Query 041209
Match_columns 412
No_of_seqs 266 out of 2183
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 07:45:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041209.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041209hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 4.3E-61 1.5E-65 504.5 43.7 363 1-374 166-604 (605)
2 3d2f_A Heat shock protein homo 100.0 6.9E-60 2.4E-64 499.3 39.9 372 1-376 169-628 (675)
3 2kho_A Heat shock protein 70; 100.0 4E-60 1.4E-64 497.1 33.1 363 1-374 166-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 1.9E-53 6.5E-58 442.4 25.4 316 1-316 170-554 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 4.4E-49 1.5E-53 406.1 26.5 299 1-305 140-509 (509)
6 4e81_A Chaperone protein DNAK; 100.0 5.1E-33 1.7E-37 254.0 22.1 187 182-374 1-216 (219)
7 1u00_A HSC66, chaperone protei 100.0 2.2E-30 7.6E-35 238.5 23.3 186 185-376 1-215 (227)
8 3i33_A Heat shock-related 70 k 100.0 2.2E-27 7.5E-32 237.4 19.5 173 1-173 189-403 (404)
9 4gni_A Putative heat shock pro 99.9 5.3E-27 1.8E-31 235.1 19.1 172 1-172 181-402 (409)
10 3qfu_A 78 kDa glucose-regulate 99.9 7.7E-27 2.6E-31 232.4 19.8 172 1-172 184-394 (394)
11 3n8e_A Stress-70 protein, mito 99.9 6.6E-26 2.3E-30 200.4 15.5 136 180-316 18-182 (182)
12 1dkg_D Molecular chaperone DNA 99.9 2.3E-25 7.8E-30 221.2 17.6 171 1-172 166-383 (383)
13 3h0x_A 78 kDa glucose-regulate 99.9 2.3E-23 7.7E-28 179.5 12.3 122 184-305 2-152 (152)
14 3dob_A Heat shock 70 kDa prote 99.9 1.5E-23 5E-28 180.4 9.6 122 184-305 2-152 (152)
15 3dqg_A Heat shock 70 kDa prote 99.9 3E-23 1E-27 178.3 6.5 121 184-305 2-151 (151)
16 2op6_A Heat shock 70 kDa prote 99.9 1.6E-21 5.6E-26 168.4 10.3 122 184-305 2-152 (152)
17 1jce_A ROD shape-determining p 99.8 2.7E-20 9.1E-25 182.0 11.1 164 1-172 126-327 (344)
18 3lof_A Heat shock 70 kDa prote 99.7 1E-17 3.5E-22 137.1 10.6 111 293-412 3-113 (113)
19 1ud0_A HSC70, 70 kDa heat-shoc 99.7 3.4E-17 1.2E-21 134.1 5.8 112 297-412 2-113 (113)
20 1q5l_A Chaperone protein DNAK; 99.6 1.1E-15 3.8E-20 128.7 10.4 90 179-268 14-132 (135)
21 2p32_A Heat shock 70 kDa prote 99.6 1.2E-15 4E-20 126.1 6.5 108 294-412 13-120 (120)
22 4a2a_A Cell division protein F 99.5 2.7E-14 9.2E-19 142.9 7.6 160 2-171 186-394 (419)
23 3h1q_A Ethanolamine utilizatio 99.4 5.3E-13 1.8E-17 125.6 10.6 134 2-168 124-272 (272)
24 2fsj_A Hypothetical protein TA 99.4 3E-13 1E-17 132.1 9.0 150 1-169 166-343 (346)
25 2ych_A Competence protein PILM 99.4 5.9E-13 2E-17 131.3 6.6 143 2-159 169-342 (377)
26 2zgy_A Plasmid segregation pro 99.3 2.2E-12 7.6E-17 124.6 6.8 152 1-168 143-319 (320)
27 4ehu_A Activator of 2-hydroxyi 99.2 2.2E-12 7.4E-17 121.9 3.9 158 1-172 74-256 (276)
28 2fxu_A Alpha-actin-1, actin, a 99.2 1.5E-11 5.3E-16 121.3 5.7 163 1-169 132-348 (375)
29 1k8k_A ARP3, actin-like protei 99.2 1.4E-11 4.7E-16 123.3 4.8 167 1-170 139-387 (418)
30 3js6_A Uncharacterized PARM pr 98.7 9.6E-09 3.3E-13 100.4 5.3 151 1-172 157-338 (355)
31 1k8k_B ARP2, actin-like protei 98.5 5.2E-08 1.8E-12 96.6 4.7 164 1-170 136-364 (394)
32 4apw_A ALP12; actin-like prote 98.4 6.9E-08 2.3E-12 93.3 1.5 155 1-172 152-326 (329)
33 3dwl_A Actin-related protein 3 97.1 0.00047 1.6E-08 68.7 5.9 168 2-169 156-395 (427)
34 1hux_A Activator of (R)-2-hydr 97.1 0.0014 4.7E-08 61.2 8.4 73 95-172 186-258 (270)
35 2d0o_A DIOL dehydratase-reacti 96.9 0.00067 2.3E-08 68.2 4.8 81 87-169 507-603 (610)
36 3l0q_A Xylulose kinase; xlylul 96.9 0.0022 7.5E-08 66.1 8.8 82 87-173 408-492 (554)
37 4bc3_A Xylulose kinase; transf 96.8 0.0033 1.1E-07 64.5 8.9 76 95-172 408-483 (538)
38 2itm_A Xylulose kinase, xylulo 96.7 0.0033 1.1E-07 63.6 8.1 80 89-173 357-437 (484)
39 3ll3_A Gluconate kinase; xylul 96.7 0.0038 1.3E-07 63.5 8.4 79 89-173 364-443 (504)
40 1nbw_A Glycerol dehydratase re 96.7 0.00096 3.3E-08 67.3 3.8 80 87-168 509-604 (607)
41 2zf5_O Glycerol kinase; hypert 96.7 0.0038 1.3E-07 63.3 8.4 79 89-173 365-443 (497)
42 3i8b_A Xylulose kinase; strain 96.6 0.0035 1.2E-07 63.9 7.6 79 89-173 395-474 (515)
43 3ezw_A Glycerol kinase; glycer 96.6 0.0063 2.1E-07 62.2 9.4 81 88-173 371-452 (526)
44 3hz6_A Xylulokinase; xylulose, 96.6 0.0045 1.5E-07 63.1 8.1 50 122-173 403-453 (511)
45 3jvp_A Ribulokinase; PSI-II, N 96.4 0.0052 1.8E-07 63.5 7.8 79 89-173 410-490 (572)
46 3g25_A Glycerol kinase; IDP007 96.4 0.0053 1.8E-07 62.3 7.4 80 89-173 374-454 (501)
47 4e1j_A Glycerol kinase; struct 96.3 0.0044 1.5E-07 63.3 6.3 51 121-173 425-475 (520)
48 2dpn_A Glycerol kinase; thermu 96.3 0.0092 3.2E-07 60.4 8.5 80 89-173 368-448 (495)
49 3h3n_X Glycerol kinase; ATP-bi 96.2 0.0063 2.1E-07 61.9 7.0 80 89-173 373-453 (506)
50 2p3r_A Glycerol kinase; glycer 96.2 0.0058 2E-07 62.2 6.7 80 89-173 371-451 (510)
51 3ifr_A Carbohydrate kinase, FG 96.2 0.0059 2E-07 62.1 6.4 79 89-173 371-450 (508)
52 2d4w_A Glycerol kinase; alpha 96.1 0.016 5.5E-07 58.8 9.1 80 89-173 373-453 (504)
53 2w40_A Glycerol kinase, putati 95.8 0.021 7.2E-07 57.9 8.6 80 89-173 376-457 (503)
54 2ews_A Pantothenate kinase; PA 95.8 0.021 7.2E-07 53.5 7.7 76 88-168 207-286 (287)
55 2uyt_A Rhamnulokinase; rhamnos 95.4 0.023 7.9E-07 57.3 6.9 80 87-172 361-441 (489)
56 3qb0_A Actin-related protein 4 94.6 0.14 4.9E-06 51.6 10.2 64 106-169 396-470 (498)
57 4fo0_A Actin-related protein 8 94.2 0.17 5.8E-06 52.1 10.1 49 122-170 501-564 (593)
58 3h6e_A Carbohydrate kinase, FG 94.0 0.067 2.3E-06 53.9 6.1 72 94-171 362-436 (482)
59 2i7n_A Pantothenate kinase 1; 93.8 0.12 4.1E-06 49.8 7.2 47 122-168 306-358 (360)
60 2e2o_A Hexokinase; acetate and 83.6 2.3 7.9E-05 39.3 7.1 49 122-171 240-288 (299)
61 3qbx_A Anhydro-N-acetylmuramic 81.8 4.1 0.00014 39.1 8.1 74 96-172 261-338 (371)
62 2ivn_A O-sialoglycoprotein end 80.1 4.3 0.00015 38.3 7.7 51 122-172 245-300 (330)
63 3ttc_A HYPF, transcriptional r 79.9 5.9 0.0002 41.1 9.1 50 122-171 600-652 (657)
64 3eno_A Putative O-sialoglycopr 79.6 6.2 0.00021 37.4 8.6 68 101-173 234-306 (334)
65 3vth_A Hydrogenase maturation 78.8 3.3 0.00011 43.9 6.9 51 122-172 694-749 (761)
66 3cqy_A Anhydro-N-acetylmuramic 78.0 7.4 0.00025 37.4 8.5 73 95-171 267-343 (370)
67 4g9i_A Hydrogenase maturation 77.5 4.5 0.00015 42.9 7.5 61 106-171 695-760 (772)
68 3ven_A O-carbamoyltransferase 71.7 9.6 0.00033 38.9 8.0 64 106-174 297-361 (576)
69 2gup_A ROK family protein; sug 71.3 16 0.00056 33.2 9.0 49 122-170 228-287 (292)
70 3r8e_A Hypothetical sugar kina 64.8 20 0.00067 33.3 8.2 48 122-169 261-318 (321)
71 4htl_A Beta-glucoside kinase; 63.3 19 0.00065 33.0 7.7 50 122-171 238-292 (297)
72 1hnj_A Beta-ketoacyl-acyl carr 62.4 9.1 0.00031 35.5 5.3 45 99-146 215-259 (317)
73 2aa4_A Mannac kinase, putative 60.3 16 0.00053 33.3 6.5 47 122-168 234-286 (289)
74 2qm1_A Glucokinase; alpha-beta 59.5 25 0.00086 32.4 7.9 49 122-170 263-321 (326)
75 1zc6_A Probable N-acetylglucos 59.3 5 0.00017 37.2 2.8 63 97-169 228-292 (305)
76 4db3_A Glcnac kinase, N-acetyl 57.9 22 0.00076 33.1 7.2 47 122-168 270-324 (327)
77 3vgl_A Glucokinase; ROK family 57.2 28 0.00097 32.2 7.8 48 122-169 253-311 (321)
78 2ebd_A 3-oxoacyl-[acyl-carrier 56.6 12 0.00042 34.3 5.1 44 100-146 208-251 (309)
79 1ub7_A 3-oxoacyl-[acyl-carrier 56.0 12 0.00042 34.6 5.0 44 100-146 218-261 (322)
80 1saz_A Probable butyrate kinas 55.2 11 0.00038 36.2 4.6 48 121-168 295-346 (381)
81 3htv_A D-allose kinase, alloki 53.9 43 0.0015 30.9 8.4 49 122-170 240-299 (310)
82 3vov_A Glucokinase, hexokinase 51.9 32 0.0011 31.6 7.1 49 122-170 238-295 (302)
83 1mzj_A Beta-ketoacylsynthase I 51.2 12 0.00042 35.0 4.2 43 100-145 229-271 (339)
84 2pk2_A Cyclin-T1, protein TAT; 50.9 3.2 0.00011 39.8 0.0 18 156-173 79-96 (358)
85 1zbs_A Hypothetical protein PG 50.0 7 0.00024 35.9 2.2 69 96-171 211-281 (291)
86 2hoe_A N-acetylglucosamine kin 49.4 54 0.0019 31.1 8.6 48 122-169 315-370 (380)
87 1zow_A 3-oxoacyl-[acyl-carrier 49.1 14 0.00049 34.0 4.2 44 99-145 209-252 (313)
88 2x3e_A 3-oxoacyl-[acyl-carrier 48.0 14 0.00049 34.4 4.1 43 100-145 222-264 (331)
89 2zqm_A Prefoldin beta subunit 47.5 93 0.0032 23.8 8.6 49 325-377 64-112 (117)
90 2gp6_A 3-oxoacyl-[acyl-carrier 43.0 25 0.00085 34.4 5.0 46 102-147 302-349 (434)
91 4fla_A Regulation of nuclear P 41.8 1E+02 0.0035 25.4 7.8 47 327-373 96-145 (152)
92 2ch5_A NAGK protein; transfera 41.8 31 0.001 32.2 5.3 48 124-172 268-326 (347)
93 1u6e_A 3-oxoacyl-[acyl-carrier 41.3 20 0.00067 33.4 3.9 43 100-145 230-272 (335)
94 2a01_A Apolipoprotein A-I; fou 41.0 12 0.00042 33.5 2.3 20 326-345 168-187 (243)
95 2ap1_A Putative regulator prot 40.7 16 0.00055 33.9 3.1 46 122-168 270-324 (327)
96 2q2r_A Glucokinase 1, putative 40.6 47 0.0016 31.4 6.5 48 123-170 306-371 (373)
97 3nmd_A CGMP dependent protein 39.4 68 0.0023 22.9 5.4 42 281-324 29-70 (72)
98 1j3n_A 3-oxoacyl-(acyl-carrier 39.2 24 0.00081 34.0 4.2 43 103-145 276-320 (408)
99 4ewp_A 3-oxoacyl-[acyl-carrier 38.6 57 0.0019 30.4 6.7 43 104-146 66-110 (350)
100 2yhw_A Bifunctional UDP-N-acet 38.5 1E+02 0.0034 28.6 8.4 68 99-170 263-338 (343)
101 1zxo_A Conserved hypothetical 38.1 3.5 0.00012 38.0 -2.0 67 97-168 210-276 (291)
102 4dfe_A 3-oxoacyl-[acyl-carrier 37.8 52 0.0018 30.6 6.2 45 98-145 230-274 (333)
103 2ra1_A Surface layer protein; 37.4 56 0.0019 31.3 6.1 69 300-368 160-228 (412)
104 1ted_A PKS18; thiolase fold, s 36.4 21 0.00071 34.3 3.3 44 99-145 284-327 (393)
105 2pk2_A Cyclin-T1, protein TAT; 35.8 7.7 0.00026 37.1 0.0 8 273-280 230-237 (358)
106 1z6r_A MLC protein; transcript 35.4 64 0.0022 30.8 6.6 50 122-171 335-394 (406)
107 3led_A 3-oxoacyl-acyl carrier 35.0 49 0.0017 31.8 5.6 43 104-146 121-165 (392)
108 3epq_A Putative fructokinase; 34.1 74 0.0025 29.1 6.5 49 122-170 225-289 (302)
109 1u0m_A Putative polyketide syn 33.1 1.3E+02 0.0044 28.4 8.3 49 98-146 82-131 (382)
110 1tqy_A Beta-ketoacyl synthase/ 32.7 35 0.0012 33.1 4.2 44 103-146 284-329 (424)
111 1bdg_A Hexokinase; phosphotran 32.7 39 0.0013 33.2 4.6 76 93-171 363-447 (451)
112 2gqd_A 3-oxoacyl-[acyl-carrier 32.7 35 0.0012 33.3 4.2 44 102-145 301-346 (437)
113 3a5r_A Benzalacetone synthase; 31.7 1.2E+02 0.0039 28.9 7.7 49 98-146 96-145 (387)
114 2iwz_A 3-oxoacyl-[acyl-carrier 31.4 37 0.0013 33.1 4.2 45 102-146 301-347 (438)
115 3ov2_A Curcumin synthase; type 31.3 1.3E+02 0.0045 28.7 8.0 50 97-146 99-149 (393)
116 1ee0_A 2-pyrone synthase; poly 31.3 1.4E+02 0.0047 28.5 8.2 49 98-146 105-154 (402)
117 1e5m_A KAS II, beta ketoacyl a 31.2 38 0.0013 32.7 4.2 44 102-145 281-326 (416)
118 4efi_A 3-oxoacyl-(acyl-carrier 31.0 72 0.0024 30.0 6.0 43 104-146 70-114 (354)
119 3il3_A 3-oxoacyl-[acyl-carrier 31.0 77 0.0026 29.3 6.2 43 104-146 62-106 (323)
120 3euo_A Type III pentaketide sy 30.8 1.3E+02 0.0046 28.4 8.0 47 100-146 81-128 (379)
121 1z05_A Transcriptional regulat 30.7 1E+02 0.0036 29.6 7.3 48 122-170 358-415 (429)
122 4dfe_A 3-oxoacyl-[acyl-carrier 30.6 68 0.0023 29.7 5.7 43 104-146 69-113 (333)
123 3h78_A PQS biosynthetic enzyme 30.3 73 0.0025 30.1 5.9 43 104-146 78-122 (359)
124 1ox0_A Beta ketoacyl-acyl carr 30.2 39 0.0013 32.8 4.1 45 103-147 297-343 (430)
125 1i88_A CHS2, chalcone synthase 29.7 1.5E+02 0.005 28.1 8.1 49 98-146 100-149 (389)
126 3awk_A Chalcone synthase-like 29.6 1.6E+02 0.0054 28.1 8.3 49 98-146 113-162 (402)
127 4am6_A Actin-like protein ARP8 29.5 28 0.00095 35.9 2.9 25 122-146 501-525 (655)
128 3ist_A Glutamate racemase; str 29.4 67 0.0023 29.1 5.3 56 106-167 165-220 (269)
129 3nq4_A 6,7-dimethyl-8-ribityll 29.1 55 0.0019 27.2 4.1 60 81-144 10-70 (156)
130 3il6_A 3-oxoacyl-[acyl-carrier 29.1 88 0.003 28.8 6.2 43 104-146 56-100 (321)
131 3oit_A OS07G0271500 protein; t 29.0 1.6E+02 0.0056 27.9 8.3 50 97-146 93-143 (387)
132 2h84_A Steely1; thiolase-fold, 28.9 1.1E+02 0.0037 28.7 7.0 49 98-146 93-142 (374)
133 1xes_A Dihydropinosylvin synth 28.8 1.3E+02 0.0046 28.8 7.7 49 98-146 123-172 (413)
134 2p0u_A Stilbenecarboxylate syn 28.6 1.6E+02 0.0053 28.3 8.1 49 98-146 118-167 (413)
135 1hnj_A Beta-ketoacyl-acyl carr 28.5 95 0.0032 28.3 6.3 44 103-146 54-99 (317)
136 1sz2_A Glucokinase, glucose ki 28.2 99 0.0034 28.5 6.4 68 99-170 243-326 (332)
137 2ebd_A 3-oxoacyl-[acyl-carrier 28.1 81 0.0028 28.6 5.7 46 101-146 51-98 (309)
138 3zyy_X Iron-sulfur cluster bin 28.1 1E+02 0.0036 31.6 6.9 47 86-133 500-546 (631)
139 2ivn_A O-sialoglycoprotein end 27.9 76 0.0026 29.5 5.5 42 97-138 44-85 (330)
140 3s21_A 3-oxoacyl-[ACP] synthas 27.8 95 0.0033 28.9 6.3 53 104-156 72-128 (345)
141 3qvl_A Putative hydantoin race 27.7 56 0.0019 29.1 4.3 38 122-165 175-212 (245)
142 3eno_A Putative O-sialoglycopr 27.7 86 0.0029 29.3 5.8 43 99-141 51-93 (334)
143 1xpm_A 3-hydroxy-3-methylgluta 27.1 51 0.0017 31.6 4.2 45 98-144 203-247 (396)
144 3en9_A Glycoprotease, O-sialog 27.0 66 0.0023 32.2 5.2 57 105-166 237-298 (540)
145 3s21_A 3-oxoacyl-[ACP] synthas 26.9 49 0.0017 30.9 4.0 46 97-145 241-286 (345)
146 2d3m_A Pentaketide chromone sy 26.6 1.7E+02 0.0057 27.9 7.9 50 97-146 112-162 (406)
147 4e1l_A Acetoacetyl-COA thiolas 26.4 99 0.0034 29.4 6.2 66 104-169 33-102 (395)
148 3uhf_A Glutamate racemase; str 26.0 56 0.0019 29.8 4.1 41 121-165 196-236 (274)
149 1xho_A Chorismate mutase; sout 25.7 77 0.0026 25.9 4.3 29 100-128 49-77 (148)
150 3e1h_A PKSIIINC, putative unch 25.7 1.8E+02 0.0061 28.6 8.0 46 101-146 111-157 (465)
151 3gwa_A 3-oxoacyl-(acyl-carrier 25.3 91 0.0031 29.4 5.6 42 105-146 85-128 (365)
152 3goa_A 3-ketoacyl-COA thiolase 25.2 1.1E+02 0.0037 29.1 6.2 66 104-169 31-102 (387)
153 4dd5_A Acetyl-COA acetyltransf 25.0 1.2E+02 0.0042 28.8 6.5 54 104-157 35-92 (396)
154 3gwa_A 3-oxoacyl-(acyl-carrier 24.9 1.1E+02 0.0037 28.8 6.1 44 99-145 263-306 (365)
155 1cza_N Hexokinase type I; stru 24.8 45 0.0015 36.1 3.6 79 93-172 371-461 (917)
156 1u6e_A 3-oxoacyl-[acyl-carrier 24.6 98 0.0034 28.4 5.6 43 104-146 65-109 (335)
157 2gel_A Putative GRAM negative 24.3 81 0.0028 27.7 4.7 38 101-138 35-72 (231)
158 3il3_A 3-oxoacyl-[acyl-carrier 24.3 1.3E+02 0.0046 27.7 6.5 43 100-145 222-264 (323)
159 1u0m_A Putative polyketide syn 24.2 35 0.0012 32.5 2.4 41 101-145 252-292 (382)
160 1zow_A 3-oxoacyl-[acyl-carrier 24.0 1.1E+02 0.0037 27.8 5.8 44 103-146 54-99 (313)
161 2yhx_A Hexokinase B; transfera 24.0 83 0.0028 30.9 5.1 77 93-172 354-444 (457)
162 1dbf_A Protein (chorismate mut 23.9 84 0.0029 25.1 4.1 30 99-128 19-48 (127)
163 3r6m_A YEAZ, resuscitation pro 23.6 77 0.0026 27.6 4.3 64 101-164 36-103 (213)
164 3uun_A Dystrophin; triple heli 23.5 1.8E+02 0.0062 21.6 6.2 42 299-344 9-50 (119)
165 1ub7_A 3-oxoacyl-[acyl-carrier 23.2 1.1E+02 0.0039 27.8 5.8 43 104-146 54-98 (322)
166 3uul_A Utrophin; spectrin repe 23.0 1.7E+02 0.0058 21.8 6.0 17 328-344 34-50 (118)
167 3lwd_A 6-phosphogluconolactona 22.2 1.6E+02 0.0056 25.6 6.3 48 91-143 8-55 (226)
168 1ufy_A Chorismate mutase; shik 22.1 1E+02 0.0035 24.3 4.3 30 99-128 18-48 (122)
169 4am6_A Actin-like protein ARP8 21.9 59 0.002 33.5 3.6 69 2-70 254-341 (655)
170 1mzj_A Beta-ketoacylsynthase I 21.7 1.2E+02 0.0041 28.0 5.6 44 103-146 63-108 (339)
171 2h84_A Steely1; thiolase-fold, 21.6 59 0.002 30.6 3.5 41 101-145 266-312 (374)
172 1tqy_B Actinorhodin polyketide 21.5 39 0.0013 32.6 2.2 31 104-134 281-311 (415)
173 3l3b_A ES1 family protein; ssg 21.5 68 0.0023 28.5 3.6 50 116-171 102-168 (242)
174 2a6a_A Hypothetical protein TM 21.4 83 0.0028 27.5 4.1 40 99-138 44-83 (218)
175 3v7i_A Putative polyketide syn 21.4 2E+02 0.0067 27.7 7.2 44 103-146 140-184 (413)
176 3s3l_A CERJ; acyltransferase, 21.2 1.4E+02 0.0047 28.0 5.9 43 104-146 58-103 (357)
177 3s3l_A CERJ; acyltransferase, 21.1 59 0.002 30.7 3.3 42 100-141 236-278 (357)
178 3s84_A Apolipoprotein A-IV; fo 20.8 3E+02 0.01 24.9 7.9 102 274-375 87-195 (273)
179 3l18_A Intracellular protease 20.8 75 0.0026 25.9 3.6 45 119-169 61-110 (168)
180 2ix4_A 3-oxoacyl-[acyl-carrier 20.7 46 0.0016 32.3 2.5 33 102-134 294-326 (431)
181 3nwp_A 6-phosphogluconolactona 20.7 1.1E+02 0.0037 27.0 4.8 49 88-144 12-60 (233)
182 3ss6_A Acetyl-COA acetyltransf 20.6 1.1E+02 0.0039 29.0 5.3 43 104-146 33-77 (394)
183 3h78_A PQS biosynthetic enzyme 20.5 83 0.0028 29.6 4.2 44 99-145 251-294 (359)
184 3led_A 3-oxoacyl-acyl carrier 20.3 79 0.0027 30.3 4.1 37 97-133 286-322 (392)
185 4hcj_A THIJ/PFPI domain protei 20.2 78 0.0027 26.6 3.6 47 117-169 65-116 (177)
186 2wge_A 3-oxoacyl-[acyl-carrier 20.1 48 0.0017 32.0 2.5 32 103-134 286-317 (416)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=4.3e-61 Score=504.46 Aligned_cols=363 Identities=47% Similarity=0.751 Sum_probs=333.7
Q ss_pred CcccchhHHHHHHhcccCCC-CC----------------------------eEEEecCCCCCchHHHHHHHHHHHHHHHH
Q 041209 1 MRIINEPTAAAIAYGLDNKA-SR----------------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFK 51 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~~-~~----------------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~ 51 (412)
++||+||+|||++|++.... +. +|+++.||.+|||++||.+|++|+.++|+
T Consensus 166 ~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~ 245 (605)
T 4b9q_A 166 KRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFK 245 (605)
T ss_dssp EEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHHHHH
T ss_pred EEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHHHHh
Confidence 47999999999999987643 11 58999999999999999999999999999
Q ss_pred hhccCCCcccHHHHHHhhc--------------ceEEeeecccC----ceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHh
Q 041209 52 RKHKKDISGNARALRRLQT--------------TTIEIDSLYEG----IDFYATITRARFEELNMDLFRKCMEPVEKCLR 113 (412)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~~--------------~~i~i~~~~~~----~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~ 113 (412)
.+++.++..+++++.+|+. +.+.++.+..+ .++.++|||++|+++++|+++++..+++++|+
T Consensus 246 ~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~~~L~ 325 (605)
T 4b9q_A 246 KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQ 325 (605)
T ss_dssp HHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred hhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888888887766 34555554433 67889999999999999999999999999999
Q ss_pred hcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHhCCCCccccceEEEeccCcccc
Q 041209 114 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNKKVQDLLLLDVTPLSLG 193 (412)
Q Consensus 114 ~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~~~~~~~~~~~~~~dv~~~s~g 193 (412)
++++.+.+|+.|+||||+||||+|++.|++.| +.++..+.||++|||+|||++|+.+++. .+++.+.|++|++||
T Consensus 326 ~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l~dv~p~slg 400 (605)
T 4b9q_A 326 DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLG 400 (605)
T ss_dssp HTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEEECBCSSCEE
T ss_pred HcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCceEEEeeeeeEEE
Confidence 99999999999999999999999999999999 7888999999999999999999999964 578999999999999
Q ss_pred ccccC-------------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCCCCCCeEEEEEEecC
Q 041209 194 IETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDA 248 (412)
Q Consensus 194 i~~~~-------------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~~g~~~i~v~f~id~ 248 (412)
|++.+ |+|+.+.|+||||++..+.+|..||+|.++|+||.|+|.++|+|+|++|.
T Consensus 401 ie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~ 480 (605)
T 4b9q_A 401 IETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDA 480 (605)
T ss_dssp EEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECT
T ss_pred EEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcC
Confidence 99865 89999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHHHHHHhhhhhcchhhhhcCC
Q 041209 249 NGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNMSNTVRDEKFAGKL 324 (412)
Q Consensus 249 ~g~l~v~a~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~ 324 (412)
||+|+|++.++.|+ ++|++. ..||+++|++++++++++..+|+..+++.++||+||+|+|.+++.+++ +..++
T Consensus 481 ~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~--~~~~~ 557 (605)
T 4b9q_A 481 DGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEE--AGDKL 557 (605)
T ss_dssp TSCEEEEEEETTTCCEECCEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HGGGS
T ss_pred CcEEEEEEEecCCCcEEEEEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhC
Confidence 99999999999988 778776 579999999999999999999999999999999999999999999985 77899
Q ss_pred CHHhHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHh
Q 041209 325 DPADKQKIEKAIDEAIEWLDGNQLVEVDELEDKLKELKGFCNPIIAKMYE 374 (412)
Q Consensus 325 ~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~e 374 (412)
++++++.+...++++++||+.+ +.++|++++++|++.+.++..++++
T Consensus 558 ~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 558 PADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999975 6899999999999999999999875
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=6.9e-60 Score=499.34 Aligned_cols=372 Identities=28% Similarity=0.455 Sum_probs=331.3
Q ss_pred CcccchhHHHHHHhcccCC-------CCC------------------------eEEEecCCCCCchHHHHHHHHHHHHHH
Q 041209 1 MRIINEPTAAAIAYGLDNK-------ASR------------------------TVKATAGDTHLGGEDFDNRLVNHFVAE 49 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~-------~~~------------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~ 49 (412)
++||+||+|||++|++.+. .+. +|+++.||.+|||++||+.|++|+.++
T Consensus 169 ~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~ 248 (675)
T 3d2f_A 169 VRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADE 248 (675)
T ss_dssp EEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHH
T ss_pred EEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHHHHHHHH
Confidence 4799999999999987542 111 689999999999999999999999999
Q ss_pred HHhhccCCCcccHHHHHHhhc--------------ceEEeeecccCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 041209 50 FKRKHKKDISGNARALRRLQT--------------TTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDS 115 (412)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~l~~--------------~~i~i~~~~~~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a 115 (412)
|..++++++..+++++.+|+. +.+.++.++++.++.++|||++|+++|+|+++++..+++++|+++
T Consensus 249 f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~~~L~~a 328 (675)
T 3d2f_A 249 FKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQA 328 (675)
T ss_dssp HHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHHHHHHHH
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999998888888877766 345666777788999999999999999999999999999999999
Q ss_pred CCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHhCCCCccccceEEEeccCcccccc
Q 041209 116 KIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNKKVQDLLLLDVTPLSLGIE 195 (412)
Q Consensus 116 ~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~~~~~~~~~~~~~~dv~~~s~gi~ 195 (412)
++++++|+.|+||||+||||.|++.|++.| +.++..++||++|||+|||++|+.++ +.++++++.+.|++|++|||+
T Consensus 329 ~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls--~~~~v~~~~l~Dv~p~slgi~ 405 (675)
T 3d2f_A 329 KLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHS--PTLRVRPFKFEDIHPYSVSYS 405 (675)
T ss_dssp TCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTC--SSCCCCCCEEEEEECSCEEEE
T ss_pred CCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhC--CCCcccceEEEeeeecceEee
Confidence 999999999999999999999999999999 67888999999999999999999998 456788999999999999998
Q ss_pred ccCCC-------------------------CCeEEEEE-eeccccccc-CCceeeEEEEeCCCCCCCCCC-eEEEEEEec
Q 041209 196 TAGDN-------------------------RPSVLIQV-YEGERARTK-DNNLLGKFELKGIPPAPRGVP-QINVCFDID 247 (412)
Q Consensus 196 ~~~d~-------------------------q~~i~i~i-~eG~~~~~~-~n~~l~~~~l~~i~~~~~g~~-~i~v~f~id 247 (412)
+.+.. .....+.+ |+|++..+. +|..||+|.++||||.|+|.+ +|+|+|.+|
T Consensus 406 ~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i~v~f~id 485 (675)
T 3d2f_A 406 WDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKLRCD 485 (675)
T ss_dssp ECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEEEEEEEEC
T ss_pred ecCCCCCcceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceEEEEEEEc
Confidence 86421 01233444 678888887 999999999999999999985 999999999
Q ss_pred CceeEEEEEE----------eccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHHHHHHhhhh
Q 041209 248 ANGILHVSAK----------DKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNMSN 313 (412)
Q Consensus 248 ~~g~l~v~a~----------~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~ 313 (412)
.||+|+|++. ++.++ ++|++...+||+++++++++++.++..+|+..+++.++||+||+|+|.+|+
T Consensus 486 ~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~ 565 (675)
T 3d2f_A 486 PSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRG 565 (675)
T ss_dssp TTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999995 56666 777776568999999999999999999999999999999999999999999
Q ss_pred hcchhhhhcCCCHHhHHHHHHHHHHHHHHHcCC-CCcCHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 041209 314 TVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGN-QLVEVDELEDKLKELKGFCNPIIAKMYEGG 376 (412)
Q Consensus 314 ~l~~~~~~~~~~~~e~~~i~~~l~~~~~wl~~~-~~~~~~~~~~~~~~L~~~~~~i~~r~~e~~ 376 (412)
.|++ .+..++++++++++...++++++||+++ .+++.++|+.++++|++.++||..|+++++
T Consensus 566 ~l~~-~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~ 628 (675)
T 3d2f_A 566 KLEE-EYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKE 628 (675)
T ss_dssp HHTT-TTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9975 5888999999999999999999999864 578899999999999999999999998764
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=4e-60 Score=497.08 Aligned_cols=363 Identities=47% Similarity=0.752 Sum_probs=331.2
Q ss_pred CcccchhHHHHHHhcccCC-CCC----------------------------eEEEecCCCCCchHHHHHHHHHHHHHHHH
Q 041209 1 MRIINEPTAAAIAYGLDNK-ASR----------------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFK 51 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~-~~~----------------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~ 51 (412)
++||+||+|||++|+++.. .+. +|+++.||.+|||++||+.|++|+.++|+
T Consensus 166 ~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~ 245 (605)
T 2kho_A 166 KRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFK 245 (605)
T ss_dssp EEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHHHHH
T ss_pred EEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHHHHH
Confidence 4799999999999998764 111 67788999999999999999999999999
Q ss_pred hhccCCCcccHHHHHHhhc--------------ceEEeeecccC----ceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHh
Q 041209 52 RKHKKDISGNARALRRLQT--------------TTIEIDSLYEG----IDFYATITRARFEELNMDLFRKCMEPVEKCLR 113 (412)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~~--------------~~i~i~~~~~~----~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~ 113 (412)
.+++.++..+++++.+|+. +.+.++.+.++ .++.++|||++|+++|+|+++++..+++++|+
T Consensus 246 ~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~ 325 (605)
T 2kho_A 246 KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQ 325 (605)
T ss_dssp HHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHHHHHH
T ss_pred HHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888887777776665 34556655442 56778999999999999999999999999999
Q ss_pred hcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHhCCCCccccceEEEeccCcccc
Q 041209 114 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNKKVQDLLLLDVTPLSLG 193 (412)
Q Consensus 114 ~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~~~~~~~~~~~~~~dv~~~s~g 193 (412)
++++.+.+|+.|+||||+||||+|++.|++.| +.++..++||++|||+|||++|+.+++. ++++.+.|++|++||
T Consensus 326 ~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~l~dv~p~slg 400 (605)
T 2kho_A 326 DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLG 400 (605)
T ss_dssp TTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCCCCSBCCCCCEE
T ss_pred HcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCceEEeeeeeecc
Confidence 99999999999999999999999999999999 6788899999999999999999999854 578999999999999
Q ss_pred ccccC-------------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCCCCCCeEEEEEEecC
Q 041209 194 IETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDA 248 (412)
Q Consensus 194 i~~~~-------------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~~g~~~i~v~f~id~ 248 (412)
+++.+ |+|+.+.|+||||++..+.+|..||+|.++|+||.|+|.++|+|+|.+|.
T Consensus 401 i~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~ 480 (605)
T 2kho_A 401 IETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDA 480 (605)
T ss_dssp EEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEECT
T ss_pred ccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEcC
Confidence 98864 88999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHHHHHHhhhhhcchhhhhcCC
Q 041209 249 NGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNMSNTVRDEKFAGKL 324 (412)
Q Consensus 249 ~g~l~v~a~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~ 324 (412)
||+|+|++.++.|+ ++|++. ..||++++++++++++++..+|+..+++.++||+||+|+|.+|+.|++ +..++
T Consensus 481 ~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~--~~~~~ 557 (605)
T 2kho_A 481 DGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEE--AGDKL 557 (605)
T ss_dssp TSCEEEEEEETTTCCEEEEEECTT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HGGGS
T ss_pred CCceeEEEEEcCCCceeecccccc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhccC
Confidence 99999999999888 677776 789999999999999999999999999999999999999999999976 78899
Q ss_pred CHHhHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHh
Q 041209 325 DPADKQKIEKAIDEAIEWLDGNQLVEVDELEDKLKELKGFCNPIIAKMYE 374 (412)
Q Consensus 325 ~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~e 374 (412)
++++++.+...++++++||+++ +.++|++++++|++.++|+..|+++
T Consensus 558 ~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 558 PADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999954 8999999999999999999999874
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1.9e-53 Score=442.37 Aligned_cols=316 Identities=82% Similarity=1.212 Sum_probs=288.7
Q ss_pred CcccchhHHHHHHhcccCCC--CC------------------------eEEEecCCCCCchHHHHHHHHHHHHHHHHhhc
Q 041209 1 MRIINEPTAAAIAYGLDNKA--SR------------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFKRKH 54 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~~--~~------------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~ 54 (412)
++||+||+|||++|+..... +. +|+++.|+.+|||++||+.|++|+.++|..++
T Consensus 170 ~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~ 249 (554)
T 1yuw_A 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 249 (554)
T ss_dssp EEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 47899999999999987642 11 68889999999999999999999999999999
Q ss_pred cCCCcccHHHHHHhhc--------------ceEEeeecccCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 041209 55 KKDISGNARALRRLQT--------------TTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKS 120 (412)
Q Consensus 55 ~~~~~~~~~~~~~l~~--------------~~i~i~~~~~~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~~~ 120 (412)
+.++..+++++.+|+. +.+.++.++++.++.+.|||++|+++++|+++++..+++++|+++++.+.
T Consensus 250 ~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~a~~~~~ 329 (554)
T 1yuw_A 250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKS 329 (554)
T ss_dssp SCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHHHTTCCGG
T ss_pred CCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChh
Confidence 9888877777766655 34666666778889999999999999999999999999999999999999
Q ss_pred ccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHhCCCCccccceEEEeccCccccccccC--
Q 041209 121 QVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNKKVQDLLLLDVTPLSLGIETAG-- 198 (412)
Q Consensus 121 ~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~~~~~~~~~~~~~~dv~~~s~gi~~~~-- 198 (412)
+|+.|+||||+||+|+|++.|++.|++.++..+.||++|||+|||++|+.+++...++++++.+.|++|++||+++.+
T Consensus 330 ~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~slgi~~~~g~ 409 (554)
T 1yuw_A 330 QIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGV 409 (554)
T ss_dssp GCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCEEEEETTTE
T ss_pred hCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEEEEEecCce
Confidence 999999999999999999999999977888899999999999999999999865456678899999999999998864
Q ss_pred -----------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCCCCCCeEEEEEEecCceeEEEE
Q 041209 199 -----------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255 (412)
Q Consensus 199 -----------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~~g~~~i~v~f~id~~g~l~v~ 255 (412)
|+|+.+.|+||||++..+.+|..||+|.++|+|+.|+|.++|+|+|.+|.||+|+|+
T Consensus 410 ~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~ 489 (554)
T 1yuw_A 410 MTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVS 489 (554)
T ss_dssp EEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTCCEEEE
T ss_pred EEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEccCceEEEE
Confidence 889999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHHHHHHhhhhhcc
Q 041209 256 AKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNMSNTVR 316 (412)
Q Consensus 256 a~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l~ 316 (412)
+.++.++ ++|++..++||++++++++++++++..+|+..+++.++||+||+|+|.+|+.|+
T Consensus 490 a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~ 554 (554)
T 1yuw_A 490 AVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVE 554 (554)
T ss_dssp EEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCCC
T ss_pred EEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999888 677777678999999999999999999999999999999999999999998763
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=4.4e-49 Score=406.09 Aligned_cols=299 Identities=53% Similarity=0.841 Sum_probs=264.6
Q ss_pred CcccchhHHHHHHhcccCCCCC------------------------eEEEecCCCCCchHHHHHHHHHHHHHHHHhhccC
Q 041209 1 MRIINEPTAAAIAYGLDNKASR------------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKK 56 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~~~~------------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~ 56 (412)
++|++||+|||++|+.....+. +|+++.|+.++||++||+.|++|+.++|+.+++.
T Consensus 140 ~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~ 219 (509)
T 2v7y_A 140 ERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGI 219 (509)
T ss_dssp EEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSC
T ss_pred EEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4789999999999998754321 7888899999999999999999999999999888
Q ss_pred CCcccHHHHHHhhc--------------ceEEeeeccc---C-ceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 041209 57 DISGNARALRRLQT--------------TTIEIDSLYE---G-IDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKID 118 (412)
Q Consensus 57 ~~~~~~~~~~~l~~--------------~~i~i~~~~~---~-~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~ 118 (412)
++..+++++.+|+. +.+.++.+.+ + .++.++|||++|+++++|+++++..+++++|+++++.
T Consensus 220 ~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~ 299 (509)
T 2v7y_A 220 DLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLT 299 (509)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHHHTCC
T ss_pred CcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88777766655554 3455555443 2 4677899999999999999999999999999999999
Q ss_pred CCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHhCCCCccccceEEEeccCccccccccC
Q 041209 119 KSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNKKVQDLLLLDVTPLSLGIETAG 198 (412)
Q Consensus 119 ~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~~~~~~~~~~~~~~dv~~~s~gi~~~~ 198 (412)
+.+|+.|+||||+||+|.|++.|++.| +.++....||++|||+|||++|+.+++. ++++.+.|++|++||+++.+
T Consensus 300 ~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~p~slgi~~~~ 374 (509)
T 2v7y_A 300 PADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPLSLGIETMG 374 (509)
T ss_dssp GGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBCSSEEEEEETT
T ss_pred hhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEeeccccceeecC
Confidence 999999999999999999999999999 6788889999999999999999999864 57899999999999998764
Q ss_pred -------------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCCCCCCeEEEEEEecCceeEE
Q 041209 199 -------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILH 253 (412)
Q Consensus 199 -------------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~~g~~~i~v~f~id~~g~l~ 253 (412)
|+|+.+.|.||||++..+.+|..||+|.++++|+.|+|.++|+|+|++|.||+|+
T Consensus 375 ~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~ 454 (509)
T 2v7y_A 375 GVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVH 454 (509)
T ss_dssp TEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEE
T ss_pred CceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEE
Confidence 8899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHH
Q 041209 254 VSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLE 305 (412)
Q Consensus 254 v~a~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE 305 (412)
|++.++.++ ++|++. ..||+++++++++++.++..+|+..+++.++||+||
T Consensus 455 v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 455 VRAKDLGTNKEQSITIKSS-SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp EEEEETTTCCEEEEEECSS-CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred EEEEEcCCCcEEEEEEEec-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 999999888 677776 779999999999999999999999999999999987
No 6
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=5.1e-33 Score=253.95 Aligned_cols=187 Identities=45% Similarity=0.703 Sum_probs=175.7
Q ss_pred eEEEeccCccccccccC-------------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCCCC
Q 041209 182 LLLLDVTPLSLGIETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRG 236 (412)
Q Consensus 182 ~~~~dv~~~s~gi~~~~-------------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~~g 236 (412)
+++.|++|+||||++.+ |+|+.+.|.||||++..+.+|..||+|.|.|+||+|+|
T Consensus 1 ~~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G 80 (219)
T 4e81_A 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG 80 (219)
T ss_dssp CCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTT
T ss_pred CeEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCC
Confidence 35789999999999875 89999999999999999999999999999999999999
Q ss_pred CCeEEEEEEecCceeEEEEEEeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHHHHHHhhh
Q 041209 237 VPQINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNMS 312 (412)
Q Consensus 237 ~~~i~v~f~id~~g~l~v~a~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r 312 (412)
.++|+|+|.+|.||+|+|++.++.|| ++|++. ..||+++|+++++++++|..+|+..+++.++||.||+|+|.+|
T Consensus 81 ~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~-~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~ 159 (219)
T 4e81_A 81 MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTR 159 (219)
T ss_dssp CSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT-CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeCCCCCEeeeeeccccCccceEeeecc-ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 778776 5699999999999999999999999999999999999999999
Q ss_pred hhcchhhhhcCCCHHhHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHh
Q 041209 313 NTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLVEVDELEDKLKELKGFCNPIIAKMYE 374 (412)
Q Consensus 313 ~~l~~~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~e 374 (412)
+.|++ +..++++++++.+...++++++||+++ +.++|+.++++|++.+.||..|+++
T Consensus 160 ~~l~~--~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 160 KQVEE--AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHH--HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHH--hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99986 778999999999999999999999986 7999999999999999999999886
No 7
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.97 E-value=2.2e-30 Score=238.53 Aligned_cols=186 Identities=31% Similarity=0.518 Sum_probs=172.3
Q ss_pred EeccCccccccccC-------------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCCCCCCe
Q 041209 185 LDVTPLSLGIETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQ 239 (412)
Q Consensus 185 ~dv~~~s~gi~~~~-------------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~~g~~~ 239 (412)
.|++|++|||++.+ |+|+.+.|+||||++..+.+|..||+|.|.|+||.|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37889999988764 88999999999999999999999999999999999999999
Q ss_pred EEEEEEecCceeEEEEEEeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHHHHHHhhhhhc
Q 041209 240 INVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNMSNTV 315 (412)
Q Consensus 240 i~v~f~id~~g~l~v~a~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l 315 (412)
|+|+|.+|.||+|+|++.+..++ ++|++. ..||+++++++++++..|..+|+..+++.+++|.||+|+|.+|+.|
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l 159 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGAL 159 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888 677766 5599999999999999999999999999999999999999999999
Q ss_pred chhhhhcCCCHHhHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 041209 316 RDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLVEVDELEDKLKELKGFCNPIIAKMYEGG 376 (412)
Q Consensus 316 ~~~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~e~~ 376 (412)
.+ +..++++++++.+...++++++||+++ +.++|+.++++|++.+.||..|++.+.
T Consensus 160 ~~--~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 160 AA--DAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HH--HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hh--hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 678899999999999999999999954 689999999999999999999887543
No 8
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.95 E-value=2.2e-27 Score=237.40 Aligned_cols=173 Identities=78% Similarity=1.189 Sum_probs=155.3
Q ss_pred CcccchhHHHHHHhcccCC----CCC------------------------eEEEecCCCCCchHHHHHHHHHHHHHHHHh
Q 041209 1 MRIINEPTAAAIAYGLDNK----ASR------------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFKR 52 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~----~~~------------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~ 52 (412)
++|++||+|||++|+.... .+. +++++.|+..+||++||+.|++++.++|..
T Consensus 189 ~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~ 268 (404)
T 3i33_A 189 LRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKR 268 (404)
T ss_dssp EEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4689999999999998765 211 688889999999999999999999999999
Q ss_pred hccCCCcccHHHHHHhhc--------------ceEEeeecccCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 041209 53 KHKKDISGNARALRRLQT--------------TTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKID 118 (412)
Q Consensus 53 ~~~~~~~~~~~~~~~l~~--------------~~i~i~~~~~~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~ 118 (412)
+++.++..+++.+.+|+. +.+.++.+.++.++.+.|||++|+++++|+++++..++.++|+++++.
T Consensus 269 ~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 348 (404)
T 3i33_A 269 KHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLD 348 (404)
T ss_dssp HHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCC
T ss_pred HhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 998888777776666655 456777778888999999999999999999999999999999999999
Q ss_pred CCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHhC
Q 041209 119 KSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 173 (412)
Q Consensus 119 ~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~~ 173 (412)
+.+|+.|+||||+||+|+|++.|++.|++.++....||++|||.|||++|+++++
T Consensus 349 ~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 349 KGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp GGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999998888889999999999999999999874
No 9
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.95 E-value=5.3e-27 Score=235.08 Aligned_cols=172 Identities=31% Similarity=0.570 Sum_probs=150.1
Q ss_pred CcccchhHHHHHHhcccC---CCCC------------------------eEEEecCCCCCchHHHHHHHHHHHHHHHHhh
Q 041209 1 MRIINEPTAAAIAYGLDN---KASR------------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFKRK 53 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~---~~~~------------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~ 53 (412)
++||+||+|||++|+... ..+. +++++.|+..+||++||+.|++|+..+|..+
T Consensus 181 ~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~ 260 (409)
T 4gni_A 181 LQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKK 260 (409)
T ss_dssp EEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999864 1111 6888888999999999999999999999998
Q ss_pred cc--CCCcccHHHHHHhhc--------------ceEEeeecccCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 041209 54 HK--KDISGNARALRRLQT--------------TTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKI 117 (412)
Q Consensus 54 ~~--~~~~~~~~~~~~l~~--------------~~i~i~~~~~~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~ 117 (412)
++ .++..+++.+.+|+. +.+.++.+.++.++.++|||++|+++++|+++++..+|+++|+++++
T Consensus 261 ~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~ 340 (409)
T 4gni_A 261 NPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAGL 340 (409)
T ss_dssp STTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHHTTC
T ss_pred hCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88 777777776666654 56778888888999999999999999999999999999999999999
Q ss_pred CCCccceEEEecCCcCcHHHHHHHHHhhCCC-cc------cccCCCchhHHhHHHHHHHHHh
Q 041209 118 DKSQVHDVVLVGGSTRIPKVQQLLQDFFNGK-EL------CKSINPDEAVAYGAAVQAAILS 172 (412)
Q Consensus 118 ~~~~id~V~LvGGssriP~V~~~l~~~f~~~-~~------~~~~~pd~aVA~GAa~~a~~l~ 172 (412)
.+.+|+.|+||||+||+|+|++.|++.|+.. .+ ...+||++|||+|||++|+...
T Consensus 341 ~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~ 402 (409)
T 4gni_A 341 DPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQ 402 (409)
T ss_dssp CGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHH
T ss_pred CHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhh
Confidence 9999999999999999999999999999543 23 5788999999999999999886
No 10
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.95 E-value=7.7e-27 Score=232.44 Aligned_cols=172 Identities=63% Similarity=1.012 Sum_probs=154.2
Q ss_pred CcccchhHHHHHHhcccCCC-CC------------------------eEEEecCCCCCchHHHHHHHHHHHHHHHHhhcc
Q 041209 1 MRIINEPTAAAIAYGLDNKA-SR------------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHK 55 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~~-~~------------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~ 55 (412)
++|++||+|||++|+..... +. +++++.|+..+||++||+.|++|+.++|..+++
T Consensus 184 ~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~ 263 (394)
T 3qfu_A 184 LRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHG 263 (394)
T ss_dssp EEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHHHHHHHHcC
Confidence 46899999999999876643 11 788889999999999999999999999999999
Q ss_pred CCCcccHHHHHHhhc--------------ceEEeeecccCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 041209 56 KDISGNARALRRLQT--------------TTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQ 121 (412)
Q Consensus 56 ~~~~~~~~~~~~l~~--------------~~i~i~~~~~~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~~~~ 121 (412)
.++..+++.+.+|+. +.+.++.+.++.++.+.|||++|+++++++++++..++.++|+++++.+.+
T Consensus 264 ~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~ 343 (394)
T 3qfu_A 264 IDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKD 343 (394)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGG
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 888777776666554 456777778888999999999999999999999999999999999999999
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHh
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 172 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~ 172 (412)
|+.|+|+||+|++|.|++.|++.|++.++....||++|||.|||++|++++
T Consensus 344 i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 344 VDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred CCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999888888999999999999999999874
No 11
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.94 E-value=6.6e-26 Score=200.42 Aligned_cols=136 Identities=57% Similarity=0.839 Sum_probs=124.3
Q ss_pred cceEEEeccCccccccccC-------------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCC
Q 041209 180 QDLLLLDVTPLSLGIETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAP 234 (412)
Q Consensus 180 ~~~~~~dv~~~s~gi~~~~-------------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~ 234 (412)
..+.+.|++|++|||++.+ |+|+.+.|.||||++..+.+|..||+|.|.|+||+|
T Consensus 18 ~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~p 97 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAP 97 (182)
T ss_dssp ------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCC
T ss_pred CCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCCC
Confidence 4688999999999999875 899999999999999999999999999999999999
Q ss_pred CCCCeEEEEEEecCceeEEEEEEeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHHHHHHh
Q 041209 235 RGVPQINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYN 310 (412)
Q Consensus 235 ~g~~~i~v~f~id~~g~l~v~a~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~ 310 (412)
+|.++|+|+|.+|.||+|+|+|.++.++ ++|++. +.||+++|+++++++++|..+|++.+++.++||.||+|+|.
T Consensus 98 ~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy~ 176 (182)
T 3n8e_A 98 RGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHD 176 (182)
T ss_dssp TTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 778877 88999999999999999999999999999999999999999
Q ss_pred hhhhcc
Q 041209 311 MSNTVR 316 (412)
Q Consensus 311 ~r~~l~ 316 (412)
+|+.|+
T Consensus 177 ~~~~l~ 182 (182)
T 3n8e_A 177 TETKME 182 (182)
T ss_dssp CSCCCC
T ss_pred HHHhhC
Confidence 998763
No 12
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.93 E-value=2.3e-25 Score=221.18 Aligned_cols=171 Identities=49% Similarity=0.785 Sum_probs=143.4
Q ss_pred CcccchhHHHHHHhcccCC-CCC----------------------------eEEEecCCCCCchHHHHHHHHHHHHHHHH
Q 041209 1 MRIINEPTAAAIAYGLDNK-ASR----------------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFK 51 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~-~~~----------------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~ 51 (412)
+++++||+|||++|+.... .+. +++++.|+..+||++||+.|++|+.++|.
T Consensus 166 ~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~ 245 (383)
T 1dkg_D 166 KRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFK 245 (383)
T ss_dssp SCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHH
T ss_pred EEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 4789999999999998653 111 45566788899999999999999999999
Q ss_pred hhccCCCcccHHHHHHhhc--------------ceEEeeeccc---C-ceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHh
Q 041209 52 RKHKKDISGNARALRRLQT--------------TTIEIDSLYE---G-IDFYATITRARFEELNMDLFRKCMEPVEKCLR 113 (412)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~~--------------~~i~i~~~~~---~-~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~ 113 (412)
.+++.++..+++.+.+|+. ..+.++.+.+ + .++.++|||++|+++++|+++++..+++++|+
T Consensus 246 ~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~~l~ 325 (383)
T 1dkg_D 246 KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQ 325 (383)
T ss_dssp HHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred HHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887766655544443 2345554433 2 45678999999999999999999999999999
Q ss_pred hcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHh
Q 041209 114 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 172 (412)
Q Consensus 114 ~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~ 172 (412)
++++.+.+|+.|+|+||+|++|.|++.|++.| +.++....||++|||+|||++|++++
T Consensus 326 ~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 326 DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp TTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 99998899999999999999999999999999 67788889999999999999997653
No 13
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.90 E-value=2.3e-23 Score=179.48 Aligned_cols=122 Identities=72% Similarity=1.107 Sum_probs=115.3
Q ss_pred EEeccCccccccccC-------------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCCCCCC
Q 041209 184 LLDVTPLSLGIETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVP 238 (412)
Q Consensus 184 ~~dv~~~s~gi~~~~-------------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~~g~~ 238 (412)
+.|++|++|||++.+ |+|+.+.|.||||++..+.+|.+||+|.|.|+||.|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 579999999999865 8999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCceeEEEEEEeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHH
Q 041209 239 QINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLE 305 (412)
Q Consensus 239 ~i~v~f~id~~g~l~v~a~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE 305 (412)
+|+|+|.+|.||+|+|+|.++.++ ++|.+..+.||+++|+++++++++|..+|+..+++.++||.||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 999999999999999999999998 7888877889999999999999999999999999999999886
No 14
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.89 E-value=1.5e-23 Score=180.42 Aligned_cols=122 Identities=67% Similarity=1.066 Sum_probs=110.7
Q ss_pred EEeccCccccccccC-------------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCCCCCC
Q 041209 184 LLDVTPLSLGIETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVP 238 (412)
Q Consensus 184 ~~dv~~~s~gi~~~~-------------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~~g~~ 238 (412)
+.|++|++|||++.+ |+|+.+.|.||||++..+.+|.+||+|.|.|+||.|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 579999999999875 8999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCceeEEEEEEeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHH
Q 041209 239 QINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLE 305 (412)
Q Consensus 239 ~i~v~f~id~~g~l~v~a~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE 305 (412)
+|+|+|.+|.||+|+|+|.++.|| ++|++..+.||+++|+++++++++|..+|+..+++.++||.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 999999999999999999999998 7888887889999999999999999999999999999999875
No 15
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.88 E-value=3e-23 Score=178.30 Aligned_cols=121 Identities=59% Similarity=0.901 Sum_probs=112.2
Q ss_pred EEeccCccccccccC-------------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCCCCCC
Q 041209 184 LLDVTPLSLGIETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVP 238 (412)
Q Consensus 184 ~~dv~~~s~gi~~~~-------------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~~g~~ 238 (412)
+.|++|++|||++.+ |+|+.+.|.||||++..+.+|.+||+|.|.|+||.|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 579999999999875 8999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCceeEEEEEEeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHH
Q 041209 239 QINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLE 305 (412)
Q Consensus 239 ~i~v~f~id~~g~l~v~a~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE 305 (412)
+|+|+|.+|.||+|+|+|.++.|| ++|++. +.||+++|+++++++++|..+|+..+++.++||.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 999999999999999999999998 788887 889999999999999999999998888888888764
No 16
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.85 E-value=1.6e-21 Score=168.40 Aligned_cols=122 Identities=61% Similarity=0.990 Sum_probs=113.3
Q ss_pred EEeccCccccccccC-------------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCCCCCC
Q 041209 184 LLDVTPLSLGIETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVP 238 (412)
Q Consensus 184 ~~dv~~~s~gi~~~~-------------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~~g~~ 238 (412)
+.|++|++|||++.+ |+|+.+.|.||||++..+.+|..||+|.+.|+||.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 579999999998865 8999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCceeEEEEEEeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHH
Q 041209 239 QINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLE 305 (412)
Q Consensus 239 ~i~v~f~id~~g~l~v~a~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE 305 (412)
+|+|+|.+|.||+|+|++.+..++ ++|.+..+.||.++++++++++.+|..+|+..+++.++||+||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 999999999999999999999888 6777776789999999999999999999999999999999875
No 17
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.82 E-value=2.7e-20 Score=182.02 Aligned_cols=164 Identities=22% Similarity=0.330 Sum_probs=126.8
Q ss_pred CcccchhHHHHHHhcccCCCCC--------------------eEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCcc
Q 041209 1 MRIINEPTAAAIAYGLDNKASR--------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISG 60 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~~~~--------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~ 60 (412)
+++++||+|||++|+.....+. .++ ..++..+||++||+.|++++.++|.. ++.
T Consensus 126 ~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~-~~~~~~lGG~~id~~l~~~l~~~~~~----~~~- 199 (344)
T 1jce_A 126 VFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIV-TWESIRIAGDEMDEAIVQYVRETYRV----AIG- 199 (344)
T ss_dssp EEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEE-EEEEESCSHHHHHHHHHHHHHHHHCE----ECC-
T ss_pred EeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEE-eeCCCCccChhHHHHHHHHHHHHhCc----ccC-
Confidence 3689999999999987654322 333 34568999999999999999887642 221
Q ss_pred cHHHHHHhhc-------------ceEEee--ecccCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--CCcc-
Q 041209 61 NARALRRLQT-------------TTIEID--SLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKID--KSQV- 122 (412)
Q Consensus 61 ~~~~~~~l~~-------------~~i~i~--~~~~~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~--~~~i- 122 (412)
.....++|. ..+.+. .+.++.+..++|||++|+++++|+++++..+|+++|++++.. .+.+
T Consensus 200 -~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~ 278 (344)
T 1jce_A 200 -ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIE 278 (344)
T ss_dssp -HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred -HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchhh
Confidence 233344433 123332 234566778999999999999999999999999999987532 2334
Q ss_pred ceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHh
Q 041209 123 HDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 172 (412)
Q Consensus 123 d~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~ 172 (412)
+.|+|+||+|++|.|++.|++.| +.++....||++|||+||+++|..++
T Consensus 279 ~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 279 RGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred CcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 68999999999999999999999 66788888999999999999998654
No 18
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.73 E-value=1e-17 Score=137.14 Aligned_cols=111 Identities=46% Similarity=0.779 Sum_probs=77.4
Q ss_pred HHHHHHHHHhhHHHHHHhhhhhcchhhhhcCCCHHhHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHH
Q 041209 293 EIKKKVEAKNSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLVEVDELEDKLKELKGFCNPIIAKM 372 (412)
Q Consensus 293 ~~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~ 372 (412)
..+++.++||.||+|||.++..|.+..+..+++++++..|...|+++.+||+.+.+++.++|+.++++|++.+.||..|+
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~ 82 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL 82 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999876688999999999999999999999998878899999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCC
Q 041209 373 YEGGASGDVPMGGGAEMPGGGHGKAETGGASGGPKIEEVD 412 (412)
Q Consensus 373 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (412)
++.++ +|+||++|+ +++++++++||+|+|||
T Consensus 83 y~~~~-----~~~~~~~~~----~~~~~~~~~gp~~eevd 113 (113)
T 3lof_A 83 YQGAG-----GPGPGGFGA----QGPKGGSGSGPTIEEVD 113 (113)
T ss_dssp HHC-------------------------------------
T ss_pred HHhcc-----CCCCCCCCC----CCCCCCCCCCCCCCCCC
Confidence 97542 112333442 12223346789999998
No 19
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.67 E-value=3.4e-17 Score=134.09 Aligned_cols=112 Identities=50% Similarity=0.837 Sum_probs=73.1
Q ss_pred HHHHHhhHHHHHHhhhhhcchhhhhcCCCHHhHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 041209 297 KVEAKNSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLVEVDELEDKLKELKGFCNPIIAKMYEGG 376 (412)
Q Consensus 297 ~~~a~N~lE~~i~~~r~~l~~~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~e~~ 376 (412)
+.++||.||+|||.++..|.++.+...+++++++.|...+.++.+||+++.+++.++|+.++++|++.+.+|..|+++.+
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~ 81 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 81 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46789999999999999997445788999999999999999999999865556889999999999999999999998643
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCC
Q 041209 377 ASGDVPMGGGAEMPGGGHGKAETGGASGGPKIEEVD 412 (412)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (412)
+++++++||++|+ | ++++++++..||+|+|||
T Consensus 82 --~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ee~d 113 (113)
T 1ud0_A 82 --GGMPGGMPGGFPG-G-GAPPSGGASSGPTIEEVD 113 (113)
T ss_dssp --CCCCCC----------------------------
T ss_pred --cCCCCCCCCCCCC-c-ccCCCCCCCCCCCcccCC
Confidence 2445555555552 1 223334445689999997
No 20
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.63 E-value=1.1e-15 Score=128.67 Aligned_cols=90 Identities=63% Similarity=0.993 Sum_probs=77.8
Q ss_pred ccceEEEeccCccccccccC-------------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCC
Q 041209 179 VQDLLLLDVTPLSLGIETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPA 233 (412)
Q Consensus 179 ~~~~~~~dv~~~s~gi~~~~-------------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~ 233 (412)
++++.+.|++|++|||++.+ |+|+.+.|.||||++..+.+|..||+|.+.|+|+.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 56889999999999999865 88999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEecCceeEEEEEEeccCC----ceeecC
Q 041209 234 PRGVPQINVCFDIDANGILHVSAKDKTAG----ITITND 268 (412)
Q Consensus 234 ~~g~~~i~v~f~id~~g~l~v~a~~~~t~----i~i~~~ 268 (412)
|+|.++|+|+|++|.||+|+|++.++.++ ++|++.
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS 132 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence 99999999999999999999999999988 666654
No 21
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.59 E-value=1.2e-15 Score=126.09 Aligned_cols=108 Identities=42% Similarity=0.731 Sum_probs=73.8
Q ss_pred HHHHHHHHhhHHHHHHhhhhhcchhhhhcCCCHHhHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHH
Q 041209 294 IKKKVEAKNSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLVEVDELEDKLKELKGFCNPIIAKMY 373 (412)
Q Consensus 294 ~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~ 373 (412)
.+++.++||.||+|||.++..|.++.+...+++++++.|...++++.+||+++.+++.++|+.++++|++.+.+|..|++
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y 92 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 92 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45578999999999999999997645778899999999999999999999876667999999999999999999999998
Q ss_pred hcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCC
Q 041209 374 EGGASGDVPMGGGAEMPGGGHGKAETGGASGGPKIEEVD 412 (412)
Q Consensus 374 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (412)
..+ ++ +||+ ||+ .++++++.||+|+|||
T Consensus 93 ~~~--~~----~~~~-~~~----~~~~~~~~~~~~ee~d 120 (120)
T 2p32_A 93 QSA--GG----APPG-AAP----GGAAGGAGGPTIEEVD 120 (120)
T ss_dssp CC-------------------------------------
T ss_pred Hhc--cC----CCCC-CCC----CCCCCCCCCCCCCCCC
Confidence 432 12 2322 211 1122334589999997
No 22
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.49 E-value=2.7e-14 Score=142.92 Aligned_cols=160 Identities=16% Similarity=0.217 Sum_probs=110.9
Q ss_pred cccchhHHHHHHhcccCCCCC--------------------eEEEecCCCCCchHHHHHHHHHHHH------HHHHhhcc
Q 041209 2 RIINEPTAAAIAYGLDNKASR--------------------TVKATAGDTHLGGEDFDNRLVNHFV------AEFKRKHK 55 (412)
Q Consensus 2 ~li~EPtAAAl~y~~~~~~~~--------------------~Vla~~gd~~lGG~d~D~~l~~~~~------~~~~~~~~ 55 (412)
+|++||+|||++|......+. .+. ..++..+||++||+.|+.++. ++++.+++
T Consensus 186 ~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~-~~~~i~~GG~~it~dIa~~l~~~~~~AE~iK~~~g 264 (419)
T 4a2a_A 186 QLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPI-KISYVPVGMKHVIKDVSAVLDTSFEESERLIITHG 264 (419)
T ss_dssp EEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEE-EEEEESCCHHHHHHHHHHHHTCCHHHHHHHHHHHC
T ss_pred EEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEE-EEEecccHHHHHHHHHHHHHCCCHHHHHHHHHHhc
Confidence 589999999999864322110 333 334689999999999987652 12222222
Q ss_pred CCCcccHHHHHHhhcceEEeeecccCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCC------CCccceEEEec
Q 041209 56 KDISGNARALRRLQTTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKID------KSQVHDVVLVG 129 (412)
Q Consensus 56 ~~~~~~~~~~~~l~~~~i~i~~~~~~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~------~~~id~V~LvG 129 (412)
...... -....+.++.... ....+++|++|+++++|.++++...+++.|+.++.+ ...++.|+|+|
T Consensus 265 ~a~~~~------~~~~~i~v~~~~~--~~~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtG 336 (419)
T 4a2a_A 265 NAVYND------LKEEEIQYRGLDG--NTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTG 336 (419)
T ss_dssp CSCCTT------CCCCEEEEECTTS--CSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEES
T ss_pred cCcccC------CCCceEEEeecCC--ccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEEC
Confidence 111000 0013355554432 456799999999999999999999999999999873 45688999999
Q ss_pred CCcCcHHHHHHHHHhhCCCccccc-----------------CCCchhHHhHHHHHHHHH
Q 041209 130 GSTRIPKVQQLLQDFFNGKELCKS-----------------INPDEAVAYGAAVQAAIL 171 (412)
Q Consensus 130 GssriP~V~~~l~~~f~~~~~~~~-----------------~~pd~aVA~GAa~~a~~l 171 (412)
|+|+||.|++.+++.| +.++... -+|..++|.|.++++...
T Consensus 337 G~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 337 GGAKIPRINELATEVF-KSPVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp GGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBTCHHHHTCGGGHHHHHTTCC----
T ss_pred chhchhhHHHHHHHHH-CCCeEEEecCCCCchhccCcccccCCchHHHHHHHHHHHhhc
Confidence 9999999999999999 5544321 388999999999988654
No 23
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.42 E-value=5.3e-13 Score=125.64 Aligned_cols=134 Identities=20% Similarity=0.311 Sum_probs=105.3
Q ss_pred cccchhHHHHHHhcccCCC--C----C---------eEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCcccHHHHH
Q 041209 2 RIINEPTAAAIAYGLDNKA--S----R---------TVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARALR 66 (412)
Q Consensus 2 ~li~EPtAAAl~y~~~~~~--~----~---------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~ 66 (412)
.++.||+|+|++|+..... + . .++. .+...+||.+||+.|.+++. .+ .....
T Consensus 124 ~i~~e~~A~a~~~~~~~~~viDiGggst~~~~~~~g~~~~-~~~~~~Gg~~~~~~l~~~l~--------~~----~~~ae 190 (272)
T 3h1q_A 124 TLVDEPVAAARALGINDGIVVDIGGGTTGIAVIEKGKITA-TFDEPTGGTHLSLVLAGSYK--------IP----FEEAE 190 (272)
T ss_dssp EEECHHHHHHHHHTCSSEEEEEECSSCEEEEEEETTEEEE-ECCBSCCHHHHHHHHHHHHT--------CC----HHHHH
T ss_pred ecccHHHHHHHHHcCCCEEEEEECCCcEEEEEEECCEEEE-EecCCCcHHHHHHHHHHHhC--------CC----HHHHH
Confidence 4789999999999865421 0 1 3333 35689999999999988763 11 22333
Q ss_pred HhhcceEEeeecccCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhC
Q 041209 67 RLQTTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFN 146 (412)
Q Consensus 67 ~l~~~~i~i~~~~~~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~ 146 (412)
+++... . ++++|++++.++++++...+.+.++..+ +++.|+|+||+|++|.+++.+++.|
T Consensus 191 ~~k~~~-------~--------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l- 250 (272)
T 3h1q_A 191 TIKKDF-------S--------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL- 250 (272)
T ss_dssp HHHHSS-------T--------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH-
T ss_pred HHHHhc-------C--------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh-
Confidence 333210 0 7999999999999999999999998764 4789999999999999999999999
Q ss_pred CCcccccCCCchhHHhHHHHHH
Q 041209 147 GKELCKSINPDEAVAYGAAVQA 168 (412)
Q Consensus 147 ~~~~~~~~~pd~aVA~GAa~~a 168 (412)
+.++..+.||++++|+|||++|
T Consensus 251 ~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SSCCBCCSSGGGHHHHHHHTTC
T ss_pred CCCccccCChHHHHHHHHHhcC
Confidence 7788888999999999999864
No 24
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.41 E-value=3e-13 Score=132.13 Aligned_cols=150 Identities=15% Similarity=0.108 Sum_probs=105.6
Q ss_pred CcccchhHHHHHHh--cccCCC-CC--------------e---------EEEecCCCCCchHHHHHHHHHHHHHHHHhhc
Q 041209 1 MRIINEPTAAAIAY--GLDNKA-SR--------------T---------VKATAGDTHLGGEDFDNRLVNHFVAEFKRKH 54 (412)
Q Consensus 1 v~li~EPtAAAl~y--~~~~~~-~~--------------~---------Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~ 54 (412)
+++++||+|||++| ...... +. . |.++.++..+||++||+.|++++.++|....
T Consensus 166 v~li~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~~~ 245 (346)
T 2fsj_A 166 LIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKETGFVV 245 (346)
T ss_dssp EEEEETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHHHCCCC
T ss_pred EEEEccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHHhCCCc
Confidence 46899999999988 211111 11 2 2233466789999999999988877664200
Q ss_pred cCCCcccHHHHHHhhcceEEeeecccCceeEEEEeHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcC
Q 041209 55 KKDISGNARALRRLQTTTIEIDSLYEGIDFYATITRARF-EELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTR 133 (412)
Q Consensus 55 ~~~~~~~~~~~~~l~~~~i~i~~~~~~~~~~~~itr~ef-e~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssr 133 (412)
.+. .+... ....+.+ .+. .+++++| +++++++++++.+.++++|+++ .++++.|+|+||+|+
T Consensus 246 --~i~--~~~~e--~~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~IvL~GGga~ 308 (346)
T 2fsj_A 246 --PFD--LAQEA--LSHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLIPVGGGSN 308 (346)
T ss_dssp --CHH--HHHHH--TTSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEEEESTTHH
T ss_pred --CCC--HHHHh--cCCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEEEECCcHH
Confidence 222 11111 1122222 232 3569999 9999999999999999999886 567899999999999
Q ss_pred cHHHHHHHHHhhCCCcc-cccCCCchhHHhHHHHHHH
Q 041209 134 IPKVQQLLQDFFNGKEL-CKSINPDEAVAYGAAVQAA 169 (412)
Q Consensus 134 iP~V~~~l~~~f~~~~~-~~~~~pd~aVA~GAa~~a~ 169 (412)
+ +++.|++.|+...+ ....||++|+|+|+..++.
T Consensus 309 l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 309 L--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp H--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred H--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 9 99999999953221 1256999999999998764
No 25
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.35 E-value=5.9e-13 Score=131.33 Aligned_cols=143 Identities=17% Similarity=0.208 Sum_probs=87.5
Q ss_pred cccchhHHHHHHhcccCCC--CC--------------------eEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCc
Q 041209 2 RIINEPTAAAIAYGLDNKA--SR--------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDIS 59 (412)
Q Consensus 2 ~li~EPtAAAl~y~~~~~~--~~--------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~ 59 (412)
++++||+|||++|+..... +. .+. ..++..+||++||+.|++.+ +.+.
T Consensus 169 ~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~-~~~~~~~GG~~i~~~i~~~~--------~~~~- 238 (377)
T 2ych_A 169 VLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPL-AVRVLTLSGKDFTEAIARSF--------NLDL- 238 (377)
T ss_dssp EEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEE-EEEEESCSHHHHHHHHHHHT--------TCCH-
T ss_pred EEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEE-EEEeeechHHHHHHHHHHHh--------CCCH-
Confidence 5899999999998643211 11 333 34568899999999998732 2221
Q ss_pred ccHHHHHHhhc--ceE-----EeeecccCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCCCccceEEEecC
Q 041209 60 GNARALRRLQT--TTI-----EIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRD--SKIDKSQVHDVVLVGG 130 (412)
Q Consensus 60 ~~~~~~~~l~~--~~i-----~i~~~~~~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~--a~~~~~~id~V~LvGG 130 (412)
....+++. ... .....+.-......++|++|+++++|.++++...++++|+. ++.....++.|+|+||
T Consensus 239 ---~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG 315 (377)
T 2ych_A 239 ---LAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGG 315 (377)
T ss_dssp ---HHHHHHHHHTC-------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESG
T ss_pred ---HHHHHHHhhcccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECc
Confidence 12222222 000 00000010123457899999999999999999999999985 4566678999999999
Q ss_pred CcCcHHHHHHHHHhhCCCcccccCCCchh
Q 041209 131 STRIPKVQQLLQDFFNGKELCKSINPDEA 159 (412)
Q Consensus 131 ssriP~V~~~l~~~f~~~~~~~~~~pd~a 159 (412)
+|++|.+++.+++.| +.++... ||+++
T Consensus 316 ~s~~p~l~~~l~~~l-~~~v~~~-~P~~~ 342 (377)
T 2ych_A 316 GSKLRGLASLLTDTL-GVNLEPV-NPWEA 342 (377)
T ss_dssp GGGSTTHHHHHHHHH-TSEEEEC-CGGGG
T ss_pred cccchhHHHHHHHHh-CCCeEec-Cchhh
Confidence 999999999999999 5554433 55443
No 26
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.29 E-value=2.2e-12 Score=124.56 Aligned_cols=152 Identities=13% Similarity=0.132 Sum_probs=100.5
Q ss_pred CcccchhHHHHHHhcccCCCCC----------------------eEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCC
Q 041209 1 MRIINEPTAAAIAYGLDNKASR----------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDI 58 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~~~~----------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~ 58 (412)
+++++||+|||++|......+. .+.++.++..+||.+||+.|++++.++ +.++
T Consensus 143 v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~i 217 (320)
T 2zgy_A 143 VKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTKG 217 (320)
T ss_dssp EEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBGG
T ss_pred EEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCCC
Confidence 4679999999999874322221 356667888999999999999988642 2333
Q ss_pred cccHHHHHHh-hcceEEeeecccCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHH
Q 041209 59 SGNARALRRL-QTTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKV 137 (412)
Q Consensus 59 ~~~~~~~~~l-~~~~i~i~~~~~~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V 137 (412)
. .....++ +...... +....+...-+++++.+++++.++++...+.+.+++. .+++.|+|+||+|++ +
T Consensus 218 ~--~~~ae~~lk~~~~~~---~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~vvl~GGga~l--l 286 (320)
T 2zgy_A 218 S--SYLADDIIIHRKDNN---YLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHVMVIGGGAEL--I 286 (320)
T ss_dssp G--HHHHHHHHHTTTCHH---HHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEEEEESTTHHH--H
T ss_pred C--HHHHHHHHHHhhhhh---cccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeEEEECChHHH--H
Confidence 2 2222223 3321100 0000000011455666667777766666666666552 568999999999998 9
Q ss_pred HHHHHHhhCCC--cccccCCCchhHHhHHHHHH
Q 041209 138 QQLLQDFFNGK--ELCKSINPDEAVAYGAAVQA 168 (412)
Q Consensus 138 ~~~l~~~f~~~--~~~~~~~pd~aVA~GAa~~a 168 (412)
++.|++.|+.. ++....||++|+|+||+++|
T Consensus 287 ~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 287 CDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 99999999432 56778899999999999876
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.25 E-value=2.2e-12 Score=121.91 Aligned_cols=158 Identities=15% Similarity=0.128 Sum_probs=100.7
Q ss_pred CcccchhHHHHHHhcccCCCCC---------------------eEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCc
Q 041209 1 MRIINEPTAAAIAYGLDNKASR---------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDIS 59 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~~~~---------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~ 59 (412)
++.||||+|+|+++....+... ++...+++...||.+|+..+++++.-.|...
T Consensus 74 ~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~~------ 147 (276)
T 4ehu_A 74 DKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSEL------ 147 (276)
T ss_dssp SEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECTTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGGH------
T ss_pred CcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEecCceEEEEeCCCcCcchhhHHHHHHHHhccChhhh------
Confidence 3679999999998876555321 5667888999999999999988874433211
Q ss_pred ccHHHHHHhhcceEEeeeccc---Ccee-EEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcH
Q 041209 60 GNARALRRLQTTTIEIDSLYE---GIDF-YATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIP 135 (412)
Q Consensus 60 ~~~~~~~~l~~~~i~i~~~~~---~~~~-~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP 135 (412)
+.. .+.-+....+..... ..++ ...-.....++++..+.+.+...+....... ..++.|+|+||++++|
T Consensus 148 --~~~-~~~a~~~~~i~~~~~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~ 220 (276)
T 4ehu_A 148 --GSI-SMNSQNEVSISSTCTVFAESEVISHLSENAKIEDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNS 220 (276)
T ss_dssp --HHH-HTTCSSCCCCCCCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCH
T ss_pred --HHH-HhcCCCCCCcCCccchhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchH
Confidence 111 111010011110000 0000 0000001134556666666555554443332 3467899999999999
Q ss_pred HHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHh
Q 041209 136 KVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 172 (412)
Q Consensus 136 ~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~ 172 (412)
.||+.+++.| +.++..+.||++++|+|||++|....
T Consensus 221 ~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 221 GIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 9999999999 78899999999999999999997654
No 28
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.17 E-value=1.5e-11 Score=121.28 Aligned_cols=163 Identities=17% Similarity=0.169 Sum_probs=104.8
Q ss_pred CcccchhHHHHHHhcccCCC------CC---------eEEE-ecCCCCCchHHHHHHHHHHHHHHHHhhccCCCcccHHH
Q 041209 1 MRIINEPTAAAIAYGLDNKA------SR---------TVKA-TAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARA 64 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~~------~~---------~Vla-~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~ 64 (412)
+.+++||+|||++|+..... .. .++. ..+...+||++||+.|.+++..+. +..........
T Consensus 132 ~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~~~~ 208 (375)
T 2fxu_A 132 MYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERG---YSFVTTAEREI 208 (375)
T ss_dssp EEEEEHHHHHHHHTTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHT---CCCCSHHHHHH
T ss_pred EEEccchheeeeecCCCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcC---CCCCcHHHHHH
Confidence 36899999999999864321 11 1221 234578999999999999997651 11111112233
Q ss_pred HHHhhc--c-------------------eEEeeecccCceeEEEEeHHHHH---HHHHHH-----HHHHHHHHHHHHhhc
Q 041209 65 LRRLQT--T-------------------TIEIDSLYEGIDFYATITRARFE---ELNMDL-----FRKCMEPVEKCLRDS 115 (412)
Q Consensus 65 ~~~l~~--~-------------------~i~i~~~~~~~~~~~~itr~efe---~~~~~~-----~~~~~~~i~~~l~~a 115 (412)
.++++. . ....+ +.++ ..++|+++.|. .+.+|. ...+..+|.++|..+
T Consensus 209 ~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~-lpdg--~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~ 285 (375)
T 2fxu_A 209 VRDIKEKLCYVALDFENEMATAASSSSLEKSYE-LPDG--QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKC 285 (375)
T ss_dssp HHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE-CTTS--CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTS
T ss_pred HHHHHHHHHhhcccHHHHHHhhcccCccCeEEE-CCCC--CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhC
Confidence 333333 0 01111 1122 34788998883 333442 234667777777765
Q ss_pred --CCCCCccceEEEecCCcCcHHHHHHHHHhhCC-------CcccccCCCchhHHhHHHHHHH
Q 041209 116 --KIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNG-------KELCKSINPDEAVAYGAAVQAA 169 (412)
Q Consensus 116 --~~~~~~id~V~LvGGssriP~V~~~l~~~f~~-------~~~~~~~~pd~aVA~GAa~~a~ 169 (412)
.+.+..++.|+|+||+|++|.+++.|.+.+.. .++....+|..+|++||+++|.
T Consensus 286 ~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 286 DIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp CHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred CHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 23344568899999999999999999988731 3344567999999999999997
No 29
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.16 E-value=1.4e-11 Score=123.33 Aligned_cols=167 Identities=14% Similarity=0.167 Sum_probs=107.1
Q ss_pred CcccchhHHHHHH-hc---ccCCCCC--------------------eEEEecCCCCCchHHHHHHHHHHHHHHHHhhccC
Q 041209 1 MRIINEPTAAAIA-YG---LDNKASR--------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKK 56 (412)
Q Consensus 1 v~li~EPtAAAl~-y~---~~~~~~~--------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~ 56 (412)
+.+++||+|||++ |. ....... .+....++..+||++||+.|.+++..++. ..
T Consensus 139 ~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~---~~ 215 (418)
T 1k8k_A 139 LYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREV---GI 215 (418)
T ss_dssp EEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCC---CC
T ss_pred EEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCC---CC
Confidence 3689999999987 42 1111001 11122246789999999999999875431 11
Q ss_pred CCcccHHHHHHhhc------------------------ceEEeeecccCceeEEEEeHHHH---HHHHHHHH------HH
Q 041209 57 DISGNARALRRLQT------------------------TTIEIDSLYEGIDFYATITRARF---EELNMDLF------RK 103 (412)
Q Consensus 57 ~~~~~~~~~~~l~~------------------------~~i~i~~~~~~~~~~~~itr~ef---e~~~~~~~------~~ 103 (412)
.........++++. ..+.++....+.+..++|+++.| |.+++|.+ ..
T Consensus 216 ~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~ 295 (418)
T 1k8k_A 216 PPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQP 295 (418)
T ss_dssp CGGGHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCC
T ss_pred CCHHHHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCC
Confidence 11122233333333 12333333344566889999999 44544432 45
Q ss_pred HHHHHHHHHhhcC--CCCCccceEEEecCCcCcHHHHHHHHHhhCC-----------------------CcccccCCCch
Q 041209 104 CMEPVEKCLRDSK--IDKSQVHDVVLVGGSTRIPKVQQLLQDFFNG-----------------------KELCKSINPDE 158 (412)
Q Consensus 104 ~~~~i~~~l~~a~--~~~~~id~V~LvGGssriP~V~~~l~~~f~~-----------------------~~~~~~~~pd~ 158 (412)
+..+|.++|..+. +.++.++.|+|+||+|++|.+++.|++.|.. ..+..+.+|..
T Consensus 296 i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~ 375 (418)
T 1k8k_A 296 ISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRY 375 (418)
T ss_dssp HHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCcccc
Confidence 7778888887653 5566788999999999999999999876521 12233457789
Q ss_pred hHHhHHHHHHHH
Q 041209 159 AVAYGAAVQAAI 170 (412)
Q Consensus 159 aVA~GAa~~a~~ 170 (412)
++.+||+++|..
T Consensus 376 ~~w~Ggsilasl 387 (418)
T 1k8k_A 376 AVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHTTS
T ss_pred ceeHhHHHHHcC
Confidence 999999999863
No 30
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.70 E-value=9.6e-09 Score=100.39 Aligned_cols=151 Identities=14% Similarity=0.225 Sum_probs=98.3
Q ss_pred CcccchhHHHHHHhcccCC-------CCC-------------------eEE-EecCCCCCchHHHHHHHHHHHHHHHHhh
Q 041209 1 MRIINEPTAAAIAYGLDNK-------ASR-------------------TVK-ATAGDTHLGGEDFDNRLVNHFVAEFKRK 53 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~-------~~~-------------------~Vl-a~~gd~~lGG~d~D~~l~~~~~~~~~~~ 53 (412)
|.+++||.||+++|..+.. ..+ .+. ...+...+||..+++.|.+++.+++.
T Consensus 157 V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~~~-- 234 (355)
T 3js6_A 157 VKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKKSE-- 234 (355)
T ss_dssp EEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC------
T ss_pred EEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHhcC--
Confidence 4689999999999976431 111 111 11223679999999999999988642
Q ss_pred ccCCCcccHHHHHHhhcceEEeeecccCce--eEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCC
Q 041209 54 HKKDISGNARALRRLQTTTIEIDSLYEGID--FYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS 131 (412)
Q Consensus 54 ~~~~~~~~~~~~~~l~~~~i~i~~~~~~~~--~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs 131 (412)
+..+. ..++.+- .. ....+.+ -.+.++ +.++++++++++++.+.+++.+.+ ++.++.|+|+||+
T Consensus 235 -g~~l~--~~~i~~g---~~---~~~~~~~~~k~~di~-~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGG 300 (355)
T 3js6_A 235 -GASIT--PRMIEKG---LE---YKQCKLNQKTVIDFK-DEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGG 300 (355)
T ss_dssp -----C--HHHHHSC---CC----------------CH-HHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTT
T ss_pred -CCcCC--HHHHhcC---Cc---cccccccccccccHH-HHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcc
Confidence 22232 2222221 11 0001110 112333 367788888899988888888864 4668999999999
Q ss_pred cCcHH--HHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHh
Q 041209 132 TRIPK--VQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 172 (412)
Q Consensus 132 sriP~--V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~ 172 (412)
+.++. +.+.|++.|+.. .||..|+|+|+..++..+.
T Consensus 301 a~l~~~~l~~~i~~~~~~~-----~~p~~anA~G~~~~~~~~~ 338 (355)
T 3js6_A 301 ANIHFDSLSHYYSDVFEKA-----DDSQFSNVRGYEKLGELLK 338 (355)
T ss_dssp HHHHHHHHHHHSSSCEECC-----SSGGGHHHHHHHHHHHHHH
T ss_pred hhcchhhHHHHHHHHCCCC-----CCcHHHHHHHHHHHHHHHH
Confidence 99998 999999998432 7999999999999998775
No 31
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=98.52 E-value=5.2e-08 Score=96.58 Aligned_cols=164 Identities=18% Similarity=0.199 Sum_probs=68.9
Q ss_pred CcccchhHHHHHHhcccCCC--C----C---------eEEEe-cCCCCCchHHHHHHHHHHHHHHHHhhccCCCcccHHH
Q 041209 1 MRIINEPTAAAIAYGLDNKA--S----R---------TVKAT-AGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARA 64 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~~--~----~---------~Vla~-~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~ 64 (412)
+.+++||+|||++++..... + . .++.. .....+||+++|+.|.+++..+. +..........
T Consensus 136 ~~~~~~~~~a~~a~g~~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~~~~ 212 (394)
T 1k8k_B 136 VYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRG---YAFNHSADFET 212 (394)
T ss_dssp ------------------CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTT---CCCCTTTTHHH
T ss_pred EEEEhhHHHHHHhCCCceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcC---CCCCcHHHHHH
Confidence 46889999999999864332 1 1 22221 12458999999999999987641 11111122333
Q ss_pred HHHhhc--ceEE-----------------ee-ecccCceeEEEEeHHHHHHHHHHHH---------HHHHHHHHHHHhhc
Q 041209 65 LRRLQT--TTIE-----------------ID-SLYEGIDFYATITRARFEELNMDLF---------RKCMEPVEKCLRDS 115 (412)
Q Consensus 65 ~~~l~~--~~i~-----------------i~-~~~~~~~~~~~itr~efe~~~~~~~---------~~~~~~i~~~l~~a 115 (412)
.++++. ..+. .. .+.++ ..++|+++.|. +.+.++ ..+...|.++|..+
T Consensus 213 ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lpdg--~~i~i~~erf~-~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~ 289 (394)
T 1k8k_B 213 VRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDG--RIIKVGGERFE-APEALFQPHLINVEGVGVAELLFNTIQAA 289 (394)
T ss_dssp HHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTTS--CEEEECTHHHH-TGGGGTCGGGGTCCSCCHHHHHHHHHHHS
T ss_pred HHHHHHhheeEecCHHHHHHhhccCCcCceEEECCCC--CEEEECchhhc-ChHhhCCchhccCCCCCHHHHHHHHHHhC
Confidence 344433 1000 00 11222 24678888773 223232 23556677777766
Q ss_pred C--CCCCccceEEEecCCcCcHHHHHHHHHhhCC------------------CcccccCCCchhHHhHHHHHHHH
Q 041209 116 K--IDKSQVHDVVLVGGSTRIPKVQQLLQDFFNG------------------KELCKSINPDEAVAYGAAVQAAI 170 (412)
Q Consensus 116 ~--~~~~~id~V~LvGGssriP~V~~~l~~~f~~------------------~~~~~~~~pd~aVA~GAa~~a~~ 170 (412)
. +.++-++.|+|+||+|++|.+.+.|.+.+.. ..+....+|..++.+|++++|..
T Consensus 290 ~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 290 DIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp CTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred CHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 3 2334467899999999999999999887621 11223557789999999999864
No 32
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.37 E-value=6.9e-08 Score=93.35 Aligned_cols=155 Identities=12% Similarity=0.140 Sum_probs=101.2
Q ss_pred CcccchhHHHHHHhcccCCCCC-------------------eEE-EecCCCCCchHHHHHHHHHHHHHHHHhhccCCCcc
Q 041209 1 MRIINEPTAAAIAYGLDNKASR-------------------TVK-ATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISG 60 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~~~~-------------------~Vl-a~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~ 60 (412)
+.+++||.+|.+.+........ .+. +..+...+||.++++.|.+++.. .+++..+..
T Consensus 152 v~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~ 228 (329)
T 4apw_A 152 ITIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN 228 (329)
T ss_dssp EEEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS
T ss_pred EEEEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH
Confidence 3578899998876521111111 221 12335679999999999988765 034443332
Q ss_pred cHHHHHHhhcceEEeeecccCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHH
Q 041209 61 NARALRRLQTTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140 (412)
Q Consensus 61 ~~~~~~~l~~~~i~i~~~~~~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~ 140 (412)
. ...+++.... ...+.++ ..++.++++++++++++++.+.+++. +.+++.++.|+|+||++.+ +.+.
T Consensus 229 ~--~~e~i~~~g~----~~~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~ 295 (329)
T 4apw_A 229 E--QAESALNNGY----MKKGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQ 295 (329)
T ss_dssp B--TTTTCSSSCS----SCEECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHH
T ss_pred H--HHHHHHhcCC----cccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHH
Confidence 1 2222222100 0011111 13567888888888888888877766 3556668999999999998 6799
Q ss_pred HHHhhCCCcccccCCCchhHHhHHHHHHHHHh
Q 041209 141 LQDFFNGKELCKSINPDEAVAYGAAVQAAILS 172 (412)
Q Consensus 141 l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~ 172 (412)
|++.| +.++....||..|+|+|+..++....
T Consensus 296 l~~~~-~~~v~v~~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 296 ISKTY-PNNSIITNNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp HHHHS-TTCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHc-CCCCEecCCChhhHHHHHHHHHhhhh
Confidence 99999 44566778999999999999887654
No 33
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.11 E-value=0.00047 Score=68.72 Aligned_cols=168 Identities=18% Similarity=0.146 Sum_probs=87.8
Q ss_pred cccchhHHHHHHhcccCC-----CCCeEEEecC-------------------CCCCchHHHHHHHHHHHHHHHH------
Q 041209 2 RIINEPTAAAIAYGLDNK-----ASRTVKATAG-------------------DTHLGGEDFDNRLVNHFVAEFK------ 51 (412)
Q Consensus 2 ~li~EPtAAAl~y~~~~~-----~~~~Vla~~g-------------------d~~lGG~d~D~~l~~~~~~~~~------ 51 (412)
-++.+|.+|+++++.... ...-|+..++ ...+||+++|+.|.+++..++.
T Consensus 156 ~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~~~~~~ 235 (427)
T 3dwl_A 156 YIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLK 235 (427)
T ss_dssp EEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC--------CH
T ss_pred eecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCCchhHH
Confidence 468899999998885321 1111111111 2479999999999987765432
Q ss_pred ------hhccCCCcccHHHHHHhhcceEEee--ec--ccCceeEEEEeHHHHH---HHHHHH------HHHHHHHHHHHH
Q 041209 52 ------RKHKKDISGNARALRRLQTTTIEID--SL--YEGIDFYATITRARFE---ELNMDL------FRKCMEPVEKCL 112 (412)
Q Consensus 52 ------~~~~~~~~~~~~~~~~l~~~~i~i~--~~--~~~~~~~~~itr~efe---~~~~~~------~~~~~~~i~~~l 112 (412)
+++..-...-.+.+.+.......+. .+ .++....++|+.+.|. -+.+|- ...+..++.++|
T Consensus 236 ~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI 315 (427)
T 3dwl_A 236 TAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVV 315 (427)
T ss_dssp HHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHH
T ss_pred HHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHH
Confidence 2222111110111111110000000 11 2333446777777762 233331 123556677777
Q ss_pred hhcCC--CCCccceEEEecCCcCcHHHHHHHHHhhC-------------------C--CcccccCCCchhHHhHHHHHHH
Q 041209 113 RDSKI--DKSQVHDVVLVGGSTRIPKVQQLLQDFFN-------------------G--KELCKSINPDEAVAYGAAVQAA 169 (412)
Q Consensus 113 ~~a~~--~~~~id~V~LvGGssriP~V~~~l~~~f~-------------------~--~~~~~~~~pd~aVA~GAa~~a~ 169 (412)
.++.. .++-...|+|+||+|.+|.+.+.|.+.+. . .++..+.++..++=+|++++|.
T Consensus 316 ~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 316 QSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 65432 12224569999999999999998887541 1 1233445677999999999985
No 34
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.08 E-value=0.0014 Score=61.16 Aligned_cols=73 Identities=26% Similarity=0.237 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHh
Q 041209 95 ELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 172 (412)
Q Consensus 95 ~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~ 172 (412)
+++..+++.+..-+..+++..++ .+.|+++||.++.|.+++.+.+.+ +.++..+.++..+.|+|||++|....
T Consensus 186 di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~~ 258 (270)
T 1hux_A 186 DIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKKA 258 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHhh
Confidence 33444444444444444443321 367999999999999999999999 77887777788899999999997653
No 35
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=96.90 E-value=0.00067 Score=68.22 Aligned_cols=81 Identities=30% Similarity=0.304 Sum_probs=55.4
Q ss_pred EEeHHH--HHHHHHHHHHHHHHH--HHHHHhhcCC-----CCCccceEEEecCCcCcHHHHHHHHHhhCCCcc-------
Q 041209 87 TITRAR--FEELNMDLFRKCMEP--VEKCLRDSKI-----DKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKEL------- 150 (412)
Q Consensus 87 ~itr~e--fe~~~~~~~~~~~~~--i~~~l~~a~~-----~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~------- 150 (412)
.| +.. +|+ ++-+-+++.+. +...|+.++. +..+|..|+|+||+|.+|-+.++.++.|+.-++
T Consensus 507 ~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiGrP~~ 584 (610)
T 2d0o_A 507 PL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNI 584 (610)
T ss_dssp EC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEEECCG
T ss_pred ee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCc
Confidence 55 556 666 55555554443 2333444322 345779999999999999999999999943021
Q ss_pred cccCCCchhHHhHHHHHHH
Q 041209 151 CKSINPDEAVAYGAAVQAA 169 (412)
Q Consensus 151 ~~~~~pd~aVA~GAa~~a~ 169 (412)
...-.|..|+|.|..+|..
T Consensus 585 ~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 585 RGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp GGTSTTSCHHHHHHHHHHH
T ss_pred cccCCCcHHHHHHHHHHHh
Confidence 1234899999999998754
No 36
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.89 E-value=0.0022 Score=66.06 Aligned_cols=82 Identities=15% Similarity=0.205 Sum_probs=59.3
Q ss_pred EEeHHHHHHHHHHHHHHHHHHHHHH---HhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhH
Q 041209 87 TITRARFEELNMDLFRKCMEPVEKC---LRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYG 163 (412)
Q Consensus 87 ~itr~efe~~~~~~~~~~~~~i~~~---l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~G 163 (412)
.-||.++-.++.-+++.+.--++.+ |++.+. .++.|.++||.++.|++.+.+.+.| +.++... ...++.|+|
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alG 482 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGY---NIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLG 482 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHH
Confidence 3478887443444444444333333 344443 4788999999999999999999999 7777654 567899999
Q ss_pred HHHHHHHHhC
Q 041209 164 AAVQAAILSG 173 (412)
Q Consensus 164 Aa~~a~~l~~ 173 (412)
||+.|+.-.+
T Consensus 483 AA~lA~~a~G 492 (554)
T 3l0q_A 483 SAMMGTVAAG 492 (554)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999988664
No 37
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.77 E-value=0.0033 Score=64.45 Aligned_cols=76 Identities=13% Similarity=0.092 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHh
Q 041209 95 ELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 172 (412)
Q Consensus 95 ~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~ 172 (412)
.+++-+++.+.-.++.+++..+.....++.|.++||.++.|++.+++.+.| +.++... .+.++.|+|||+.|+.-.
T Consensus 408 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 408 VEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHh
Confidence 334445555544445555544433345788999999999999999999999 7777654 668899999999998765
No 38
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.68 E-value=0.0033 Score=63.56 Aligned_cols=80 Identities=23% Similarity=0.242 Sum_probs=55.4
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHH
Q 041209 89 TRARFEEL-NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 167 (412)
Q Consensus 89 tr~efe~~-~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~ 167 (412)
+|.++-.. ++.+.-.+...++. |++.+. .++.|.++||.++.|++.+.+.+.| +.++.....++.+.|+|||+.
T Consensus 357 ~~~~~~rAvlEgia~~~~~~~~~-l~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~l 431 (484)
T 2itm_A 357 GPNELARAVLEGVGYALADGMDV-VHACGI---KPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARL 431 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-HHTTTC---CCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH-HHHcCC---CcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHH
Confidence 56555332 23343333333333 333343 3678999999999999999999999 788877655555699999999
Q ss_pred HHHHhC
Q 041209 168 AAILSG 173 (412)
Q Consensus 168 a~~l~~ 173 (412)
|+.-.+
T Consensus 432 A~~~~g 437 (484)
T 2itm_A 432 AQIAAN 437 (484)
T ss_dssp HHHHHC
T ss_pred HHHHcC
Confidence 987663
No 39
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.66 E-value=0.0038 Score=63.48 Aligned_cols=79 Identities=13% Similarity=0.128 Sum_probs=56.0
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHH
Q 041209 89 TRARFEEL-NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 167 (412)
Q Consensus 89 tr~efe~~-~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~ 167 (412)
||.+|-.+ ++.+.-.+...++ .|++.+. .++.|.++||.++.|++.+.+.+.| +.++... .+.++.|+|||+.
T Consensus 364 ~~~~l~RAvlEgia~~~r~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 437 (504)
T 3ll3_A 364 QKPEMARAVIEGIIFNLYDAAS-NLIKNTK---KPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFL 437 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHH
Confidence 56665433 2333333333333 3344443 4789999999999999999999999 7777654 5678999999999
Q ss_pred HHHHhC
Q 041209 168 AAILSG 173 (412)
Q Consensus 168 a~~l~~ 173 (412)
|+.-.+
T Consensus 438 A~~a~G 443 (504)
T 3ll3_A 438 ARQALG 443 (504)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 987664
No 40
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=96.66 E-value=0.00096 Score=67.31 Aligned_cols=80 Identities=28% Similarity=0.330 Sum_probs=55.8
Q ss_pred EEeHHH--HHHHHHHHHHHHHHH--HHHHHhhcCC-----CCCccceEEEecCCcCcHHHHHHHHHhhCC------Ccc-
Q 041209 87 TITRAR--FEELNMDLFRKCMEP--VEKCLRDSKI-----DKSQVHDVVLVGGSTRIPKVQQLLQDFFNG------KEL- 150 (412)
Q Consensus 87 ~itr~e--fe~~~~~~~~~~~~~--i~~~l~~a~~-----~~~~id~V~LvGGssriP~V~~~l~~~f~~------~~~- 150 (412)
.| +.. +|+ ++-+-+++... +...|+.++. +..+|..|+|+||+|.+|-+.++.++.|+. .+.
T Consensus 509 ~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRiGrP~~ 586 (607)
T 1nbw_A 509 PI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNI 586 (607)
T ss_dssp EE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEEEECCG
T ss_pred ee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCc
Confidence 55 555 666 55555554443 4445666554 234679999999999999999999999943 111
Q ss_pred cccCCCchhHHhHHHHHH
Q 041209 151 CKSINPDEAVAYGAAVQA 168 (412)
Q Consensus 151 ~~~~~pd~aVA~GAa~~a 168 (412)
...-.|..|+|.|..+|.
T Consensus 587 ~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 587 RGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp GGTSCSCCHHHHHHHHHH
T ss_pred cccCCchHHHHHHHHHhh
Confidence 123489999999999864
No 41
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.66 E-value=0.0038 Score=63.32 Aligned_cols=79 Identities=16% Similarity=0.201 Sum_probs=55.4
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHH
Q 041209 89 TRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQA 168 (412)
Q Consensus 89 tr~efe~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a 168 (412)
+|.++- +-+++.+.-.++.+++...-.. .++.|.++||.++.|++.+.+.+.| +.++... .+.++.|+|||+.|
T Consensus 365 ~~~~l~---rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA 438 (497)
T 2zf5_O 365 GREHLA---RATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLA 438 (497)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHH
Confidence 555553 3344444444444443332222 4788999999999999999999999 7777655 55679999999999
Q ss_pred HHHhC
Q 041209 169 AILSG 173 (412)
Q Consensus 169 ~~l~~ 173 (412)
+.-.+
T Consensus 439 ~~~~g 443 (497)
T 2zf5_O 439 GLAVD 443 (497)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 87653
No 42
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.60 E-value=0.0035 Score=63.94 Aligned_cols=79 Identities=25% Similarity=0.381 Sum_probs=56.2
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHH
Q 041209 89 TRARFEEL-NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 167 (412)
Q Consensus 89 tr~efe~~-~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~ 167 (412)
||.++-.. ++.+.-.+...++ .|++.+. .++.|.++||.++.|++.+++.+.| +.++... .+.++.|+|||+.
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~l 468 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLGA---SITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAARQ 468 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHHHH
Confidence 56665442 3334334334333 3344454 3678999999999999999999999 7777654 5678999999999
Q ss_pred HHHHhC
Q 041209 168 AAILSG 173 (412)
Q Consensus 168 a~~l~~ 173 (412)
|+.-.+
T Consensus 469 A~~a~G 474 (515)
T 3i8b_A 469 AAWVLS 474 (515)
T ss_dssp HHHHHH
T ss_pred HHHHcC
Confidence 987654
No 43
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.59 E-value=0.0063 Score=62.20 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=58.4
Q ss_pred EeHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHH
Q 041209 88 ITRARFEEL-NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAV 166 (412)
Q Consensus 88 itr~efe~~-~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~ 166 (412)
-||.++-.+ ++.+.-.+...++.+-+.++.. ++.|.++||.++.|++.+.+.+.| +.++.+. ...|+.|+|||+
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~---~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~ 445 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGIR---LHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAY 445 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHH
Confidence 356665443 2333334444444443445654 678999999999999999999999 7787655 567899999999
Q ss_pred HHHHHhC
Q 041209 167 QAAILSG 173 (412)
Q Consensus 167 ~a~~l~~ 173 (412)
.|+.-.|
T Consensus 446 lA~~a~G 452 (526)
T 3ezw_A 446 LAGLAVG 452 (526)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 9998764
No 44
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.56 E-value=0.0045 Score=63.08 Aligned_cols=50 Identities=24% Similarity=0.217 Sum_probs=44.4
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhCCCcc-cccCCCchhHHhHHHHHHHHHhC
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFNGKEL-CKSINPDEAVAYGAAVQAAILSG 173 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~~~~~-~~~~~pd~aVA~GAa~~a~~l~~ 173 (412)
++.|.++||.++.|++.+.+.+.| +.++ .. ..+.++.|+|||+.|+.-.+
T Consensus 403 ~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~~e~~alGaA~lA~~a~G 453 (511)
T 3hz6_A 403 VGLLKVVGGGARSEAWLRMIADNL-NVSLLVK-PDAHLHPLRGLAALAAVELE 453 (511)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHH-TCEEEEC-CCGGGHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEe-cCCCCchHHHHHHHHHHHhC
Confidence 788999999999999999999999 7777 54 46899999999999987764
No 45
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.44 E-value=0.0052 Score=63.48 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=56.2
Q ss_pred eHHHHHHHH-HHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCc-CcHHHHHHHHHhhCCCcccccCCCchhHHhHHHH
Q 041209 89 TRARFEELN-MDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGST-RIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAV 166 (412)
Q Consensus 89 tr~efe~~~-~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGss-riP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~ 166 (412)
||.+|-.++ +.+.-.+...++ .|++.+. .++.|.++||.+ +.|++.+++.+.| +.++... .+.++.|+|||+
T Consensus 410 t~~~l~RAvlEgia~~~r~~~~-~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~ 483 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAIVD-AFHGRGV---EVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAM 483 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHH
Confidence 666654332 333333333333 3344443 478999999999 9999999999999 7777554 568999999999
Q ss_pred HHHHHhC
Q 041209 167 QAAILSG 173 (412)
Q Consensus 167 ~a~~l~~ 173 (412)
.|+.-.+
T Consensus 484 lA~~a~G 490 (572)
T 3jvp_A 484 FASVAAG 490 (572)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9998764
No 46
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.38 E-value=0.0053 Score=62.32 Aligned_cols=80 Identities=24% Similarity=0.317 Sum_probs=56.9
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHH
Q 041209 89 TRARFEEL-NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 167 (412)
Q Consensus 89 tr~efe~~-~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~ 167 (412)
||.+|-.+ ++.+.-.+...++.+-+..+.. ++.|.++||.++.|++.+.+.+.| +.++... .+.++.|+|||+.
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~~---~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 448 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGID---VQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFL 448 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSCC---CSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHH
Confidence 56665442 3344444444444432334543 678999999999999999999999 7777554 5778999999999
Q ss_pred HHHHhC
Q 041209 168 AAILSG 173 (412)
Q Consensus 168 a~~l~~ 173 (412)
|+.-.|
T Consensus 449 a~~a~G 454 (501)
T 3g25_A 449 AGLAVG 454 (501)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 987664
No 47
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=96.30 E-value=0.0044 Score=63.25 Aligned_cols=51 Identities=22% Similarity=0.140 Sum_probs=43.4
Q ss_pred ccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHhC
Q 041209 121 QVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 173 (412)
Q Consensus 121 ~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~~ 173 (412)
.++.|.++||.++.|++.+.+.+.| +.++... .+.++.|+|||++|+.-.|
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G 475 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAG 475 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcC
Confidence 4788999999999999999999999 7777654 5678999999999998764
No 48
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=96.28 E-value=0.0092 Score=60.44 Aligned_cols=80 Identities=18% Similarity=0.221 Sum_probs=56.6
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHH
Q 041209 89 TRARFEE-LNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 167 (412)
Q Consensus 89 tr~efe~-~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~ 167 (412)
+|.++-. +++.+.-.+...++.+-+..+. .++.|.++||.++.|++.+.+.+.+ +.++... .+.++.|+|||+.
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~l 442 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALM 442 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHH
Confidence 5665533 3344444444444443333343 3578999999999999999999999 7777654 5667999999999
Q ss_pred HHHHhC
Q 041209 168 AAILSG 173 (412)
Q Consensus 168 a~~l~~ 173 (412)
|+.-.+
T Consensus 443 a~~a~G 448 (495)
T 2dpn_A 443 AGVGAG 448 (495)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 987653
No 49
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.24 E-value=0.0063 Score=61.89 Aligned_cols=80 Identities=20% Similarity=0.270 Sum_probs=56.8
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHH
Q 041209 89 TRARFEEL-NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 167 (412)
Q Consensus 89 tr~efe~~-~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~ 167 (412)
||.+|-.+ ++.+.-.+...++.+-+..+. .++.|.++||.++.|++.+.+.+.| +.++... .+.++.|+|||+.
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 447 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYL 447 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHH
Confidence 56665443 334444444444433222454 3678999999999999999999999 7777654 5778999999999
Q ss_pred HHHHhC
Q 041209 168 AAILSG 173 (412)
Q Consensus 168 a~~l~~ 173 (412)
|+.-.|
T Consensus 448 A~~a~G 453 (506)
T 3h3n_X 448 AGLAVG 453 (506)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 987664
No 50
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.24 E-value=0.0058 Score=62.23 Aligned_cols=80 Identities=21% Similarity=0.255 Sum_probs=56.3
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHH
Q 041209 89 TRARFEEL-NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 167 (412)
Q Consensus 89 tr~efe~~-~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~ 167 (412)
||.++-.+ ++.+.-.+...++.+-+..+.. ++.|.++||.++.|++.+.+.+.| +.++... .+.++.|+|||+.
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~---~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 445 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGIR---LHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYL 445 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---ccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHH
Confidence 56655432 2334344444444332233543 678999999999999999999999 7777654 5678999999999
Q ss_pred HHHHhC
Q 041209 168 AAILSG 173 (412)
Q Consensus 168 a~~l~~ 173 (412)
|+.-.+
T Consensus 446 A~~a~G 451 (510)
T 2p3r_A 446 AGLAVG 451 (510)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 987664
No 51
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=96.17 E-value=0.0059 Score=62.11 Aligned_cols=79 Identities=22% Similarity=0.111 Sum_probs=55.9
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHH
Q 041209 89 TRARFEEL-NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 167 (412)
Q Consensus 89 tr~efe~~-~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~ 167 (412)
||.+|-.+ ++.+.-.+...++ .|++.+.. ++.|.++||.++.|++.+.+.+.| +.++... ...++.|+|||+.
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~~---~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 444 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGHA---PQRFFASDGGTRSRVWMGIMADVL-QRPVQLL-ANPLGSAVGAAWV 444 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTCC---CCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-ECCSTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCCC---CCEEEEeCCcccCHHHHHHHHHHh-CCeEEec-CCCCchHHHHHHH
Confidence 56665443 2333333333333 33444543 678999999999999999999999 7787665 3457899999999
Q ss_pred HHHHhC
Q 041209 168 AAILSG 173 (412)
Q Consensus 168 a~~l~~ 173 (412)
|+.-.+
T Consensus 445 A~~a~G 450 (508)
T 3ifr_A 445 AAIGGG 450 (508)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 987764
No 52
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=96.09 E-value=0.016 Score=58.80 Aligned_cols=80 Identities=24% Similarity=0.276 Sum_probs=57.6
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHH
Q 041209 89 TRARFEE-LNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 167 (412)
Q Consensus 89 tr~efe~-~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~ 167 (412)
+|.++-. +++.+.-.+...++.+-+..+.. ++.|.++||.++.|++.+.+.+.| +.++... .+.++.|+|||+.
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~---~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 447 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGVD---LTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYA 447 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---CCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---cceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHH
Confidence 5665544 33444444444444433334543 578999999999999999999999 7777654 5678999999999
Q ss_pred HHHHhC
Q 041209 168 AAILSG 173 (412)
Q Consensus 168 a~~l~~ 173 (412)
|+.-.+
T Consensus 448 A~~~~G 453 (504)
T 2d4w_A 448 AGIAVG 453 (504)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 987664
No 53
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.83 E-value=0.021 Score=57.88 Aligned_cols=80 Identities=24% Similarity=0.222 Sum_probs=56.4
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCCCcc-ceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHH
Q 041209 89 TRARFEE-LNMDLFRKCMEPVEKCLRDSKIDKSQV-HDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAV 166 (412)
Q Consensus 89 tr~efe~-~~~~~~~~~~~~i~~~l~~a~~~~~~i-d~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~ 166 (412)
||.++-. +++.+.-.+...++.+-+..+.. + +.|.++||.++.|++.+.+.+.+ +.++... .+.++.|+|||+
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~---~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~ 450 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGIE---MLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAV 450 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS---CCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---ccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHH
Confidence 5655544 33444444444444432224532 5 67999999999999999999999 7777654 566799999999
Q ss_pred HHHHHhC
Q 041209 167 QAAILSG 173 (412)
Q Consensus 167 ~a~~l~~ 173 (412)
.|+.-.+
T Consensus 451 la~~~~G 457 (503)
T 2w40_A 451 LAGLEVK 457 (503)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 9987653
No 54
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=95.78 E-value=0.021 Score=53.45 Aligned_cols=76 Identities=14% Similarity=0.058 Sum_probs=52.7
Q ss_pred EeHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecC-CcCcHHHHHHHHHhh--CCCcccccCCCchhHHhH
Q 041209 88 ITRARFEEL-NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGG-STRIPKVQQLLQDFF--NGKELCKSINPDEAVAYG 163 (412)
Q Consensus 88 itr~efe~~-~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGG-ssriP~V~~~l~~~f--~~~~~~~~~~pd~aVA~G 163 (412)
.+++++-.- +.-+.+++..+.....+..+ ++.|+++|| .+..|.+++.+.+.+ .+.++..+.+|..+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 466655432 23333333333333333333 456999999 899999999999974 467888888999999999
Q ss_pred HHHHH
Q 041209 164 AAVQA 168 (412)
Q Consensus 164 Aa~~a 168 (412)
||++|
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 55
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.37 E-value=0.023 Score=57.35 Aligned_cols=80 Identities=16% Similarity=0.101 Sum_probs=54.0
Q ss_pred EEeHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHH
Q 041209 87 TITRARFEEL-NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 165 (412)
Q Consensus 87 ~itr~efe~~-~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa 165 (412)
.-||.+|-+. ++.+.-.+...++.+-+..+.. ++.|.++||.|+.|++.+.+.+.| +.++... . .++.|+|||
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~~---~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~-~e~~alGaa 434 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGED---FSQLHIVGGGCQNTLLNQLCADAC-GIRVIAG-P-VEASTLGNI 434 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC---CSEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-C-TTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEeCChhhhHHHHHHHHHHH-CCeeecC-C-ccHhHHHHH
Confidence 3467666443 3444444444444332224433 578999999999999999999999 7777644 3 689999997
Q ss_pred HHHHHHh
Q 041209 166 VQAAILS 172 (412)
Q Consensus 166 ~~a~~l~ 172 (412)
+.|..-.
T Consensus 435 ~~A~~a~ 441 (489)
T 2uyt_A 435 GIQLMTL 441 (489)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 7665543
No 56
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=94.62 E-value=0.14 Score=51.59 Aligned_cols=64 Identities=22% Similarity=0.365 Sum_probs=42.0
Q ss_pred HHHHHHHhhcCCC--CCccceEEEecCCcCcHHHHHHHHHhh----CCC--ccccc---CCCchhHHhHHHHHHH
Q 041209 106 EPVEKCLRDSKID--KSQVHDVVLVGGSTRIPKVQQLLQDFF----NGK--ELCKS---INPDEAVAYGAAVQAA 169 (412)
Q Consensus 106 ~~i~~~l~~a~~~--~~~id~V~LvGGssriP~V~~~l~~~f----~~~--~~~~~---~~pd~aVA~GAa~~a~ 169 (412)
+++.+++..+.++ +.-...|+|+||+|.+|.+.+.|.+.+ |.. ++... .++..++=+|++++|.
T Consensus 396 e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p~~~i~v~~~~~~~er~~s~WiGgsilas 470 (498)
T 3qb0_A 396 DLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTS 470 (498)
T ss_dssp HHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHSTTSCCCEECCSCTGGGGSHHHHHHHHHHT
T ss_pred HHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCCCCeeEEEcCCCCCccCccEEcccEEEec
Confidence 4444555443321 122356999999999999999998755 322 22233 3567899999999984
No 57
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=94.24 E-value=0.17 Score=52.11 Aligned_cols=49 Identities=24% Similarity=0.382 Sum_probs=36.8
Q ss_pred cceEEEecCCcCcHHHHHHHHHhh----C--------CCcccc---cCCCchhHHhHHHHHHHH
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFF----N--------GKELCK---SINPDEAVAYGAAVQAAI 170 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f----~--------~~~~~~---~~~pd~aVA~GAa~~a~~ 170 (412)
...|+|+||+|.+|.+.+.|.+.+ + ..++.. ..+|..++=+||+++|..
T Consensus 501 ~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL 564 (593)
T 4fo0_A 501 YSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACL 564 (593)
T ss_dssp HHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHC
T ss_pred hCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcC
Confidence 467999999999999998887765 1 112222 247788999999999864
No 58
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=93.97 E-value=0.067 Score=53.93 Aligned_cols=72 Identities=10% Similarity=0.010 Sum_probs=50.9
Q ss_pred HHHHHHHHHH--HHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHh-hCCCcccccCCCchhHHhHHHHHHHH
Q 041209 94 EELNMDLFRK--CMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDF-FNGKELCKSINPDEAVAYGAAVQAAI 170 (412)
Q Consensus 94 e~~~~~~~~~--~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~-f~~~~~~~~~~pd~aVA~GAa~~a~~ 170 (412)
..+++-+++. +.-.++.+++...- .+.|.++||.++.|+..+.+.+. | +.++.+. ...++.|+|||++|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~-~~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTA-NAHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEE-SSCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEc-CCCchHHHHHHHHhCc
Confidence 3444444443 33334444443321 26899999999999999999999 9 7787665 4567899999999975
Q ss_pred H
Q 041209 171 L 171 (412)
Q Consensus 171 l 171 (412)
-
T Consensus 436 a 436 (482)
T 3h6e_A 436 G 436 (482)
T ss_dssp T
T ss_pred c
Confidence 4
No 59
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=93.79 E-value=0.12 Score=49.82 Aligned_cols=47 Identities=19% Similarity=0.059 Sum_probs=40.6
Q ss_pred cceEEEecC-CcCcHHHHHHHHHhhC-----CCcccccCCCchhHHhHHHHHH
Q 041209 122 VHDVVLVGG-STRIPKVQQLLQDFFN-----GKELCKSINPDEAVAYGAAVQA 168 (412)
Q Consensus 122 id~V~LvGG-ssriP~V~~~l~~~f~-----~~~~~~~~~pd~aVA~GAa~~a 168 (412)
++.|+++|| .+..|.+++.|++.++ +.++....+|..+-|+|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 446999999 9999999999999872 4677778899999999999975
No 60
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=83.57 E-value=2.3 Score=39.29 Aligned_cols=49 Identities=16% Similarity=0.230 Sum_probs=37.6
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHH
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 171 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l 171 (412)
.+.|+|.||.+..|.+.+.+++.+...++..+. .+.+.++||+.++...
T Consensus 240 p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 240 TNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYKE 288 (299)
T ss_dssp CSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHHH
T ss_pred CCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHHh
Confidence 467999999887788888888887544555555 6688999999988643
No 61
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=81.78 E-value=4.1 Score=39.13 Aligned_cols=74 Identities=15% Similarity=0.205 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccc----cCCCchhHHhHHHHHHHHH
Q 041209 96 LNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK----SINPDEAVAYGAAVQAAIL 171 (412)
Q Consensus 96 ~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~----~~~pd~aVA~GAa~~a~~l 171 (412)
+..-+.+=+...|.+.++... ..++.|+++||+++-|.+.+.|++.+++.++.. .+++|.-=|..-|++|...
T Consensus 261 v~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~ 337 (371)
T 3qbx_A 261 IQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHRF 337 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHHH
Confidence 344444444455555554432 135789999999999999999999996554432 2456655566677777654
Q ss_pred h
Q 041209 172 S 172 (412)
Q Consensus 172 ~ 172 (412)
-
T Consensus 338 l 338 (371)
T 3qbx_A 338 L 338 (371)
T ss_dssp H
T ss_pred H
Confidence 3
No 62
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=80.09 E-value=4.3 Score=38.34 Aligned_cols=51 Identities=18% Similarity=0.216 Sum_probs=38.6
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhC--CCcccccC---CCchhHHhHHHHHHHHHh
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKSI---NPDEAVAYGAAVQAAILS 172 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~--~~~~~~~~---~pd~aVA~GAa~~a~~l~ 172 (412)
++.|+|.||.+.-..+++.|.+.+. +.++..+. -.|.++++|+|.+.....
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 300 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKA 300 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHT
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhc
Confidence 5689999999999999999998762 33444433 347899999988765443
No 63
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=79.86 E-value=5.9 Score=41.11 Aligned_cols=50 Identities=20% Similarity=0.229 Sum_probs=39.4
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhCCCcccc---cCCCchhHHhHHHHHHHHH
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFNGKELCK---SINPDEAVAYGAAVQAAIL 171 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~~~~~~~---~~~pd~aVA~GAa~~a~~l 171 (412)
++.|+|+||.+.-..+++.+.+.+.+.++.. ..-.|-++|+|.|++|+..
T Consensus 600 ~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~~ 652 (657)
T 3ttc_A 600 ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAAR 652 (657)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHHH
T ss_pred CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHHH
Confidence 5789999999999999999999874333332 2344999999999998643
No 64
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=79.57 E-value=6.2 Score=37.35 Aligned_cols=68 Identities=18% Similarity=0.257 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhC--CCcccccC---CCchhHHhHHHHHHHHHhC
Q 041209 101 FRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKSI---NPDEAVAYGAAVQAAILSG 173 (412)
Q Consensus 101 ~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~--~~~~~~~~---~pd~aVA~GAa~~a~~l~~ 173 (412)
.+.+...+.++++..+ ++.|+|.||.+.-..+++.+.+.+. +.++..+. -.|.++++|+|.+.....+
T Consensus 234 ~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 234 FAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 3344445555555554 5789999999999999999998763 33443332 4589999999977655543
No 65
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=78.82 E-value=3.3 Score=43.87 Aligned_cols=51 Identities=27% Similarity=0.334 Sum_probs=39.6
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhC--CCccccc---CCCchhHHhHHHHHHHHHh
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKS---INPDEAVAYGAAVQAAILS 172 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~--~~~~~~~---~~pd~aVA~GAa~~a~~l~ 172 (412)
++.|+|.||.+.-..+++.|.+.+. +.++..+ .-.|-++|+|.|++|+...
T Consensus 694 ~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 694 INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 5789999999999999999998862 3333322 2348999999999987654
No 66
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=77.97 E-value=7.4 Score=37.35 Aligned_cols=73 Identities=15% Similarity=0.190 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccc----cCCCchhHHhHHHHHHHH
Q 041209 95 ELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK----SINPDEAVAYGAAVQAAI 170 (412)
Q Consensus 95 ~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~----~~~pd~aVA~GAa~~a~~ 170 (412)
++..-+.+=+...|.+.+.... ..+.|+++||+++-|.+-+.|++.+++.++.. .+++|.-=|..-|++|..
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~ 342 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMR 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHH
Confidence 4455555555555666665442 35689999999999999999999996544432 245554444445677665
Q ss_pred H
Q 041209 171 L 171 (412)
Q Consensus 171 l 171 (412)
.
T Consensus 343 ~ 343 (370)
T 3cqy_A 343 Y 343 (370)
T ss_dssp H
T ss_pred H
Confidence 4
No 67
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=77.46 E-value=4.5 Score=42.94 Aligned_cols=61 Identities=16% Similarity=0.268 Sum_probs=43.7
Q ss_pred HHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCC--CcccccC---CCchhHHhHHHHHHHHH
Q 041209 106 EPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNG--KELCKSI---NPDEAVAYGAAVQAAIL 171 (412)
Q Consensus 106 ~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~--~~~~~~~---~pd~aVA~GAa~~a~~l 171 (412)
..+.++.++.+ ++.|+|.||...--.+++.+.+.+.. .++..+. --|..+|+|+|++|+..
T Consensus 695 ~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 695 HTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 34444444444 57899999999999999999998742 2333322 23899999999988764
No 68
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=71.73 E-value=9.6 Score=38.86 Aligned_cols=64 Identities=17% Similarity=0.205 Sum_probs=45.9
Q ss_pred HHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCccccc-CCCchhHHhHHHHHHHHHhCC
Q 041209 106 EPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKS-INPDEAVAYGAAVQAAILSGE 174 (412)
Q Consensus 106 ~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~-~~pd~aVA~GAa~~a~~l~~~ 174 (412)
..+.++.+..+ ++.|.|.||.+.-..+++.|.+..+-..+... .-.|.++++|+|+++....+.
T Consensus 297 ~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g~ 361 (576)
T 3ven_A 297 GLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELGD 361 (576)
T ss_dssp HHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcCC
Confidence 44444554444 67999999999999999999876522233322 345899999999999877643
No 69
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=71.35 E-value=16 Score=33.23 Aligned_cols=49 Identities=18% Similarity=0.129 Sum_probs=31.8
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhC-----------CCcccccCCCchhHHhHHHHHHHH
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFN-----------GKELCKSINPDEAVAYGAAVQAAI 170 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~-----------~~~~~~~~~pd~aVA~GAa~~a~~ 170 (412)
.+.|+|-||.+..|.+.+.+++.+. ..++..+...+.+.++|||.++..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 3678999988776766666655441 122333334567899999988754
No 70
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=64.75 E-value=20 Score=33.34 Aligned_cols=48 Identities=19% Similarity=0.152 Sum_probs=32.4
Q ss_pred cceEEEecCCcCc-HHHHHHHHHhhC---------CCcccccCCCchhHHhHHHHHHH
Q 041209 122 VHDVVLVGGSTRI-PKVQQLLQDFFN---------GKELCKSINPDEAVAYGAAVQAA 169 (412)
Q Consensus 122 id~V~LvGGssri-P~V~~~l~~~f~---------~~~~~~~~~pd~aVA~GAa~~a~ 169 (412)
.+.|+|-||.++. |.+.+.|++.+. ..++..+...+.+.++|||.++.
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 4789999998886 555555554431 22344455567899999998863
No 71
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=63.35 E-value=19 Score=33.04 Aligned_cols=50 Identities=16% Similarity=0.147 Sum_probs=35.5
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhCCC-----cccccCCCchhHHhHHHHHHHHH
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFNGK-----ELCKSINPDEAVAYGAAVQAAIL 171 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~~~-----~~~~~~~pd~aVA~GAa~~a~~l 171 (412)
.+.|+|-||-+..|.+.+.|++.+... ++..+...+.+.++|||.++...
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 468999999988777777777766321 23344456789999999887654
No 72
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=62.39 E-value=9.1 Score=35.46 Aligned_cols=45 Identities=18% Similarity=0.152 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhC
Q 041209 99 DLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFN 146 (412)
Q Consensus 99 ~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~ 146 (412)
...+.+...++++|+++++++++|+.|+..|+++++ -+.+.+.|+
T Consensus 215 ~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 215 VAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 345567788999999999999999999999998765 356788883
No 73
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=60.29 E-value=16 Score=33.25 Aligned_cols=47 Identities=21% Similarity=0.226 Sum_probs=31.9
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhCCC------cccccCCCchhHHhHHHHHH
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFNGK------ELCKSINPDEAVAYGAAVQA 168 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~~~------~~~~~~~pd~aVA~GAa~~a 168 (412)
.+.|+|.||.+..|.+.+.+++.+... ++..+...+.+.++|||.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 357888888876677777777766321 22333345678999999876
No 74
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=59.50 E-value=25 Score=32.37 Aligned_cols=49 Identities=22% Similarity=0.226 Sum_probs=32.1
Q ss_pred cceEEEecCCcC-cHHHHHHHHHhhCC---------CcccccCCCchhHHhHHHHHHHH
Q 041209 122 VHDVVLVGGSTR-IPKVQQLLQDFFNG---------KELCKSINPDEAVAYGAAVQAAI 170 (412)
Q Consensus 122 id~V~LvGGssr-iP~V~~~l~~~f~~---------~~~~~~~~pd~aVA~GAa~~a~~ 170 (412)
.+.|+|.||.++ .|.+.+.+++.+.. .++..+...+.+.++|||.++..
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 357899999886 57666666665421 22333334567899999988643
No 75
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=59.25 E-value=5 Score=37.16 Aligned_cols=63 Identities=19% Similarity=0.155 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcC--cHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHH
Q 041209 97 NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTR--IPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAA 169 (412)
Q Consensus 97 ~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssr--iP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~ 169 (412)
+..++++....+-..+...-. . +.+.|+|.||-+. .|.+.+.+++.+ ..|+.+.++||+++|.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i--------~~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL--------VAPQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC--------CCCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc--------cCCCCCHHHHHHHHHh
Confidence 445555555555555544322 2 5678899998764 466666666654 1256778999999874
No 76
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=57.92 E-value=22 Score=33.09 Aligned_cols=47 Identities=21% Similarity=0.209 Sum_probs=31.5
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhCC--------CcccccCCCchhHHhHHHHHH
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFNG--------KELCKSINPDEAVAYGAAVQA 168 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~~--------~~~~~~~~pd~aVA~GAa~~a 168 (412)
.+.|+|-||.+..+.+.+.|++.+.. .++..+.-.+.+.++|||.++
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 46889999988877777777766521 122233344688999999764
No 77
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=57.21 E-value=28 Score=32.20 Aligned_cols=48 Identities=17% Similarity=0.134 Sum_probs=29.9
Q ss_pred cceEEEecCCcCc-HHH----HHHHHHhhC------CCcccccCCCchhHHhHHHHHHH
Q 041209 122 VHDVVLVGGSTRI-PKV----QQLLQDFFN------GKELCKSINPDEAVAYGAAVQAA 169 (412)
Q Consensus 122 id~V~LvGGssri-P~V----~~~l~~~f~------~~~~~~~~~pd~aVA~GAa~~a~ 169 (412)
.+.|+|-||.++. |++ ++.+++... ..++..+.-.+.+.++|||.++.
T Consensus 253 p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~ 311 (321)
T 3vgl_A 253 PSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLAR 311 (321)
T ss_dssp CSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHH
Confidence 3688999988875 444 444443321 11333444467899999998764
No 78
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=56.63 E-value=12 Score=34.31 Aligned_cols=44 Identities=20% Similarity=0.237 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhC
Q 041209 100 LFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFN 146 (412)
Q Consensus 100 ~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~ 146 (412)
..+.+...++++|+++++++++||.|++.|+++++ -+.+.+.|+
T Consensus 208 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg 251 (309)
T 2ebd_A 208 AVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLN 251 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 45566778999999999999999999999998765 345777773
No 79
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=55.99 E-value=12 Score=34.63 Aligned_cols=44 Identities=9% Similarity=0.090 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhC
Q 041209 100 LFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFN 146 (412)
Q Consensus 100 ~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~ 146 (412)
....+...++++|+++++++++|+.|++.+.++++ -+.+.+.|+
T Consensus 218 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 261 (322)
T 1ub7_A 218 AVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLG 261 (322)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 34566778999999999999999999999998765 346777783
No 80
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=55.20 E-value=11 Score=36.20 Aligned_cols=48 Identities=19% Similarity=0.153 Sum_probs=31.9
Q ss_pred ccceEEEecCCcCcHH-HHHHHHHhhCCC---cccccCCCchhHHhHHHHHH
Q 041209 121 QVHDVVLVGGSTRIPK-VQQLLQDFFNGK---ELCKSINPDEAVAYGAAVQA 168 (412)
Q Consensus 121 ~id~V~LvGGssriP~-V~~~l~~~f~~~---~~~~~~~pd~aVA~GAa~~a 168 (412)
+++.|+|.||.+..+. +.+.|.+.+... .+......+.+.++||+.++
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVL 346 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHH
Confidence 4689999999987543 667777766321 22223233468999999876
No 81
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=53.92 E-value=43 Score=30.86 Aligned_cols=49 Identities=22% Similarity=0.276 Sum_probs=33.1
Q ss_pred cceEEEecCCcCc-----HHHHHHHHHhhCC------CcccccCCCchhHHhHHHHHHHH
Q 041209 122 VHDVVLVGGSTRI-----PKVQQLLQDFFNG------KELCKSINPDEAVAYGAAVQAAI 170 (412)
Q Consensus 122 id~V~LvGGssri-----P~V~~~l~~~f~~------~~~~~~~~pd~aVA~GAa~~a~~ 170 (412)
.+.|+|-||-++. +.+++.+++.+.. .++..+.-.+.+.++|||.++..
T Consensus 240 P~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 240 PDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 4688888888765 5677778776521 12233334578999999988754
No 82
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=51.90 E-value=32 Score=31.61 Aligned_cols=49 Identities=27% Similarity=0.222 Sum_probs=30.0
Q ss_pred cceEEEecCCc-Cc-HHHHHHHHHhhC-------CCcccccCCCchhHHhHHHHHHHH
Q 041209 122 VHDVVLVGGST-RI-PKVQQLLQDFFN-------GKELCKSINPDEAVAYGAAVQAAI 170 (412)
Q Consensus 122 id~V~LvGGss-ri-P~V~~~l~~~f~-------~~~~~~~~~pd~aVA~GAa~~a~~ 170 (412)
.+.|+|-||.+ .. |.+.+.|++.+. ...+..+.-.+.+.++|||.++..
T Consensus 238 p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 295 (302)
T 3vov_A 238 PGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAYL 295 (302)
T ss_dssp CSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHHH
T ss_pred CCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHHH
Confidence 46788888877 43 544444444331 112333444578999999988753
No 83
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=51.20 E-value=12 Score=34.99 Aligned_cols=43 Identities=14% Similarity=0.154 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhh
Q 041209 100 LFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFF 145 (412)
Q Consensus 100 ~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f 145 (412)
..+.+...++++|+++++++++||.|++.++++++ -+.+.+.|
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~l 271 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHh
Confidence 34566788999999999999999999999998764 34577777
No 84
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=50.88 E-value=3.2 Score=39.78 Aligned_cols=18 Identities=33% Similarity=0.307 Sum_probs=13.2
Q ss_pred CchhHHhHHHHHHHHHhC
Q 041209 156 PDEAVAYGAAVQAAILSG 173 (412)
Q Consensus 156 pd~aVA~GAa~~a~~l~~ 173 (412)
.-..|+.-|.+.|+....
T Consensus 79 ~~qlva~acLfLA~K~EE 96 (358)
T 2pk2_A 79 PGNSVAPAALFLAAKVEE 96 (358)
T ss_dssp CHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHhhcc
Confidence 347788888888887763
No 85
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=49.99 E-value=7 Score=35.93 Aligned_cols=69 Identities=6% Similarity=-0.103 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCc--HHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHH
Q 041209 96 LNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI--PKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 171 (412)
Q Consensus 96 ~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssri--P~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l 171 (412)
.+..++++....+-..+ ...+. .+.+.|+|.||-++. |.+++.+++... ++ ..|..+...||+.+|...
T Consensus 211 ~A~~i~~~~~~~La~~i-~~~~~-~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i---~~~~~a~~~GA~~la~~~ 281 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-VLRYN-RPDLPLHFIGSVAFHYREVLSSVIKKRGL--TL---GSVLQSPMEGLIQYHHNN 281 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-TGGGC-CTTSCEEEESHHHHHTHHHHHHHHHHTTC--CE---EEEESCSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH-hcccC-CCCceEEEECchHHhhHHHHHHHHHHcCC--ee---cccCcCHHHHHHHHHHhh
Confidence 34455555555555555 22221 145789999998876 777777766431 22 235588999999998643
No 86
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=49.42 E-value=54 Score=31.07 Aligned_cols=48 Identities=19% Similarity=0.251 Sum_probs=30.6
Q ss_pred cceEEEecCCcCc-HHHHHHHHHhhC-------CCcccccCCCchhHHhHHHHHHH
Q 041209 122 VHDVVLVGGSTRI-PKVQQLLQDFFN-------GKELCKSINPDEAVAYGAAVQAA 169 (412)
Q Consensus 122 id~V~LvGGssri-P~V~~~l~~~f~-------~~~~~~~~~pd~aVA~GAa~~a~ 169 (412)
.+.|+|.||.+.. |.+.+.+++.+. ..++......+.+.++|||.++.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 4678999988864 666666655441 11233333446789999998764
No 87
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=49.05 E-value=14 Score=33.95 Aligned_cols=44 Identities=7% Similarity=0.093 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhh
Q 041209 99 DLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFF 145 (412)
Q Consensus 99 ~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f 145 (412)
.....+...++++|++++++++|||.|++.++++++- +.+.+.|
T Consensus 209 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~---d~~~~~l 252 (313)
T 1zow_A 209 FAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIM---ESARERL 252 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHh
Confidence 3445667789999999999999999999999987543 4567777
No 88
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=48.01 E-value=14 Score=34.39 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhh
Q 041209 100 LFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFF 145 (412)
Q Consensus 100 ~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f 145 (412)
..+.+...++++|+++++++++||.|++.++++++ -+.+.+.|
T Consensus 222 ~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~l 264 (331)
T 2x3e_A 222 AVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQL 264 (331)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 34566778999999999999999999999998765 34577777
No 89
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=47.52 E-value=93 Score=23.82 Aligned_cols=49 Identities=22% Similarity=0.221 Sum_probs=38.7
Q ss_pred CHHhHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHhcCC
Q 041209 325 DPADKQKIEKAIDEAIEWLDGNQLVEVDELEDKLKELKGFCNPIIAKMYEGGA 377 (412)
Q Consensus 325 ~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~e~~~ 377 (412)
-..++..+...|++-.+.++. ..+.++.+++.++..+..+...+++.-+
T Consensus 64 v~~~~~ea~~~L~~~~e~ie~----~i~~le~~~~~l~~~l~~lk~~l~~~~~ 112 (117)
T 2zqm_A 64 VKTTKDKAVAELKEKIETLEV----RLNALERQEKKLNEKLKELTAQIQSALR 112 (117)
T ss_dssp EEECHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhccHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 345777777777777777765 6788889999999999999988887664
No 90
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=42.97 E-value=25 Score=34.38 Aligned_cols=46 Identities=7% Similarity=0.193 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhhcCCCCCccceEEEecCCcCc--HHHHHHHHHhhCC
Q 041209 102 RKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI--PKVQQLLQDFFNG 147 (412)
Q Consensus 102 ~~~~~~i~~~l~~a~~~~~~id~V~LvGGssri--P~V~~~l~~~f~~ 147 (412)
......++++|+++++++++|+.|++-|-++.+ |.=.+.|...|++
T Consensus 302 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~fg~ 349 (434)
T 2gp6_A 302 ERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGG 349 (434)
T ss_dssp HHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccchHHHHHHHHHHhcc
Confidence 345678999999999999999999999766655 4555677888854
No 91
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=41.79 E-value=1e+02 Score=25.38 Aligned_cols=47 Identities=11% Similarity=0.205 Sum_probs=31.4
Q ss_pred HhHHHHHHHHHHHHHHHcCC---CCcCHHHHHHHHHHHHHhHHHHHHHHH
Q 041209 327 ADKQKIEKAIDEAIEWLDGN---QLVEVDELEDKLKELKGFCNPIIAKMY 373 (412)
Q Consensus 327 ~e~~~i~~~l~~~~~wl~~~---~~~~~~~~~~~~~~L~~~~~~i~~r~~ 373 (412)
++|..+.+.|.++....... .....++|+.+++.++.....+...+.
T Consensus 96 ~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~ 145 (152)
T 4fla_A 96 EDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQ 145 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 56677777777776666542 233666788888877777777766654
No 92
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=41.78 E-value=31 Score=32.15 Aligned_cols=48 Identities=13% Similarity=0.016 Sum_probs=28.5
Q ss_pred eEEEecCCcCc-HHHHHHHHHhhCC----------CcccccCCCchhHHhHHHHHHHHHh
Q 041209 124 DVVLVGGSTRI-PKVQQLLQDFFNG----------KELCKSINPDEAVAYGAAVQAAILS 172 (412)
Q Consensus 124 ~V~LvGGssri-P~V~~~l~~~f~~----------~~~~~~~~pd~aVA~GAa~~a~~l~ 172 (412)
.|+|.||-+.. |.+.+.+++.+.. .++......+ +.++|||.++....
T Consensus 268 ~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~-a~~~GAa~la~~~~ 326 (347)
T 2ch5_A 268 PILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRH-SSALGGASLGARHI 326 (347)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESS-CTHHHHHHHHHHTT
T ss_pred eEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCC-ChHHHHHHHHHHhc
Confidence 68888887753 6665555554411 1122222234 89999999886544
No 93
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=41.30 E-value=20 Score=33.36 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhh
Q 041209 100 LFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFF 145 (412)
Q Consensus 100 ~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f 145 (412)
....+...++++|++++++++|||.|++-++++++- +.+.+.|
T Consensus 230 ~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~---~~~~~~l 272 (335)
T 1u6e_A 230 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRIN---ELLVKNL 272 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHH---HHHHHHc
Confidence 355667789999999999999999999999987653 3455666
No 94
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=41.01 E-value=12 Score=33.54 Aligned_cols=20 Identities=10% Similarity=0.062 Sum_probs=13.6
Q ss_pred HHhHHHHHHHHHHHHHHHcC
Q 041209 326 PADKQKIEKAIDEAIEWLDG 345 (412)
Q Consensus 326 ~~e~~~i~~~l~~~~~wl~~ 345 (412)
++=+.++...+.++.+|+..
T Consensus 168 ee~r~kl~~~~~el~~~l~p 187 (243)
T 2a01_A 168 DELRQRLAARLEALKENGGA 187 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcch
Confidence 35556677777777777764
No 95
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=40.66 E-value=16 Score=33.93 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=26.9
Q ss_pred cceEEEecCCcCc-HHHHHHHHHhhCC--------CcccccCCCchhHHhHHHHHH
Q 041209 122 VHDVVLVGGSTRI-PKVQQLLQDFFNG--------KELCKSINPDEAVAYGAAVQA 168 (412)
Q Consensus 122 id~V~LvGGssri-P~V~~~l~~~f~~--------~~~~~~~~pd~aVA~GAa~~a 168 (412)
.+.|+|.||.+.. +++.+ +.+.+.. .++..+...+.+.++|||.++
T Consensus 270 p~~IvlgG~i~~~~~~~~~-l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 270 PDLLVIGGGLSNFTAITTQ-LAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp CSEEEEESGGGGSTHHHHS-SGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred CCEEEEeChhhcchhHHHH-HHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 3578888888764 44444 5554421 122223334678899999765
No 96
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=40.63 E-value=47 Score=31.42 Aligned_cols=48 Identities=10% Similarity=-0.061 Sum_probs=28.0
Q ss_pred ceEEEecC-CcCcHHHH------HHHHHhhCCC-----------cccccCCCchhHHhHHHHHHHH
Q 041209 123 HDVVLVGG-STRIPKVQ------QLLQDFFNGK-----------ELCKSINPDEAVAYGAAVQAAI 170 (412)
Q Consensus 123 d~V~LvGG-ssriP~V~------~~l~~~f~~~-----------~~~~~~~pd~aVA~GAa~~a~~ 170 (412)
+.|+|.|| .++.+.+- +.+.+.|... ++......+.+.++|||.++..
T Consensus 306 ~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~~~ 371 (373)
T 2q2r_A 306 LTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCGLD 371 (373)
T ss_dssp SEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHHHh
Confidence 46777788 55544433 4666554221 1222224457899999988754
No 97
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=39.39 E-value=68 Score=22.87 Aligned_cols=42 Identities=10% Similarity=0.168 Sum_probs=27.6
Q ss_pred HHHHHHHhhhcHHHHHHHHHHhhHHHHHHhhhhhcchhhhhcCC
Q 041209 281 VQEAEKYKAEDEEIKKKVEAKNSLENYAYNMSNTVRDEKFAGKL 324 (412)
Q Consensus 281 ~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~ 324 (412)
..+.+++...|...++......+.|+.|-.+++.++. |...+
T Consensus 29 ~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK--frSVl 70 (72)
T 3nmd_A 29 QEKIEELRQRDALIDELELELDQKDELIQMLQNELDK--YRSVI 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccC
Confidence 4445566667777777777777777777777777754 54443
No 98
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=39.17 E-value=24 Score=34.03 Aligned_cols=43 Identities=21% Similarity=0.244 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhhcCCCCCccceEEEecCCcCc--HHHHHHHHHhh
Q 041209 103 KCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI--PKVQQLLQDFF 145 (412)
Q Consensus 103 ~~~~~i~~~l~~a~~~~~~id~V~LvGGssri--P~V~~~l~~~f 145 (412)
.....++++|+++++++++|+.|++-|-+|.+ |.--..+.+.|
T Consensus 276 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~~ 320 (408)
T 1j3n_A 276 GAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVF 320 (408)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHh
Confidence 44567999999999999999999999999975 33344555666
No 99
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=38.58 E-value=57 Score=30.43 Aligned_cols=43 Identities=12% Similarity=0.214 Sum_probs=35.3
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecCCc--CcHHHHHHHHHhhC
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGGST--RIPKVQQLLQDFFN 146 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGGss--riP~V~~~l~~~f~ 146 (412)
....++++|+++++++++||.|+++.-+. .+|...-.|.+.++
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LG 110 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIG 110 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhC
Confidence 34568889999999999999988876553 57988889999884
No 100
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=38.52 E-value=1e+02 Score=28.57 Aligned_cols=68 Identities=15% Similarity=0.107 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHhhc--CCCCCccceEEEecCCcC--cHHHHHHHHHhhC----CCcccccCCCchhHHhHHHHHHHH
Q 041209 99 DLFRKCMEPVEKCLRDS--KIDKSQVHDVVLVGGSTR--IPKVQQLLQDFFN----GKELCKSINPDEAVAYGAAVQAAI 170 (412)
Q Consensus 99 ~~~~~~~~~i~~~l~~a--~~~~~~id~V~LvGGssr--iP~V~~~l~~~f~----~~~~~~~~~pd~aVA~GAa~~a~~ 170 (412)
.+++++...+-.++... -++| +.|+|.||.+. ++.+++.+++... ..++..+.. ..+.++|||.++..
T Consensus 263 ~il~~~~~~La~~i~~l~~~l~P---~~IvlgG~i~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~-~~~~~~GAa~l~~~ 338 (343)
T 2yhw_A 263 SILRTAGTALGLGVVNILHTMNP---SLVILSGVLASHYIHIVKDVIRQQALSSVQDVDVVVSDL-VDPALLGAASMVLD 338 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCC---SEEEEESTTHHHHHHHHHHHHHHHSCGGGTTCEEEECCC-SCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC---CEEEEeCCcHHHHHHHHHHHHHHhcccccCCcEEEEccC-CCchHHHHHHHHHH
Confidence 34444444444443322 2333 57888888763 2334444443321 112222222 34678999988754
No 101
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=38.15 E-value=3.5 Score=38.00 Aligned_cols=67 Identities=10% Similarity=-0.061 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHH
Q 041209 97 NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQA 168 (412)
Q Consensus 97 ~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a 168 (412)
+..++++....+-..+ ...+ ..+.+.|+|.||-+.. +.+.|++.+.. +...-..+..+.++||+++|
T Consensus 210 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~-~~~~i~~~~~a~~~GAa~la 276 (291)
T 1zxo_A 210 IRQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQ-TGIQIGKILQSPMEGLIQYH 276 (291)
T ss_dssp TTHHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTT-TTCCEEEECSCTHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhc-CCcEEeecCCCHHHHHHHHH
Confidence 3345555555444444 2222 1145688888887765 55566666522 11111134578889999876
No 102
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=37.79 E-value=52 Score=30.56 Aligned_cols=45 Identities=11% Similarity=0.019 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhh
Q 041209 98 MDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFF 145 (412)
Q Consensus 98 ~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f 145 (412)
+...+.+...++++|+++++++++|+.+++..++.+| -+.+.+.+
T Consensus 230 ~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i---~~~~~~~l 274 (333)
T 4dfe_A 230 KLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRI---MQSTCRKL 274 (333)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 3445666788999999999999999999999988654 46666777
No 103
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=37.41 E-value=56 Score=31.27 Aligned_cols=69 Identities=12% Similarity=0.197 Sum_probs=53.1
Q ss_pred HHhhHHHHHHhhhhhcchhhhhcCCCHHhHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHH
Q 041209 300 AKNSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLVEVDELEDKLKELKGFCNPI 368 (412)
Q Consensus 300 a~N~lE~~i~~~r~~l~~~~~~~~~~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i 368 (412)
|+-..++++|.+--.+.-.+....+...+....+.++.++.+||..-.++...+++...+.....+.+.
T Consensus 160 A~~l~~~~~y~Itv~~~~~~~~~a~~~g~l~~a~~~l~~v~~~l~kv~d~FkaeL~~aa~~a~~aYeaa 228 (412)
T 2ra1_A 160 AQALRDRLIYDITVAMKAREAQDAVKAGNLDKAKAALDQVNQYVSKVTDAFKAELQKAAQDAKAAYEAA 228 (412)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhhhhhccc
Confidence 455567777777766655556667778888999999999999999877788888888887776555544
No 104
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=36.42 E-value=21 Score=34.27 Aligned_cols=44 Identities=16% Similarity=0.164 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhh
Q 041209 99 DLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFF 145 (412)
Q Consensus 99 ~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f 145 (412)
...+.+...++++|+++++++++||.|++.++++++ -+.+.+.+
T Consensus 284 ~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~l 327 (393)
T 1ted_A 284 YIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSL 327 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHc
Confidence 345566678899999999999999999999998764 34566666
No 105
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=35.78 E-value=7.7 Score=37.10 Aligned_cols=8 Identities=13% Similarity=0.372 Sum_probs=3.2
Q ss_pred CHHHHHHH
Q 041209 273 SKEEIERM 280 (412)
Q Consensus 273 s~e~i~~~ 280 (412)
+.+++...
T Consensus 230 t~~~l~~i 237 (358)
T 2pk2_A 230 TLELLDEL 237 (358)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 44444333
No 106
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=35.42 E-value=64 Score=30.80 Aligned_cols=50 Identities=8% Similarity=0.106 Sum_probs=30.9
Q ss_pred cceEEEecCCcCc-HHHHHHHHHhhC---------CCcccccCCCchhHHhHHHHHHHHH
Q 041209 122 VHDVVLVGGSTRI-PKVQQLLQDFFN---------GKELCKSINPDEAVAYGAAVQAAIL 171 (412)
Q Consensus 122 id~V~LvGGssri-P~V~~~l~~~f~---------~~~~~~~~~pd~aVA~GAa~~a~~l 171 (412)
.+.|+|-||.+.. |.+.+.+++.+. ..++......+.+.++|||+....+
T Consensus 335 P~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~~~~ 394 (406)
T 1z6r_A 335 PQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKDAM 394 (406)
T ss_dssp CSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHHHHT
T ss_pred CCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHHHHH
Confidence 4678888888763 555555554431 1233344455688999998765543
No 107
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=34.95 E-value=49 Score=31.77 Aligned_cols=43 Identities=9% Similarity=0.171 Sum_probs=33.2
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhC
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFN 146 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~ 146 (412)
....++++|+++++++++||.|++...+ ..+|.....|...++
T Consensus 121 a~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LG 165 (392)
T 3led_A 121 AVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALG 165 (392)
T ss_dssp HHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhC
Confidence 4456888999999999999998874332 356877788888884
No 108
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=34.09 E-value=74 Score=29.14 Aligned_cols=49 Identities=18% Similarity=0.161 Sum_probs=31.6
Q ss_pred cceEEEecCCcCc----HHHHHHHHHhhCC---C---------cccccCCCchhHHhHHHHHHHH
Q 041209 122 VHDVVLVGGSTRI----PKVQQLLQDFFNG---K---------ELCKSINPDEAVAYGAAVQAAI 170 (412)
Q Consensus 122 id~V~LvGGssri----P~V~~~l~~~f~~---~---------~~~~~~~pd~aVA~GAa~~a~~ 170 (412)
.+.|+|-||-++. |.+++.+.+.... . .+..+.-.+.|.++|||.++..
T Consensus 225 Pe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~~ 289 (302)
T 3epq_A 225 PXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQ 289 (302)
T ss_dssp CSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHHH
T ss_pred chhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHHH
Confidence 4688888888765 4566666665411 0 1233334568999999988754
No 109
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=33.12 E-value=1.3e+02 Score=28.41 Aligned_cols=49 Identities=10% Similarity=0.233 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 98 MDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 98 ~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
++..+=....++++|+++++++++|+.|++...+ -.+|.....|...++
T Consensus 82 ~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lG 131 (382)
T 1u0m_A 82 REAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMG 131 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhC
Confidence 3444455677889999999999999987654332 236767778888884
No 110
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=32.71 E-value=35 Score=33.07 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhhcCCCCCccceEEEecCCcCc--HHHHHHHHHhhC
Q 041209 103 KCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI--PKVQQLLQDFFN 146 (412)
Q Consensus 103 ~~~~~i~~~l~~a~~~~~~id~V~LvGGssri--P~V~~~l~~~f~ 146 (412)
.....++++|+++++++++|+.|++-|-+|.+ |.=.+.|.+.|+
T Consensus 284 ~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~ 329 (424)
T 1tqy_A 284 EMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALG 329 (424)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCHHHHHHHHHHhc
Confidence 45677899999999999999999999988875 344456777774
No 111
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=32.71 E-value=39 Score=33.21 Aligned_cols=76 Identities=20% Similarity=0.192 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc--CCCCCccceEEEecCCc--CcHHHHHHHHHhh----C-CCcccccCCCchhHHhH
Q 041209 93 FEELNMDLFRKCMEPVEKCLRDS--KIDKSQVHDVVLVGGST--RIPKVQQLLQDFF----N-GKELCKSINPDEAVAYG 163 (412)
Q Consensus 93 fe~~~~~~~~~~~~~i~~~l~~a--~~~~~~id~V~LvGGss--riP~V~~~l~~~f----~-~~~~~~~~~pd~aVA~G 163 (412)
+..++.-+++|....+-..+... .+.++. .++.+||+- .-|.+++.+++.+ . ..++... -++.+..+|
T Consensus 363 ~~~va~~V~~RaA~lla~~ia~i~~~~~~~~--~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~-l~~dgs~iG 439 (451)
T 1bdg_A 363 VRYACEMVVKRAAYLAGAGIACILRRINRSE--VTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLR-LSEDGSGKG 439 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSE--EEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEE-ECTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc--eEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEE-ECCCccHHH
Confidence 44556666777666555444221 112321 255566654 4455555555443 2 2223223 467899999
Q ss_pred HHHHHHHH
Q 041209 164 AAVQAAIL 171 (412)
Q Consensus 164 Aa~~a~~l 171 (412)
||+.|+..
T Consensus 440 AAllA~~~ 447 (451)
T 1bdg_A 440 AAAIAASC 447 (451)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHH
Confidence 99988643
No 112
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=32.67 E-value=35 Score=33.31 Aligned_cols=44 Identities=16% Similarity=0.241 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhcCCCCCccceEEEecCCcCc--HHHHHHHHHhh
Q 041209 102 RKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI--PKVQQLLQDFF 145 (412)
Q Consensus 102 ~~~~~~i~~~l~~a~~~~~~id~V~LvGGssri--P~V~~~l~~~f 145 (412)
......++++|+++++++++|+.|++-|-+|.+ |.=-+.|.+.|
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~~~f 346 (437)
T 2gqd_A 301 EGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTF 346 (437)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHHHHH
No 113
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=31.66 E-value=1.2e+02 Score=28.85 Aligned_cols=49 Identities=12% Similarity=0.191 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 98 MDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 98 ~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
+...+=....++++|+++++++++||.|++...+ ...|.....|...++
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 145 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLD 145 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcC
Confidence 4444555667888999999999999997764322 256777888888884
No 114
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=31.39 E-value=37 Score=33.07 Aligned_cols=45 Identities=11% Similarity=0.265 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhhcCCCCCccceEEEecCCcCc--HHHHHHHHHhhC
Q 041209 102 RKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI--PKVQQLLQDFFN 146 (412)
Q Consensus 102 ~~~~~~i~~~l~~a~~~~~~id~V~LvGGssri--P~V~~~l~~~f~ 146 (412)
......++++|+++++++++|+.|++-|-+|.+ |.=-+.|.+.|+
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~fg 347 (438)
T 2iwz_A 301 EGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFK 347 (438)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcccCHHHHHHHHHHHh
Confidence 345678999999999999999999999999875 333455667773
No 115
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=31.33 E-value=1.3e+02 Score=28.65 Aligned_cols=50 Identities=20% Similarity=0.270 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 97 NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 97 ~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
.+...+=....++++|+++++++++||.|++...+ ..+|.....|...++
T Consensus 99 ~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LG 149 (393)
T 3ov2_A 99 VEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLG 149 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcC
Confidence 34444555667888999999999999998875432 357888888888884
No 116
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=31.30 E-value=1.4e+02 Score=28.54 Aligned_cols=49 Identities=12% Similarity=0.197 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 98 MDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 98 ~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
+...+=....++++|+++++++++||.|++...+ ...|.....|...++
T Consensus 105 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 154 (402)
T 1ee0_A 105 TGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLG 154 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcC
Confidence 4444455667888999999999999997764322 246777788888884
No 117
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=31.24 E-value=38 Score=32.70 Aligned_cols=44 Identities=18% Similarity=0.206 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhcCCCCCccceEEEecCCcCc--HHHHHHHHHhh
Q 041209 102 RKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI--PKVQQLLQDFF 145 (412)
Q Consensus 102 ~~~~~~i~~~l~~a~~~~~~id~V~LvGGssri--P~V~~~l~~~f 145 (412)
......++++|+++++++++|+.|++.|-+|.+ |.=-+.|.+.|
T Consensus 281 ~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~ 326 (416)
T 1e5m_A 281 RGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQAL 326 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHHHHH
No 118
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=31.02 E-value=72 Score=29.97 Aligned_cols=43 Identities=21% Similarity=0.357 Sum_probs=33.6
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhC
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFN 146 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~ 146 (412)
....++++|+++++++++||.|++...+ ...|.....|...++
T Consensus 70 a~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lG 114 (354)
T 4efi_A 70 CRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELD 114 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcC
Confidence 4456788999999999999998875433 356778888888884
No 119
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=30.96 E-value=77 Score=29.32 Aligned_cols=43 Identities=14% Similarity=0.314 Sum_probs=33.0
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhC
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFN 146 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~ 146 (412)
....++++|+++++++++||.|++...+ ..+|.....+...++
T Consensus 62 a~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lG 106 (323)
T 3il3_A 62 GFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLN 106 (323)
T ss_dssp HHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhC
Confidence 4456888999999999999998775332 246877888888884
No 120
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=30.85 E-value=1.3e+02 Score=28.43 Aligned_cols=47 Identities=11% Similarity=0.174 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 100 LFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 100 ~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
..+=....++++|+++++++++||.|++.-.+ ..+|.....|...++
T Consensus 81 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LG 128 (379)
T 3euo_A 81 GVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELG 128 (379)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcC
Confidence 33444567888999999999999998776433 247888888888884
No 121
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=30.73 E-value=1e+02 Score=29.60 Aligned_cols=48 Identities=8% Similarity=0.041 Sum_probs=27.6
Q ss_pred cceEEEecCCcCc-HHHHHHHHHhhC---------CCcccccCCCchhHHhHHHHHHHH
Q 041209 122 VHDVVLVGGSTRI-PKVQQLLQDFFN---------GKELCKSINPDEAVAYGAAVQAAI 170 (412)
Q Consensus 122 id~V~LvGGssri-P~V~~~l~~~f~---------~~~~~~~~~pd~aVA~GAa~~a~~ 170 (412)
.+.|+|-||.+.. |.+.+.|++.+. ..++....-.+. .++|||.++..
T Consensus 358 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~~ 415 (429)
T 1z05_A 358 PEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIKQ 415 (429)
T ss_dssp CSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHHH
Confidence 4678888888763 444444444331 123333333345 89999987653
No 122
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=30.61 E-value=68 Score=29.73 Aligned_cols=43 Identities=14% Similarity=0.303 Sum_probs=33.3
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhC
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFN 146 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~ 146 (412)
....++++|+++++++++||.|++.-.+ ...|.....|...++
T Consensus 69 a~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lg 113 (333)
T 4dfe_A 69 AFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLG 113 (333)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhC
Confidence 4456888999999999999998775332 346888888888884
No 123
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=30.31 E-value=73 Score=30.07 Aligned_cols=43 Identities=9% Similarity=0.141 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhC
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFN 146 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~ 146 (412)
....++++|+++++++++||.|++.-.+ ..+|.+...+...++
T Consensus 78 a~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lG 122 (359)
T 3h78_A 78 MVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLG 122 (359)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcC
Confidence 3456788999999999999988775332 346777888888884
No 124
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=30.18 E-value=39 Score=32.77 Aligned_cols=45 Identities=18% Similarity=0.188 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhcCCCCCccceEEEecCCcCcH--HHHHHHHHhhCC
Q 041209 103 KCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIP--KVQQLLQDFFNG 147 (412)
Q Consensus 103 ~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP--~V~~~l~~~f~~ 147 (412)
.....++++|+++++++++||.|++-|-++.+- .=...+.+.|++
T Consensus 297 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~ 343 (430)
T 1ox0_A 297 GAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK 343 (430)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHHhCC
Confidence 456789999999999999999999999998763 223456778854
No 125
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=29.75 E-value=1.5e+02 Score=28.13 Aligned_cols=49 Identities=16% Similarity=0.278 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 98 MDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 98 ~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
+...+=....++++|+++++++++||.|++...+ ..+|.....|...++
T Consensus 100 ~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 149 (389)
T 1i88_A 100 VEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLG 149 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcC
Confidence 3444445667888999999999999997764322 246777788888884
No 126
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=29.58 E-value=1.6e+02 Score=28.11 Aligned_cols=49 Identities=14% Similarity=0.247 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 98 MDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 98 ~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
....+=....++++|+++++++++||.|++...+ ...|.....|...++
T Consensus 113 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 162 (402)
T 3awk_A 113 LEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLG 162 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcC
Confidence 3444455667888999999999999997764321 257778888888884
No 127
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=29.50 E-value=28 Score=35.93 Aligned_cols=25 Identities=36% Similarity=0.747 Sum_probs=22.4
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhC
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFN 146 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~ 146 (412)
.+.|++|||+|.+|.+.-.|.+.+.
T Consensus 501 y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHHH
Confidence 4569999999999999999999883
No 128
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=29.38 E-value=67 Score=29.09 Aligned_cols=56 Identities=21% Similarity=0.408 Sum_probs=37.5
Q ss_pred HHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHH
Q 041209 106 EPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 167 (412)
Q Consensus 106 ~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~ 167 (412)
..+.+.++.. ....+|.|+| |+|.+|++.+.+++.++ ..+ .-+||-+++|.-+.-+
T Consensus 165 ~~l~~~l~~l--~~~g~D~iVL--GCTh~pll~~~i~~~~~-~~v-~vIDs~~~~a~~~~~~ 220 (269)
T 3ist_A 165 KVVAESLLPL--KSTKIDTVIL--GCTHYPLLKPIIENFMG-DGV-AVINSGEETASEVSAL 220 (269)
T ss_dssp HHHHHHHGGG--GGSCCCEEEE--CSTTGGGGHHHHHHHHC-TTS-EEECTHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HhCCCCEEEE--CCCCHHHHHHHHHHHcC-CCC-eEECcHHHHHHHHHHH
Confidence 3444444432 2235777766 99999999999999994 222 2358888888776543
No 129
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=29.10 E-value=55 Score=27.19 Aligned_cols=60 Identities=22% Similarity=0.278 Sum_probs=39.9
Q ss_pred CceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCccceEEEecCCcCcHHHHHHHHHh
Q 041209 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSK-IDKSQVHDVVLVGGSTRIPKVQQLLQDF 144 (412)
Q Consensus 81 ~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~-~~~~~id~V~LvGGssriP~V~~~l~~~ 144 (412)
..++.+-|=...|++ .+.+++.+-..+.|.+.+ ...++|+ ++-|=|+--||++-+.+.+.
T Consensus 10 ~~~~ri~IV~arfn~---~I~~~Ll~gA~~~l~~~G~v~~~~i~-v~~VPGafEiP~aa~~la~~ 70 (156)
T 3nq4_A 10 APDARVAITIARFNQ---FINDSLLDGAVDALTRIGQVKDDNIT-VVWVPGAYELPLATEALAKS 70 (156)
T ss_dssp CTTCCEEEEEESTTH---HHHHHHHHHHHHHHHHTTCCCTTSEE-EEEESSTTTHHHHHHHHHHH
T ss_pred CCCCEEEEEEeeCcH---HHHHHHHHHHHHHHHHcCCCcccceE-EEEcCcHHHHHHHHHHHHhc
Confidence 334444444445644 344444455666777888 8777886 78899999999999888654
No 130
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=29.09 E-value=88 Score=28.85 Aligned_cols=43 Identities=16% Similarity=0.264 Sum_probs=33.0
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhC
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFN 146 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~ 146 (412)
....++++|+++++++++||.|++.-.+ ...|.....+...++
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lG 100 (321)
T 3il6_A 56 CHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIG 100 (321)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcC
Confidence 3456788999999999999988775432 346878888888884
No 131
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=29.04 E-value=1.6e+02 Score=27.90 Aligned_cols=50 Identities=14% Similarity=0.193 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 97 NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 97 ~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
.....+=....++++|+++++++++||.|++...+ -.+|.....|...++
T Consensus 93 ~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LG 143 (387)
T 3oit_A 93 ADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLG 143 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhC
Confidence 33444555667888999999999999998875432 346778888888884
No 132
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=28.86 E-value=1.1e+02 Score=28.71 Aligned_cols=49 Identities=22% Similarity=0.249 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 98 MDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 98 ~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
++..+=....++++|+++++++++|+.|++...+ ..+|.....|...++
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lG 142 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLG 142 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcC
Confidence 3444445677889999999999999987764332 246667778888884
No 133
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=28.80 E-value=1.3e+02 Score=28.76 Aligned_cols=49 Identities=16% Similarity=0.312 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 98 MDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 98 ~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
+...+=....++++|+++++++++||.|++.-.+ ..+|.....|...++
T Consensus 123 ~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 172 (413)
T 1xes_A 123 MEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLG 172 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcC
Confidence 4444445667888999999999999987764332 246777778888884
No 134
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=28.63 E-value=1.6e+02 Score=28.29 Aligned_cols=49 Identities=12% Similarity=0.221 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 98 MDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 98 ~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
+...+=....++++|+++++++++||.|++...+ ..+|.+...|...++
T Consensus 118 ~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LG 167 (413)
T 2p0u_A 118 AQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLG 167 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhC
Confidence 3444445667888999999999999997764322 356777788888884
No 135
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=28.49 E-value=95 Score=28.28 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhC
Q 041209 103 KCMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFN 146 (412)
Q Consensus 103 ~~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~ 146 (412)
-....++++|+++++++++|+.|++.-.+ ..+|.+...|...++
T Consensus 54 l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lg 99 (317)
T 1hnj_A 54 MGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLG 99 (317)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhC
Confidence 34567888999999999999986653222 236778888888884
No 136
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=28.18 E-value=99 Score=28.53 Aligned_cols=68 Identities=10% Similarity=0.119 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHhhc--CCCCCccce-EEEecCCcCc--H-----HHHHHHHH--hh----CCCcccccCCCchhHHh
Q 041209 99 DLFRKCMEPVEKCLRDS--KIDKSQVHD-VVLVGGSTRI--P-----KVQQLLQD--FF----NGKELCKSINPDEAVAY 162 (412)
Q Consensus 99 ~~~~~~~~~i~~~l~~a--~~~~~~id~-V~LvGGssri--P-----~V~~~l~~--~f----~~~~~~~~~~pd~aVA~ 162 (412)
.+++++...+-..+... -+.| +. |++.||-+.. + .+++.+.+ .+ ...++.... .+.+..+
T Consensus 243 ~~~~~~~~~Lg~~i~~l~~~l~P---~~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~a~l~ 318 (332)
T 1sz2_A 243 RALSLFCVIMGRFGGNLALNLGT---FGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIV-HDNPGLL 318 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC---TTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEEC-CSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC---CeEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEE-CCchhHH
Confidence 34444444444443332 1233 44 8999998863 3 34445543 12 112233333 6788999
Q ss_pred HHHHHHHH
Q 041209 163 GAAVQAAI 170 (412)
Q Consensus 163 GAa~~a~~ 170 (412)
||+.++..
T Consensus 319 GAa~l~~~ 326 (332)
T 1sz2_A 319 GSGAHLRQ 326 (332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988754
No 137
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=28.15 E-value=81 Score=28.56 Aligned_cols=46 Identities=15% Similarity=0.300 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhC
Q 041209 101 FRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFN 146 (412)
Q Consensus 101 ~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~ 146 (412)
.+-....++++|+++++++++||.|++.-.+ ..+|.+...|...++
T Consensus 51 ~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lg 98 (309)
T 2ebd_A 51 TYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLK 98 (309)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhC
Confidence 3334567888999999999999987764332 235667788888884
No 138
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=28.10 E-value=1e+02 Score=31.62 Aligned_cols=47 Identities=17% Similarity=0.200 Sum_probs=0.0
Q ss_pred EEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcC
Q 041209 86 ATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTR 133 (412)
Q Consensus 86 ~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssr 133 (412)
+.||..+.+ -++---.-+..-++-+|++++++.++|+.|+|.||+..
T Consensus 500 i~itq~DIr-~~qlAKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~ 546 (631)
T 3zyy_X 500 IVITEADIQ-NLIRAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGK 546 (631)
T ss_dssp EEEEHHHHH-HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCS
T ss_pred EEEeHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccc
No 139
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=27.89 E-value=76 Score=29.52 Aligned_cols=42 Identities=12% Similarity=0.162 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHH
Q 041209 97 NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQ 138 (412)
Q Consensus 97 ~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~ 138 (412)
...-.+.+...++++|+++++++++||.|...-|-..++.++
T Consensus 44 ~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~~~~lr 85 (330)
T 2ivn_A 44 AEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALR 85 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCchHHHH
Confidence 344556667789999999999999999998876766665554
No 140
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=27.81 E-value=95 Score=28.88 Aligned_cols=53 Identities=11% Similarity=0.110 Sum_probs=35.8
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhCCC--cccccCCC
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFNGK--ELCKSINP 156 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~~~--~~~~~~~p 156 (412)
....++++|+++++++++||.|++.-.+ ...|.....|...++-. .+..+++.
T Consensus 72 a~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~ 128 (345)
T 3s21_A 72 ATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVAN 128 (345)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECC
Confidence 3456788899999999999987664322 24677778888888422 23444554
No 141
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=27.72 E-value=56 Score=29.15 Aligned_cols=38 Identities=21% Similarity=0.173 Sum_probs=26.9
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHH
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 165 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa 165 (412)
+|.|+| |++.+|.+.+.|++.+ +.++ +|+-.+++.=+.
T Consensus 175 ad~IVL--GCTh~p~l~~~i~~~~-gVpv---ID~~~a~~~~~~ 212 (245)
T 3qvl_A 175 SGAIVL--GSGGMATLAQQLTREL-RVPV---IDGVSAAVKMVE 212 (245)
T ss_dssp CSEEEE--CCGGGGGGHHHHHHHH-TSCE---ECHHHHHHHHHH
T ss_pred CCEEEE--CCCChHHHHHHHHHHc-CCeE---EccHHHHHHHHH
Confidence 677666 7889999999999999 4333 466555544443
No 142
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=27.66 E-value=86 Score=29.31 Aligned_cols=43 Identities=12% Similarity=0.110 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHH
Q 041209 99 DLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLL 141 (412)
Q Consensus 99 ~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l 141 (412)
.-.+.+...|+++|+++++++++||.|...-|-...+.++--+
T Consensus 51 ~H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrvg~ 93 (334)
T 3eno_A 51 HHSEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTA 93 (334)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHHHH
Confidence 3445667789999999999999999999998877777766443
No 143
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=27.07 E-value=51 Score=31.60 Aligned_cols=45 Identities=7% Similarity=0.059 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHh
Q 041209 98 MDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDF 144 (412)
Q Consensus 98 ~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~ 144 (412)
+-.++.+...++++|+++++++++||.+++-+.++++ +....+..
T Consensus 203 ~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~--~~~~~~~l 247 (396)
T 1xpm_A 203 DAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKM--GKKALESI 247 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHH--HHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHH--HHHHHHHH
Confidence 3445667778999999999999999999999988875 44444444
No 144
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=27.00 E-value=66 Score=32.21 Aligned_cols=57 Identities=18% Similarity=0.259 Sum_probs=37.7
Q ss_pred HHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhC--CCcccccC---CCchhHHhHHHH
Q 041209 105 MEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKSI---NPDEAVAYGAAV 166 (412)
Q Consensus 105 ~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~--~~~~~~~~---~pd~aVA~GAa~ 166 (412)
...+.++++..+ ++.|+|+||.+.-..+++.+.+... +.++..+. -.|.++..|.+-
T Consensus 237 ~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~~~~~~Dngamia~~~ 298 (540)
T 3en9_A 237 TEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWLG 298 (540)
T ss_dssp HHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCCHHHHSSCHHHHHHHH
T ss_pred HHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCHHHHHHHH
Confidence 344555555555 5689999999999999999998763 22333322 235666666553
No 145
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=26.94 E-value=49 Score=30.91 Aligned_cols=46 Identities=7% Similarity=-0.028 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhh
Q 041209 97 NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFF 145 (412)
Q Consensus 97 ~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f 145 (412)
.+-.++.+...++++|+++++++++||.+++.-++.+| -+.+.+.+
T Consensus 241 ~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i---~~~~~~~l 286 (345)
T 3s21_A 241 LIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPH---TAAFVKSF 286 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH---HHHHHHHc
Confidence 33445566678889999999999999999999988664 46666666
No 146
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=26.60 E-value=1.7e+02 Score=27.94 Aligned_cols=50 Identities=12% Similarity=0.130 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 97 NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 97 ~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
.+...+=....++++|+++++++++||.|++...+ ..+|.....|...++
T Consensus 112 ~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 162 (406)
T 2d3m_A 112 VPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQCAKLLG 162 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHHT
T ss_pred HHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcC
Confidence 34444455667888999999999999998765432 246767778888884
No 147
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=26.38 E-value=99 Score=29.42 Aligned_cols=66 Identities=11% Similarity=0.007 Sum_probs=39.4
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecC--CcCcHHHHHHHHHhhCC--CcccccCCCchhHHhHHHHHHH
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGG--STRIPKVQQLLQDFFNG--KELCKSINPDEAVAYGAAVQAA 169 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGG--ssriP~V~~~l~~~f~~--~~~~~~~~pd~aVA~GAa~~a~ 169 (412)
....++++|+++++++++||.|++.-- ....|.+-..+...++- ..+..+++.--+-..-|...|+
T Consensus 33 ~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~v~~~Css~~~al~~A~ 102 (395)
T 4e1l_A 33 GTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAA 102 (395)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceEEEccccchHHHHHHHHHH
Confidence 456688899999999999999876321 12345666778887732 2234444543333333333333
No 148
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=26.03 E-value=56 Score=29.77 Aligned_cols=41 Identities=20% Similarity=0.333 Sum_probs=30.3
Q ss_pred ccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHH
Q 041209 121 QVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 165 (412)
Q Consensus 121 ~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa 165 (412)
.+|.|+| |+|-+|++.+.+++.+| ..+ .-+||-+++|.-+.
T Consensus 196 g~D~iIL--GCTh~PlL~~~i~~~~~-~~v-~lIDs~~~~A~~~~ 236 (274)
T 3uhf_A 196 TPDALIL--ACTHFPLLGRSLSKYFG-DKT-KLIHSGDAIVEFLK 236 (274)
T ss_dssp CCSEEEE--CSTTGGGGHHHHHHHHC-TTC-EEEEHHHHHHHHHH
T ss_pred CCCEEEE--CCCChHHHHHHHHHHcC-CCC-EEEcCHHHHHHHHH
Confidence 4777777 99999999999999994 222 23577777776554
No 149
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=25.74 E-value=77 Score=25.87 Aligned_cols=29 Identities=0% Similarity=0.248 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccceEEEe
Q 041209 100 LFRKCMEPVEKCLRDSKIDKSQVHDVVLV 128 (412)
Q Consensus 100 ~~~~~~~~i~~~l~~a~~~~~~id~V~Lv 128 (412)
+++.+.++++++++..+++++||-+|+++
T Consensus 49 I~~At~ELl~eii~~N~l~~eDIvSv~FT 77 (148)
T 1xho_A 49 IVAETQKLLKEMAEKNGLEEDDIISIIFT 77 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHEEEEEEE
Confidence 45566777888899999999999887764
No 150
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=25.69 E-value=1.8e+02 Score=28.56 Aligned_cols=46 Identities=11% Similarity=0.210 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 101 FRKCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 101 ~~~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
.+=....++++|+++++++++||.|+++--+ ..+|.....|...++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LG 157 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELG 157 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhC
Confidence 3445567888999999999999998776432 257888888988884
No 151
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=25.28 E-value=91 Score=29.41 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=32.3
Q ss_pred HHHHHHHHhhcCCCCCccceEEEecC--CcCcHHHHHHHHHhhC
Q 041209 105 MEPVEKCLRDSKIDKSQVHDVVLVGG--STRIPKVQQLLQDFFN 146 (412)
Q Consensus 105 ~~~i~~~l~~a~~~~~~id~V~LvGG--ssriP~V~~~l~~~f~ 146 (412)
...++++|+++++++++||.|++.-. ....|..-..+...++
T Consensus 85 ~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lG 128 (365)
T 3gwa_A 85 YEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLG 128 (365)
T ss_dssp HHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcC
Confidence 35678899999999999999887532 2346777788888884
No 152
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=25.24 E-value=1.1e+02 Score=29.14 Aligned_cols=66 Identities=9% Similarity=-0.054 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhc-CCCCCccceEEEecC---CcCcHHHHHHHHHhhCC--CcccccCCCchhHHhHHHHHHH
Q 041209 104 CMEPVEKCLRDS-KIDKSQVHDVVLVGG---STRIPKVQQLLQDFFNG--KELCKSINPDEAVAYGAAVQAA 169 (412)
Q Consensus 104 ~~~~i~~~l~~a-~~~~~~id~V~LvGG---ssriP~V~~~l~~~f~~--~~~~~~~~pd~aVA~GAa~~a~ 169 (412)
....++++|+++ ++++++||.|++--. ....|.+...+...++- ..+..++|.--+-..-|...|+
T Consensus 31 ~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~aCss~l~Al~~A~ 102 (387)
T 3goa_A 31 SAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAA 102 (387)
T ss_dssp HHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEEECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcEeEecCcchHHHHHHHHHH
Confidence 456788899999 999999999776321 11256677777777732 2334444543333333433333
No 153
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=24.96 E-value=1.2e+02 Score=28.83 Aligned_cols=54 Identities=9% Similarity=0.067 Sum_probs=36.2
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecC--CcCcHHHHHHHHHhhCC--CcccccCCCc
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGG--STRIPKVQQLLQDFFNG--KELCKSINPD 157 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGG--ssriP~V~~~l~~~f~~--~~~~~~~~pd 157 (412)
....++++|+++++++++||.|++.-. ....|.+-..+...++- ..+..+++.-
T Consensus 35 ~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~a 92 (396)
T 4dd5_A 35 GVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIV 92 (396)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECCG
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceEEEeccc
Confidence 456688899999999999999876421 12346677788888832 2334444543
No 154
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=24.94 E-value=1.1e+02 Score=28.84 Aligned_cols=44 Identities=9% Similarity=0.045 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhh
Q 041209 99 DLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFF 145 (412)
Q Consensus 99 ~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f 145 (412)
-.++.+...++++|++++++++|||.+++.-++.+| .+.+.+.+
T Consensus 263 ~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i---~~~~~~~L 306 (365)
T 3gwa_A 263 FSLAEVPRAADRLLALAGEPRENIDCFVLHQANRFM---LDALRKKM 306 (365)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 345666778899999999999999999998887654 46666666
No 155
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=24.75 E-value=45 Score=36.07 Aligned_cols=79 Identities=13% Similarity=0.140 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc--CC--CC--C-ccceEEEecCCcCc-HHHHHHHHHh----hCCCcccccCCCchhH
Q 041209 93 FEELNMDLFRKCMEPVEKCLRDS--KI--DK--S-QVHDVVLVGGSTRI-PKVQQLLQDF----FNGKELCKSINPDEAV 160 (412)
Q Consensus 93 fe~~~~~~~~~~~~~i~~~l~~a--~~--~~--~-~id~V~LvGGssri-P~V~~~l~~~----f~~~~~~~~~~pd~aV 160 (412)
+..++..+++|....+-..+... .+ .| . .-..|.+-||-+.. |.+++.+.+. .+...+. -.-++.+.
T Consensus 371 ~~~~a~~v~~raa~llA~gia~ii~~l~~dp~~~~~~~~IvigGgV~~~~~~~~~~l~~~l~~~~~~~~~~-i~~a~dgs 449 (917)
T 1cza_N 371 VQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVR-FLLSESGS 449 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTTEEEE-EEECTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccCcceEEEECCchhhccHHHHHHHHHHHHHhcCCCceE-EEEeccch
Confidence 44566667777666555443221 01 11 1 11345555555554 5555555444 4222221 22358899
Q ss_pred HhHHHHHHHHHh
Q 041209 161 AYGAAVQAAILS 172 (412)
Q Consensus 161 A~GAa~~a~~l~ 172 (412)
.+|||+.|+.-.
T Consensus 450 ~~GAA~laa~~~ 461 (917)
T 1cza_N 450 GKGAAMVTAVAY 461 (917)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhHh
Confidence 999999998644
No 156
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=24.56 E-value=98 Score=28.40 Aligned_cols=43 Identities=9% Similarity=0.319 Sum_probs=32.1
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhC
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFN 146 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~ 146 (412)
....++++|+++++.+++||.|++.-.+ ...|.....|...++
T Consensus 65 a~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lg 109 (335)
T 1u6e_A 65 ATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLG 109 (335)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhC
Confidence 4566788999999999999987654322 246777788888884
No 157
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=24.35 E-value=81 Score=27.75 Aligned_cols=38 Identities=13% Similarity=0.211 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHH
Q 041209 101 FRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQ 138 (412)
Q Consensus 101 ~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~ 138 (412)
.+++...|+++|+++++++.+||.|.+.=|-.....+|
T Consensus 35 ~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglR 72 (231)
T 2gel_A 35 TQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVR 72 (231)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHH
Confidence 34466778999999999999999999977765556665
No 158
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=24.34 E-value=1.3e+02 Score=27.65 Aligned_cols=43 Identities=21% Similarity=0.187 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhh
Q 041209 100 LFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFF 145 (412)
Q Consensus 100 ~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f 145 (412)
.++.+...++++|+++++++++||.+++--++.+| -+.+.+.+
T Consensus 222 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i---~~~~~~~l 264 (323)
T 3il3_A 222 AVRELSNVVEETLLANNLDKKDLDWLVPHQANLRI---ITATAKKL 264 (323)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTCCEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 44566678899999999999999999998887543 46677776
No 159
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=24.16 E-value=35 Score=32.54 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhh
Q 041209 101 FRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFF 145 (412)
Q Consensus 101 ~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f 145 (412)
...+. .++++|+++++++++||.|++.++++++ -+.+.+.+
T Consensus 252 ~~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i---~d~~~~~l 292 (382)
T 1u0m_A 252 EPLAP-ALKELAGEHGWDASDLDFYIVHAGGPRI---LDDLSTFL 292 (382)
T ss_dssp HHHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHH---HHHHHHHS
T ss_pred HHHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHc
Confidence 44556 7899999999999999999999998754 34577777
No 160
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=24.05 E-value=1.1e+02 Score=27.75 Aligned_cols=44 Identities=18% Similarity=0.359 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhC
Q 041209 103 KCMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFN 146 (412)
Q Consensus 103 ~~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~ 146 (412)
-....++++|+++++.+++||.|++.-.+ ...|.+...+...++
T Consensus 54 l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lg 99 (313)
T 1zow_A 54 LAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLG 99 (313)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhC
Confidence 34566888999999999999987764332 245667778888884
No 161
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=24.01 E-value=83 Score=30.93 Aligned_cols=77 Identities=8% Similarity=-0.034 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH----hhcCCCCCccceEEEecCCcCcHHHHHHHHHhh----CC------CcccccCCCch
Q 041209 93 FEELNMDLFRKCMEPVEKCL----RDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFF----NG------KELCKSINPDE 158 (412)
Q Consensus 93 fe~~~~~~~~~~~~~i~~~l----~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f----~~------~~~~~~~~pd~ 158 (412)
+..+|.-+.+|...++-..+ ...+ +.. ..|.+-||-...|.+++.+++.+ +. .....-.-...
T Consensus 354 v~~ia~~V~~RaA~l~A~~iaai~~~~~--~~~-~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~d 430 (457)
T 2yhx_A 354 VRRXLFLIAAYAFRLVVCXIXAICQKKG--YSS-GHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAID 430 (457)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHT--CSS-EEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCc-EEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCC
Confidence 33566666777666544433 3333 211 35666666666677777766554 21 11122234567
Q ss_pred hHHhHHHHHHHHHh
Q 041209 159 AVAYGAAVQAAILS 172 (412)
Q Consensus 159 aVA~GAa~~a~~l~ 172 (412)
..-.|||+.|+..+
T Consensus 431 gsg~GAAl~aa~~~ 444 (457)
T 2yhx_A 431 GXGAASXVIXSIAS 444 (457)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHh
Confidence 88899999998765
No 162
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=23.92 E-value=84 Score=25.05 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccceEEEe
Q 041209 99 DLFRKCMEPVEKCLRDSKIDKSQVHDVVLV 128 (412)
Q Consensus 99 ~~~~~~~~~i~~~l~~a~~~~~~id~V~Lv 128 (412)
.+.+.+.+++.++++..+++++||-+|+++
T Consensus 19 ~I~~at~eLl~~i~~~N~l~~~dIvSv~FT 48 (127)
T 1dbf_A 19 EILQKTKQLLEKIIEENHTKPEDVVQMLLS 48 (127)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEE
Confidence 345667778888899999999999887764
No 163
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=23.57 E-value=77 Score=27.65 Aligned_cols=64 Identities=13% Similarity=0.165 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHh----hCCCcccccCCCchhHHhHH
Q 041209 101 FRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDF----FNGKELCKSINPDEAVAYGA 164 (412)
Q Consensus 101 ~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~----f~~~~~~~~~~pd~aVA~GA 164 (412)
.+++...|+++|+++++++.+||.|.+.=|-.....+|=-+.-. +.-..+...++..++.|..+
T Consensus 36 s~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~iPl~gVstL~a~a~~~ 103 (213)
T 3r6m_A 36 TKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQAS 103 (213)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEEEEcCHHHHHHhh
Confidence 34556678999999999999999999988777777776544321 11123334455555555543
No 164
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=23.51 E-value=1.8e+02 Score=21.59 Aligned_cols=42 Identities=7% Similarity=0.114 Sum_probs=18.6
Q ss_pred HHHhhHHHHHHhhhhhcchhhhhcCCCHHhHHHHHHHHHHHHHHHc
Q 041209 299 EAKNSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLD 344 (412)
Q Consensus 299 ~a~N~lE~~i~~~r~~l~~~~~~~~~~~~e~~~i~~~l~~~~~wl~ 344 (412)
.+.++|...|..+...|.. ... .+.+...+...+.+...+..
T Consensus 9 ~~l~el~~WL~~~e~~l~~--~~~--~~~d~~~v~~~l~~h~~l~~ 50 (119)
T 3uun_A 9 TALEEVLSWLLSAEDTLQA--QGE--ISNDVEVVKDQFHTHEGYMM 50 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HCS--CCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC--CCC--CCCCHHHHHHHHHHHHHHHH
Confidence 4445555555554444432 111 12344455555555555443
No 165
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=23.20 E-value=1.1e+02 Score=27.77 Aligned_cols=43 Identities=23% Similarity=0.325 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhC
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFN 146 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~ 146 (412)
....++++|+++++++++|+.|++.-.+ ..+|.+...|...++
T Consensus 54 a~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lg 98 (322)
T 1ub7_A 54 AFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFG 98 (322)
T ss_dssp HHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhC
Confidence 4566888999999999999986653322 236667788888884
No 166
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=23.02 E-value=1.7e+02 Score=21.82 Aligned_cols=17 Identities=6% Similarity=0.216 Sum_probs=8.1
Q ss_pred hHHHHHHHHHHHHHHHc
Q 041209 328 DKQKIEKAIDEAIEWLD 344 (412)
Q Consensus 328 e~~~i~~~l~~~~~wl~ 344 (412)
+...+...+.+...+..
T Consensus 34 d~~~v~~~l~~h~~l~~ 50 (118)
T 3uul_A 34 DVEDVKEQFATHETFMM 50 (118)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 44445555555444443
No 167
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=22.24 E-value=1.6e+02 Score=25.64 Aligned_cols=48 Identities=23% Similarity=0.214 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHH
Q 041209 91 ARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQD 143 (412)
Q Consensus 91 ~efe~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~ 143 (412)
++-+++.+.+.+.+...+++++++.+ --.+.|.||+|-.++.+..++.
T Consensus 8 ~~~~~l~~~~A~~i~~~i~~~i~~~~-----~~~l~LsgGstp~~~y~~L~~~ 55 (226)
T 3lwd_A 8 EGRQRLAERLADTVAQALEADLAKRE-----RALLVVSGGSTPKPFFTSLAAK 55 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSS-----CEEEEECCSSTTHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCC-----CEEEEEcCCCCHHHHHHHHHhc
Confidence 34455666677777777777775533 2368999999999999988864
No 168
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=22.13 E-value=1e+02 Score=24.34 Aligned_cols=30 Identities=17% Similarity=0.267 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCC-CccceEEEe
Q 041209 99 DLFRKCMEPVEKCLRDSKIDK-SQVHDVVLV 128 (412)
Q Consensus 99 ~~~~~~~~~i~~~l~~a~~~~-~~id~V~Lv 128 (412)
.+.+.+.+++.++++..++++ +||-+|+++
T Consensus 18 ~I~~at~eLl~~i~~~N~l~~~~divSv~FT 48 (122)
T 1ufy_A 18 AIHQATRELLLKMLEANGIQSYEELAAVIFT 48 (122)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCChHhEEEEEEE
Confidence 346667778888999999999 999887764
No 169
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=21.93 E-value=59 Score=33.52 Aligned_cols=69 Identities=19% Similarity=0.265 Sum_probs=39.3
Q ss_pred cccchhHHHHHHhcc-cCCC------CC-eEEEe-cC--------CCCCchHHHHHHHHHHHHHHHH--hhccCCCcccH
Q 041209 2 RIINEPTAAAIAYGL-DNKA------SR-TVKAT-AG--------DTHLGGEDFDNRLVNHFVAEFK--RKHKKDISGNA 62 (412)
Q Consensus 2 ~li~EPtAAAl~y~~-~~~~------~~-~Vla~-~g--------d~~lGG~d~D~~l~~~~~~~~~--~~~~~~~~~~~ 62 (412)
-++.+|.||+++++. .... .. .|... .| ...+||+++|..|.++|..+.- ..+........
T Consensus 254 yl~~qavlAlyasGl~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~ 333 (655)
T 4am6_A 254 AIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGW 333 (655)
T ss_dssp EEEEHHHHHHHHSCCSSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHH
T ss_pred eeccHHHHHHHhCCCCCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchH
Confidence 467899999998885 2211 00 11111 11 2579999999999999876521 01112223344
Q ss_pred HHHHHhhc
Q 041209 63 RALRRLQT 70 (412)
Q Consensus 63 ~~~~~l~~ 70 (412)
..++.+++
T Consensus 334 eiVrdIKE 341 (655)
T 4am6_A 334 LLAERLKK 341 (655)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55566665
No 170
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=21.66 E-value=1.2e+02 Score=27.97 Aligned_cols=44 Identities=11% Similarity=0.212 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhhcCCCCCccceEEEecCC--cCcHHHHHHHHHhhC
Q 041209 103 KCMEPVEKCLRDSKIDKSQVHDVVLVGGS--TRIPKVQQLLQDFFN 146 (412)
Q Consensus 103 ~~~~~i~~~l~~a~~~~~~id~V~LvGGs--sriP~V~~~l~~~f~ 146 (412)
-....++++|+++++++++|+.|++.-++ ..+|.....|...++
T Consensus 63 la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lg 108 (339)
T 1mzj_A 63 MGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELG 108 (339)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhC
Confidence 34567888999999999999987654322 236667788888884
No 171
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=21.57 E-value=59 Score=30.63 Aligned_cols=41 Identities=15% Similarity=0.112 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhhcC------CCCCccceEEEecCCcCcHHHHHHHHHhh
Q 041209 101 FRKCMEPVEKCLRDSK------IDKSQVHDVVLVGGSTRIPKVQQLLQDFF 145 (412)
Q Consensus 101 ~~~~~~~i~~~l~~a~------~~~~~id~V~LvGGssriP~V~~~l~~~f 145 (412)
.+.+...++++|++++ +++++|+.| +.++++++ -+.+.+.+
T Consensus 266 ~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i---~d~~~~~l 312 (374)
T 2h84_A 266 GSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSI---LMNIENSL 312 (374)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHH---HHHHHHHc
Confidence 4556667889999999 999999999 99988654 34566777
No 172
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=21.50 E-value=39 Score=32.59 Aligned_cols=31 Identities=16% Similarity=0.134 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecCCcCc
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI 134 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGGssri 134 (412)
....++++|+++++++++|+.|++-|-+|.+
T Consensus 281 ~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~ 311 (415)
T 1tqy_B 281 LERAIRLALNDAGTGPEDVDVVFADGAGVPE 311 (415)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECCCCCSHH
T ss_pred HHHHHHHHHHHcCCCHhHCCEEEEeCCCCcC
No 173
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=21.47 E-value=68 Score=28.50 Aligned_cols=50 Identities=30% Similarity=0.527 Sum_probs=36.4
Q ss_pred CCCCCccceEEEecCCc-----------------CcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHH
Q 041209 116 KIDKSQVHDVVLVGGST-----------------RIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 171 (412)
Q Consensus 116 ~~~~~~id~V~LvGGss-----------------riP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l 171 (412)
.+.+++.|.|++.||.. .-|.+.++|++..... -+--+|+-|+.++|..-
T Consensus 102 dv~~~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~g------k~IaaIC~G~~~La~ag 168 (242)
T 3l3b_A 102 QIRVEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAK------KPIGAVCISPAVVVALL 168 (242)
T ss_dssp GCCGGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTT------CCEEEETTHHHHHHHHH
T ss_pred HCCcccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcC------CEEEEECHHHHHHHHhC
Confidence 34567789999999963 2488999998888322 33467889998887653
No 174
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=21.43 E-value=83 Score=27.51 Aligned_cols=40 Identities=13% Similarity=0.037 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHH
Q 041209 99 DLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQ 138 (412)
Q Consensus 99 ~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~ 138 (412)
.-.+++...|+++|+++++++.+||.|.+.-|-.....+|
T Consensus 44 ~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlR 83 (218)
T 2a6a_A 44 KHAEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLR 83 (218)
T ss_dssp GGGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHH
Confidence 3445566778999999999999999999988865555554
No 175
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=21.39 E-value=2e+02 Score=27.72 Aligned_cols=44 Identities=11% Similarity=0.170 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhhcCCCCCccceEEEecCC-cCcHHHHHHHHHhhC
Q 041209 103 KCMEPVEKCLRDSKIDKSQVHDVVLVGGS-TRIPKVQQLLQDFFN 146 (412)
Q Consensus 103 ~~~~~i~~~l~~a~~~~~~id~V~LvGGs-sriP~V~~~l~~~f~ 146 (412)
=....++++|+++++++++||.|++.-.+ -.+|.+...|...++
T Consensus 140 La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LG 184 (413)
T 3v7i_A 140 YGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLP 184 (413)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhC
Confidence 34566788899999999999998885432 256888888888884
No 176
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=21.18 E-value=1.4e+02 Score=28.05 Aligned_cols=43 Identities=9% Similarity=-0.012 Sum_probs=29.1
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecCC---cCcHHHHHHHHHhhC
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGGS---TRIPKVQQLLQDFFN 146 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGGs---sriP~V~~~l~~~f~ 146 (412)
....++++|+++++++++||.|++.-.+ .-.+.....|...++
T Consensus 58 a~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG 103 (357)
T 3s3l_A 58 AARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAV 103 (357)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhC
Confidence 4456788999999999999998775431 112233556667773
No 177
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=21.07 E-value=59 Score=30.68 Aligned_cols=42 Identities=14% Similarity=0.194 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccceEEE-ecCCcCcHHHHHHH
Q 041209 100 LFRKCMEPVEKCLRDSKIDKSQVHDVVL-VGGSTRIPKVQQLL 141 (412)
Q Consensus 100 ~~~~~~~~i~~~l~~a~~~~~~id~V~L-vGGssriP~V~~~l 141 (412)
.+..+...++++|++++++++|||.+++ --+..++..+.+.+
T Consensus 236 ~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~~~~~~~~l 278 (357)
T 3s3l_A 236 YIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGTGHELHDLL 278 (357)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCSSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHHHHHHHHHc
Confidence 4566778899999999999999999997 55555566555554
No 178
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=20.83 E-value=3e+02 Score=24.85 Aligned_cols=102 Identities=14% Similarity=0.188 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhh--hcHHHHHHHHHHhhHHHHHHhhhhhcch--hhhhcCCCH---HhHHHHHHHHHHHHHHHcCC
Q 041209 274 KEEIERMVQEAEKYKA--EDEEIKKKVEAKNSLENYAYNMSNTVRD--EKFAGKLDP---ADKQKIEKAIDEAIEWLDGN 346 (412)
Q Consensus 274 ~e~i~~~~~~~~~~~~--~D~~~~~~~~a~N~lE~~i~~~r~~l~~--~~~~~~~~~---~e~~~i~~~l~~~~~wl~~~ 346 (412)
..++++++..+.-+.. .++......+.|..|.-|.-.+|..+.. ..+...+.| +=+.++...+..+..-|..+
T Consensus 87 ~~~~eeLr~~L~p~~eelr~kl~~~veelk~~L~Py~eelr~k~~~~leeLr~~l~P~ae~~~~kl~~~~e~L~~ql~~~ 166 (273)
T 3s84_A 87 RENADSLQASLRPHADELKAKIDQNVEELKGRLTPYADEFKVKIDQTVEELRRSLAPYAQDTQEKLNHQLEGLTFQMKKN 166 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred CCcCHHHHHHHHHHHHHhHHHHHHHHHhc
Q 041209 347 QLVEVDELEDKLKELKGFCNPIIAKMYEG 375 (412)
Q Consensus 347 ~~~~~~~~~~~~~~L~~~~~~i~~r~~e~ 375 (412)
...-.+-+....++|+..+.|....+..+
T Consensus 167 a~~L~~~l~~~~eeLr~~L~p~ae~lr~~ 195 (273)
T 3s84_A 167 AEELKARISASAEELRQRLAPLAEDVRGN 195 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 179
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=20.79 E-value=75 Score=25.91 Aligned_cols=45 Identities=18% Similarity=0.355 Sum_probs=31.9
Q ss_pred CCccceEEEecCCc-----CcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHH
Q 041209 119 KSQVHDVVLVGGST-----RIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAA 169 (412)
Q Consensus 119 ~~~id~V~LvGGss-----riP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~ 169 (412)
+.+.|.|++.||.. .-|.+.++|++..... -+--+++-|+.++|.
T Consensus 61 ~~~~D~livpGG~~~~~~~~~~~l~~~l~~~~~~~------k~i~aiC~G~~~La~ 110 (168)
T 3l18_A 61 PDEFDALVLPGGKAPEIVRLNEKAVMITRRMFEDD------KPVASICHGPQILIS 110 (168)
T ss_dssp GGGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTT------CCEEEETTTHHHHHH
T ss_pred HhhCCEEEECCCcCHHHhccCHHHHHHHHHHHHCC------CEEEEECHhHHHHHH
Confidence 45678999999963 4566778888777322 344678888888775
No 180
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=20.72 E-value=46 Score=32.30 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhcCCCCCccceEEEecCCcCc
Q 041209 102 RKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI 134 (412)
Q Consensus 102 ~~~~~~i~~~l~~a~~~~~~id~V~LvGGssri 134 (412)
......++++|+++++++++||.|++.|-+|.+
T Consensus 294 ~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~ 326 (431)
T 2ix4_A 294 KGAVLAMTRALRQSGLCPNQIDYVNAHATSTPI 326 (431)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcc
No 181
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=20.67 E-value=1.1e+02 Score=27.01 Aligned_cols=49 Identities=20% Similarity=0.206 Sum_probs=32.8
Q ss_pred EeHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHh
Q 041209 88 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDF 144 (412)
Q Consensus 88 itr~efe~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~ 144 (412)
=+++++ .+.+.+.+...+.+++++.+ --.+.|.||+|-.++.+..++..
T Consensus 12 ~~~~~l---~~~~A~~i~~~i~~~i~~~~-----~~~l~lsgGstp~~~y~~L~~~~ 60 (233)
T 3nwp_A 12 DTPSAL---EQQLASKIASQLQEAVDARG-----KASLVVSGGSTPLKLFQLLSMKS 60 (233)
T ss_dssp SSHHHH---HHHHHHHHHHHHHHHHHHHS-----CEEEEECCSSTTHHHHHHHHHCC
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHhCC-----CEEEEEcCCCCHHHHHHHHHhcC
Confidence 355554 44455555666666665533 23689999999999999888653
No 182
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=20.58 E-value=1.1e+02 Score=28.97 Aligned_cols=43 Identities=9% Similarity=0.129 Sum_probs=30.5
Q ss_pred HHHHHHHHHhhcCCCCCccceEEEecC--CcCcHHHHHHHHHhhC
Q 041209 104 CMEPVEKCLRDSKIDKSQVHDVVLVGG--STRIPKVQQLLQDFFN 146 (412)
Q Consensus 104 ~~~~i~~~l~~a~~~~~~id~V~LvGG--ssriP~V~~~l~~~f~ 146 (412)
....++++|+++++++++||.|++.-- ....|.+-..+...++
T Consensus 33 ~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lG 77 (394)
T 3ss6_A 33 AVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAG 77 (394)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcC
Confidence 456678899999999999999876321 1134556677777773
No 183
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=20.46 E-value=83 Score=29.64 Aligned_cols=44 Identities=11% Similarity=0.146 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhh
Q 041209 99 DLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFF 145 (412)
Q Consensus 99 ~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f 145 (412)
-.++.+...++++|++++++++|||.+++.-++.+| -+.+.+.+
T Consensus 251 ~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i---~~~~~~~l 294 (359)
T 3h78_A 251 HASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRI---LDAVQEQL 294 (359)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHh
Confidence 345566788999999999999999999998887554 35666666
No 184
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=20.32 E-value=79 Score=30.29 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcC
Q 041209 97 NMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTR 133 (412)
Q Consensus 97 ~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssr 133 (412)
.+-.+..+...++++|++++++++|||.+++.=++.|
T Consensus 286 ~~~a~~~~~~~i~~~L~~~gl~~~dId~~v~Hqan~~ 322 (392)
T 3led_A 286 FKEVVPLVSEMIIEHAREIGIDPHGLKRMWLHQANIN 322 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEcCCCHH
Confidence 3445566777899999999999999999998877754
No 185
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=20.23 E-value=78 Score=26.55 Aligned_cols=47 Identities=23% Similarity=0.345 Sum_probs=33.6
Q ss_pred CCCCccceEEEecCCc-----CcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHH
Q 041209 117 IDKSQVHDVVLVGGST-----RIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAA 169 (412)
Q Consensus 117 ~~~~~id~V~LvGGss-----riP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~ 169 (412)
+.+.+.|.|++.||.. .-|.+.++|++.....+ +=-+||-|+.++|.
T Consensus 65 v~~~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k------~iaaIC~g~~~La~ 116 (177)
T 4hcj_A 65 VDAVEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQK------IVAGIGSGVVIMAN 116 (177)
T ss_dssp CCGGGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTC------EEEEETTHHHHHHH
T ss_pred CCHhHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCC------EEEEecccHHHHHH
Confidence 4567789999999954 34778888888773322 33578888887764
No 186
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=20.11 E-value=48 Score=32.01 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhcCCCCCccceEEEecCCcCc
Q 041209 103 KCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRI 134 (412)
Q Consensus 103 ~~~~~i~~~l~~a~~~~~~id~V~LvGGssri 134 (412)
.....++++|+++++++++||.|++-|-+|.+
T Consensus 286 ~~~~ai~~al~~agl~~~dId~ve~HgtgT~~ 317 (416)
T 2wge_A 286 RAGRAMTRSLELAGLSPADIDHVNAHGTATPI 317 (416)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCCCHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCCCcC
Confidence 45678899999999999999999999988864
Done!