BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041209
(412 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A
MUTANT
Length = 554
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/384 (62%), Positives = 267/384 (69%), Gaps = 69/384 (17%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNKKVQDXXXXXXXXXXXGIETAG-- 198
LQDFFNGKEL KSINPDE ILSG+ ++ VQD GIETAG
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGV 409
Query: 199 -----------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPR 235
DN+P VLIQVYEGERA TKDNNLLGKFEL GIPPAPR
Sbjct: 410 MTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPR 469
Query: 236 GVPQINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAED 291
GVPQI V FDIDANGIL+VSA DK+ G ITITNDKGRLSKE+IERMVQEAEKYKAED
Sbjct: 470 GVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAED 529
Query: 292 EEIKKKVEAKNSLENYAYNMSNTV 315
E+ + KV +KNSLE+YA+NM TV
Sbjct: 530 EKQRDKVSSKNSLESYAFNMKATV 553
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 554
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/384 (62%), Positives = 267/384 (69%), Gaps = 69/384 (17%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNKKVQDXXXXXXXXXXXGIETAG-- 198
LQDFFNGKEL KSINPDE ILSG+ ++ VQD GIETAG
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGV 409
Query: 199 -----------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPR 235
DN+P VLIQVYEGERA TKDNNLLGKFEL GIPPAPR
Sbjct: 410 MTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPR 469
Query: 236 GVPQINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAED 291
GVPQI V FDIDANGIL+VSA DK+ G ITITNDKGRLSKE+IERMVQEAEKYKAED
Sbjct: 470 GVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAED 529
Query: 292 EEIKKKVEAKNSLENYAYNMSNTV 315
E+ + KV +KNSLE+YA+NM TV
Sbjct: 530 EKQRDKVSSKNSLESYAFNMKATV 553
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
Length = 543
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/374 (62%), Positives = 259/374 (69%), Gaps = 69/374 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRTV------------------------KATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R V K+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVRAERNVLIFDLGGGTFDVSILTTEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNKKVQDXXXXXXXXXXXGIETAG-- 198
LQDFFNGKEL KSINPDE ILSG+ ++ VQD GIETAG
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGV 409
Query: 199 -----------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPR 235
DN+P VLIQVYEGERA TKDNNLLGKFEL GIPPAPR
Sbjct: 410 MTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPR 469
Query: 236 GVPQINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAED 291
GVPQI V FDIDANGIL+VSA DK+ G ITITNDKGRLSKE+IERMVQEAEKYKAED
Sbjct: 470 GVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAED 529
Query: 292 EEIKKKVEAKNSLE 305
E+ + KV +KNSLE
Sbjct: 530 EKQRDKVSSKNSLE 543
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/221 (61%), Positives = 156/221 (70%), Gaps = 40/221 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNKKVQD 181
LQDFFNGKEL KSINPDE ILSG+ ++ VQD
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQD 390
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/219 (62%), Positives = 154/219 (70%), Gaps = 40/219 (18%)
Query: 3 IINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLGGE 36
IINEPTAAAIAYGLD K A R VK+TAGDTHLGGE
Sbjct: 172 IINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGE 231
Query: 37 DFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYEGI 82
DFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYEGI
Sbjct: 232 DFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGI 291
Query: 83 DFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQ 142
DFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+LLQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 143 DFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNKKVQD 181
DFFNGKEL KSINPDE ILSG+ ++ VQD
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQD 390
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFSVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFSLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFNVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
1nge 3
Length = 386
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFKVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 258 bits (659), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGEFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 258 bits (659), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGVFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In The
Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A
70k Heat-Shock Cognate Protein
Length = 386
Score = 258 bits (658), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 257 bits (657), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 133/214 (62%), Positives = 151/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIIN+PTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINQPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/214 (62%), Positives = 150/214 (70%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIIN PTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINSPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE ILSG+
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant
Length = 381
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 149/212 (70%), Gaps = 40/212 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
LQDFFNGKEL KSINPDE ILS
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 149/212 (70%), Gaps = 40/212 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 175 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 234
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 235 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 294
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 295 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 354
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
LQDFFNGKEL KSINPDE ILS
Sbjct: 355 LQDFFNGKELNKSINPDEAVAYGAAVQAAILS 386
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant
Length = 381
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 149/212 (70%), Gaps = 40/212 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
LQDFFNGKEL KSINPDE ILS
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant
Length = 381
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 149/212 (70%), Gaps = 40/212 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
LQDFFNGKEL KSINPDE ILS
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 255 bits (651), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 149/212 (70%), Gaps = 40/212 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
LQDFFNGKEL KSINPDE ILS
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 255 bits (651), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 149/212 (70%), Gaps = 40/212 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 189 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 248
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 249 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 308
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 309 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 368
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
LQDFFNGKEL KSINPDE ILS
Sbjct: 369 LQDFFNGKELNKSINPDEAVAYGAAVQAAILS 400
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 255 bits (651), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 149/212 (70%), Gaps = 40/212 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K A R VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
LQDFFNGKEL KSINPDE ILS
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 251 bits (642), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/212 (61%), Positives = 147/212 (69%), Gaps = 40/212 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIIN PTAAAIAYGLD A R VK+TAGDTHLG
Sbjct: 167 LRIINSPTAAAIAYGLDKAVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 226
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 227 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 286
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 287 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 346
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
LQDFFNGKEL KSINPDE ILS
Sbjct: 347 LQDFFNGKELNKSINPDEAVAYGAAVQAAILS 378
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 146/212 (68%), Gaps = 40/212 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD A R VK+TAGDTHLG
Sbjct: 167 LRIINEPTAAAIAYGLDKAVGAERNVLIFSLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 226
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKR H KDIS N RA+RRL+T +IEIDSLYE
Sbjct: 227 GEDFDNRMVNHFIAEFKRAHAKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 286
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 287 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 346
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
LQDFFNGKEL KSINPDE ILS
Sbjct: 347 LQDFFNGKELNKSINPDEAVAYGAAVQAAILS 378
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 403
Score = 249 bits (637), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 147/214 (68%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNKAS--------------------------RTVKATAGDTHLG 34
+RIINEPTAAAIAYGLD + + VKATAGDTHLG
Sbjct: 190 LRIINEPTAAAIAYGLDRRGAGERNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLG 249
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSLYE 80
GEDFDNRLVNHF+ EF+RKH KD+SGN RALRRL+T T+EIDSL+E
Sbjct: 250 GEDFDNRLVNHFMEEFRRKHGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSLFE 309
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
G+DFY +ITRARFEEL DLFR +EPVEK LRD+K+DK+Q+HDVVLVGGSTRIPKVQ+L
Sbjct: 310 GVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPKVQKL 369
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNGKEL KSINPDE +L G+
Sbjct: 370 LQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGD 403
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 145/212 (68%), Gaps = 40/212 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK--ASRT------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD A R VK+TAGDTHLG
Sbjct: 167 LRIINEPTAAAIAYGLDKAVGAERNVLIFDLGGGTFSVSILTIEDGIFEVKSTAGDTHLG 226
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKR H KDIS N RA+RRL T +IEIDSLYE
Sbjct: 227 GEDFDNRMVNHFIAEFKRAHAKDISENKRAVRRLATACERAKRTLSSSTQASIEIDSLYE 286
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 287 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 346
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
LQDFFNGKEL KSINPDE ILS
Sbjct: 347 LQDFFNGKELNKSINPDEAVAYGAAVQAAILS 378
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 247 bits (631), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/219 (59%), Positives = 150/219 (68%), Gaps = 40/219 (18%)
Query: 1 MRIINEPTAAAIAYGLD--NKASRTV------------------------KATAGDTHLG 34
+RIINEPTAAAIAYGLD K R V KATAGDTHLG
Sbjct: 173 LRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLG 232
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSLYE 80
GEDFDNRLVNHFV EFKRKHKKDIS N RA+RRL+T ++EIDSL+E
Sbjct: 233 GEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFE 292
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEEL DLFR +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+L
Sbjct: 293 GIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKL 352
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNKKV 179
LQDFFNG++L KSINPDE IL G+ ++ V
Sbjct: 353 LQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENV 391
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The
Apo Form
Length = 391
Score = 247 bits (631), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/219 (59%), Positives = 150/219 (68%), Gaps = 40/219 (18%)
Query: 1 MRIINEPTAAAIAYGLD--NKASRTV------------------------KATAGDTHLG 34
+RIINEPTAAAIAYGLD K R V KATAGDTHLG
Sbjct: 173 LRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLG 232
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSLYE 80
GEDFDNRLVNHFV EFKRKHKKDIS N RA+RRL+T ++EIDSL+E
Sbjct: 233 GEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFE 292
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEEL DLFR +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+L
Sbjct: 293 GIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKL 352
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNKKV 179
LQDFFNG++L KSINPDE IL G+ ++ V
Sbjct: 353 LQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENV 391
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound And
Mg Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg Ion-,
And K Ion- Bound State
Length = 392
Score = 247 bits (631), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/219 (59%), Positives = 150/219 (68%), Gaps = 40/219 (18%)
Query: 1 MRIINEPTAAAIAYGLD--NKASRTV------------------------KATAGDTHLG 34
+RIINEPTAAAIAYGLD K R V KATAGDTHLG
Sbjct: 174 LRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLG 233
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSLYE 80
GEDFDNRLVNHFV EFKRKHKKDIS N RA+RRL+T ++EIDSL+E
Sbjct: 234 GEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFE 293
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEEL DLFR +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+L
Sbjct: 294 GIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKL 353
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNKKV 179
LQDFFNG++L KSINPDE IL G+ ++ V
Sbjct: 354 LQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENV 392
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a
(Hsp70-1) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 409
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 147/214 (68%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLD--NKASRTV------------------------KATAGDTHLG 34
+RIINEPTAAAIAYGLD K R V KATAGDTHLG
Sbjct: 192 LRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLG 251
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSLYE 80
GEDFDNRLVNHFV EFKRKHKKDIS N RA+RRL+T ++EIDSL+E
Sbjct: 252 GEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFE 311
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEEL DLFR +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+L
Sbjct: 312 GIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKL 371
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQDFFNG++L KSINPDE IL G+
Sbjct: 372 LQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGD 405
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 146/213 (68%), Gaps = 40/213 (18%)
Query: 1 MRIINEPTAAAIAYGLD--NKASRTV------------------------KATAGDTHLG 34
+RIINEPTAAAIAYGLD K R V KATAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSLYE 80
GEDFDNRLVNHFV EFKRKHKKDIS N RA+RRL+T ++EIDSL+E
Sbjct: 230 GEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEEL DLFR +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+L
Sbjct: 290 GIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSG 173
LQDFFNG++L KSINPDE IL G
Sbjct: 350 LQDFFNGRDLNKSINPDEAVAYGAAVQAAILXG 382
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 146/213 (68%), Gaps = 40/213 (18%)
Query: 1 MRIINEPTAAAIAYGLD--NKASRTV------------------------KATAGDTHLG 34
+RIINEPTAAAIAYGLD K R V KATAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSLYE 80
GEDFDNRLVNHFV EFKRKHKKDIS N RA+RRL+T ++EIDSL+E
Sbjct: 230 GEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEEL DLFR +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+L
Sbjct: 290 GIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSG 173
LQDFFNG++L KSINPDE IL G
Sbjct: 350 LQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG 382
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 146/213 (68%), Gaps = 40/213 (18%)
Query: 1 MRIINEPTAAAIAYGLD--NKASRTV------------------------KATAGDTHLG 34
+RIINEPTAAAIAYGLD K R V KATAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSLYE 80
GEDFDNRLVNHFV EFKRKHKKDIS N RA+RRL+T ++EIDSL+E
Sbjct: 230 GEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEEL DLFR +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+L
Sbjct: 290 GIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKL 349
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSG 173
LQDFFNG++L KSINPDE IL G
Sbjct: 350 LQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG 382
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 146/213 (68%), Gaps = 40/213 (18%)
Query: 1 MRIINEPTAAAIAYGLD--NKASRTV------------------------KATAGDTHLG 34
+RIINEPTAAAIAYGLD K R V KATAGDTHLG
Sbjct: 168 LRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLG 227
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSLYE 80
GEDFDNRLVNHFV EFKRKHKKDIS N RA+RRL+T ++EIDSL+E
Sbjct: 228 GEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFE 287
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEEL DLFR +EPVEK LRD+K+DK+Q+HD+VLVGGSTRIPKVQ+L
Sbjct: 288 GIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKL 347
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSG 173
LQDFFNG++L KSINPDE IL G
Sbjct: 348 LQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG 380
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 241 bits (614), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 144/214 (67%), Gaps = 40/214 (18%)
Query: 1 MRIINEPTAAAIAYGLDNKAS--------------------------RTVKATAGDTHLG 34
+RIINEPTAAAIAYGLD VKATAGDTHLG
Sbjct: 194 LRIINEPTAAAIAYGLDKGGQGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLG 253
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSLYE 80
GEDFDNRLV+HFV EFKRKHKKDIS N RA+RRL+T +EIDSLYE
Sbjct: 254 GEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYE 313
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEEL DLFR +EPVEK LRD+K+DK+++HD+VLVGGSTRIPKVQ+L
Sbjct: 314 GIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRL 373
Query: 141 LQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
LQD+FNG++L KSINPDE IL G+
Sbjct: 374 LQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGD 407
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2
(Hsp70-2) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 404
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 142/216 (65%), Gaps = 42/216 (19%)
Query: 1 MRIINEPTAAAIAYGLDNKASRT----------------------------VKATAGDTH 32
+RIINEPTAAAIAYGLD K VK+TAGDTH
Sbjct: 189 LRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 248
Query: 33 LGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSL 78
LGGEDFDNR+V+H EFKRKHKKDI N RA+RRL+T +IEIDSL
Sbjct: 249 LGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSL 308
Query: 79 YEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQ 138
YEG+DFY +ITRARFEELN DLFR +EPVEK LRD+K+DK Q+ ++VLVGGSTRIPK+Q
Sbjct: 309 YEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQ 368
Query: 139 QLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
+LLQDFFNGKEL KSINPDE IL G+
Sbjct: 369 KLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGD 404
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2)
From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 141/216 (65%), Gaps = 42/216 (19%)
Query: 1 MRIINEPTAAAIAYGLDNKASRT----------------------------VKATAGDTH 32
+RIINEPTAAAIAYGLD K VK+TAGDTH
Sbjct: 171 LRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 230
Query: 33 LGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT--------------TIEIDSL 78
LGGEDFDNR V+H EFKRKHKKDI N RA+RRL+T +IEIDSL
Sbjct: 231 LGGEDFDNRXVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSL 290
Query: 79 YEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQ 138
YEG+DFY +ITRARFEELN DLFR +EPVEK LRD+K+DK Q+ ++VLVGGSTRIPK+Q
Sbjct: 291 YEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQ 350
Query: 139 QLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
+LLQDFFNGKEL KSINPDE IL G+
Sbjct: 351 KLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGD 386
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|D Chain D, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 191
Score = 224 bits (572), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/149 (73%), Positives = 124/149 (83%), Gaps = 14/149 (9%)
Query: 24 VKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTT------------ 71
VKATAGDTHLGGEDFDNRLVNHFV EFKRKHKKDIS N RA+RRL+T
Sbjct: 39 VKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSST 98
Query: 72 --TIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVG 129
++EIDSL+EGIDFY +ITRARFEEL DLFR +EPVEK LRD+K+DK+Q+HD+VLVG
Sbjct: 99 QASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVG 158
Query: 130 GSTRIPKVQQLLQDFFNGKELCKSINPDE 158
GSTRIPKVQ+LLQDFFNG++L KSINPDE
Sbjct: 159 GSTRIPKVQKLLQDFFNGRDLNKSINPDE 187
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 196/372 (52%), Gaps = 77/372 (20%)
Query: 2 RIINEPTAAAIAYGLDNKASRT------------------------VKATAGDTHLGGED 37
RIINEPTAAA+AYGLD + +T VKATAGD HLGG+D
Sbjct: 141 RIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDD 200
Query: 38 FDNRLVNHFVAEFKRKHKKDISGNARALRRLQ------------TTTIEIDSLYEG---- 81
FD ++++ V +FK++H D+S + AL+RL+ T +I +
Sbjct: 201 FDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANEN 260
Query: 82 --IDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQ 139
+ T+TRA+FEEL+ L + M PV + L+D+ + + + V+LVGGSTRIP VQ+
Sbjct: 261 GPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQE 320
Query: 140 LLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNKKVQDXXXXXXXXXXXGIETAG- 198
++ GKE K +NPDE +++GE V+D GIET G
Sbjct: 321 AIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPLSLGIETMGG 375
Query: 199 ------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAP 234
DN+ +V I V +GER DN LG+F+L GIPPAP
Sbjct: 376 VFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAP 435
Query: 235 RGVPQINVCFDIDANGILHVSAKD----KTAGITITNDKGRLSKEEIERMVQEAEKYKAE 290
RGVPQI V FDIDANGI+HV AKD K ITI + G LS+EEI+RM++EAE+
Sbjct: 436 RGVPQIEVTFDIDANGIVHVRAKDLGTNKEQSITIKSSSG-LSEEEIQRMIKEAEENAEA 494
Query: 291 DEEIKKKVEAKN 302
D + K+ E +N
Sbjct: 495 DRKRKEAAELRN 506
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 224 bits (570), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 154/411 (37%), Positives = 212/411 (51%), Gaps = 84/411 (20%)
Query: 2 RIINEPTAAAIAYGLD-NKASRTVK----------------------------ATAGDTH 32
RIINEPTAAA+AYGLD +RT+ AT GDTH
Sbjct: 167 RIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTH 226
Query: 33 LGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTTT----IEIDSLYEG------I 82
LGGEDFD+RL+N+ V EFK+ D+ + A++RL+ IE+ S + I
Sbjct: 227 LGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYI 286
Query: 83 DFYAT--------ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI 134
AT +TRA+ E L DL + +EP++ L+D+ + S + DV+LVGG TR+
Sbjct: 287 TADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRM 346
Query: 135 PKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNKKVQDXXXXXXXXXXXGI 194
P VQ+ + +FF GKE K +NPDE +L+G+ V+D GI
Sbjct: 347 PMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGI 401
Query: 195 ETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKG 229
ET G DN+ +V I V +GER R DN LG+F L G
Sbjct: 402 ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDG 461
Query: 230 IPPAPRGVPQINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAE 285
I PAPRG+PQI V FDIDA+GILHVSAKDK +G ITI G L+++EI++MV++AE
Sbjct: 462 INPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAE 520
Query: 286 KYKAEDEEIKKKVEAKNSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAI 336
D + + V+ +N ++ ++ V E+ KL DK IE A+
Sbjct: 521 ANAEADRKFDELVQTRNQGDHLLHSTRKQV--EEAGDKLPADDKTAIESAL 569
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|B Chain B, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|C Chain C, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|D Chain D, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
Length = 605
Score = 217 bits (553), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 153/411 (37%), Positives = 209/411 (50%), Gaps = 84/411 (20%)
Query: 2 RIINEPTAAAIAYGLD-NKASRTVK----------------------------ATAGDTH 32
RIINEPTAAA+AYGLD +RT+ AT GDTH
Sbjct: 167 RIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTH 226
Query: 33 LGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTTT----IEIDSLYEG------I 82
LGGEDFD+RL+N+ V EFK+ D+ + A +RL+ IE+ S + I
Sbjct: 227 LGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAXQRLKEAAEKAKIELSSAQQTDVNLPYI 286
Query: 83 DFYAT--------ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI 134
AT +TRA+ E L DL + +EP++ L+D+ + S + DV+LVGG TR
Sbjct: 287 TADATGPKHXNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRX 346
Query: 135 PKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNKKVQDXXXXXXXXXXXGI 194
P VQ+ + +FF GKE K +NPDE +L+G+ V+D GI
Sbjct: 347 PXVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGI 401
Query: 195 ETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKG 229
ET G DN+ +V I V +GER R DN LG+F L G
Sbjct: 402 ETXGGVXTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDG 461
Query: 230 IPPAPRGVPQINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAE 285
I PAPRG PQI V FDIDA+GILHVSAKDK +G ITI G L+++EI++ V++AE
Sbjct: 462 INPAPRGXPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKXVRDAE 520
Query: 286 KYKAEDEEIKKKVEAKNSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAI 336
D + ++ V+ +N ++ ++ V E+ KL DK IE A+
Sbjct: 521 ANAEADRKCEELVQTRNQGDHLLHSTRKQV--EEAGDKLPADDKTAIESAL 569
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3KVG|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3L4I|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L4I|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L6Q|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
pdb|3L6Q|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
Length = 400
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 137/215 (63%), Gaps = 41/215 (19%)
Query: 1 MRIINEPTAAAIAYGLDNKASRT--------------------------VKATAGDTHLG 34
MRIINEPTAAAIAYGLD K + VKATAGDTHLG
Sbjct: 186 MRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLG 245
Query: 35 GEDFDNRLVNHFVAEFKRKHK-KDISGNARALRRLQT--------------TTIEIDSLY 79
GEDFDNRLV V +FKRK++ D++ NARALRRL+T TIE+DSLY
Sbjct: 246 GEDFDNRLVEFCVQDFKRKNRGMDLTTNARALRRLRTQCERAKRTLSSSTQATIELDSLY 305
Query: 80 EGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQ 139
EGID+ I+RARFEEL D FR + PVEK L+D+ +DK VHDVVLVGGSTRIPKVQ
Sbjct: 306 EGIDYSVAISRARFEELCADYFRATLAPVEKVLKDAGMDKRSVHDVVLVGGSTRIPKVQA 365
Query: 140 LLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
L+Q+FFNGKE CK+INPDE IL+GE
Sbjct: 366 LIQEFFNGKEPCKAINPDEAVAYGAAVQAAILNGE 400
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 109/213 (51%), Positives = 137/213 (64%), Gaps = 41/213 (19%)
Query: 1 MRIINEPTAAAIAYGLDNKASR---------------------------TVKATAGDTHL 33
+RIINEPTAAAIAYGL S TVK+T+G+THL
Sbjct: 175 LRIINEPTAAAIAYGLGAGKSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHL 234
Query: 34 GGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLY 79
GG+DFD L+ HF AEFK+K DIS +ARALRRL+T TT+E+DSL+
Sbjct: 235 GGQDFDTNLLEHFKAEFKKKTGLDISDDARALRRLRTAAERAKRTLSSVTQTTVEVDSLF 294
Query: 80 EGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQ 139
+G DF +++TRARFE+LN LF+ +EPVE+ L+D+KI KSQ+ +VVLVGGSTRIPKVQ+
Sbjct: 295 DGEDFESSLTRARFEDLNAALFKSTLEPVEQVLKDAKISKSQIDEVVLVGGSTRIPKVQK 354
Query: 140 LLQDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
LL DFF+GK+L KSINPDE IL+
Sbjct: 355 LLSDFFDGKQLEKSINPDEAVAYGAAVQGAILT 387
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
pdb|3IUC|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
Length = 408
Score = 191 bits (484), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 129/213 (60%), Gaps = 39/213 (18%)
Query: 1 MRIINEPTAAAIAYGLDNKASRT-------------------------VKATAGDTHLGG 35
MRIINEPTAAAIAYGLD + V AT GDTHLGG
Sbjct: 194 MRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGG 253
Query: 36 EDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQ--------------TTTIEIDSLYEG 81
EDFD R++ HF+ +K+K KD+ + RA+++L+ IEI+S YEG
Sbjct: 254 EDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEG 313
Query: 82 IDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLL 141
DF T+TRA+FEELNMDLFR M+PV+K L DS + KS + ++VLVGGSTRIPK+QQL+
Sbjct: 314 EDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLV 373
Query: 142 QDFFNGKELCKSINPDEXXXXXXXXXXXILSGE 174
++FFNGKE + INPDE +LSG+
Sbjct: 374 KEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 406
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDL|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDN|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDN|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDO|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDO|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDP|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
pdb|3LDP|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
Length = 384
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 128/212 (60%), Gaps = 39/212 (18%)
Query: 1 MRIINEPTAAAIAYGLDNKASRT-------------------------VKATAGDTHLGG 35
MRIINEPTAAAIAYGLD + V AT GDTHLGG
Sbjct: 173 MRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGG 232
Query: 36 EDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQ--------------TTTIEIDSLYEG 81
EDFD R++ HF+ +K+K KD+ + RA+++L+ IEI+S YEG
Sbjct: 233 EDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEG 292
Query: 82 IDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLL 141
DF T+TRA+FEELNMDLFR M+PV+K L DS + KS + ++VLVGGSTRIPK+QQL+
Sbjct: 293 EDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLV 352
Query: 142 QDFFNGKELCKSINPDEXXXXXXXXXXXILSG 173
++FFNGKE + INPDE +LSG
Sbjct: 353 KEFFNGKEPSRGINPDEAVAYGAAVQAGVLSG 384
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN
pdb|3QML|A Chain A, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
pdb|3QML|B Chain B, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
Length = 390
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 128/211 (60%), Gaps = 39/211 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK-------------------------ASRTVKATAGDTHLGG 35
+RI+NEPTAAAIAYGLD V+AT+GDTHLGG
Sbjct: 180 LRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGG 239
Query: 36 EDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQ--------------TTTIEIDSLYEG 81
EDFD ++V + FK+KH D+S N +AL +L+ +T IEIDS +G
Sbjct: 240 EDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDG 299
Query: 82 IDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLL 141
ID T+TRA+FEELN+DLF+K ++PVEK L+DS ++K V D+VLVGGSTRIPKVQQLL
Sbjct: 300 IDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLL 359
Query: 142 QDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
+ +F+GK+ K INPDE +LS
Sbjct: 360 ESYFDGKKASKGINPDEAVAYGAAVQAGVLS 390
>pdb|3QFU|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXED WITH
ADP
Length = 394
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 128/211 (60%), Gaps = 39/211 (18%)
Query: 1 MRIINEPTAAAIAYGLDNK-------------------------ASRTVKATAGDTHLGG 35
+RI+NEPTAAAIAYGLD V+AT+GDTHLGG
Sbjct: 184 LRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGG 243
Query: 36 EDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQ--------------TTTIEIDSLYEG 81
EDFD ++V + FK+KH D+S N +AL +L+ +T IEIDS +G
Sbjct: 244 EDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDG 303
Query: 82 IDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLL 141
ID T+TRA+FEELN+DLF+K ++PVEK L+DS ++K V D+VLVGGSTRIPKVQQLL
Sbjct: 304 IDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLL 363
Query: 142 QDFFNGKELCKSINPDEXXXXXXXXXXXILS 172
+ +F+GK+ K INPDE +LS
Sbjct: 364 ESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394
>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
pdb|7HSC|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
Length = 159
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/114 (79%), Positives = 98/114 (85%), Gaps = 4/114 (3%)
Query: 196 TAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255
T DN+P VLIQVYEGERA TKDNNLLGKFEL GIPPAPRGVPQI V FDIDANGIL+VS
Sbjct: 46 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVS 105
Query: 256 AKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLE 305
A DK+ G ITITNDKGRLSKE+IERMVQEAEKYKAEDE+ + KV +KNSLE
Sbjct: 106 AVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159
>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2
Protein From Saccharomyces Cerevisiae
Length = 152
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 95/114 (83%), Gaps = 4/114 (3%)
Query: 196 TAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255
TA DN+P+V+I+VYEGERA +KDNNLLGKFEL GIPPAPRGVPQI V F +DANGIL VS
Sbjct: 39 TAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVPQIEVTFALDANGILKVS 98
Query: 256 AKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLE 305
A DK G ITITNDKGRL++EEI+RMV+EAEK+ +ED IK KVE++N LE
Sbjct: 99 ATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152
>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein
F44e5.5 From C.Elegans.
pdb|3DOB|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein
F44e5.5 From C.Elegans
Length = 152
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 92/114 (80%), Gaps = 4/114 (3%)
Query: 196 TAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255
T DN+P V IQVYEGERA T+DN+ LG FEL GIPPAPRGVPQI V F+IDANGIL+VS
Sbjct: 39 TYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVS 98
Query: 256 AKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLE 305
A+DK+ G ITI N+KGRL++ +I+RMV EA++++ ED E +++V+A+N LE
Sbjct: 99 AEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D
Precursor From C.Elegans
Length = 152
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 86/114 (75%), Gaps = 4/114 (3%)
Query: 196 TAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255
TA D++ +V I +YEGER DN+ LG F++ GIPPAPRGVPQI V F+ID NGILHVS
Sbjct: 39 TAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVS 98
Query: 256 AKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLE 305
A+DK G +TITND RLS E+IERM+ +A+K+ A+D+ K+KVE++N LE
Sbjct: 99 AEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152
>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda
Prote (Mortalin)
pdb|3N8E|B Chain B, Substrate Binding Domain Of The Human Heat Shock 70kda
Prote (Mortalin)
Length = 182
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Query: 196 TAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255
TA D + V I+V +GER DN LLG+F L GIPPAPRGVPQI V FDIDANGI+HVS
Sbjct: 59 TAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVS 118
Query: 256 AKDKTAG---ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYN 310
AKDK G + G LSK++IE MV+ AEKY ED K++VEA N E ++
Sbjct: 119 AKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHD 176
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe
Bound To The Atpase Domain Of The Molecular Chaperone
Dnak
Length = 383
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 109/204 (53%), Gaps = 48/204 (23%)
Query: 2 RIINEPTAAAIAYGLD-NKASRTVK----------------------------ATAGDTH 32
RIINEPTAAA+AYGLD +RT+ AT GDTH
Sbjct: 167 RIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTH 226
Query: 33 LGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTTT----IEIDSLYEG------I 82
LGGEDFD+RL+N+ V EFK+ D+ + A++RL+ IE+ S + I
Sbjct: 227 LGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYI 286
Query: 83 DFYAT--------ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI 134
AT +TRA+ E L DL + +E ++ L+D+ + S + DV+LVGG TR+
Sbjct: 287 TADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRM 346
Query: 135 PKVQQLLQDFFNGKELCKSINPDE 158
P VQ+ + +FF GKE K +NPDE
Sbjct: 347 PMVQKKVAEFF-GKEPRKDVNPDE 369
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPO|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPP|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPP|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPQ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|E Chain E, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|F Chain F, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3QNJ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|3QNJ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|4E81|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
pdb|4E81|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
Length = 219
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 92/145 (63%), Gaps = 7/145 (4%)
Query: 196 TAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255
TA DN+ +V I V +GER R DN LG+F L GI PAPRG+PQI V FDIDA+GILHVS
Sbjct: 40 TAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVS 99
Query: 256 AKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNM 311
AKDK +G ITI G L+++EI++MV++AE D + ++ V+ +N ++ ++
Sbjct: 100 AKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHST 158
Query: 312 SNTVRDEKFAGKLDPADKQKIEKAI 336
V E+ KL DK IE A+
Sbjct: 159 RKQV--EEAGDKLPADDKTAIESAL 181
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKY|B Chain B, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKZ|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1 Native
Crystals
Length = 219
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 92/145 (63%), Gaps = 7/145 (4%)
Query: 196 TAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255
TA DN+ +V I V +GER R DN LG+F L GI PAPRG+PQI V FDIDA+GILHVS
Sbjct: 40 TAEDNQSAVSIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVS 99
Query: 256 AKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNM 311
AKDK +G ITI G L+++EI++MV++AE D + ++ V+ +N ++ ++
Sbjct: 100 AKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHST 158
Query: 312 SNTVRDEKFAGKLDPADKQKIEKAI 336
V E+ KL DK IE A+
Sbjct: 159 RKQV--EEAGDKLPADDKTAIESAL 181
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1
Selenomethionyl Crystals
Length = 219
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 91/145 (62%), Gaps = 7/145 (4%)
Query: 196 TAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255
TA DN+ +V I V +GER R DN LG+F L GI PAPRG+PQI V FDIDA+GILHVS
Sbjct: 40 TAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVS 99
Query: 256 AKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNM 311
AKDK +G ITI G L+++EI++MV++AE D + + V+ +N ++ ++
Sbjct: 100 AKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHST 158
Query: 312 SNTVRDEKFAGKLDPADKQKIEKAI 336
V E+ KL DK IE A+
Sbjct: 159 RKQV--EEAGDKLPADDKTAIESAL 181
>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|C Chain C, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|D Chain D, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans
Length = 151
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Query: 196 TAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255
TA D + V I+V++GER N LLG+F L GIPPAPRGVPQ+ V FDIDANGI++VS
Sbjct: 39 TAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVS 98
Query: 256 AKDKTAG---ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLE 305
A+D+ G + G LSK++IE M++EAEK AED + K+ VE N E
Sbjct: 99 ARDRGTGKEQQIVIQSSGGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak,
Minimized Average Structure
pdb|2BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, 25
Structures
Length = 191
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 88/137 (64%), Gaps = 8/137 (5%)
Query: 196 TAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255
TA DN+ +V I V +GER R DN LG+F L GI PAPRG+PQI V FDIDA+GILHVS
Sbjct: 58 TAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVS 117
Query: 256 AKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNM 311
AKDK +G ITI G L+++EI++MV++AE D + ++ V+ +N ++ ++
Sbjct: 118 AKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHST 176
Query: 312 SNTVRDEKFAGKLDPAD 328
V + AG PAD
Sbjct: 177 RKQVEE---AGDKLPAD 190
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 675
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 181/440 (41%), Gaps = 111/440 (25%)
Query: 1 MRIINEPTAAAIAYGLDN-------------------------------KASRTVKATAG 29
+RI+N+ TAA ++YG+ K V TA
Sbjct: 169 VRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTAC 228
Query: 30 DTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTTT--------------IEI 75
D H GG DFD + HF EFK K+K DI N +A R+ T +
Sbjct: 229 DKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSV 288
Query: 76 DSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIP 135
+S+ +D + ++R EEL L + EPV K L +K+ +V V ++GG+TRIP
Sbjct: 289 ESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIP 348
Query: 136 KVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXI-------------------LSGEGN 176
++Q + + F GK L ++N DE I +S +
Sbjct: 349 TLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYSVSYSWD 407
Query: 177 KKVQDXXXXXXXXXXXGIETAGDNRPSV-LIQVYEGERARTKDNNLLGKF-ELKGIPP-- 232
K+V+D + AG + PS LI + RT D ++ + ++ +PP
Sbjct: 408 KQVEDEDHME-------VFPAGSSFPSTKLITL-----NRTGDFSMAASYTDITQLPPNT 455
Query: 233 -------------APRGVPQINVCFDI--DANGILHV----SAKDKTAG----------I 263
P G + V + D +G+ + + +D AG +
Sbjct: 456 PEQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDL 515
Query: 264 TITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNMSNTVRDEKFAGK 323
TI L +++ ++++ + A+D+ + + + KN+LE Y Y + + +E++A
Sbjct: 516 TIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKL-EEEYAPF 574
Query: 324 LDPADKQKIEKAIDEAIEWL 343
A+K K++ +++A EWL
Sbjct: 575 ASDAEKTKLQGMLNKAEEWL 594
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 675
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 181/436 (41%), Gaps = 103/436 (23%)
Query: 1 MRIINEPTAAAIAYGLDN-------------------------------KASRTVKATAG 29
+RI+N+ TAA ++YG+ K V TA
Sbjct: 169 VRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIXAFKKGQLKVLGTAC 228
Query: 30 DTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTTT--------------IEI 75
D H GG DFD + HF EFK K+K DI N +A R+ T +
Sbjct: 229 DKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSV 288
Query: 76 DSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIP 135
+S+ +D + ++R EEL L + EPV K L +K+ +V V ++GG+TRIP
Sbjct: 289 ESVXNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIP 348
Query: 136 KVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXI-------------------LSGEGN 176
++Q + + F GK L ++N DE I +S +
Sbjct: 349 TLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYSVSYSWD 407
Query: 177 KKVQDXXXXXXXXXXXGIETAGDNRPSV-LIQV-----YEGERARTKDNNL-------LG 223
K+V+D + AG + PS LI + + + T L +
Sbjct: 408 KQVEDEDHXE-------VFPAGSSFPSTKLITLNRTGDFSXAASYTDITQLPPNTPEQIA 460
Query: 224 KFELKGI--PPAPRGVPQINVCFDIDANGILHV----SAKDKTAG----------ITITN 267
+E+ G+ P VP + + D +G+ + + +D AG +TI
Sbjct: 461 NWEITGVQLPEGQDSVP-VKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVA 519
Query: 268 DKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNMSNTVRDEKFAGKLDPA 327
L +++ ++++ + A+D+ + + + KN+LE Y Y + + +E++A A
Sbjct: 520 HTFGLDAKKLNELIEKENEXLAQDKLVAETEDRKNTLEEYIYTLRGKL-EEEYAPFASDA 578
Query: 328 DKQKIEKAIDEAIEWL 343
+K K++ +++A EWL
Sbjct: 579 EKTKLQGXLNKAEEWL 594
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 668
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 46/203 (22%)
Query: 1 MRIINEPTAAAIAYGLDN-------------------------------KASRTVKATAG 29
+RI+N+ TAA ++YG+ K V TA
Sbjct: 171 VRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTAC 230
Query: 30 DTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTTT--------------IEI 75
D H GG DFD + HF EFK K+K DI N +A R+ T +
Sbjct: 231 DKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSV 290
Query: 76 DSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIP 135
+S+ +D + ++R EEL L + EPV K L +K+ +V V ++GG+TRIP
Sbjct: 291 ESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIP 350
Query: 136 KVQQLLQDFFNGKELCKSINPDE 158
++Q + + F GK L ++N DE
Sbjct: 351 TLKQSISEAF-GKPLSTTLNQDE 372
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 263 ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNMSNTVRDEKFAG 322
+TI L +++ ++++ + A+D+ + + + KN+LE Y Y + + +E++A
Sbjct: 535 LTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKL-EEEYAP 593
Query: 323 KLDPADKQKIEKAIDEAIEWL 343
A+K K++ +++A EWL
Sbjct: 594 FASDAEKTKLQGMLNKAEEWL 614
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
pdb|2QXL|B Chain B, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
Length = 658
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 46/203 (22%)
Query: 1 MRIINEPTAAAIAYGLDN-------------------------------KASRTVKATAG 29
+RI+N+ TAA ++YG+ K V TA
Sbjct: 168 VRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTAC 227
Query: 30 DTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQTTT--------------IEI 75
D H GG DFD + HF EFK K+K DI N +A R+ T +
Sbjct: 228 DKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSV 287
Query: 76 DSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIP 135
+S+ +D + ++R EEL L + EPV K L +K+ +V V ++GG+TRIP
Sbjct: 288 ESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIP 347
Query: 136 KVQQLLQDFFNGKELCKSINPDE 158
++Q + + F GK L ++N DE
Sbjct: 348 TLKQSISEAF-GKPLSTTLNQDE 369
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 263 ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNMSNTVRDEKFAG 322
+TI L +++ ++++ + A+D+ + + + KN+LE Y Y + + +E++A
Sbjct: 532 LTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKL-EEEYAP 590
Query: 323 KLDPADKQKIEKAIDEAIEWL 343
A+K K++ +++A EWL
Sbjct: 591 FASDAEKTKLQGMLNKAEEWL 611
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In
The Apo Form
Length = 115
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Query: 195 ETAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHV 254
TA DN+ +V I V +GER R DN LG+F L GI PAPRG+PQI V FDIDA+GILHV
Sbjct: 35 STAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHV 94
Query: 255 SAKDKTAG----ITITNDKG 270
SAKDK +G ITI G
Sbjct: 95 SAKDKNSGKEQKITIKASSG 114
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak
Bound To The Peptide Nrllltg
Length = 135
Score = 91.3 bits (225), Expect = 8e-19, Method: Composition-based stats.
Identities = 48/79 (60%), Positives = 55/79 (69%), Gaps = 4/79 (5%)
Query: 196 TAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255
TA DN+ +V I V +GER R DN LG+F L GI PAPRG+PQI V FDIDA+GILHVS
Sbjct: 56 TAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVS 115
Query: 256 AKDKTAG----ITITNDKG 270
AKDK +G ITI G
Sbjct: 116 AKDKNSGKEQKITIKASSG 134
>pdb|2P32|A Chain A, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|B Chain B, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|C Chain C, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|D Chain D, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|E Chain E, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|F Chain F, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
Length = 120
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 304 LENYAYNMSNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXG 363
LE+YA+N+ T+ DEK K+ P DK+KIE DE ++WLD NQ G
Sbjct: 23 LESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEG 82
Query: 364 FCNPIIAKMYEG 375
NPII+K+Y+
Sbjct: 83 LANPIISKLYQS 94
>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu
Recognition Peptide Elppvkihc
Length = 227
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 199 DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVSAKD 258
D + ++ I V +GER +D L +F L+GIP P G I V F +DA+G+L V+A +
Sbjct: 40 DGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAME 99
Query: 259 KTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIK----KKVEAKNSLENY 307
K+ G I + G L+ EI M++++ Y +D + + +KVEA LE+
Sbjct: 100 KSTGVEASIQVKPSYG-LTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESL 155
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
pdb|4GNI|B Chain B, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
Length = 409
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 45/201 (22%)
Query: 1 MRIINEPTAAAIAY------GLDNK-----------------ASR----TVKATAGDTHL 33
+++I+EP AA +AY + +K ASR T+ AT D
Sbjct: 181 LQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEY 240
Query: 34 GGEDFDNRLVNHFVAEFKRKH--KKDISGNARALRRLQ--------------TTTIEIDS 77
G D L++HF EF +K+ KD N R+L +L+ + ++S
Sbjct: 241 HGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVES 300
Query: 78 LYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKV 137
L +G+DF +TI R R+E + +F VE ++ + +D V +V++ GG++ P++
Sbjct: 301 LIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRI 360
Query: 138 QQLLQDFF--NGKELCKSINP 156
+ F + + L S +P
Sbjct: 361 AANFRYIFPESTRILAPSTDP 381
>pdb|1UD0|A Chain A, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|B Chain B, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|C Chain C, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|D Chain D, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
Length = 113
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%)
Query: 302 NSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXX 361
+ LE+YA+N TV DEK GK++ DKQKI +E I WLD NQ
Sbjct: 7 HXLESYAFNXKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKEL 66
Query: 362 XGFCNPIIAKMYE 374
CNPII K+Y+
Sbjct: 67 EKVCNPIITKLYQ 79
>pdb|3LOF|A Chain A, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|B Chain B, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|C Chain C, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|D Chain D, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|E Chain E, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|F Chain F, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b
Length = 113
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%)
Query: 297 KVEAKNSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXX 356
+V AKN+LE+YA+N + V DE GK+ ADK+K+ E I WLD N
Sbjct: 7 RVSAKNALESYAFNXKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEH 66
Query: 357 XXXXXXGFCNPIIAKMY 373
CNPII+ +Y
Sbjct: 67 KRKELEQVCNPIISGLY 83
>pdb|2LMG|A Chain A, Solution Structure Of The C-Terminal Domain (537-610) Of
Human Heat Shock Protein 70
Length = 75
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%)
Query: 300 AKNSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXX 359
AKN+LE+YA+NM + V DE GK+ ADK+K+ E I WLD N
Sbjct: 3 AKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRK 62
Query: 360 XXXGFCNPIIAKM 372
CNPII+ +
Sbjct: 63 ELEQVCNPIISGL 75
>pdb|1IEB|B Chain B, Histocompatibility Antigen
pdb|1IEB|D Chain D, Histocompatibility Antigen
Length = 227
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 37 DFDNRLVNHFVAEFKRK 53
D +R+VNHF+AEFKRK
Sbjct: 2 DSRDRMVNHFIAEFKRK 18
>pdb|4DUT|A Chain A, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis
pdb|4DUT|B Chain B, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis
pdb|4EK2|A Chain A, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis Bound To Deoxyadenosine
Monophosphate
pdb|4EK2|B Chain B, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis Bound To Deoxyadenosine
Monophosphate
pdb|4HR2|A Chain A, Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis Bound To Adp
pdb|4HR2|B Chain B, Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis Bound To Adp
Length = 145
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 204 VLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVSAKDKTAGI 263
V+IQV EGE A K+ +L+G + K A +G + + IDAN + H S +TA +
Sbjct: 76 VMIQVLEGEDAILKNRDLMGATDPKK---AEKGTIRADFADSIDANAV-HGSDAPETARV 131
Query: 264 TIT 266
I
Sbjct: 132 EIA 134
>pdb|1NY5|A Chain A, Crystal Structure Of Sigm54 Activator (Aaa+ Atpase) In The
Inactive State
pdb|1NY5|B Chain B, Crystal Structure Of Sigm54 Activator (Aaa+ Atpase) In The
Inactive State
Length = 387
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 42 LVNHFVAEFKRKHKKDISGNARALRRL 68
L NHF+ +F RK+ K++ G ++ + L
Sbjct: 320 LANHFLKKFSRKYAKEVEGFTKSAQEL 346
>pdb|1NY6|A Chain A, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|B Chain B, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|C Chain C, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|D Chain D, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|E Chain E, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|F Chain F, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|G Chain G, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|H Chain H, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|I Chain I, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|J Chain J, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|K Chain K, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|L Chain L, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|M Chain M, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|N Chain N, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
Length = 267
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 42 LVNHFVAEFKRKHKKDISGNARALRRLQTT 71
L NHF+ +F RK+ K++ G ++ + L +
Sbjct: 200 LANHFLKKFSRKYAKEVEGFTKSAQELLLS 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,589,663
Number of Sequences: 62578
Number of extensions: 407570
Number of successful extensions: 1411
Number of sequences better than 100.0: 105
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1151
Number of HSP's gapped (non-prelim): 171
length of query: 412
length of database: 14,973,337
effective HSP length: 101
effective length of query: 311
effective length of database: 8,652,959
effective search space: 2691070249
effective search space used: 2691070249
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 53 (25.0 bits)