjr_A           60 WWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNVRPGSKNVVTGSDDPTPTDPDTAHGTSVSGIIAAVD---------NAI  130 (600)
T ss_dssp             HHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGBCSCCBCTTTSSSCCCCCSTTCCHHHHHHHHHHCCS---------SSS
T ss_pred             HHHHHcCCCCCCeEEEEEcCCCCCCChhHhhccccCcceeecCCCCCCCCCCCCChHHHHHHHHhEeC---------CCC
Confidence            35788888899999999999                               46799999999999852         122


Q ss_pred             ceeeecCCCCcEEEEEc
Q 041208           72 GQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        72 G~a~G~AP~aria~yKv   88 (89)
                      | ..||||+|+|+.||+
T Consensus       131 g-~~GVAp~A~l~~~rv  146 (600)
T 3hjr_A          131 G-TKGIAPRAQLQGFNL  146 (600)
T ss_dssp             S-CCCSSTTCEEEEECT
T ss_pred             C-cEEeCCCCEEEEEEe
Confidence            2 368999999999997


No 8  
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=99.29  E-value=6e-13  Score=107.04  Aligned_cols=56  Identities=16%  Similarity=0.148  Sum_probs=46.9

Q ss_pred             CCCcccccCCCCeEEEEecC-------------------------------CCCCCCcceeccccCccccccceecccCC
Q 041208           23 NSLWNKARFGEDVIIGNIDT-------------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGD   71 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT-------------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~   71 (89)
                      ..+|.....|+||+|+||||                               |++|||||||+++++. ..+        .
T Consensus        60 ~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~d~~p~d~~~gHGT~vAGiiaa~-~n~--------~  130 (600)
T 2oxa_A           60 WWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNVRPGSKNVVTGSDDPTPTDPDTGHGTSVSGIIAAV-DNA--------I  130 (600)
T ss_dssp             HHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGBCSCCBCTTTCSSCCCCCSTTCCHHHHHHHHHHCC-SSS--------S
T ss_pred             HHHHhcCCCCCCcEEEEecCCcCCCCcchhhccccCceeccCCCCCCCCCCCCCCCccHHHHHhhcc-cCC--------C
Confidence            46898888999999999999                               2679999999999998 211        1


Q ss_pred             ceeeecCCCCcEEEEEc
Q 041208           72 GQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        72 G~a~G~AP~aria~yKv   88 (89)
                      + ..|+||+|+|++||+
T Consensus       131 g-~~GVAp~A~l~~vkv  146 (600)
T 2oxa_A          131 G-TKGIAPRAQLQGFNL  146 (600)
T ss_dssp             S-CCCSSTTCEEEEECT
T ss_pred             c-ceEEccCCceEEEee
Confidence            1 378999999999997


No 9  
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=99.23  E-value=2.7e-12  Score=94.94  Aligned_cols=58  Identities=21%  Similarity=0.160  Sum_probs=48.1

Q ss_pred             CCCcccccCCCCeEEEEecC-------------------------------CCCCCCcceeccccCccccccceecccCC
Q 041208           23 NSLWNKARFGEDVIIGNIDT-------------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGD   71 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT-------------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~   71 (89)
                      +.+|.....|++|+|+||||                               |+.|||||||++++++...+       ..
T Consensus        16 ~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~n-------~~   88 (310)
T 2ixt_A           16 NDTLTSTTGGSGINIAVLDTGVNTSHPDLVNNVEQCKDFTGATTPINNSCTDRNGHGTHVAGTALADGGSD-------QA   88 (310)
T ss_dssp             CTTCCCCCCCTTCEEEEEESCCCTTCTTTTTTEEEEEESSSSSSCEETCCCCSSSHHHHHHHHHHCBCCTT-------SC
T ss_pred             hhhhhccCCCCCcEEEEEecCCCCCCHHHhhcccccccccCCCCCCCCCCCCCCCCHHHHHHHHhccCCCC-------CC
Confidence            46898888899999999999                               56799999999999874221       11


Q ss_pred             ceeeecCCCCcEEEEEc
Q 041208           72 GQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        72 G~a~G~AP~aria~yKv   88 (89)
                       ...|+||+|+|.+||+
T Consensus        89 -g~~GvAp~a~l~~~~v  104 (310)
T 2ixt_A           89 -GIYGVAPDADLWAYKV  104 (310)
T ss_dssp             -SCBCSCTTSEEEEEEC
T ss_pred             -ceEEECCCCEEEEEEE
Confidence             2478999999999997


No 10 
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=99.21  E-value=6.6e-13  Score=100.94  Aligned_cols=32  Identities=16%  Similarity=-0.069  Sum_probs=26.5

Q ss_pred             CCCcceeccccCccccccceecccCCceeeecCCCCcEEEEEc
Q 041208           46 GHGTHTLSTVGGSFVKNVSAFGNVGDGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        46 GHGTH~a~taaG~~v~~a~~~G~~~~G~a~G~AP~aria~yKv   88 (89)
                      |||||||+|++|+..          .+ ..|+||.|+|+++|+
T Consensus       108 gHGThVAGiiag~~~----------~g-~~GvAp~a~l~~~k~  139 (357)
T 4h6x_A          108 DHACHVTSTIVGQEH----------SP-VFGIAPNCRVINMPQ  139 (357)
T ss_dssp             HHHHHHHHHHHCCTT----------SS-CCCSCTTSEEEEEEC
T ss_pred             CcHHHHHHHHhccCC----------CC-ceEeeccceEEeeee
Confidence            699999999998731          11 468999999999996


No 11 
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=99.20  E-value=2.7e-12  Score=94.33  Aligned_cols=56  Identities=23%  Similarity=0.220  Sum_probs=46.9

Q ss_pred             CCCcccccCCCCeEEEEecC-------------------------CCCCCCcceeccccCccccccceecccCCceeeec
Q 041208           23 NSLWNKARFGEDVIIGNIDT-------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRKEG   77 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT-------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~G~   77 (89)
                      +.+|.....|+||+|+||||                         |.+|||||||+++++..         ...+ ..|+
T Consensus        14 ~~~~~~g~~G~gv~VaViDtGid~~h~~l~~~~g~~~~~~~~~~~d~~gHGT~vAgiia~~~---------~~~g-~~Gv   83 (274)
T 1r0r_E           14 DKVQAQGFKGANVKVAVLDTGIQASHPDLNVVGGASFVAGEAYNTDGNGHGTHVAGTVAALD---------NTTG-VLGV   83 (274)
T ss_dssp             HHHHHHTCSCTTCEEEEEESCCCTTCTTCCEEEEEECSTTCCTTCCSSSHHHHHHHHHHCCS---------SSSB-CCCS
T ss_pred             HHHHhcCCCCCCCEEEEEcCCCCCCCHhHcCCCCccccCCCCCCCCCCCCHHHHHHHHHccC---------CCCc-eEEE
Confidence            36788887899999999999                         67899999999999862         1112 4789


Q ss_pred             CCCCcEEEEEc
Q 041208           78 PLKPEWHLIEY   88 (89)
Q Consensus        78 AP~aria~yKv   88 (89)
                      ||+|+|.++|+
T Consensus        84 Ap~a~l~~~~v   94 (274)
T 1r0r_E           84 APSVSLYAVKV   94 (274)
T ss_dssp             STTSEEEEEEC
T ss_pred             CCCCEEEEEEE
Confidence            99999999997


No 12 
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=99.19  E-value=5.2e-12  Score=94.45  Aligned_cols=55  Identities=25%  Similarity=0.343  Sum_probs=45.7

Q ss_pred             CCCcccccCCC--CeEEEEecC--------------------------------CCCCCCcceeccccCccccccceecc
Q 041208           23 NSLWNKARFGE--DVIIGNIDT--------------------------------DFHGHGTHTLSTVGGSFVKNVSAFGN   68 (89)
Q Consensus        23 ~~~w~~~~~G~--gviIgVlDT--------------------------------D~~GHGTH~a~taaG~~v~~a~~~G~   68 (89)
                      +.+|... .|+  +|+|+||||                                |..|||||||+++++..  +    + 
T Consensus        18 ~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~--n----~-   89 (320)
T 2z30_A           18 PSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAANIAWCVSTLRGKVSTKLRDCADQNGHGTHVIGTIAALN--N----D-   89 (320)
T ss_dssp             GGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGGEEEEEECGGGCCBCCHHHHBCSSSHHHHHHHHHHCCS--S----S-
T ss_pred             HHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcccccCccccCCccCCCCCCCCCCCCCHHHHHHHHHccc--C----C-
Confidence            4689877 699  999999999                                67799999999999962  1    1 


Q ss_pred             cCCceeeecCCCCcEEEEEc
Q 041208           69 VGDGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        69 ~~~G~a~G~AP~aria~yKv   88 (89)
                        .| ..|+||+|+|+++|+
T Consensus        90 --~g-~~GvAp~a~l~~~~v  106 (320)
T 2z30_A           90 --IG-VVGVAPGVQIYSVRV  106 (320)
T ss_dssp             --BS-CCCSSTTCEEEEEEC
T ss_pred             --Cc-eEeeCCCCEEEEEEe
Confidence              11 478999999999997


No 13 
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=99.19  E-value=4.1e-12  Score=93.78  Aligned_cols=57  Identities=19%  Similarity=0.255  Sum_probs=46.8

Q ss_pred             CCCcccccCCCCeEEEEecC---------------------------CCCCCCcceeccccCccccccceecccCCceee
Q 041208           23 NSLWNKARFGEDVIIGNIDT---------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRK   75 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT---------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~   75 (89)
                      +.+|.....+++|+|+||||                           |.+|||||||+++++....        ..| ..
T Consensus        21 ~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~--------~~g-~~   91 (280)
T 1dbi_A           21 DYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGKVIKGYDFVDNDYDPMDLNNHGTHVAGIAAAETNN--------ATG-IA   91 (280)
T ss_dssp             HHHTTTCCCCTTCEEEEEESCCCTTSTTTTTTEEEEEETTTTBSCCCCSSSHHHHHHHHHHCCCSS--------SSS-CC
T ss_pred             HHHHhhcCCCCCCEEEEEeCCcCCCChhhccCcccceeccCCCCCCCCCCCcHHHHHHHHhCcCCC--------CCc-ce
Confidence            46888877666999999999                           6789999999999987422        112 46


Q ss_pred             ecCCCCcEEEEEc
Q 041208           76 EGPLKPEWHLIEY   88 (89)
Q Consensus        76 G~AP~aria~yKv   88 (89)
                      |+||+|+|+++|+
T Consensus        92 GvAp~a~l~~~kv  104 (280)
T 1dbi_A           92 GMAPNTRILAVRA  104 (280)
T ss_dssp             CSSSSCEEEEEEC
T ss_pred             EeCCCCEEEEEEE
Confidence            8999999999997


No 14 
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=99.19  E-value=3.9e-12  Score=93.59  Aligned_cols=56  Identities=27%  Similarity=0.295  Sum_probs=46.9

Q ss_pred             CCCcccccCCCCeEEEEecC------------------------CCCCCCcceeccccCccccccceecccCCceeeecC
Q 041208           23 NSLWNKARFGEDVIIGNIDT------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRKEGP   78 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~G~A   78 (89)
                      +.+|.....|+||+|+||||                        |++|||||||+++++..  +       ..+ ..|+|
T Consensus        14 ~~a~~~g~~G~gv~VaViDtGi~~h~~l~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~--~-------~~~-~~GvA   83 (269)
T 1gci_A           14 PAAHNRGLTGSGVKVAVLDTGISTHPDLNIRGGASFVPGEPSTQDGNGHGTHVAGTIAALN--N-------SIG-VLGVA   83 (269)
T ss_dssp             HHHHHTTCSCTTCEEEEEESCCCCCTTCCEEEEEECSTTCCSCSCSSSHHHHHHHHHHCCC--S-------SSB-CCCSS
T ss_pred             HHHHhcCCCCCCCEEEEECCCCCCCHhhcccCCcccCCCCCCCCCCCCChHHHHHHHhcCc--C-------CCC-cEEeC
Confidence            36788887899999999999                        67899999999999972  1       111 47899


Q ss_pred             CCCcEEEEEc
Q 041208           79 LKPEWHLIEY   88 (89)
Q Consensus        79 P~aria~yKv   88 (89)
                      |+|+|.++|+
T Consensus        84 p~a~l~~~~v   93 (269)
T 1gci_A           84 PSAELYAVKV   93 (269)
T ss_dssp             TTCEEEEEEC
T ss_pred             CCCEEEEEEe
Confidence            9999999997


No 15 
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=99.19  E-value=3.5e-12  Score=94.16  Aligned_cols=56  Identities=23%  Similarity=0.239  Sum_probs=46.9

Q ss_pred             CCCcccccCCCCeEEEEecC--------------------------CCCCCCcceeccccCccccccceecccCCceeee
Q 041208           23 NSLWNKARFGEDVIIGNIDT--------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRKE   76 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT--------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~G   76 (89)
                      +.+|.....|++|+|+||||                          |.+|||||||+++++..         ...+ ..|
T Consensus        14 ~~~~~~g~~G~gv~VaViDtGid~~h~~l~~~~g~~~~~~~~~~~~d~~gHGT~vAgiia~~~---------~~~g-~~G   83 (281)
T 1to2_E           14 PALHSQGYTGSNVKVAVIDSGIDSSHPDLKVAGGASMVPSETNPFQDNNSHGTHVAGTVAALN---------NSIG-VLG   83 (281)
T ss_dssp             HHHHHHTCSCTTCEEEEEESCCCTTCTTCCEEEEEECCTTCCCTTCCSSSHHHHHHHHHHCCS---------SSSS-BCC
T ss_pred             HHHHhcCCCCCCCEEEEEcCCCCCCCHHHcCcCCccccCCCCCCCCCCCCcHHHHHHHHhccC---------CCCc-cee
Confidence            36788887899999999999                          67899999999999962         1112 478


Q ss_pred             cCCCCcEEEEEc
Q 041208           77 GPLKPEWHLIEY   88 (89)
Q Consensus        77 ~AP~aria~yKv   88 (89)
                      +||+|+|.++|+
T Consensus        84 vAp~a~l~~~kv   95 (281)
T 1to2_E           84 VAPSASLYAVKV   95 (281)
T ss_dssp             SSTTSEEEEEEC
T ss_pred             eCCCCEEEEEEE
Confidence            999999999997


No 16 
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=99.18  E-value=5e-12  Score=92.50  Aligned_cols=51  Identities=27%  Similarity=0.344  Sum_probs=45.6

Q ss_pred             CCCcccccCCCCeEEEEecC-------------------------CCCCCCcceeccccCccccccceecccCCceeeec
Q 041208           23 NSLWNKARFGEDVIIGNIDT-------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRKEG   77 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT-------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~G~   77 (89)
                      ...|.....|+||.|+||||                         |.+|||||||++++|+.               .|+
T Consensus        21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~~~~~~~~~~~~~~d~~gHGT~vAgiiag~~---------------~Gv   85 (276)
T 4dzt_A           21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGRARVGYDALGGNGQDCNGHGTHVAGTIGGVT---------------YGV   85 (276)
T ss_dssp             CSCEECSCCCTTCEEEEEESCCCTTCGGGTTCEEEEEETTSSCSCCSSSHHHHHHHHHHCTT---------------TCS
T ss_pred             ccceecCCCCCCcEEEEEccCCCCCChhHccCeeccccCCCCCCCCCCCCHHHHHHHHHccc---------------cCC
Confidence            46788888899999999999                         78899999999999862               468


Q ss_pred             CCCCcEEEEEc
Q 041208           78 PLKPEWHLIEY   88 (89)
Q Consensus        78 AP~aria~yKv   88 (89)
                      ||+|+|..+|+
T Consensus        86 Ap~a~l~~~~v   96 (276)
T 4dzt_A           86 AKAVNLYAVRV   96 (276)
T ss_dssp             STTCEEEEEEC
T ss_pred             CCCCEEEEEEE
Confidence            99999999997


No 17 
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=99.18  E-value=2.8e-12  Score=96.61  Aligned_cols=56  Identities=36%  Similarity=0.545  Sum_probs=46.9

Q ss_pred             CCCcccccCCCCeEEEEecC-------------------------------CCCCCCcceeccccCccccccceecccCC
Q 041208           23 NSLWNKARFGEDVIIGNIDT-------------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGD   71 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT-------------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~   71 (89)
                      +.+|.....|+||+|+||||                               |+.|||||||++++|+.  +    +   .
T Consensus        31 ~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~VAgiia~~~--~----~---~  101 (327)
T 2x8j_A           31 PAVWRASAKGAGQIIGVIDTGCQVDHPDLAERIIGGVNLTTDYGGDETNFSDNNGHGTHVAGTVAAAE--T----G---S  101 (327)
T ss_dssp             HHHHHHHGGGTTCEEEEEESCCCTTCTTTGGGEEEEEECSSGGGGCTTCCCCSSSHHHHHHHHHHCCC--C----S---S
T ss_pred             HHHHhcCCCCCCCEEEEEcCCCCCCChhHhhcccCCccccCCCCCCCCCCCCCCCchHHHHHHHhccC--C----C---C
Confidence            36788887899999999999                               56799999999999973  1    1   1


Q ss_pred             ceeeecCCCCcEEEEEc
Q 041208           72 GQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        72 G~a~G~AP~aria~yKv   88 (89)
                      | ..|+||+|+|+++|+
T Consensus       102 g-~~GvAp~a~l~~~kv  117 (327)
T 2x8j_A          102 G-VVGVAPKADLFIIKA  117 (327)
T ss_dssp             B-CCCSSTTCEEEEEEC
T ss_pred             C-cEeeCCCCEEEEEEe
Confidence            2 478999999999997


No 18 
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=99.17  E-value=6.3e-12  Score=93.21  Aligned_cols=51  Identities=31%  Similarity=0.294  Sum_probs=45.1

Q ss_pred             CCCcccccCCCCeEEEEecC---------------------------CCCCCCcceeccccCccccccceecccCCceee
Q 041208           23 NSLWNKARFGEDVIIGNIDT---------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRK   75 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT---------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~   75 (89)
                      ...|.....|++|+|+||||                           |+.|||||||++++|+.               .
T Consensus        19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~---------------~   83 (284)
T 1sh7_A           19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGRSVSGYDFVDNDADSSDCNGHGTHVAGTIGGSQ---------------Y   83 (284)
T ss_dssp             CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTCEEEEEETTTTBSCCCCSSSHHHHHHHHHHCTT---------------T
T ss_pred             hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCCccccccccCCCCCCCCCCCcHHHHHHHHhccc---------------C
Confidence            46788888899999999999                           67899999999999862               3


Q ss_pred             ecCCCCcEEEEEc
Q 041208           76 EGPLKPEWHLIEY   88 (89)
Q Consensus        76 G~AP~aria~yKv   88 (89)
                      |+||+|+|+.+|+
T Consensus        84 GvAp~a~l~~~kv   96 (284)
T 1sh7_A           84 GVAKNVNIVGVRV   96 (284)
T ss_dssp             CSSTTCEEEEEEC
T ss_pred             CcCCCCEEEEEEe
Confidence            6899999999997


No 19 
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=99.17  E-value=6.2e-12  Score=92.56  Aligned_cols=51  Identities=29%  Similarity=0.313  Sum_probs=45.2

Q ss_pred             CCCcccccCCCCeEEEEecC---------------------------CCCCCCcceeccccCccccccceecccCCceee
Q 041208           23 NSLWNKARFGEDVIIGNIDT---------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRK   75 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT---------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~   75 (89)
                      ...|.....|+||+|+||||                           |+.|||||||++++|+.               .
T Consensus        21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~d~~~~~~~~~d~~gHGT~vAgiia~~~---------------~   85 (278)
T 2b6n_A           21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGRASSGYDFIDNDYDATDCNGHGTHVAGTIGGST---------------Y   85 (278)
T ss_dssp             CSEEECSCCCTTCEEEEEESCCCTTCGGGTTCEEEEEETTTTBSCCCCSSSHHHHHHHHHHCTT---------------T
T ss_pred             chhcccCCCCCCCEEEEEeCCCCCCChhHhcccccCeecCCCCCCCCCCCCcHHHHHHHHHCCC---------------c
Confidence            46788888899999999999                           67899999999999862               3


Q ss_pred             ecCCCCcEEEEEc
Q 041208           76 EGPLKPEWHLIEY   88 (89)
Q Consensus        76 G~AP~aria~yKv   88 (89)
                      |+||+|+|..+|+
T Consensus        86 GvAp~a~i~~~~v   98 (278)
T 2b6n_A           86 GVAKNVNVVGVRV   98 (278)
T ss_dssp             CSSTTCEEEEEEC
T ss_pred             CCCCCCeEEEEEE
Confidence            6899999999997


No 20 
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=99.16  E-value=3.5e-12  Score=93.43  Aligned_cols=48  Identities=29%  Similarity=0.344  Sum_probs=41.7

Q ss_pred             CcccccCCCCeEEEEecC------------------------CCCCCCcceeccccCccccccceecccCCceeeecCCC
Q 041208           25 LWNKARFGEDVIIGNIDT------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRKEGPLK   80 (89)
Q Consensus        25 ~w~~~~~G~gviIgVlDT------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~G~AP~   80 (89)
                      .|... .|+||+|+||||                        |.+|||||||++++++.               .|+||+
T Consensus        25 ~~~~~-~G~gv~VaViDtGvd~~h~~l~~~~~~~~~~~~~~~d~~gHGT~vAgii~~~~---------------~GvAp~   88 (279)
T 3f7m_A           25 AYDTS-AGAGACVYVIDTGVEDTHPDFEGRAKQIKSYASTARDGHGHGTHCAGTIGSKT---------------WGVAKK   88 (279)
T ss_dssp             EECTT-TTTTEEEEEEESCCCTTCGGGTTCEEEEEECSSSSSCSSSHHHHHHHHHHCTT---------------TCSSTT
T ss_pred             eecCC-CCCCCEEEEEcCCCCCCChhhccccccccCCCCCCCCCCCcHHHHHHHHhcCc---------------cccCCC
Confidence            45544 799999999999                        78899999999998862               469999


Q ss_pred             CcEEEEEc
Q 041208           81 PEWHLIEY   88 (89)
Q Consensus        81 aria~yKv   88 (89)
                      |+|.++|+
T Consensus        89 a~l~~~~v   96 (279)
T 3f7m_A           89 VSIFGVKV   96 (279)
T ss_dssp             CEEEEEEC
T ss_pred             CEEEEEEe
Confidence            99999997


No 21 
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=99.16  E-value=9.4e-12  Score=95.52  Aligned_cols=55  Identities=25%  Similarity=0.343  Sum_probs=45.9

Q ss_pred             CCCcccccCCCC--eEEEEecC--------------------------------CCCCCCcceeccccCccccccceecc
Q 041208           23 NSLWNKARFGED--VIIGNIDT--------------------------------DFHGHGTHTLSTVGGSFVKNVSAFGN   68 (89)
Q Consensus        23 ~~~w~~~~~G~g--viIgVlDT--------------------------------D~~GHGTH~a~taaG~~v~~a~~~G~   68 (89)
                      +.+|... .|+|  |+|+||||                                |++|||||||++++|..  +    + 
T Consensus        93 ~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~--n----~-  164 (395)
T 2z2z_A           93 PSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAANIAWCVSTLRGKVSTKLRDCADQNGHGTHVIGTIAALN--N----D-  164 (395)
T ss_dssp             GGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGGEEEEEECGGGCCBCCHHHHBCSSSHHHHHHHHHHCCC--S----S-
T ss_pred             HHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhccccCccccCCcccCCCCCCCCCCCCHHHHHHHHHeec--C----C-
Confidence            4678877 7999  99999999                                67899999999999872  1    1 


Q ss_pred             cCCceeeecCCCCcEEEEEc
Q 041208           69 VGDGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        69 ~~~G~a~G~AP~aria~yKv   88 (89)
                        .| ..|+||+|+|++||+
T Consensus       165 --~g-~~GvAp~a~l~~~kv  181 (395)
T 2z2z_A          165 --IG-VVGVAPGVQIYSVRV  181 (395)
T ss_dssp             --SS-CCCSSTTCEEEEEEC
T ss_pred             --Cc-eEEECCCCEEEEEEE
Confidence              11 478999999999997


No 22 
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=99.15  E-value=2.4e-12  Score=94.25  Aligned_cols=47  Identities=17%  Similarity=0.141  Sum_probs=38.3

Q ss_pred             CC-CCeEEEEecC-----------------------------CCCCCCcceeccccCccccccceecccCCceeeecCCC
Q 041208           31 FG-EDVIIGNIDT-----------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRKEGPLK   80 (89)
Q Consensus        31 ~G-~gviIgVlDT-----------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~G~AP~   80 (89)
                      .| ++|.|+||||                             |.+|||||||++++|+..          + ...|+||+
T Consensus         5 ~G~~gV~VaViDtGid~~Hpdl~g~~~~~~~~~~~~~~~~d~~~~gHGT~VAGiiag~~~----------~-~~~GvAp~   73 (282)
T 3zxy_A            5 KGDHNIRVAILDGPVDIAHPCFQGADLTVLPTLAPTAARSDGFMSAHGTHVASIIFGQPE----------T-SVPGIAPQ   73 (282)
T ss_dssp             CCCTTSEEEEEESCCCTTSGGGTTCEEEECCCSSCCCCCTTCHHHHHHHHHHHHHHCCTT----------S-SSCCSSTT
T ss_pred             cCCCCCEEEEEcCCCCCCChhHCCCeeecCcCCCCCCCCCCCCCCCcccceeehhhccCC----------c-eeeeeccc
Confidence            36 6999999999                             235899999999998731          1 14689999


Q ss_pred             CcEEEEEc
Q 041208           81 PEWHLIEY   88 (89)
Q Consensus        81 aria~yKv   88 (89)
                      |+|.++||
T Consensus        74 a~l~~~kv   81 (282)
T 3zxy_A           74 CRGLIVPI   81 (282)
T ss_dssp             SEEEEEEC
T ss_pred             cceEeeEe
Confidence            99999997


No 23 
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=99.14  E-value=8.1e-12  Score=91.98  Aligned_cols=56  Identities=23%  Similarity=0.301  Sum_probs=46.2

Q ss_pred             CCCcccccCCCCeEEEEecC---------------------------CCCCCCcceeccccCccccccceecccCCceee
Q 041208           23 NSLWNKARFGEDVIIGNIDT---------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRK   75 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT---------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~   75 (89)
                      +.+|... .|++|.|+||||                           |.+|||||||+++++....+        .| ..
T Consensus        21 ~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~n~--------~g-~~   90 (279)
T 1thm_A           21 PQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGKVVGGWDFVDNDSTPQNGNGHGTHCAGIAAAVTNNS--------TG-IA   90 (279)
T ss_dssp             HHHHTTC-CCTTCEEEEEESCCCTTCTTTTTTEEEEEETTTTBSCCCCSSSHHHHHHHHHHCCCSSS--------SS-CC
T ss_pred             HHHHhcC-CCCCCEEEEEccCCCCCCcchhcCccccccccCCCCCCCCCCCcHHHHHHHHhCccCCC--------Cc-cE
Confidence            4678776 499999999999                           67899999999999975321        12 46


Q ss_pred             ecCCCCcEEEEEc
Q 041208           76 EGPLKPEWHLIEY   88 (89)
Q Consensus        76 G~AP~aria~yKv   88 (89)
                      |+||+|+|..+|+
T Consensus        91 GvAp~a~l~~~~v  103 (279)
T 1thm_A           91 GTAPKASILAVRV  103 (279)
T ss_dssp             CSSTTCEEEEEEC
T ss_pred             EeCCCCEEEEEEe
Confidence            8999999999997


No 24 
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=99.10  E-value=1.5e-11  Score=97.43  Aligned_cols=57  Identities=18%  Similarity=0.129  Sum_probs=47.2

Q ss_pred             CCCcccccCCCCeEEEEecC--------------------------------CCCCCCcceeccccCccccccceecccC
Q 041208           23 NSLWNKARFGEDVIIGNIDT--------------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVG   70 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT--------------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~   70 (89)
                      ..+|.....|+||+|+||||                                |++|||||||+++++....+        
T Consensus        44 ~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~~~~~~~d~~~~~~~~~p~~d~~gHGT~vAGiiaa~~~n~--------  115 (503)
T 2id4_A           44 LDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFCAEGSWDFNDNTNLPKPRLSDDYHGTRCAGEIAAKKGNN--------  115 (503)
T ss_dssp             HHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTBCGGGCEETTTTBSCCCCCSTTTTHHHHHHHHHHCCSSSS--------
T ss_pred             HHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcccccCcccCCCCCCCCCCCCCCCChHHHHHHHHHhccCCC--------
Confidence            46898888899999999999                                46799999999999874221        


Q ss_pred             CceeeecCCCCcEEEEEc
Q 041208           71 DGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        71 ~G~a~G~AP~aria~yKv   88 (89)
                      .+ ..|+||+|+|..+|+
T Consensus       116 ~~-~~GvAp~a~i~~~rv  132 (503)
T 2id4_A          116 FC-GVGVGYNAKISGIRI  132 (503)
T ss_dssp             SS-CCCTTTTSEEEEEEC
T ss_pred             CC-cEEECCCCEEEEEEe
Confidence            11 368999999999997


No 25 
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=99.10  E-value=1.5e-11  Score=96.42  Aligned_cols=57  Identities=12%  Similarity=0.177  Sum_probs=47.0

Q ss_pred             CCCcccccCCCCeEEEEecC-----------------------------------CCCCCCcceeccccCccccccceec
Q 041208           23 NSLWNKARFGEDVIIGNIDT-----------------------------------DFHGHGTHTLSTVGGSFVKNVSAFG   67 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT-----------------------------------D~~GHGTH~a~taaG~~v~~a~~~G   67 (89)
                      ..+|.....|+||+|+||||                                   |.+|||||||+++++....+     
T Consensus        28 ~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~~~~~~d~~~~~~~p~~~~~~~d~~gHGT~vAGiiaa~~~n~-----  102 (471)
T 1p8j_A           28 KEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNG-----  102 (471)
T ss_dssp             HHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBCGGGCEETTTTBSCCCCCCCTTCTTCHHHHHHHHHHCCSSSS-----
T ss_pred             HHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccCccCcccccCCCCCCCCccCCCCCCCcHHHHHHHHHeeccCC-----
Confidence            46898888899999999999                                   34699999999999874221     


Q ss_pred             ccCCceeeecCCCCcEEEEEc
Q 041208           68 NVGDGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        68 ~~~~G~a~G~AP~aria~yKv   88 (89)
                         .+ ..|+||+|+|+.+|+
T Consensus       103 ---~g-~~GvAp~a~i~~~rv  119 (471)
T 1p8j_A          103 ---VC-GVGVAYNARIGGVRM  119 (471)
T ss_dssp             ---SS-CCCTTTTSEEEEEEC
T ss_pred             ---CC-CEEECCCCeEEEEEc
Confidence               11 478999999999997


No 26 
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=99.06  E-value=2.9e-11  Score=89.48  Aligned_cols=44  Identities=32%  Similarity=0.339  Sum_probs=39.6

Q ss_pred             cCCCCeEEEEecC------------------------CCCCCCcceeccccCccccccceecccCCceeeecCCCCcEEE
Q 041208           30 RFGEDVIIGNIDT------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRKEGPLKPEWHL   85 (89)
Q Consensus        30 ~~G~gviIgVlDT------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~G~AP~aria~   85 (89)
                      ..|+||+|+||||                        |++|||||||++++|+.               .|+||+|+|..
T Consensus        28 ~~G~gv~VaViDsGvd~~H~~l~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~---------------~GvAp~a~i~~   92 (279)
T 2pwa_A           28 SAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSRT---------------YGVAKKTQLFG   92 (279)
T ss_dssp             TTTTTEEEEEEESCCCTTCGGGTTCEEEEEESSSCSSCSSSHHHHHHHHHHCTT---------------TCSSTTCEEEE
T ss_pred             CCCCCCEEEEEeCCCCCCChhHhCccccccCCCCCCCCCCCCHHHHHHHHHhcc---------------cccCCCCEEEE
Confidence            5699999999999                        78899999999999861               46899999999


Q ss_pred             EEc
Q 041208           86 IEY   88 (89)
Q Consensus        86 yKv   88 (89)
                      +|+
T Consensus        93 ~~v   95 (279)
T 2pwa_A           93 VKV   95 (279)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            997


No 27 
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=99.04  E-value=8e-12  Score=93.83  Aligned_cols=52  Identities=13%  Similarity=0.053  Sum_probs=43.9

Q ss_pred             CCCcccccCCC--CeEEEEecC-------------------------------CCCCCCcceeccccCccccccceeccc
Q 041208           23 NSLWNKARFGE--DVIIGNIDT-------------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNV   69 (89)
Q Consensus        23 ~~~w~~~~~G~--gviIgVlDT-------------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~   69 (89)
                      +.+|.. ..|+  ||+|+||||                               |+.|||||||++++++       .|  
T Consensus        33 ~~aw~~-~~G~~~gv~VaViDsGid~Hp~l~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~-------~g--  102 (347)
T 2iy9_A           33 TETTMS-LTDKNTPVVVSVVDSGVAFIGGLSDSEFAKFSFTQDGSPFPVKKSEALYIHGTAMASLIASR-------YG--  102 (347)
T ss_dssp             CHHHHH-TSCTTSCCEEEEEESCCCCCGGGTTCEEEEEECBTTCCSSCCSSSHHHHHHHHHHHHHHHCS-------SS--
T ss_pred             HHHHHH-hcCCCCCCEEEEEcCCCcCChhhhcCcccCCcccCCCCCCCCCCCCCCCCcHHHHHHHHhcc-------cC--
Confidence            467877 6799  999999999                               2457999999999998       23  


Q ss_pred             CCceeeecCCCCcEEEEEc
Q 041208           70 GDGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        70 ~~G~a~G~AP~aria~yKv   88 (89)
                          ..|+||+|+|.++|+
T Consensus       103 ----~~GvAp~a~l~~~~v  117 (347)
T 2iy9_A          103 ----IYGVYPHALISSRRV  117 (347)
T ss_dssp             ----SCCSSTTCEEEEEEC
T ss_pred             ----CcccCCCCEEEEEEE
Confidence                367999999999997


No 28 
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=99.02  E-value=7.8e-11  Score=91.55  Aligned_cols=54  Identities=20%  Similarity=0.257  Sum_probs=43.6

Q ss_pred             CCCcccccCCCCeEEEEecC-----------------------------CCCCCCcceeccccCccccccceecccCCce
Q 041208           23 NSLWNKARFGEDVIIGNIDT-----------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQ   73 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT-----------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~   73 (89)
                      +.+|...  |++|+|+||||                             |++|||||||+++++...         ..| 
T Consensus        14 ~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~---------~~g-   81 (441)
T 1y9z_A           14 TVLSDSQ--AGNRTICIIDSGYDRSHNDLNANNVTGTNNSGTGNWYQPGNNNAHGTHVAGTIAAIAN---------NEG-   81 (441)
T ss_dssp             SSSCCTT--GGGCEEEEEESCCCTTSTTTTTSEEEECCCTTSCCTTCCCSSCCHHHHHHHHHHCCCS---------SSB-
T ss_pred             hhhhhcC--CCCcEEEEEcCCCCCCChhHhcCcccCcccCCCCCCCCCCCCCCcHHHHHHHHhcccC---------CCC-
Confidence            4688754  77999999999                             457999999999999741         122 


Q ss_pred             eeecCCCC--cEEEEEc
Q 041208           74 RKEGPLKP--EWHLIEY   88 (89)
Q Consensus        74 a~G~AP~a--ria~yKv   88 (89)
                      ..|+||+|  +|++|||
T Consensus        82 ~~GvAP~a~~~l~~~kv   98 (441)
T 1y9z_A           82 VVGVMPNQNANIHIVKV   98 (441)
T ss_dssp             CCCSSCSSCSEEEEEEC
T ss_pred             ceEecCCCCCEEEEEEE
Confidence            57899995  8999997


No 29 
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=99.01  E-value=5e-11  Score=92.18  Aligned_cols=53  Identities=26%  Similarity=0.353  Sum_probs=44.3

Q ss_pred             CCcc-cccCCCCeEEEEecC--------------------------------CCCCCCcceeccccCccccccceecccC
Q 041208           24 SLWN-KARFGEDVIIGNIDT--------------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVG   70 (89)
Q Consensus        24 ~~w~-~~~~G~gviIgVlDT--------------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~   70 (89)
                      .+|. ....|+||+|+||||                                |++|||||||++++|+        | . 
T Consensus        12 ~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~i~~~~~~~~~~~~~d~~gHGT~VAgiiag~--------g-~-   81 (434)
T 1wmd_A           12 VAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGKITALYALGRTNNANDTNGHGTHVAGSVLGN--------G-S-   81 (434)
T ss_dssp             HHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTCEEEEEETTTTTCCCCSSSHHHHHHHHHHCC--------S-S-
T ss_pred             hhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCCEeeeccccCCCCCCCCCCcHHHHHHHHHcC--------C-C-
Confidence            5776 466799999999998                                5679999999999985        2 1 


Q ss_pred             CceeeecCCCCcEEEEEc
Q 041208           71 DGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        71 ~G~a~G~AP~aria~yKv   88 (89)
                       + ..|+||.|+|.++|+
T Consensus        82 -~-~~GvAp~a~l~~~~v   97 (434)
T 1wmd_A           82 -T-NKGMAPQANLVFQSI   97 (434)
T ss_dssp             -S-SCCSSTTSEEEEEEC
T ss_pred             -C-ceeeCCCCEEEEEEe
Confidence             1 468999999999997


No 30 
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=99.01  E-value=3.3e-11  Score=100.42  Aligned_cols=50  Identities=20%  Similarity=0.163  Sum_probs=0.0

Q ss_pred             CCcccccCCCCeEEEEecC----------------------------------CCCCCCcceeccccCccccccceeccc
Q 041208           24 SLWNKARFGEDVIIGNIDT----------------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNV   69 (89)
Q Consensus        24 ~~w~~~~~G~gviIgVlDT----------------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~   69 (89)
                      ..|.....|+||+|+||||                                  |++|||||||+|++|+.          
T Consensus       169 ~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~~~~~~~~~d~dg~~~~~~~~D~~GHGTHVAGiIAg~~----------  238 (692)
T 2p4e_P          169 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVMVTDFENVPEEDGTRFHRQASKCDSHGTHLAGVVSGRD----------  238 (692)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccCCCCCCcEEEEEcCCCCCCChhhcCceEecccccccCCCCCcccCCCCCCCCcHHHhhhHhhcCC----------
Confidence            3677777899999999999                                  24699999999999862          


Q ss_pred             CCceeeecCCCCcEEEEEc
Q 041208           70 GDGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        70 ~~G~a~G~AP~aria~yKv   88 (89)
                           .|+||+|+|++|||
T Consensus       239 -----~GVAP~A~L~~vKV  252 (692)
T 2p4e_P          239 -----AGVAKGASMRSLRV  252 (692)
T ss_dssp             -------------------
T ss_pred             -----CccCCCCEEEEEEe
Confidence                 47999999999997


No 31 
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=99.00  E-value=6.6e-11  Score=88.28  Aligned_cols=57  Identities=19%  Similarity=0.315  Sum_probs=46.3

Q ss_pred             CCCcccccCCCCeEEEEecC--------------------------C--------------------------------C
Q 041208           23 NSLWNKARFGEDVIIGNIDT--------------------------D--------------------------------F   44 (89)
Q Consensus        23 ~~~w~~~~~G~gviIgVlDT--------------------------D--------------------------------~   44 (89)
                      +.+|.....|+||+|+||||                          |                                .
T Consensus        22 ~~aw~~g~~G~gV~VaViDtGi~~hp~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  101 (340)
T 3lpc_A           22 DKVWDMGFTGQNVVVAVVDTGILHHRDLNANVLPGYDFISNSQISLDGDGRDADPFDEGDWFDNWACGGRPDPRKERSDS  101 (340)
T ss_dssp             HHHHHHTCSCTTCEEEEEESCBCCCTTTGGGBCCCEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTSCTTCGGGSCBCC
T ss_pred             HHHHHhcCCCCCeEEEEEcCCCCCChhhhcccccCccccCCccccccCCCccCCccccccccccccccCCCCcccCCCCC
Confidence            46899888899999999999                          1                                1


Q ss_pred             CCCCcceeccccCccccccceecccCCceeeecCCCCcEEEEEc
Q 041208           45 HGHGTHTLSTVGGSFVKNVSAFGNVGDGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        45 ~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~G~AP~aria~yKv   88 (89)
                      +|||||||++++|....+        .| ..|+||.|+|+++|+
T Consensus       102 ~gHGT~vAgiia~~~~~~--------~g-~~GvAp~a~l~~~~v  136 (340)
T 3lpc_A          102 SWHGSHVAGTIAAVTNNR--------IG-VAGVAYGAKVVPVRA  136 (340)
T ss_dssp             CCHHHHHHHHHHCCCSSS--------SS-CCCTTTTSEEEEEEC
T ss_pred             CCCHHHHHHHHHccCCCC--------Cc-ceeecCCCEEEEEEE
Confidence            359999999999975321        12 478999999999997


No 32 
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=98.99  E-value=7.3e-11  Score=97.72  Aligned_cols=52  Identities=23%  Similarity=0.325  Sum_probs=43.0

Q ss_pred             cccccCCCCeEEEEecC--------------------------------CCCCCCcceeccccCccccccceecccCCce
Q 041208           26 WNKARFGEDVIIGNIDT--------------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQ   73 (89)
Q Consensus        26 w~~~~~G~gviIgVlDT--------------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~   73 (89)
                      |.. ..|+||+|+||||                                |.+|||||||++++++.  +    +   .| 
T Consensus       148 w~~-~tG~gV~VAVIDTGVd~~HpdL~~~~~~g~~~~~~~~~p~~~d~~d~~gHGThVAGiIAa~~--n----g---~g-  216 (671)
T 1r6v_A          148 WEE-ASGTNIIVAVVDTGVDGTHPDLEGQVIAGYRPAFDEELPAGTDSSYGGSAGTHVAGTIAAKK--D----G---KG-  216 (671)
T ss_dssp             HHH-CSCTTCEEEEEESCCBTTSGGGTTTBCCEEEGGGTEEECTTCBCCTTCSHHHHHHHHHHCCC--S----S---SS-
T ss_pred             hhc-cCCCCCEEEEEeCCCCCCCccccccEEecccccCCCcCCCCCCCccCCCcchhhhhhhhccC--C----C---Cc-
Confidence            776 6799999999999                                24689999999999873  1    1   22 


Q ss_pred             eeecCCCCcEEEEEc
Q 041208           74 RKEGPLKPEWHLIEY   88 (89)
Q Consensus        74 a~G~AP~aria~yKv   88 (89)
                      ..|+||+|+|+++|+
T Consensus       217 v~GVAP~A~I~~vkv  231 (671)
T 1r6v_A          217 IVGVAPGAKIMPIVI  231 (671)
T ss_dssp             CCCSCTTSEEEEEES
T ss_pred             eEEECCCCEEEEEEe
Confidence            478999999999997


No 33 
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=98.92  E-value=1.6e-10  Score=94.18  Aligned_cols=50  Identities=20%  Similarity=0.163  Sum_probs=38.3

Q ss_pred             CCcccccCCCCeEEEEecC----------------------------------CCCCCCcceeccccCccccccceeccc
Q 041208           24 SLWNKARFGEDVIIGNIDT----------------------------------DFHGHGTHTLSTVGGSFVKNVSAFGNV   69 (89)
Q Consensus        24 ~~w~~~~~G~gviIgVlDT----------------------------------D~~GHGTH~a~taaG~~v~~a~~~G~~   69 (89)
                      ..|.....|+||+|+||||                                  |.+|||||||+|++|+.          
T Consensus        17 ~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~~~~~~~~v~~~dg~~f~~~~~D~~GHGThVAGIIag~~----------   86 (546)
T 2qtw_B           17 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVMVTDFENVPEEDGTRFHRQASKCDSHGTHLAGVVSGRD----------   86 (546)
T ss_dssp             -------CCTTSEEEEEESCCCTTSTTTTTTEEEEEEECCCCCC-------CTTTTHHHHHHHHHHHCTT----------
T ss_pred             hhcccCCCCCCcEEEEECCCCCCCChHHcccccccCcccccCCCCccccCCCCCCCChHHHHHHHHhccC----------
Confidence            3677777899999999999                                  34689999999999872          


Q ss_pred             CCceeeecCCCCcEEEEEc
Q 041208           70 GDGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        70 ~~G~a~G~AP~aria~yKv   88 (89)
                           .|+||+|+|++|||
T Consensus        87 -----~GVAP~A~L~~vkV  100 (546)
T 2qtw_B           87 -----AGVAKGASMRSLRV  100 (546)
T ss_dssp             -----TCSSTTCEEEEEEC
T ss_pred             -----CCcCCCCEEEEEEE
Confidence                 46899999999997


No 34 
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=98.46  E-value=2.5e-08  Score=88.13  Aligned_cols=36  Identities=17%  Similarity=0.088  Sum_probs=29.0

Q ss_pred             CCCCCCcceeccccCccccccceecccCCceeeecCCCCcEEEEEc
Q 041208           43 DFHGHGTHTLSTVGGSFVKNVSAFGNVGDGQRKEGPLKPEWHLIEY   88 (89)
Q Consensus        43 D~~GHGTH~a~taaG~~v~~a~~~G~~~~G~a~G~AP~aria~yKv   88 (89)
                      |++||||||||+++|.. .+   .|      ..|+||.|+|+++|+
T Consensus       268 D~~GHGThVAGIIAa~~-N~---~g------~~GVAP~AkI~~vKV  303 (1354)
T 3lxu_X          268 MSSPHGTHVSSIASGNH-SS---RD------VDGVAPNAKIVSMTI  303 (1354)
T ss_dssp             CCCHHHHHHHHHHCCCC-SS---SS------SCCSCTTCEEEEEEC
T ss_pred             CCCCcHHHHHHHHhcCC-CC---CC------ceeecCCCEEEEEEe
Confidence            34699999999999985 21   11      478999999999997


No 35 
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=72.76  E-value=1.1  Score=36.04  Aligned_cols=16  Identities=0%  Similarity=-0.346  Sum_probs=13.9

Q ss_pred             eeeecCCCCcEEEEEc
Q 041208           73 QRKEGPLKPEWHLIEY   88 (89)
Q Consensus        73 ~a~G~AP~aria~yKv   88 (89)
                      .+.|+||.|+|.+||+
T Consensus       273 ~~~gvAp~a~i~~~~~  288 (552)
T 1t1e_A          273 VAGALAPGAKIAVYFA  288 (552)
T ss_dssp             HHHHHCTTSEEEEEEC
T ss_pred             hhhccCCCCeEEEEEc
Confidence            3578999999999986


No 36 
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=34.47  E-value=30  Score=31.21  Aligned_cols=12  Identities=42%  Similarity=0.526  Sum_probs=11.3

Q ss_pred             CCCCeEEEEecC
Q 041208           31 FGEDVIIGNIDT   42 (89)
Q Consensus        31 ~G~gviIgVlDT   42 (89)
                      -|+||+|+||||
T Consensus        34 dGrgv~iai~Dt   45 (1354)
T 3lxu_X           34 DGRDVTIAIFDS   45 (1354)
T ss_dssp             SSTTCEEEEEES
T ss_pred             CCCccEEEEEeC
Confidence            499999999999


Done!