Query 041224
Match_columns 400
No_of_seqs 249 out of 1787
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 07:55:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041224.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041224hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 2.4E-66 8.2E-71 518.1 35.8 325 27-371 22-414 (448)
2 1rmg_A Rgase A, rhamnogalactur 100.0 3E-62 1E-66 486.8 38.1 333 30-386 18-356 (422)
3 1bhe_A PEHA, polygalacturonase 100.0 5.3E-61 1.8E-65 472.8 40.0 326 28-385 10-374 (376)
4 1czf_A Polygalacturonase II; b 100.0 2E-59 6.8E-64 457.3 35.8 320 30-385 27-358 (362)
5 2uvf_A Exopolygalacturonase; G 100.0 9.4E-59 3.2E-63 481.1 37.0 355 26-395 150-608 (608)
6 2iq7_A Endopolygalacturonase; 100.0 2.8E-57 9.7E-62 439.6 35.3 316 47-386 6-334 (339)
7 1nhc_A Polygalacturonase I; be 100.0 3.6E-57 1.2E-61 438.4 35.5 315 46-385 5-332 (336)
8 1hg8_A Endopolygalacturonase; 100.0 1.4E-56 4.6E-61 435.9 36.9 316 47-385 6-345 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 1.6E-56 5.3E-61 434.1 36.8 312 48-385 11-335 (339)
10 1k5c_A Endopolygalacturonase; 100.0 1E-56 3.4E-61 433.9 25.4 305 49-384 8-328 (335)
11 2x6w_A Tail spike protein; vir 100.0 9.9E-50 3.4E-54 400.7 21.6 293 30-371 49-385 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 4.8E-43 1.7E-47 357.4 18.4 299 34-370 144-521 (549)
13 1ogo_X Dextranase; hydrolase, 100.0 2.2E-40 7.7E-45 337.4 26.0 262 65-370 230-546 (574)
14 3gq8_A Preneck appendage prote 100.0 5.5E-39 1.9E-43 324.5 25.6 267 29-342 19-309 (609)
15 1h80_A IOTA-carrageenase; hydr 100.0 1.7E-38 5.7E-43 316.9 27.9 300 27-369 16-360 (464)
16 3gqn_A Preneck appendage prote 100.0 1.6E-38 5.5E-43 325.5 27.5 234 29-303 19-275 (772)
17 2vbk_A Tailspike-protein; vira 100.0 1.6E-32 5.3E-37 262.6 8.9 213 30-275 49-286 (514)
18 2pyg_A Poly(beta-D-mannuronate 100.0 1.6E-29 5.4E-34 249.1 29.5 307 32-371 2-361 (377)
19 3jur_A EXO-poly-alpha-D-galact 99.9 7.4E-26 2.5E-30 225.9 20.8 227 117-370 192-444 (448)
20 3eqn_A Glucan 1,3-beta-glucosi 99.9 2.3E-22 8E-27 206.4 23.3 265 29-341 46-329 (758)
21 2uvf_A Exopolygalacturonase; G 99.9 1.2E-21 4.1E-26 203.1 26.8 223 116-369 332-584 (608)
22 1ia5_A Polygalacturonase; glyc 99.9 8.3E-21 2.8E-25 183.6 28.3 203 152-380 66-306 (339)
23 1czf_A Polygalacturonase II; b 99.9 4.6E-21 1.6E-25 186.7 26.0 203 152-381 89-330 (362)
24 2iq7_A Endopolygalacturonase; 99.9 1.5E-20 5.2E-25 181.8 28.3 203 152-380 62-304 (339)
25 1nhc_A Polygalacturonase I; be 99.9 3.7E-20 1.3E-24 178.9 28.2 223 124-380 41-303 (336)
26 1rmg_A Rgase A, rhamnogalactur 99.9 1.5E-19 5.2E-24 179.5 30.8 169 175-371 129-311 (422)
27 1bhe_A PEHA, polygalacturonase 99.9 1E-19 3.5E-24 178.6 25.3 218 92-342 110-364 (376)
28 1hg8_A Endopolygalacturonase; 99.9 3.3E-19 1.1E-23 172.9 28.5 226 124-381 41-317 (349)
29 1k5c_A Endopolygalacturonase; 99.8 7E-20 2.4E-24 176.5 22.3 223 124-381 39-301 (335)
30 1ogo_X Dextranase; hydrolase, 99.8 5.5E-18 1.9E-22 172.8 24.0 236 66-342 264-546 (574)
31 1x0c_A Isopullulanase; glycosi 99.8 7.7E-18 2.6E-22 171.8 22.7 249 66-342 222-521 (549)
32 2inu_A Insulin fructotransfera 99.6 8.9E-14 3E-18 134.0 19.3 224 30-280 12-281 (410)
33 3gq8_A Preneck appendage prote 99.5 9E-12 3.1E-16 126.3 30.2 219 116-369 135-399 (609)
34 1h80_A IOTA-carrageenase; hydr 99.5 2.3E-13 8E-18 135.7 18.3 158 156-350 106-278 (464)
35 3gqn_A Preneck appendage prote 99.5 1E-11 3.5E-16 127.9 29.5 219 116-369 135-399 (772)
36 2x6w_A Tail spike protein; vir 99.5 2.2E-12 7.6E-17 130.1 20.0 227 92-366 151-408 (600)
37 2pyg_A Poly(beta-D-mannuronate 99.4 1.6E-11 5.4E-16 120.4 20.8 167 122-304 132-334 (377)
38 1ru4_A Pectate lyase, PEL9A; p 99.2 8.7E-10 3E-14 108.3 22.4 246 27-309 11-298 (400)
39 3eqn_A Glucan 1,3-beta-glucosi 99.2 1.8E-10 6.1E-15 118.8 14.0 91 29-130 397-494 (758)
40 1dbg_A Chondroitinase B; beta 99.1 2.2E-09 7.6E-14 108.0 18.9 204 48-281 30-271 (506)
41 3uw0_A Pectinesterase; right-h 98.7 2E-07 6.8E-12 90.0 14.5 153 47-242 42-218 (364)
42 3zsc_A Pectate trisaccharide-l 98.7 2.7E-06 9.2E-11 81.1 20.9 106 153-274 85-194 (340)
43 1pcl_A Pectate lyase E; lyase 98.7 1.4E-06 4.7E-11 83.9 19.1 108 152-275 97-228 (355)
44 3vmv_A Pectate lyase; polysacc 98.6 1.5E-06 5E-11 82.6 18.2 156 123-337 78-249 (326)
45 1gq8_A Pectinesterase; hydrola 98.6 4E-06 1.4E-10 79.5 19.2 208 48-306 18-246 (319)
46 1pxz_A Major pollen allergen J 98.6 2.2E-06 7.4E-11 82.4 17.2 132 124-274 88-226 (346)
47 1pxz_A Major pollen allergen J 98.6 2.8E-06 9.5E-11 81.6 17.9 196 51-305 57-273 (346)
48 1xg2_A Pectinesterase 1; prote 98.6 5.8E-06 2E-10 78.4 19.7 208 48-306 14-242 (317)
49 1idk_A Pectin lyase A; signal, 98.4 1E-05 3.6E-10 77.9 17.4 67 199-274 152-233 (359)
50 1air_A Pectate lyase C, PELC; 98.4 5.3E-06 1.8E-10 79.8 15.2 72 199-274 129-215 (353)
51 3zsc_A Pectate trisaccharide-l 98.4 1.5E-05 5.1E-10 76.0 17.3 51 221-280 115-167 (340)
52 2qy1_A Pectate lyase II; GAG l 98.4 7.2E-06 2.5E-10 78.3 15.2 75 199-274 112-204 (330)
53 2qy1_A Pectate lyase II; GAG l 98.3 1.1E-05 3.8E-10 77.0 15.4 140 152-308 87-254 (330)
54 1qcx_A Pectin lyase B; beta-he 98.2 2.6E-05 9E-10 75.2 15.3 67 199-274 152-233 (359)
55 1vbl_A Pectate lyase 47; PL 47 98.2 5.3E-06 1.8E-10 81.3 10.5 76 199-274 188-282 (416)
56 2nsp_A Pectinesterase A; micha 98.2 4.6E-05 1.6E-09 73.0 15.6 180 47-274 16-230 (342)
57 2o04_A Pectate lyase, PL; hexa 98.1 1E-05 3.5E-10 79.0 10.1 76 199-274 182-276 (399)
58 1pcl_A Pectate lyase E; lyase 98.1 0.00053 1.8E-08 65.9 21.6 185 47-274 31-249 (355)
59 1qcx_A Pectin lyase B; beta-he 98.1 0.00011 3.8E-09 70.8 16.9 150 124-308 108-284 (359)
60 2x3h_A K5 lyase, K5A lyase; ba 98.1 0.0011 3.9E-08 60.7 22.1 172 30-230 62-247 (542)
61 1idk_A Pectin lyase A; signal, 98.0 6.9E-05 2.4E-09 72.2 14.3 150 124-308 108-284 (359)
62 1pe9_A Pectate lyase A; parall 98.0 3.2E-05 1.1E-09 74.4 10.4 126 123-274 86-238 (361)
63 1air_A Pectate lyase C, PELC; 97.9 7.1E-05 2.4E-09 71.9 12.5 159 118-307 82-264 (353)
64 1vbl_A Pectate lyase 47; PL 47 97.9 4.8E-05 1.7E-09 74.5 11.1 128 123-274 131-304 (416)
65 1pe9_A Pectate lyase A; parall 97.9 7.5E-05 2.6E-09 71.9 12.0 173 47-273 39-259 (361)
66 2inu_A Insulin fructotransfera 97.9 0.00022 7.6E-09 68.8 14.2 127 159-306 136-278 (410)
67 2o04_A Pectate lyase, PL; hexa 97.8 0.0001 3.4E-09 71.9 10.6 127 123-274 126-298 (399)
68 1ru4_A Pectate lyase, PEL9A; p 97.6 0.0003 1E-08 68.9 10.9 109 152-274 109-230 (400)
69 3vmv_A Pectate lyase; polysacc 97.5 0.0044 1.5E-07 58.7 17.2 114 173-303 120-249 (326)
70 3grh_A YBHC, acyl-COA thioeste 97.3 0.0043 1.5E-07 60.3 15.1 138 155-305 197-364 (422)
71 2vbk_A Tailspike-protein; vira 96.8 0.0032 1.1E-07 61.1 8.0 95 123-246 178-287 (514)
72 1gq8_A Pectinesterase; hydrola 95.7 0.28 9.7E-06 46.1 15.0 112 180-304 92-210 (319)
73 3t9g_A Pectate lyase; PL3, par 95.6 0.63 2.2E-05 39.8 15.4 106 182-306 52-160 (196)
74 1xg2_A Pectinesterase 1; prote 95.6 0.26 8.8E-06 46.4 14.3 115 176-304 85-206 (317)
75 1dbg_A Chondroitinase B; beta 95.4 0.16 5.3E-06 51.0 13.0 147 151-304 216-392 (506)
76 3t9g_A Pectate lyase; PL3, par 95.4 0.77 2.6E-05 39.3 15.2 131 160-305 53-183 (196)
77 2nsp_A Pectinesterase A; micha 94.3 0.34 1.2E-05 46.0 11.4 111 180-303 94-230 (342)
78 1ee6_A Pectate lyase; parallel 94.0 1.4 4.7E-05 37.9 13.3 15 262-276 141-155 (197)
79 3uw0_A Pectinesterase; right-h 93.6 0.63 2.2E-05 44.5 11.9 113 180-303 120-255 (364)
80 3b4n_A Endo-pectate lyase; pec 92.7 4.3 0.00015 37.8 15.5 16 125-141 124-139 (344)
81 1ee6_A Pectate lyase; parallel 91.8 2 6.7E-05 36.9 11.1 109 182-309 48-159 (197)
82 2v5i_A Salmonella typhimurium 91.7 8.8 0.0003 36.0 17.7 82 208-304 272-377 (559)
83 2xc1_A Bifunctional tail prote 91.5 11 0.00038 36.7 17.4 82 208-304 376-481 (666)
84 3ju4_A Endo-N-acetylneuraminid 88.6 0.17 5.7E-06 48.7 2.1 40 38-82 4-43 (670)
85 2vfm_A Bifunctional tail prote 87.5 4 0.00014 38.2 10.4 82 208-304 269-374 (559)
86 3riq_A Tailspike protein; righ 85.5 13 0.00046 35.5 12.9 81 208-303 262-364 (543)
87 3b4n_A Endo-pectate lyase; pec 75.7 18 0.00061 33.7 10.0 52 183-241 159-211 (344)
88 3riq_A Tailspike protein; righ 75.1 60 0.0021 31.1 14.4 68 231-300 262-344 (543)
89 2vfm_A Bifunctional tail prote 62.3 1E+02 0.0036 28.9 18.8 66 231-298 269-351 (559)
90 2x3h_A K5 lyase, K5A lyase; ba 56.9 1.2E+02 0.0041 27.9 11.5 17 291-307 166-182 (542)
91 2v5i_A Salmonella typhimurium 44.0 69 0.0024 30.0 7.7 66 231-298 272-354 (559)
92 2xc1_A Bifunctional tail prote 33.9 1.2E+02 0.0041 29.7 7.8 66 231-298 376-458 (666)
93 3bh7_B Protein XRP2; protein-p 21.2 3.4E+02 0.012 25.4 8.5 96 119-240 43-143 (352)
94 3grh_A YBHC, acyl-COA thioeste 20.1 5.8E+02 0.02 24.4 12.6 113 180-303 199-331 (422)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=2.4e-66 Score=518.11 Aligned_cols=325 Identities=26% Similarity=0.406 Sum_probs=293.7
Q ss_pred CCCCeeEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeeeeecCCCCCCCeEEEEeEEEEccCC
Q 041224 27 PSYASSVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPCKSSSINVQIQGNIVAPHS 106 (400)
Q Consensus 27 ~~~~~~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l~l~~~~ks~~v~l~~~g~i~~~~~ 106 (400)
..+++.+||+||||+|||.+|||+|||+||+ +|++. ++++|+||+| +|++++|.| +| +++|+++|+|+++.+
T Consensus 22 ~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~-~c~~~-ggg~v~vP~G-~yl~~~l~l----~s-~v~l~l~gtL~~s~d 93 (448)
T 3jur_A 22 QIPDREVNLLDFGARGDGRTDCSESFKRAIE-ELSKQ-GGGRLIVPEG-VFLTGPIHL----KS-NIELHVKGTIKFIPD 93 (448)
T ss_dssp CCCSCEEEGGGGTCCCEEEEECHHHHHHHHH-HHHHH-TCEEEEECSS-EEEESCEEC----CT-TEEEEESSEEEECCC
T ss_pred CCCCcEEEEEecccCCCCCeecHHHHHHHHH-hhhhc-CCeEEEECCC-cEEEeeeEe----CC-CcEEEEEEEEEecCC
Confidence 4577899999999999999999999999995 56654 6889999999 999999999 68 999999999999999
Q ss_pred -CCc-cCC----------CccccEEEeeeeceEEecCeeEeCCC--ccccccC---------------------------
Q 041224 107 -SAW-DGH----------DKKKWLLFSNVNGLTVNGNGKIDGKG--ASWWSNK--------------------------- 145 (400)
Q Consensus 107 -~~~-~~~----------~~~~~i~~~~~~nv~I~G~G~idg~g--~~~~~~~--------------------------- 145 (400)
.+| +.. ...+||.+.+++||+|+|.|+|||+| +.||+..
T Consensus 94 ~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 173 (448)
T 3jur_A 94 PERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAER 173 (448)
T ss_dssp GGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHHH
T ss_pred HHHhCcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhcc
Confidence 888 321 23579999999999999999999999 8899631
Q ss_pred ------------CCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCCCCCCCCeeeecCcccEEE
Q 041224 146 ------------QNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSNVQI 213 (400)
Q Consensus 146 ------------~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I 213 (400)
...||++|.|.+|+|++|++++++|||+|++++..|+|++|++++|.++ ++|+||||+.+|+||+|
T Consensus 174 ~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I 251 (448)
T 3jur_A 174 GTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLI 251 (448)
T ss_dssp TCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEE
T ss_pred cCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEE
Confidence 1268999999999999999999999999999999999999999999997 58999999999999999
Q ss_pred EeeEEecCCceEEEcCC-----------ceeEEEEeeEE--cCCc-eEEEeccCCCCCCCCEEEEEEEeeEEeCCcceEE
Q 041224 214 RDCTIATGDDCVAIGTD-----------TSNIAVTGVIC--GPGH-GISIGSLGANGGTSIVEDVHVRDCTFKGTKNGAR 279 (400)
Q Consensus 214 ~n~~i~~~dD~i~i~s~-----------~~ni~i~n~~~--~~~~-gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~ 279 (400)
+||+|.++||||+++++ ++||+|+||+| ..+| |++|||++ .+.++||+|+||++.++.+|++
T Consensus 252 ~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~----~~~v~nV~v~n~~~~~t~~Gir 327 (448)
T 3jur_A 252 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM----SGGVRNVVARNNVYMNVERALR 327 (448)
T ss_dssp ESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC----TTCEEEEEEESCEEESCSEEEE
T ss_pred EeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcc----cCcEEEEEEEEEEEecccceEE
Confidence 99999999999999997 89999999999 6677 89999984 5799999999999999999999
Q ss_pred EEeecCCCeeEEeEEEEeEEEecCCccE-EEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCCcceEEEEecCCCCee
Q 041224 280 IKTWQGGSGHARRISFERIRLESSDNPI-IIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSSTEEAVQLSCSESVGCT 358 (400)
Q Consensus 280 i~~~~~~~g~i~nI~f~ni~~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~i~i~~~~~~~~~ 358 (400)
||++.+++|.|+||+|+||+|+++.+|+ .|++.|+... +...+.|+||+|+||+++. ...++.+.|.++.||+
T Consensus 328 IKt~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~-----~~~~~~i~nI~~~NI~~t~-~~~~i~i~g~~~~p~~ 401 (448)
T 3jur_A 328 LKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEE-----GEYLPVVRSVFVKNLKATG-GKYAVRIEGLENDYVK 401 (448)
T ss_dssp EECCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGCC-----CSCCCEEEEEEEESCEEEE-CSEEEEEECBTTBCEE
T ss_pred EEEEcCCCceEeeEEEEEEEEECCccccEEEEeeccCCC-----CCCCceEEEEEEEeEEEEe-cceEEEEEeCCCCCEe
Confidence 9999988899999999999999999998 9999987641 2245689999999999998 4578999999999999
Q ss_pred cEEEEeEEEEecC
Q 041224 359 DIKINNIDITHSD 371 (400)
Q Consensus 359 ni~~~nv~i~~~~ 371 (400)
||+|+||+++...
T Consensus 402 ~I~~~nv~i~~~~ 414 (448)
T 3jur_A 402 DILISDTIIEGAK 414 (448)
T ss_dssp EEEEEEEEEESCS
T ss_pred eEEEEEEEEEccc
Confidence 9999999998654
No 2
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=3e-62 Score=486.79 Aligned_cols=333 Identities=23% Similarity=0.436 Sum_probs=293.3
Q ss_pred CeeEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCCEEEeee-eeecCCCCCCCeEEEEeEEEEccCC--
Q 041224 30 ASSVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNP-VSFQGPCKSSSINVQIQGNIVAPHS-- 106 (400)
Q Consensus 30 ~~~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~-l~l~~~~ks~~v~l~~~g~i~~~~~-- 106 (400)
.+.++|+||||++||++|||+|||+||+ +|+ ++++|+||+| +|++++ |.|+++ + +++|+++|+++...+
T Consensus 18 ~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~---~g~~V~vP~G-~Yli~~~l~l~g~--s-~v~l~l~G~~l~~~~~~ 89 (422)
T 1rmg_A 18 TKTCNILSYGAVADNSTDVGPAITSAWA-ACK---SGGLVYIPSG-NYALNTWVTLTGG--S-ATAIQLDGIIYRTGTAS 89 (422)
T ss_dssp HCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHT---BTCEEEECSS-EEEECSCEEEESC--E-EEEEEECSEEEECCCCS
T ss_pred CcEEEeeeccccCCCCcccHHHHHHHHH-HCC---CCCEEEECCC-eEEeCCceeecCC--C-eEEEEEcCcEEcccCCC
Confidence 4589999999999999999999999995 786 3789999999 999985 999753 6 899999998887654
Q ss_pred CCccCCCccccEEEeeeeceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEeecceEE
Q 041224 107 SAWDGHDKKKWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSI 186 (400)
Q Consensus 107 ~~~~~~~~~~~i~~~~~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i 186 (400)
..| ..++...+++++.|+|.|+|||+|+.||.... .||+++++.+|+|++|++++++|++.|++++..|+|++|
T Consensus 90 ~~~-----~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~~~-~rp~~i~~~~~~nv~I~~iti~nsp~~~i~i~~~~nv~I 163 (422)
T 1rmg_A 90 GNM-----IAVTDTTDFELFSSTSKGAVQGFGYVYHAEGT-YGARILRLTDVTHFSVHDIILVDAPAFHFTMDTCSDGEV 163 (422)
T ss_dssp SEE-----EEEEEEEEEEEECSSSCCEEECCTHHHHTTTC-CCCEEEEEEEEEEEEEEEEEEECCSSCSEEEEEEEEEEE
T ss_pred Cce-----EEEEecCceeEEeeccCEEEECCcchhhcCCC-CCceEEEEcccceEEEECeEEECCCceEEEEeCcCCEEE
Confidence 222 12345566777778899999999999997543 499999999999999999999999999999999999999
Q ss_pred eceEEECCCCCCCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCCceEEEeccCCCCCCCCEEEEEE
Q 041224 187 SNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLGANGGTSIVEDVHV 266 (400)
Q Consensus 187 ~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~i~ni~v 266 (400)
+|++|.+ .+.+++|||++.+ +||+|+||+|+++||||+++++++||+|+||+|..+||++|||+|. .+.++||+|
T Consensus 164 ~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~---~~~v~nV~v 238 (422)
T 1rmg_A 164 YNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGA---DTDVTDIVY 238 (422)
T ss_dssp EEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECT---TEEEEEEEE
T ss_pred EeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCC---CCcEEEEEE
Confidence 9999999 4557999999999 9999999999999999999999999999999999999999999864 368999999
Q ss_pred EeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCC---
Q 041224 267 RDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSST--- 343 (400)
Q Consensus 267 ~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~--- 343 (400)
+||++.++.+|++||++.+ .|.++||+|+||+++++++||.|++.|+... ......+.|+||+|+||+++...
T Consensus 239 ~n~~~~~~~~Gi~Ikt~~g-~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~---~~~~~~~~i~nI~~~nI~gt~~~g~~ 314 (422)
T 1rmg_A 239 RNVYTWSSNQMYMIKSNGG-SGTVSNVLLENFIGHGNAYSLDIDGYWSSMT---AVAGDGVQLNNITVKNWKGTEANGAT 314 (422)
T ss_dssp EEEEEESSSCSEEEEEBBC-CEEEEEEEEEEEEEEEESCSEEEETBCTTSC---CBSSSCCEEEEEEEEEEEEEESCTTT
T ss_pred EeEEEeccceEEEEEecCC-CcEEEEEEEEeEEEECccccEEEEeeccCCC---cccCCCceEEEEEEEeEEEEeccccc
Confidence 9999999999999999754 5899999999999999999999999986532 22346678999999999999853
Q ss_pred cceEEEEecCCCCeecEEEEeEEEEecCCCCCcceeeecceec
Q 041224 344 EEAVQLSCSESVGCTDIKINNIDITHSDSGKDTRASCINAHGE 386 (400)
Q Consensus 344 ~~~i~i~~~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~~~ 386 (400)
..++.+.|.++.+|+||+|+||+++.++ +....+.|+|+.|.
T Consensus 315 ~~~i~i~~~~~~~~~ni~l~nv~i~~~~-g~~~~~~C~n~~g~ 356 (422)
T 1rmg_A 315 RPPIRVVCSDTAPCTDLTLEDIAIWTES-GSSELYLCRSAYGS 356 (422)
T ss_dssp SCSEEEECBTTBCEEEEEEEEEEEEESS-SSCEEEEEESEEEE
T ss_pred ceeEEEEeCCCCcEeeEEEEeEEEEcCC-CCccceEEECCCcc
Confidence 3579999999999999999999999988 66677999999864
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=5.3e-61 Score=472.75 Aligned_cols=326 Identities=25% Similarity=0.425 Sum_probs=289.4
Q ss_pred CCCeeEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecC---CCEEEeeeeeecCCCCCCCeEEEEeE--EEE
Q 041224 28 SYASSVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPA---GKTFLLNPVSFQGPCKSSSINVQIQG--NIV 102 (400)
Q Consensus 28 ~~~~~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~---G~~Y~~~~l~l~~~~ks~~v~l~~~g--~i~ 102 (400)
..+.+|+|++|| .+|||+|||+|| ++|++ |++|+||+ | +|++++|.| +| +++|++++ +|+
T Consensus 10 ~~p~~~~v~~~G-----~~~dT~aiq~Ai-~ac~~---Gg~v~~~~~~~g-~yl~g~i~l----~s-~vtL~l~~Ga~L~ 74 (376)
T 1bhe_A 10 KTPSSCTTLKAD-----SSTATSTIQKAL-NNCDQ---GKAVRLSAGSTS-VFLSGPLSL----PS-GVSLLIDKGVTLR 74 (376)
T ss_dssp CCCCEEEEEECC-----SSBCHHHHHHHH-TTCCT---TCEEEEECSSSS-EEEESCEEC----CT-TCEEEECTTCEEE
T ss_pred CCCCeEEECCCC-----CCccHHHHHHHH-HHhcc---CCcEEEECCCCc-eEEEeEEEE----CC-CCEEEECCCeEEE
Confidence 334579999986 479999999999 57875 45666664 8 999999999 68 99999994 999
Q ss_pred ccCC-CCccCC------------CccccEEEeeeeceEEecCeeEeCCC--------ccccccC--------CCCCCceE
Q 041224 103 APHS-SAWDGH------------DKKKWLLFSNVNGLTVNGNGKIDGKG--------ASWWSNK--------QNQRPTAL 153 (400)
Q Consensus 103 ~~~~-~~~~~~------------~~~~~i~~~~~~nv~I~G~G~idg~g--------~~~~~~~--------~~~rp~~i 153 (400)
++.+ .+|+.. ...+||.+.+++||+|+|.|+|||+| +.||... ...||++|
T Consensus 75 ~s~~~~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i 154 (376)
T 1bhe_A 75 AVNNAKSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLI 154 (376)
T ss_dssp ECSCSGGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSE
T ss_pred eCCCHHHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEE
Confidence 9998 888642 23579999999999999999999998 5789631 23589999
Q ss_pred EEeeeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEecCCceEEEcC----
Q 041224 154 SFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATGDDCVAIGT---- 229 (400)
Q Consensus 154 ~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s---- 229 (400)
.|.+|+|++|++++++|+|+|++++..|++++|++++|.++..++|+||||+.+|+||+|+||+|.++||||++++
T Consensus 155 ~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~~ 234 (376)
T 1bhe_A 155 QINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGR 234 (376)
T ss_dssp EEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTS
T ss_pred EEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCCC
Confidence 9999999999999999999999999999999999999999888899999999999999999999999999999995
Q ss_pred -CceeEEEEeeEEcCCceEEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCCccEE
Q 041224 230 -DTSNIAVTGVICGPGHGISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSDNPII 308 (400)
Q Consensus 230 -~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~i~ 308 (400)
+++||+|+||+|..+||++|||+. . .++||+|+||+|.++.+|++||+|++++|.|+||+|+||+|+++++||.
T Consensus 235 ~~s~nI~I~n~~~~~ghGisiGSe~----~-~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni~~~~v~~~i~ 309 (376)
T 1bhe_A 235 AETRNISILHNDFGTGHGMSIGSET----M-GVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIV 309 (376)
T ss_dssp CCEEEEEEEEEEECSSSCEEEEEEE----S-SEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEEE
T ss_pred CCceEEEEEeeEEEccccEEeccCC----c-cEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeEEEeCCCceEE
Confidence 699999999999999999999984 2 8999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCCcceEEEEecCCCCeecEEEEeEEEEecCCCCCcceeeeccee
Q 041224 309 IDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSSTEEAVQLSCSESVGCTDIKINNIDITHSDSGKDTRASCINAHG 385 (400)
Q Consensus 309 i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~i~i~~~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~~ 385 (400)
|++.|+... +...+.|+||+|+||+++... ++.+.|.++.||++|+|+||+++... .+.|+|+..
T Consensus 310 i~~~y~~~~-----~~~~~~i~ni~~~ni~gt~~~--~~~l~g~~~~~~~~I~l~nv~l~~~~-----~~~~~~~~~ 374 (376)
T 1bhe_A 310 IDTVYEKKE-----GSNVPDWSDITFKDVTSETKG--VVVLNGENAKKPIEVTMKNVKLTSDS-----TWQIKNVNV 374 (376)
T ss_dssp EETTSSCCC-----CCCCCEEEEEEEEEEEECSCC--EEEEECTTCSSCEEEEEEEEECCTTC-----EEEEESEEE
T ss_pred EEeeccCCC-----CCcCcEEEEEEEEEEEEEecc--eEEEEeCCCCCeeeEEEEeEEEecCC-----CceEEEEEe
Confidence 999987642 234468999999999999753 68999999999999999999998654 489999864
No 4
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=2e-59 Score=457.31 Aligned_cols=320 Identities=26% Similarity=0.455 Sum_probs=278.7
Q ss_pred CeeEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeee-eecCCCCCCCeEEEEeEEEEccCCCC
Q 041224 30 ASSVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPV-SFQGPCKSSSINVQIQGNIVAPHSSA 108 (400)
Q Consensus 30 ~~~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l-~l~~~~ks~~v~l~~~g~i~~~~~~~ 108 (400)
.++++|++ ++|||+|+ ++|+.. ++++|+||+| +|+. | .| ++ +++|+++|++.+.. ..
T Consensus 27 ~~~Ctv~~-----------~~aiq~ai-~~c~~~-~g~~v~vP~G-~~l~--l~~l----~~-~~~l~~~g~~~~~~-~~ 84 (362)
T 1czf_A 27 RDSCTFTT-----------AAAAKAGK-AKCSTI-TLNNIEVPAG-TTLD--LTGL----TS-GTKVIFEGTTTFQY-EE 84 (362)
T ss_dssp -CEEEESS-----------HHHHHHHG-GGCSEE-EEESCEECTT-CCEE--ECSC----CT-TCEEEEESEEEECC-CC
T ss_pred CCEEEECC-----------HHHHHHHH-HHhhcc-CCCEEEECCC-EEEE--eecc----CC-CeEEEEeCcEEecc-cc
Confidence 35688866 68999999 678765 6789999999 7763 3 34 46 89999999887522 56
Q ss_pred ccCCCccccEEEeeeeceEEec--CeeEeCCCccccccC---CCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEeecc
Q 041224 109 WDGHDKKKWLLFSNVNGLTVNG--NGKIDGKGASWWSNK---QNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYGCND 183 (400)
Q Consensus 109 ~~~~~~~~~i~~~~~~nv~I~G--~G~idg~g~~~~~~~---~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~n 183 (400)
|. ++||.+.+ +||+|+| .|+|||+|+.||+.. ...||++++|.+|+|++|++++++|+|+|++++. |+|
T Consensus 85 w~----g~~i~~~~-~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~n 158 (362)
T 1czf_A 85 WA----GPLISMSG-EHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQ-AND 158 (362)
T ss_dssp SC----CCSEEEEE-ESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEE-CSS
T ss_pred CC----CcEEEEeC-ccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCccEEEEe-eCC
Confidence 75 57898855 9999999 699999999999853 3478999999999999999999999999999999 999
Q ss_pred eEEeceEEECCC-C---CCCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCCceEEEeccCCCCCCC
Q 041224 184 VSISNLKIIAPE-S---SPNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLGANGGTS 259 (400)
Q Consensus 184 v~i~~~~I~~~~-~---~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~ 259 (400)
++|+|++|.++. + ++|+||||+.+|+||+|+||+|+++||||++++ .+||+|+||+|.++||++|||+|.. +.+
T Consensus 159 v~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~ 236 (362)
T 1czf_A 159 ITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS-GENIWFTGGTCIGGHGLSIGSVGDR-SNN 236 (362)
T ss_dssp EEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEECSS-SCC
T ss_pred EEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC-CeEEEEEEEEEeCCceeEEeecccc-CCC
Confidence 999999999963 3 789999999999999999999999999999999 5999999999999999999999765 568
Q ss_pred CEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCC-ccEEEEeeecCCCCCCCCCCcceeEEeEEEEeEE
Q 041224 260 IVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSD-NPIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQ 338 (400)
Q Consensus 260 ~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~ 338 (400)
.++||+|+||++.++.+|++||+|+++.|.|+||+|+||+|+++. +||.|++.|+... ++..+...++|+||+|+||+
T Consensus 237 ~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~-~~~~p~~~~~i~nI~~~ni~ 315 (362)
T 1czf_A 237 VVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIVMSGISDYGVVIQQDYEDGK-PTGKPTNGVTIQDVKLESVT 315 (362)
T ss_dssp EEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTE-ECSCCCSSEEEEEEEEEEEE
T ss_pred CEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEEEECcccccEEEEEecCCCC-CCCCCCCCceEEEEEEEEEE
Confidence 999999999999999999999999998999999999999999997 7999999997642 23333456899999999999
Q ss_pred EecCC-cceEEEEecCCCCeecEEEEeEEEEecCCCCCcceeeeccee
Q 041224 339 GTSST-EEAVQLSCSESVGCTDIKINNIDITHSDSGKDTRASCINAHG 385 (400)
Q Consensus 339 ~~~~~-~~~i~i~~~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~~ 385 (400)
++... ..++.+.|. +.||+||+|+||+++.. .....|.|++.
T Consensus 316 gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~~----~~~~~C~n~~~ 358 (362)
T 1czf_A 316 GSVDSGATEIYLLCG-SGSCSDWTWDDVKVTGG----KKSTACKNFPS 358 (362)
T ss_dssp EEECTTSEEEEEECC-TTTEEEEEEEEEEEESS----BCCSCCBSCCT
T ss_pred EEecCCceEEEEEeC-CCcCcCEEEEeEEEEcC----CCcccCcCCCC
Confidence 99876 568999997 78999999999999843 23568999884
No 5
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=9.4e-59 Score=481.08 Aligned_cols=355 Identities=19% Similarity=0.276 Sum_probs=290.0
Q ss_pred cCCCCeeEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeeeeecCCCCCCCeEEEEe--EEEEc
Q 041224 26 FPSYASSVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPCKSSSINVQIQ--GNIVA 103 (400)
Q Consensus 26 ~~~~~~~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l~l~~~~ks~~v~l~~~--g~i~~ 103 (400)
+++++..+||+||||+|||.+|||+|||+|| ++|+. |++|+||+| +|++++|.| +| +++|+++ |+|++
T Consensus 150 T~~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai-~~c~~---g~~v~vP~G-~y~~g~i~l----ks-~v~L~l~~gatL~~ 219 (608)
T 2uvf_A 150 TSAKPQIVNVRDFGAIDDGKTLNTKAIQQAI-DSCKP---GCRVEIPAG-TYKSGALWL----KS-DMTLNLQAGAILLG 219 (608)
T ss_dssp CCCCCCEEEGGGGTCCSSSSCCCHHHHHHHH-HTCCT---TEEEEECSE-EEEECCEEC----CS-SEEEEECTTEEEEE
T ss_pred cccCCCEEecccccccCCCCccCHHHHHHHH-HhcCC---CCEEEECCC-ceEecceec----cC-ceEEEecCCcEEEe
Confidence 3556778999999999999999999999999 57864 689999999 999999999 68 9999994 89999
Q ss_pred cCC-CCccCC----------CccccEEEee--------eeceEEecCeeEeCCCccccccC-------------------
Q 041224 104 PHS-SAWDGH----------DKKKWLLFSN--------VNGLTVNGNGKIDGKGASWWSNK------------------- 145 (400)
Q Consensus 104 ~~~-~~~~~~----------~~~~~i~~~~--------~~nv~I~G~G~idg~g~~~~~~~------------------- 145 (400)
+.+ .+|+.. ...++|.+.+ ++||+|+|.|+|||+|..||+..
T Consensus 220 s~d~~~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~ 299 (608)
T 2uvf_A 220 SENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNS 299 (608)
T ss_dssp CSCGGGSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTT
T ss_pred cCCHHHCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCcccccccccccccccccccccccccccc
Confidence 998 888631 1135888887 79999999999999998886310
Q ss_pred ---------------------------CCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCCCCC
Q 041224 146 ---------------------------QNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSP 198 (400)
Q Consensus 146 ---------------------------~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~~~ 198 (400)
+..||++|.|.+|+|++|++++++|+++|++++..|+|++|++++|.. .+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~ 378 (608)
T 2uvf_A 300 KVHEDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDAN 378 (608)
T ss_dssp THHHHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCT
T ss_pred cccccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCC
Confidence 013899999999999999999999999999999999999999999865 4578
Q ss_pred CCCeeeecCcccEEEEeeEEecCCceEEEcCC----------ceeEEEEeeEEcCCceE-EEeccCCCCCCCCEEEEEEE
Q 041224 199 NTDGIDITHSSNVQIRDCTIATGDDCVAIGTD----------TSNIAVTGVICGPGHGI-SIGSLGANGGTSIVEDVHVR 267 (400)
Q Consensus 199 n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~----------~~ni~i~n~~~~~~~gi-~igs~g~~~~~~~i~ni~v~ 267 (400)
|+|||++.+|+||+|+||+|.++||||+++++ ++||+|+||+|.++||+ .|||+ ..+.++||+|+
T Consensus 379 NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI~v~ 454 (608)
T 2uvf_A 379 NGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDILAE 454 (608)
T ss_dssp TCCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEEEEE
T ss_pred CCCeEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEEEEE
Confidence 99999999999999999999999999999975 79999999999999985 58996 57899999999
Q ss_pred eeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecC-CccEEEEeeecCCCCC--CCCCCcceeEEeEEEEeEEEecCCc
Q 041224 268 DCTFKGTKNGARIKTWQGGSGHARRISFERIRLESS-DNPIIIDQYYCGPNGD--CKNQTSAVKVSDVSYIGFQGTSSTE 344 (400)
Q Consensus 268 N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~-~~~i~i~~~~~~~~~~--~~~~~~~~~i~nItf~nI~~~~~~~ 344 (400)
||+|.++.+|++||++.+++|.|+||+|+||+|+++ ++||.|++.|+..... .......+.++||+|+||++.....
T Consensus 455 n~~~~~t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~g 534 (608)
T 2uvf_A 455 NNVMYLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTG 534 (608)
T ss_dssp SCEEESCSEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECS
T ss_pred eEEEECCCceEEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeec
Confidence 999999999999999998899999999999999999 5999999999764320 0111122346666666666554322
Q ss_pred --ceEEEE--ecCCCCeecEEEEeEEEEecCCC-------------------CCcceeeecceecccceeecCC
Q 041224 345 --EAVQLS--CSESVGCTDIKINNIDITHSDSG-------------------KDTRASCINAHGELYGQLVPSV 395 (400)
Q Consensus 345 --~~i~i~--~~~~~~~~ni~~~nv~i~~~~~~-------------------~~~~~~c~~~~~~~~~~~~~~~ 395 (400)
.++.+. |.+..||+||+|+||+++...+. ....+.|.++.+.....+.|.|
T Consensus 535 t~~~i~i~g~~~~~~p~~ni~~~nv~i~~~~~~~i~~~~~~~~~nv~i~~~~~~~~~~~~~v~~~~~~~v~~~p 608 (608)
T 2uvf_A 535 KNPSIEIKGDTANKAWHRLVHVNNVQLNNVTPTAISDLRDSEFNKVTFTELRGDTPWHFSEVKNVKVDGKPVAP 608 (608)
T ss_dssp SSCSEEEECBGGGTBCEEEEEEEEEEEESCCCCEEESEESCEEEEEEEESCSSSCSCCEESCBSCCBTTCCC--
T ss_pred eEEeEEEEEEcCCCCccccEEEEeEEEEccCceeEEeccCceEEeEEEeCCCCCccEEEEeeeceEEcceEeCC
Confidence 344554 45567899999999998875521 1134777777776553255543
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=2.8e-57 Score=439.59 Aligned_cols=316 Identities=27% Similarity=0.497 Sum_probs=276.4
Q ss_pred chHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeee-eecCCCCCCCeEEEEeEEEEccCCCCccCCCccccEEEeeeec
Q 041224 47 DDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPV-SFQGPCKSSSINVQIQGNIVAPHSSAWDGHDKKKWLLFSNVNG 125 (400)
Q Consensus 47 ddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l-~l~~~~ks~~v~l~~~g~i~~~~~~~~~~~~~~~~i~~~~~~n 125 (400)
.||+|||+|| ++|++. ++++|+||+| +|+. | .| ++ +++|+++|++.+.. ..|. ++|+.+.+ +|
T Consensus 6 ~dt~aiq~ai-~~c~~~-~g~~v~vP~G-~~~~--l~~l----~~-~~~l~~~g~~~~~~-~~w~----g~~i~~~~-~n 69 (339)
T 2iq7_A 6 TDAAAAIKGK-ASCTSI-ILNGIVVPAG-TTLD--MTGL----KS-GTTVTFQGKTTFGY-KEWE----GPLISFSG-TN 69 (339)
T ss_dssp SCHHHHHHHG-GGCSEE-EEESCEECTT-CCEE--ECSC----CT-TCEEEEESEEEECC-CCSC----CCSEEEEE-ES
T ss_pred CCHHHHHHHH-HHhhcc-CCCeEEECCC-EEEE--eecc----CC-CeEEEEeCcEEccc-cccc----CcEEEEEc-cc
Confidence 5799999999 678765 6789999999 8864 3 44 56 89999999887532 5665 57888876 99
Q ss_pred eEEecC--eeEeCCCccccccC----CCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCCC---
Q 041224 126 LTVNGN--GKIDGKGASWWSNK----QNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPES--- 196 (400)
Q Consensus 126 v~I~G~--G~idg~g~~~~~~~----~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~--- 196 (400)
|+|+|. |+|||+|+.||+.. ...||+++.|.+|+|++|++++++|+|.|++++..|++++|++++|.++..
T Consensus 70 v~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~ 149 (339)
T 2iq7_A 70 ININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSA 149 (339)
T ss_dssp CEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGT
T ss_pred EEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCccccc
Confidence 999997 79999999999743 346899999999999999999999999999999999999999999999743
Q ss_pred -CCCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCCceEEEeccCCCCCCCCEEEEEEEeeEEeCCc
Q 041224 197 -SPNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLGANGGTSIVEDVHVRDCTFKGTK 275 (400)
Q Consensus 197 -~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~i~ni~v~N~~~~~~~ 275 (400)
++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||+|.. ..+.++||+|+||+|.++.
T Consensus 150 ~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~~~~ 227 (339)
T 2iq7_A 150 GGHNTDAFDVGSSTGVYISGANVKNQDDCLAINS-GTNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIVNSD 227 (339)
T ss_dssp TCCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEESCS
T ss_pred cCCCCCcEEEcCcceEEEEecEEecCCCEEEEcC-CccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCC
Confidence 789999999999999999999999999999999 5999999999999999999998765 5689999999999999999
Q ss_pred ceEEEEeecCCCeeEEeEEEEeEEEecCCc-cEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCC-cceEEEEecC
Q 041224 276 NGARIKTWQGGSGHARRISFERIRLESSDN-PIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSST-EEAVQLSCSE 353 (400)
Q Consensus 276 ~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~-~~~i~i~~~~ 353 (400)
+|++||+|.++.|.|+||+|+||+|+++++ ||.|++.|+... ++..+...+.|+||+|+||+++... ..++.+.|.
T Consensus 228 ~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~ni~~~ni~gt~~~~~~~~~i~c~- 305 (339)
T 2iq7_A 228 NGVRIKTVSGATGSVSGVTYSGITLSNIAKYGIVIEQDYENGS-PTGTPTNGVPITGLTLSKITGSVASSGTNVYILCA- 305 (339)
T ss_dssp EEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTSEEEEEECC-
T ss_pred cEEEEEEeCCCCeEEEEEEEEeEEccCcccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEeC-
Confidence 999999999888999999999999999986 999999997632 2333345678999999999999876 568999994
Q ss_pred CCCeecEEEEeEEEEecCCCCCcceeeecceec
Q 041224 354 SVGCTDIKINNIDITHSDSGKDTRASCINAHGE 386 (400)
Q Consensus 354 ~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~~~ 386 (400)
..||+||+|+||+++... ....|.|++..
T Consensus 306 ~~~c~ni~~~nv~i~~~~----~~~~C~n~~~~ 334 (339)
T 2iq7_A 306 SGACSNWKWSGVSVTGGK----KSTKCSNIPSG 334 (339)
T ss_dssp TTCEEEEEEEEEEEESSB----CCSCCBCCCTT
T ss_pred CCcEecEEEEeEEEEcCC----CcccccCCCCC
Confidence 889999999999998432 35689999853
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=3.6e-57 Score=438.37 Aligned_cols=315 Identities=28% Similarity=0.510 Sum_probs=275.4
Q ss_pred cchHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeee-eecCCCCCCCeEEEEeEEEEccCCCCccCCCccccEEEeeee
Q 041224 46 TDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPV-SFQGPCKSSSINVQIQGNIVAPHSSAWDGHDKKKWLLFSNVN 124 (400)
Q Consensus 46 tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l-~l~~~~ks~~v~l~~~g~i~~~~~~~~~~~~~~~~i~~~~~~ 124 (400)
..||+|||+|| ++|++. ++++|+||+| +|+. | .| ++ +++|+++|++.+.. ..|. ++|+.+.. +
T Consensus 5 ~~~t~aiq~ai-~~c~~~-gg~~v~vP~G-~~~~--l~~l----~~-~~~l~~~g~~~~~~-~~w~----g~li~~~~-~ 68 (336)
T 1nhc_A 5 FTSASEASESI-SSCSDV-VLSSIEVPAG-ETLD--LSDA----AD-GSTITFEGTTSFGY-KEWK----GPLIRFGG-K 68 (336)
T ss_dssp ESSHHHHHHHG-GGCSEE-EEESCEECTT-CCEE--CTTC----CT-TCEEEEESEEEECC-CCSC----CCSEECCE-E
T ss_pred ECCHHHHHHHH-HHhhcc-CCCeEEECCC-EEEE--eecc----CC-CeEEEEeceEEccc-cccc----CcEEEEec-C
Confidence 36899999999 678765 6789999999 8762 3 34 46 89999999887521 5565 57888765 9
Q ss_pred ceEEecC--eeEeCCCccccccC----CCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCCC--
Q 041224 125 GLTVNGN--GKIDGKGASWWSNK----QNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPES-- 196 (400)
Q Consensus 125 nv~I~G~--G~idg~g~~~~~~~----~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~-- 196 (400)
||+|+|. |+|||+|+.||+.. ...||+++.|.+|+|++|++++++|+|.|++++. |++++|++++|.++..
T Consensus 69 nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~ 147 (336)
T 1nhc_A 69 DLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDD 147 (336)
T ss_dssp SCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHH
T ss_pred CEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCccc
Confidence 9999997 79999999999853 2468999999999999999999999999999999 9999999999999753
Q ss_pred --CCCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCCceEEEeccCCCCCCCCEEEEEEEeeEEeCC
Q 041224 197 --SPNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLGANGGTSIVEDVHVRDCTFKGT 274 (400)
Q Consensus 197 --~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~i~ni~v~N~~~~~~ 274 (400)
++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||+|.+ ..+.++||+|+||++.++
T Consensus 148 ~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t 225 (336)
T 1nhc_A 148 NGGHNTDGFDISESTGVYISGATVKNQDDCIAINS-GESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTVSNS 225 (336)
T ss_dssp HTCCSCCSEEECSCEEEEEESCEEESSSEEEEESS-EEEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEEESC
T ss_pred ccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC-CeEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEEECC
Confidence 789999999999999999999999999999999 5999999999999999999998765 468999999999999999
Q ss_pred cceEEEEeecCCCeeEEeEEEEeEEEecCCc-cEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCC-cceEEEEec
Q 041224 275 KNGARIKTWQGGSGHARRISFERIRLESSDN-PIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSST-EEAVQLSCS 352 (400)
Q Consensus 275 ~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~-~~~i~i~~~ 352 (400)
.+|++||+|.++.|.|+||+|+||+|+++++ ||.|++.|+... ++..+...++|+||+|+||+++... ..++.+.|.
T Consensus 226 ~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~ 304 (336)
T 1nhc_A 226 ANGVRIKTIYKETGDVSEITYSNIQLSGITDYGIVIEQDYENGS-PTGTPSTGIPITDVTVDGVTGTLEDDATQVYILCG 304 (336)
T ss_dssp SEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTCEEEEEECC
T ss_pred CcEEEEEEECCCCCEEeeeEEeeEEeeccccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEcC
Confidence 9999999999889999999999999999986 999999998742 2333345678999999999999876 568999994
Q ss_pred CCCCeecEEEEeEEEEecCCCCCcceeeeccee
Q 041224 353 ESVGCTDIKINNIDITHSDSGKDTRASCINAHG 385 (400)
Q Consensus 353 ~~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~~ 385 (400)
..||+||+|+||+++... ....|.|+++
T Consensus 305 -~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 332 (336)
T 1nhc_A 305 -DGSCSDWTWSGVDLSGGK----TSDKCENVPS 332 (336)
T ss_dssp -TTCEEEEEEEEEEEESSB----CCSCCBSCCT
T ss_pred -CCcEecEEEEeEEEEcCC----CCcccCCCCC
Confidence 899999999999998532 3568999885
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=1.4e-56 Score=435.92 Aligned_cols=316 Identities=25% Similarity=0.457 Sum_probs=274.9
Q ss_pred chHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeee-eecCCCCCCCeEEEEeEEEEccCCCCccCCCccccEEEeeeec
Q 041224 47 DDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPV-SFQGPCKSSSINVQIQGNIVAPHSSAWDGHDKKKWLLFSNVNG 125 (400)
Q Consensus 47 ddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l-~l~~~~ks~~v~l~~~g~i~~~~~~~~~~~~~~~~i~~~~~~n 125 (400)
.||+|||+|+ ++|+.. ++++|+||+| +|+. | .| ++ +++|+++|++.+.. ..|. ..+||.+.+ +|
T Consensus 6 ~~t~aiq~ai-~~c~~~-gg~~v~vP~G-~~l~--l~~l----~~-~~~l~~~g~~~~~~-~~w~---~g~~i~~~~-~n 70 (349)
T 1hg8_A 6 TEYSGLATAV-SSCKNI-VLNGFQVPTG-KQLD--LSSL----QN-DSTVTFKGTTTFAT-TADN---DFNPIVISG-SN 70 (349)
T ss_dssp SSGGGHHHHH-HHCSEE-EECCCEECTT-CCEE--ETTC----CT-TCEEEECSEEEECC-CCCT---TCCSEEEEE-ES
T ss_pred CCHHHHHHHH-Hhcccc-CCCEEEECCC-EEEE--eecc----CC-CeEEEEcCceeccc-cccc---CCceEEEEC-cc
Confidence 3789999999 678765 6789999999 8864 3 34 46 89999999886522 5662 258898865 99
Q ss_pred eEEec--CeeEeCCCccccccCC----C-CCCceEEE-e-eeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCC-
Q 041224 126 LTVNG--NGKIDGKGASWWSNKQ----N-QRPTALSF-G-SCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPE- 195 (400)
Q Consensus 126 v~I~G--~G~idg~g~~~~~~~~----~-~rp~~i~~-~-~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~- 195 (400)
|+|+| .|+|||+|+.||+... . .||++|.| . .|+|++|++++++|+|.|++++..|++++|++++|.++.
T Consensus 71 i~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~ 150 (349)
T 1hg8_A 71 ITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAG 150 (349)
T ss_dssp CEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGG
T ss_pred EEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCC
Confidence 99999 6999999999998532 2 58999999 7 788999999999999999999999999999999999852
Q ss_pred C-----------CCCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCCceEEEeccCCCCCCCCEEEE
Q 041224 196 S-----------SPNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLGANGGTSIVEDV 264 (400)
Q Consensus 196 ~-----------~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~i~ni 264 (400)
+ ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||+|.. ..+.++||
T Consensus 151 ~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV 228 (349)
T 1hg8_A 151 DKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGK-SDNVVDGV 228 (349)
T ss_dssp SSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS-EEEEEEEEEEEESSCCEEEEEESSS-SCCEEEEE
T ss_pred ccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC-CeEEEEEeEEEeCCcceEEcccccc-ccCCEEEE
Confidence 2 589999999999999999999999999999999 6999999999999999999999866 56899999
Q ss_pred EEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCC-ccEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCC
Q 041224 265 HVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSD-NPIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSST 343 (400)
Q Consensus 265 ~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~ 343 (400)
+|+||+|.++.+|++||+|+++.|.|+||+|+||+|++++ +||.|++.|+... ++..+...+.|+||+|+||+++...
T Consensus 229 ~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~-~~~~p~~~~~i~~I~~~ni~gt~~~ 307 (349)
T 1hg8_A 229 QFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNGG-PTGKPTNGVKISNIKFIKVTGTVAS 307 (349)
T ss_dssp EEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSS-BCSCCCSSEEEEEEEEEEEEEEECT
T ss_pred EEEEEEEECCCcEEEEEecCCCCccccceEEEEEEEEccccccEEEEeeccCCC-CCCcccCCceEEEEEEEeEEEEeCC
Confidence 9999999999999999999988899999999999999997 6999999998742 2334446689999999999999876
Q ss_pred -cceEEEEecCCCCeecEEEEeEEEEecCCCCCcceeeeccee
Q 041224 344 -EEAVQLSCSESVGCTDIKINNIDITHSDSGKDTRASCINAHG 385 (400)
Q Consensus 344 -~~~i~i~~~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~~ 385 (400)
..++.+.|. +.||+||+|+||+++... ....|.|+++
T Consensus 308 ~~~~v~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 345 (349)
T 1hg8_A 308 SAQDWFILCG-DGSCSGFTFSGNAITGGG----KTSSCNYPTN 345 (349)
T ss_dssp TSEEEEEECC-SSCEEEEEEESCEEECCS----SCCEECSSSS
T ss_pred CCEEEEEEeC-CCcCcCEEEEeEEEEcCC----CCeeeeCCCC
Confidence 568999998 699999999999998533 3468999876
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=1.6e-56 Score=434.14 Aligned_cols=312 Identities=28% Similarity=0.500 Sum_probs=273.0
Q ss_pred hHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeee-eecCCCCCCCeEEEEeEEEEccCCCCccCCCccccEEEeeeece
Q 041224 48 DSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPV-SFQGPCKSSSINVQIQGNIVAPHSSAWDGHDKKKWLLFSNVNGL 126 (400)
Q Consensus 48 dt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l-~l~~~~ks~~v~l~~~g~i~~~~~~~~~~~~~~~~i~~~~~~nv 126 (400)
-++|||+|| ++|+.. ++++|+||+| +|+. | .| ++ +++|+++|++.+.. ..|. ++|+.+.+ +||
T Consensus 11 g~~aiq~ai-~~c~~~-gg~~v~vP~G-~~l~--l~~l----~~-~~~l~~~g~~~~~~-~~w~----g~li~~~~-~nv 74 (339)
T 1ia5_A 11 GASSASKSK-TSCSTI-VLSNVAVPSG-TTLD--LTKL----ND-GTHVIFSGETTFGY-KEWS----GPLISVSG-SDL 74 (339)
T ss_dssp HHHHHHHHG-GGCSEE-EEESCEECTT-CCEE--ECSC----CT-TCEEEEESEEEECC-CCSC----CCSEEEEE-ESC
T ss_pred chHHHHHHH-HHhhcc-CCCeEEECCC-EEEE--eecc----CC-CeEEEEeCcEEccc-cccc----CcEEEEEc-CcE
Confidence 367999999 678865 6789999999 8863 3 44 56 99999999887531 5565 57888876 999
Q ss_pred EEecC--eeEeCCCccccccC----CCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCC-C---
Q 041224 127 TVNGN--GKIDGKGASWWSNK----QNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPE-S--- 196 (400)
Q Consensus 127 ~I~G~--G~idg~g~~~~~~~----~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~-~--- 196 (400)
+|+|. |+|||+|+.||+.. ...||+++.|.+|+|++|++++++|+|.|++++..|++++|++++|.++. +
T Consensus 75 ~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~ 154 (339)
T 1ia5_A 75 TITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNG 154 (339)
T ss_dssp EEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTT
T ss_pred EEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCcccccc
Confidence 99997 79999999999853 24689999999999999999999999999999999999999999999973 3
Q ss_pred CCCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCCceEEEeccCCCCCCCCEEEEEEEeeEEeCCcc
Q 041224 197 SPNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLGANGGTSIVEDVHVRDCTFKGTKN 276 (400)
Q Consensus 197 ~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~ 276 (400)
++|+|||++.+|+||+|+||+|+++||||++++ .+||+|+||+|.++||++|||+|.. ..+.++||+|+||+|.++.+
T Consensus 155 ~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~ 232 (339)
T 1ia5_A 155 GHNTDAFDIGTSTYVTISGATVYNQDDCVAVNS-GENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFVDSTIINSDN 232 (339)
T ss_dssp CCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEEEEEEESCSE
T ss_pred CCCCCcEEecCCceEEEEeeEEEcCCCeEEEeC-CeEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCc
Confidence 689999999999999999999999999999999 5999999999999999999998765 46899999999999999999
Q ss_pred eEEEEeecCCCeeEEeEEEEeEEEecCCc-cEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCC-cceEEEEecCC
Q 041224 277 GARIKTWQGGSGHARRISFERIRLESSDN-PIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSST-EEAVQLSCSES 354 (400)
Q Consensus 277 gi~i~~~~~~~g~i~nI~f~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~-~~~i~i~~~~~ 354 (400)
|++||+|.++.|.|+||+|+||+|++++. ||.|++.|... +..+...+.|+||+|+||+++... ..++.+.|. .
T Consensus 233 girIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~---~~~p~~~~~i~ni~~~ni~gt~~~~~~~v~i~c~-~ 308 (339)
T 1ia5_A 233 GVRIKTNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYGDT---SSTPTTGVPITDFVLDNVHGSVVSSGTNILISCG-S 308 (339)
T ss_dssp EEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEETCT---TSCCCSSSCEEEEEEEEEEEEECTTSEEEEEECC-T
T ss_pred EEEEEEeCCCCcEEEeeEEEEEEEECcccccEEEEccCCCC---CCCCcCCceEEEEEEEeEEEEeCCCCEEEEEEeC-C
Confidence 99999999888999999999999999986 99999999322 233345678999999999999876 568999995 8
Q ss_pred CCeecEEEEeEEEEecCCCCCcceeeeccee
Q 041224 355 VGCTDIKINNIDITHSDSGKDTRASCINAHG 385 (400)
Q Consensus 355 ~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~~ 385 (400)
.||+||+|+||+++.. .....|+|++.
T Consensus 309 ~~c~ni~~~nv~i~~~----~~~~~C~n~~~ 335 (339)
T 1ia5_A 309 GSCSDWTWTDVSVSGG----KTSSKCTNVPS 335 (339)
T ss_dssp TCEEEEEEEEEEEESS----BCCSCCBSCCT
T ss_pred CCEecEEEEeEEEECC----CCCeeeECCCC
Confidence 8999999999999843 23568999875
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=1e-56 Score=433.90 Aligned_cols=305 Identities=22% Similarity=0.390 Sum_probs=265.1
Q ss_pred HHHHHHHHHHHhcCCCCCceEEecCCCEEEeeeeeecCCCCCCCeEEEEeEEEEccCCCCccCCCccccEEEeeeeceEE
Q 041224 49 SQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPCKSSSINVQIQGNIVAPHSSAWDGHDKKKWLLFSNVNGLTV 128 (400)
Q Consensus 49 t~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l~l~~~~ks~~v~l~~~g~i~~~~~~~~~~~~~~~~i~~~~~~nv~I 128 (400)
++|||+ + ++|++. ++++|+||+| +|+ .|.| ++ +++|+++|++.+.. .+|. ++||.+. .+|++|
T Consensus 8 ~~aiq~-i-~aC~~~-gg~~v~vP~G-~~l--~l~l----~~-~~~l~~~g~~~~~~-~~w~----~~~i~~~-~~ni~I 70 (335)
T 1k5c_A 8 VDDAKD-I-AGCSAV-TLNGFTVPAG-NTL--VLNP----DK-GATVTMAGDITFAK-TTLD----GPLFTID-GTGINF 70 (335)
T ss_dssp TTGGGG-C-TTCSEE-EECCEEECTT-CCE--EECC----CT-TCEEEECSCEEECC-CCSC----SCSEEEE-EEEEEE
T ss_pred HHHhHH-H-HhcccC-CCCEEEECCC-EEE--EEEe----CC-CeEEEEeccEeccc-cccc----CcEEEEE-ccCEEE
Confidence 689999 8 789875 6789999999 776 3555 57 99999999887622 6676 5789887 499999
Q ss_pred ec-CeeEeCCCccccccC----CCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEeecc-eEEeceEEECCC-C----C
Q 041224 129 NG-NGKIDGKGASWWSNK----QNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYGCND-VSISNLKIIAPE-S----S 197 (400)
Q Consensus 129 ~G-~G~idg~g~~~~~~~----~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~n-v~i~~~~I~~~~-~----~ 197 (400)
+| .|+|||+|+.||+.. ...||+++.|.+|+ ++|++++++|+|+|++++..|++ |+|+|++|.++. + +
T Consensus 71 ~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~ 149 (335)
T 1k5c_A 71 VGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLG 149 (335)
T ss_dssp ECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCC
T ss_pred EeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccC
Confidence 99 699999999999753 24699999999999 99999999999999999999999 999999999974 3 7
Q ss_pred CCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCCceEEEeccCCCCCCCCEEEEEEEeeEEeCCcce
Q 041224 198 PNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLGANGGTSIVEDVHVRDCTFKGTKNG 277 (400)
Q Consensus 198 ~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~g 277 (400)
+|+||||+ +|+||+|+||+|+++||||++|++ +||+|+||+|..+||++|||++. .+.++||+|+||+|.++.+|
T Consensus 150 ~NtDGidi-~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t~~g 224 (335)
T 1k5c_A 150 HNTDGFDV-SANNVTIQNCIVKNQDDCIAINDG-NNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRSMYG 224 (335)
T ss_dssp CSCCSEEE-ECSSEEEESCEEESSSCSEEEEEE-EEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEEEEE
T ss_pred CCCCeEcc-cCCeEEEEeeEEEcCCCEEEeeCC-eeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECCCce
Confidence 89999999 999999999999999999999995 99999999999999999999963 58999999999999999999
Q ss_pred EEEEeecCCC-eeEEeEEEEeEEEecCC-ccEEEEeeecCCCCCCCCCCcceeEEeEEEEeEE--EecCC-cceEEEEec
Q 041224 278 ARIKTWQGGS-GHARRISFERIRLESSD-NPIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQ--GTSST-EEAVQLSCS 352 (400)
Q Consensus 278 i~i~~~~~~~-g~i~nI~f~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~--~~~~~-~~~i~i~~~ 352 (400)
+|||+|+++. |.|+||+|+||+|++++ +||.|++.|... +..+.+.+.|+||+|+||+ ++... ..++.+.|.
T Consensus 225 irIKt~~g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~---~~~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~ 301 (335)
T 1k5c_A 225 VRIKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYPDD---VGNPGTGAPFSDVNFTGGATTIKVNNAATRVTVECG 301 (335)
T ss_dssp EEEEEETTCCSCEEEEEEEESCEEEEEEEEEEEEEEEETSS---SSSCCSSSCEEEEEECSSCEEEEECTTCEEEEEECS
T ss_pred EEEEEeCCCCcceEeeeEEEEEEEEccccccEEEEeeCCCC---CCCCCCCceEEEEEEEEEEEeeEEcCCceEEEEECC
Confidence 9999999988 99999999999999997 699999999322 2233456789999999999 77654 568999997
Q ss_pred CCCCeecEEEEeEEEEecCCCCCcceeeecce
Q 041224 353 ESVGCTDIKINNIDITHSDSGKDTRASCINAH 384 (400)
Q Consensus 353 ~~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~ 384 (400)
+ ||+||+|+||+++..+ .. ...|.++.
T Consensus 302 ~--~c~ni~~~nv~i~~~~-~~--~~~~~~~~ 328 (335)
T 1k5c_A 302 N--CSGNWNWSQLTVTGGK-AG--TIKSDKAK 328 (335)
T ss_dssp S--EESEEEEEEEEEESSB-CC--CEECTTCE
T ss_pred C--cCCCEEEEeEEEEcCC-CC--ceEeEEeE
Confidence 5 9999999999998765 22 34555443
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=9.9e-50 Score=400.73 Aligned_cols=293 Identities=17% Similarity=0.143 Sum_probs=249.3
Q ss_pred CeeEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCCEEEe------------eeeeecCCCCCCCeEEEE
Q 041224 30 ASSVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLL------------NPVSFQGPCKSSSINVQI 97 (400)
Q Consensus 30 ~~~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~------------~~l~l~~~~ks~~v~l~~ 97 (400)
+..+||+||||++| ||+|||+||+ +|++. ++++|+||+|++|++ ++|.| || +++|++
T Consensus 49 ~~~~nV~dfGA~gD----dT~AIqkAId-aCs~~-GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L----kS-nVtL~L 117 (600)
T 2x6w_A 49 DPSGNVIQPGPNVD----SRQYLQAAID-YVSSN-GGGTITIPAGYTWYLGSYGVGGIAGHSGIIQL----RS-NVNLNI 117 (600)
T ss_dssp CTTSCBCCCCTTCC----CHHHHHHHHH-HHHHT-TCEEEEECTTCEEEECSCCCGGGGGGTEEEEC----CT-TEEEEE
T ss_pred CcEEeeecCCCCcc----CHHHHHHHHH-Hhhhc-CCCEEEECCCCEEEecccccccccccccceEE----cC-ceEEee
Confidence 46899999999999 9999999995 67655 689999999989999 89999 68 999999
Q ss_pred eEEEEccCC-CCccC-----CCccccEEEeeeeceEEecCeeEeCCCccccccCCC--CCCceEEEeeeCcEEEEceEEe
Q 041224 98 QGNIVAPHS-SAWDG-----HDKKKWLLFSNVNGLTVNGNGKIDGKGASWWSNKQN--QRPTALSFGSCNNLVFRGLTHV 169 (400)
Q Consensus 98 ~g~i~~~~~-~~~~~-----~~~~~~i~~~~~~nv~I~G~G~idg~g~~~~~~~~~--~rp~~i~~~~~~nv~i~~v~i~ 169 (400)
+|+|+++.+ .+|+. ....++|.+.+++||+|+|.|+|||+|+.||..... .||+ +.+.+|+ |++++++
T Consensus 118 dGtL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~~~~~RP~-l~f~~c~---I~GITi~ 193 (600)
T 2x6w_A 118 EGRIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQLRNGVAF-GRSYNCS---VTGITFQ 193 (600)
T ss_dssp CSEEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTCCEEEEEC-CSEEEEE---EESCEEE
T ss_pred ecEEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccccCCCCCE-EEEeeeE---EeCeEEE
Confidence 999999999 88863 112345888899999999999999999999974321 3687 8899987 9999999
Q ss_pred CC-CCceEEE---EeecceEEeceE----EECCCCCCCCCeeeecCcccEEEEeeEEecCCceEEE-cCCce-eEEEEee
Q 041224 170 DS-PGNHISV---YGCNDVSISNLK----IIAPESSPNTDGIDITHSSNVQIRDCTIATGDDCVAI-GTDTS-NIAVTGV 239 (400)
Q Consensus 170 ns-~~~~i~~---~~~~nv~i~~~~----I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i-~s~~~-ni~i~n~ 239 (400)
|+ |.|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.++||||++ |++.. ++.++
T Consensus 194 NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~ni~~e-- 261 (600)
T 2x6w_A 194 NGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARNIACS-- 261 (600)
T ss_dssp SCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHHHEEE--
T ss_pred CCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCCeEEE--
Confidence 99 9999999 999999999999 776 6899999 99999999999999999 99864 47777
Q ss_pred EEcCCc-eEEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCCccEEEEeeecCCCC
Q 041224 240 ICGPGH-GISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSDNPIIIDQYYCGPNG 318 (400)
Q Consensus 240 ~~~~~~-gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~ 318 (400)
.|..+| |++|||+ ..+.++||+|+| +||++.+++|.|+||+|+||+|++++.++.+++..
T Consensus 262 ~~~~GHgGISIGSe----~~ggV~NV~V~N----------rIKt~~G~GG~V~NItfeNI~m~nV~~~I~i~q~~----- 322 (600)
T 2x6w_A 262 VQLHQHDTFYRGST----VNGYCRGAYVVM----------HAAEAAGAGSYAYNMQVENNIAVIYGQFVILGSDV----- 322 (600)
T ss_dssp EEECSSSEEEESCE----EEEESEEEEEEE----------CGGGCTTTCSEEEEEEEESCEEEESSEEEEEEECB-----
T ss_pred EEcCCCCcEEeccc----ccCcEEEEEEEE----------EEEeecCCCceEEEEEEEEEEEEccceEEEeCCCC-----
Confidence 566777 8999997 467899999999 56777778899999999999999999888887641
Q ss_pred CCCCCCcceeEEeEEEEeEEEecCCc------ceEEEEecC-------CCCeecEEEEeEEEEecC
Q 041224 319 DCKNQTSAVKVSDVSYIGFQGTSSTE------EAVQLSCSE-------SVGCTDIKINNIDITHSD 371 (400)
Q Consensus 319 ~~~~~~~~~~i~nItf~nI~~~~~~~------~~i~i~~~~-------~~~~~ni~~~nv~i~~~~ 371 (400)
...+.+.|+||+|+||+++.... .+.++.+.+ +.+|++|+|+|+++..++
T Consensus 323 ---~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~~~~~ 385 (600)
T 2x6w_A 323 ---TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNSFYAPA 385 (600)
T ss_dssp ---CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCEEECCT
T ss_pred ---CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceEEEcCC
Confidence 22356689999999999997543 236666654 468999999999997755
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=4.8e-43 Score=357.38 Aligned_cols=299 Identities=14% Similarity=0.217 Sum_probs=238.2
Q ss_pred EeeecCccCCCCcchHHHHHHHHHHHhcCC------------------------CCCceEEecCCCEEEe---eeeeecC
Q 041224 34 SVIQFGAVGDGETDDSQAFLKAWKSICGSK------------------------SNAAPLLVPAGKTFLL---NPVSFQG 86 (400)
Q Consensus 34 nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~------------------------~gg~~v~iP~G~~Y~~---~~l~l~~ 86 (400)
|...|||++||.++.+.+|. ++.+++... .++++|+||+| +|++ |+|.|
T Consensus 144 n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G-~yl~g~~G~i~l-- 219 (549)
T 1x0c_A 144 DDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPG-VYYFTGHDHMVL-- 219 (549)
T ss_dssp GGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSE-EEECCTTCCEEE--
T ss_pred CCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCe-EEecCCceEEEe--
Confidence 33469999999999999887 553333321 26889999999 9997 58999
Q ss_pred CCCCCCeE-EEEe-EE-EEccCCCCccCCCccccEEEeeeeceEEecCeeEeCCCccccccC-------CCCCCceEEE-
Q 041224 87 PCKSSSIN-VQIQ-GN-IVAPHSSAWDGHDKKKWLLFSNVNGLTVNGNGKIDGKGASWWSNK-------QNQRPTALSF- 155 (400)
Q Consensus 87 ~~ks~~v~-l~~~-g~-i~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~idg~g~~~~~~~-------~~~rp~~i~~- 155 (400)
|| +++ |+++ |. |++ +++...+++|++|+|.|+|||+|..||... +..||+++.|
T Consensus 220 --~s-~~~~L~l~~GA~L~g------------s~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~ 284 (549)
T 1x0c_A 220 --SS-SVTWVYFAPGAYVKG------------AVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMW 284 (549)
T ss_dssp --CT-TCCEEEECTTEEEES------------CEEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSE
T ss_pred --cC-CCCeEecCCCCEEEE------------EEEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEe
Confidence 68 999 9998 54 442 233333889999999999999999998521 1247888888
Q ss_pred -----eeeCcEEEEceEEeCCCCceEEEE-ee-cc--eEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEecCCceEE
Q 041224 156 -----GSCNNLVFRGLTHVDSPGNHISVY-GC-ND--VSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATGDDCVA 226 (400)
Q Consensus 156 -----~~~~nv~i~~v~i~ns~~~~i~~~-~~-~n--v~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~ 226 (400)
.+|+|++|+|++++|+|+|++++. .| ++ ++|+++++.++. .+|+||||+. +||+|+||+|+++||||+
T Consensus 285 ~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIa 361 (549)
T 1x0c_A 285 RGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLK 361 (549)
T ss_dssp EEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEE
T ss_pred eccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEE
Confidence 999999999999999999999966 56 69 999999999853 3689999998 999999999999999999
Q ss_pred EcCCceeEEEEeeEEcC--Cce-EEEeccCCCCCCCCEEEEEEEeeEEeCCcc------eEEEEe---e--c------CC
Q 041224 227 IGTDTSNIAVTGVICGP--GHG-ISIGSLGANGGTSIVEDVHVRDCTFKGTKN------GARIKT---W--Q------GG 286 (400)
Q Consensus 227 i~s~~~ni~i~n~~~~~--~~g-i~igs~g~~~~~~~i~ni~v~N~~~~~~~~------gi~i~~---~--~------~~ 286 (400)
+++ +||+|+||+|+. +++ |++||. .+.++||+|+||+|.++.. +..|++ | . +.
T Consensus 362 Iks--~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~ 434 (549)
T 1x0c_A 362 MYY--SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNH 434 (549)
T ss_dssp CCS--SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCC
T ss_pred ECC--CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCC
Confidence 998 999999999975 456 999984 5899999999999998753 445776 2 1 12
Q ss_pred CeeEEeEEEEeEEEecCC-ccEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCC-----cceEEEEecCC------
Q 041224 287 SGHARRISFERIRLESSD-NPIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSST-----EEAVQLSCSES------ 354 (400)
Q Consensus 287 ~g~i~nI~f~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~-----~~~i~i~~~~~------ 354 (400)
.|.|+||+|+||+|+++. +++.+.+.+. .+..+|+||+|+||++++.. ..+..+.+.+.
T Consensus 435 ~G~i~nI~f~NI~i~nv~~~g~~~~~~~g---------~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~~~~~~ 505 (549)
T 1x0c_A 435 STGNSNMTVRNITWSNFRAEGSSSALFRI---------NPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQ 505 (549)
T ss_dssp CCBEEEEEEEEEEEEEEEEEEEECCSEEE---------CCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBTTTCCB
T ss_pred CceEccEEEEeEEEEeEEEeceEEeeecC---------CCCCcCccEEEEEEEEEccccccccccceEEeCCCccccccc
Confidence 689999999999999987 6655443321 13346999999999987764 33455655433
Q ss_pred CCeecEEEEeEEEEec
Q 041224 355 VGCTDIKINNIDITHS 370 (400)
Q Consensus 355 ~~~~ni~~~nv~i~~~ 370 (400)
.+|+||+|+||++..+
T Consensus 506 ~~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 506 ITVTDFSIEGFTVGNT 521 (549)
T ss_dssp CCEEEEEEEEEEETTE
T ss_pred eeeeeEEEEeEEEeCe
Confidence 7899999999999644
No 13
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=2.2e-40 Score=337.43 Aligned_cols=262 Identities=16% Similarity=0.170 Sum_probs=215.1
Q ss_pred CCceEEecCCCEEEe-------------eeeeecCCCCCCCeE-EEEe-EEEEccCCCCccCCCccccEEEeeeeceEEe
Q 041224 65 NAAPLLVPAGKTFLL-------------NPVSFQGPCKSSSIN-VQIQ-GNIVAPHSSAWDGHDKKKWLLFSNVNGLTVN 129 (400)
Q Consensus 65 gg~~v~iP~G~~Y~~-------------~~l~l~~~~ks~~v~-l~~~-g~i~~~~~~~~~~~~~~~~i~~~~~~nv~I~ 129 (400)
|+++||||+| +|++ |+|.| || +++ |+++ |..+ ..++.+.+++|++|+
T Consensus 230 ggg~v~vP~G-~yl~~~~~~~gpc~~g~G~i~l----kS-nvt~L~L~~GA~l------------~g~i~~~~~~nv~It 291 (574)
T 1ogo_X 230 AKSILYFPPG-VYWMNQDQSGNSGKLGSNHIRL----NS-NTYWVYLAPGAYV------------KGAIEYFTKQNFYAT 291 (574)
T ss_dssp SSSEEEECSE-EEEECBCTTCCBSCSSSCCEEC----CT-TCCEEEECTTEEE------------ESCEEECCSSCEEEE
T ss_pred CCCEEEECCc-EEEEeccccCCcccccceEEEe----cC-CCceEEecCCcEE------------EccEEEeCceeEEEE
Confidence 6889999999 9999 57998 68 998 9998 5433 234788999999999
Q ss_pred cCeeEeCCCccccccC------CCCCCceEEEe------eeCcEEEEceEEeCCCCceEEEEeecce--EEeceEEECCC
Q 041224 130 GNGKIDGKGASWWSNK------QNQRPTALSFG------SCNNLVFRGLTHVDSPGNHISVYGCNDV--SISNLKIIAPE 195 (400)
Q Consensus 130 G~G~idg~g~~~~~~~------~~~rp~~i~~~------~~~nv~i~~v~i~ns~~~~i~~~~~~nv--~i~~~~I~~~~ 195 (400)
|.|+|||+|..||... +..||+++.|. +|+|++|+|++++|+|+|++++..|+++ +|+|+++.++.
T Consensus 292 G~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~ 371 (574)
T 1ogo_X 292 GHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAF 371 (574)
T ss_dssp SSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCC
T ss_pred eCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCC
Confidence 9999999999999642 22478888887 9999999999999999999999999999 99999998743
Q ss_pred CCCCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCC--ce-EEEeccCCCCCCCCEEEEEEEeeEEe
Q 041224 196 SSPNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPG--HG-ISIGSLGANGGTSIVEDVHVRDCTFK 272 (400)
Q Consensus 196 ~~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~--~g-i~igs~g~~~~~~~i~ni~v~N~~~~ 272 (400)
..++||||+. +||+|+||+|+++||||++++ +||+|+||+++.+ ++ ++|||. .+.++||+|+||+|.
T Consensus 372 -~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS~-----~g~V~NV~v~N~~i~ 441 (574)
T 1ogo_X 372 -FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGWT-----SRDISGVTIDTLNVI 441 (574)
T ss_dssp -STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCSS-----CCCEEEEEEEEEEEE
T ss_pred -CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcCC-----CCcEEEEEEEeEEEE
Confidence 3469999998 999999999999999999998 9999999998754 56 999983 589999999999998
Q ss_pred CCcc--------eEEEEee---------cCCCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCCCcceeEEeEEEE
Q 041224 273 GTKN--------GARIKTW---------QGGSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVSDVSYI 335 (400)
Q Consensus 273 ~~~~--------gi~i~~~---------~~~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nItf~ 335 (400)
+... +..+.+. ..+.| | ||+|+||+++++++++ +... +...|+||+|+
T Consensus 442 ~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g-V-NI~f~NI~~~~v~~~i-i~i~------------p~~~I~nI~~~ 506 (574)
T 1ogo_X 442 HTRYIKSETVVPSAIIGASPFYASGMSPDSRKS-I-SMTVSNVVCEGLCPSL-FRIT------------PLQNYKNFVVK 506 (574)
T ss_dssp ECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE-E-EEEEEEEEECSSBCEE-EEEC------------CSEEEEEEEEE
T ss_pred CCcccceeccccceeeccccccccccccCCCce-E-EEEEEeEEEEceeEee-EEEC------------CCCCEEEEEEE
Confidence 8653 2322211 01224 8 9999999999999885 4321 23469999999
Q ss_pred eEEEec------CCcceEEEEecCCCCeecEEEEeEEEEec
Q 041224 336 GFQGTS------STEEAVQLSCSESVGCTDIKINNIDITHS 370 (400)
Q Consensus 336 nI~~~~------~~~~~i~i~~~~~~~~~ni~~~nv~i~~~ 370 (400)
||++++ ....+..+.+.+ .+|+||+|+||++...
T Consensus 507 NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 507 NVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp EEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETTE
T ss_pred eEEEeCccccccccccceeEecCC-CccceEEEEeEEEeCE
Confidence 999876 223345566666 8999999999999543
No 14
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=5.5e-39 Score=324.50 Aligned_cols=267 Identities=22% Similarity=0.244 Sum_probs=203.5
Q ss_pred CCeeEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCCEEEe-eeeeecCCCCCCCeEEEEeE----EEEc
Q 041224 29 YASSVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLL-NPVSFQGPCKSSSINVQIQG----NIVA 103 (400)
Q Consensus 29 ~~~~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~-~~l~l~~~~ks~~v~l~~~g----~i~~ 103 (400)
+++.+||+||||+|||.+|||+|||+||++ |++|+||+| +|++ ++|.| ++ +++|++++ +|.+
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-------Gg~V~iP~G-tYlis~~l~l----~s-nv~L~g~g~~~t~L~~ 85 (609)
T 3gq8_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES-------GFPVYVPYG-TFMVSRGIKL----PS-NTVLTGAGKRNAVIRF 85 (609)
T ss_dssp CSSSEEGGGGTCCCEEEEECHHHHHHHHHT-------SSCEEECSE-EEEESSCEEE----CS-SEEEEESCTTTEEEEE
T ss_pred CCcEEEeEecccCCCCCchhHHHHHHHHHc-------CCEEEECCc-cEEEeCceEE----CC-CcEEEEeeCCCCEEEe
Confidence 467899999999999999999999999953 269999999 9999 89999 57 99999974 6776
Q ss_pred cCC-CCccCCCccccEEEeeeeceEEecCeeEeCCCccccc---cCCCCCCceEEEeeeCcEEEEceEEeCCCCceEEEE
Q 041224 104 PHS-SAWDGHDKKKWLLFSNVNGLTVNGNGKIDGKGASWWS---NKQNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVY 179 (400)
Q Consensus 104 ~~~-~~~~~~~~~~~i~~~~~~nv~I~G~G~idg~g~~~~~---~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~ 179 (400)
+.+ ..|.. -..+++.+.+++||+|+|. +|||+++.||. ..+..||++|.|.+|+|++|++++++|+|.+++.+
T Consensus 86 ~~~~p~~~~-li~~lI~a~~~~NItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I- 162 (609)
T 3gq8_A 86 MDSVGRGES-LMYNENVTTGNENIFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDI- 162 (609)
T ss_dssp CTTCCSSCC-SEEESCTTTCCEEEEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEE-
T ss_pred CCCCCCCCc-eeeeeeeecccccEEEEee-EEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEE-
Confidence 655 43321 0123456778999999995 99999985443 12347999999999999999999999999865544
Q ss_pred eecceEEeceEEECCCCCCCCCeeeecC------cccEEEEeeEEe-cCCceEEEcCCceeEEEEeeEEcC------Cce
Q 041224 180 GCNDVSISNLKIIAPESSPNTDGIDITH------SSNVQIRDCTIA-TGDDCVAIGTDTSNIAVTGVICGP------GHG 246 (400)
Q Consensus 180 ~~~nv~i~~~~I~~~~~~~n~DGi~i~~------s~nV~I~n~~i~-~~dD~i~i~s~~~ni~i~n~~~~~------~~g 246 (400)
.++.. | ||+++++ |+||+|+||+|+ ++||||++++ ++||+|+||+|++ ++|
T Consensus 163 ------------~~~~~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp~G~S~~~G 226 (609)
T 3gq8_A 163 ------------TCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNG 226 (609)
T ss_dssp ------------ECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSCSSCCS
T ss_pred ------------eCCCC--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECCCCCCCccc
Confidence 44332 2 6677666 999999999995 5999999988 9999999999943 368
Q ss_pred EEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeE-EEecCC-ccEEEEeeecCCCCCCCCCC
Q 041224 247 ISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRISFERI-RLESSD-NPIIIDQYYCGPNGDCKNQT 324 (400)
Q Consensus 247 i~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni-~~~~~~-~~i~i~~~~~~~~~~~~~~~ 324 (400)
++||+. .+||+|+||++.++..|++||++. ..+.++||+++|. .++++. +.+.....+.. ..+
T Consensus 227 IsIGsg--------s~NVtV~Nc~i~nt~~GIrIKt~~-~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a------~dp 291 (609)
T 3gq8_A 227 FEIDDG--------SRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRSYNFRHIGHHAA------TAP 291 (609)
T ss_dssp EEECTT--------CEEEEEESEEEESSSEEEEEEECT-TSCCCEEEEEEEEEEESCSEEEEEEETTSCST------TSC
T ss_pred EEccCC--------cccEEEEeeEEECCCCEEEEEecC-CCCccccEEEECCEeecCceEecceEEccccC------CCC
Confidence 999752 299999999999999999999874 4578999999984 555543 22222111111 111
Q ss_pred cceeEEeEEEEeEEEecC
Q 041224 325 SAVKVSDVSYIGFQGTSS 342 (400)
Q Consensus 325 ~~~~i~nItf~nI~~~~~ 342 (400)
...+.+||+++|+.....
T Consensus 292 ~s~~a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 292 QSVSAKNIVASNLVSIRP 309 (609)
T ss_dssp CCSSCEEEEEEEEEEESC
T ss_pred CcceecceEeecceEEee
Confidence 223456777777765543
No 15
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=1.7e-38 Score=316.85 Aligned_cols=300 Identities=16% Similarity=0.168 Sum_probs=221.9
Q ss_pred CCCCeeEE-eeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeeeeecCCCCCCCeEEEEe--EEEEc
Q 041224 27 PSYASSVS-VIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPCKSSSINVQIQ--GNIVA 103 (400)
Q Consensus 27 ~~~~~~~n-v~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l~l~~~~ks~~v~l~~~--g~i~~ 103 (400)
..+...++ |+||||+|||.+|||+|||+||+ +|++.+++++|+||+| +|++++|.| +| +++|+++ ++|.+
T Consensus 16 ~~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aid-ac~~~~ggg~V~vP~G-tYl~g~I~l----ks-~v~L~l~~GatL~~ 88 (464)
T 1h80_A 16 TQQDVNYDLVDDFGANGNDTSDDSNALQRAIN-AISRKPNGGTLLIPNG-TYHFLGIQM----KS-NVHIRVESDVIIKP 88 (464)
T ss_dssp SCCSEEEEHHHHHCCCTTSSSBCHHHHHHHHH-HHHTSTTCEEEEECSS-EEEECSEEC----CT-TEEEEECTTCEEEE
T ss_pred CCCcceeeehhccCcCCCCCchhHHHHHHHHH-HHhhccCCcEEEECCC-eEEEeeEec----cC-ceEEEEcCCcEEEe
Confidence 34667899 99999999999999999999995 5643114789999999 999999999 68 9999998 68888
Q ss_pred cCC---CCccCCCccccEEE---eeeeceEEecCe---eEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCCc
Q 041224 104 PHS---SAWDGHDKKKWLLF---SNVNGLTVNGNG---KIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPGN 174 (400)
Q Consensus 104 ~~~---~~~~~~~~~~~i~~---~~~~nv~I~G~G---~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~~ 174 (400)
+.+ ..|+ ++.+ .+++|++|+|.| ++||+|.. ..+|+++.|.+|+|++|++++++| .|
T Consensus 89 s~~td~~~y~------~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~------~~rp~~i~~~~~~Nv~I~gIti~n--~w 154 (464)
T 1h80_A 89 TWNGDGKNHR------LFEVGVNNIVRNFSFQGLGNGFLVDFKDSR------DKNLAVFKLGDVRNYKISNFTIDD--NK 154 (464)
T ss_dssp CCCTTCSCEE------EEEESSSSCEEEEEEEECTTCEEEECTTCS------CCBEEEEEECSEEEEEEEEEEEEC--CS
T ss_pred ccCCCcccCC------ceEeecccCccceEEECcCcceEEeCCCCC------CCCceEEEEEeeccEEEeeeEEec--cc
Confidence 763 3442 3333 678999999999 99998863 247899999999999999999999 56
Q ss_pred eEEEEeecceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEecCCceEE--EcCCceeEEEEeeEEcCCceEEEecc
Q 041224 175 HISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATGDDCVA--IGTDTSNIAVTGVICGPGHGISIGSL 252 (400)
Q Consensus 175 ~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~--i~s~~~ni~i~n~~~~~~~gi~igs~ 252 (400)
.++ .|.++. + .|+||+++ .|+||+|+||+|.++||++. ...+++||+|+||+|.+++|++|++.
T Consensus 155 ~ih--~s~~V~-----i------~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIrIktg 220 (464)
T 1h80_A 155 TIF--ASILVD-----V------TERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALRMETD 220 (464)
T ss_dssp CBS--CSEEEC-----E------EEETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEESSEEEEEECC
T ss_pred eEe--eceeee-----e------ecCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEECCCEEEEEeC
Confidence 543 332221 2 15899998 88999999999999998775 23458999999999999889999764
Q ss_pred CC---CCCCCCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCCCcceeE
Q 041224 253 GA---NGGTSIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKV 329 (400)
Q Consensus 253 g~---~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i 329 (400)
+. ....+.++||+|+||+|.+...+++|++. .+.++||+|+||+++++..++.+++.|++.-. ......
T Consensus 221 ~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~p~---~~~isnItfeNI~~t~~~~aI~i~q~y~~~fd-----~~~~~~ 292 (464)
T 1h80_A 221 NLLMKNYKQGGIRNIFADNIRCSKGLAAVMFGPH---FMKNGDVQVTNVSSVSCGSAVRSDSGFVELFS-----PTDEVH 292 (464)
T ss_dssp CHHHHHHTCCEEEEEEEEEEEEESSSEEEEEECT---TCBCCCEEEEEEEEESSSCSEEECCCCCEECC-----------
T ss_pred CceeccCCCCcEEEEEEEeEEEECCceeEEEeCC---CceEeEEEEEEEEEEccceeEEEecCcccccC-----cccccc
Confidence 10 11357899999999999999999999853 25789999999999999999999988865321 111145
Q ss_pred EeEEEEeEE------Eec---------CCcceEEEEec-------------CCCCeecEEEEeEEEEe
Q 041224 330 SDVSYIGFQ------GTS---------STEEAVQLSCS-------------ESVGCTDIKINNIDITH 369 (400)
Q Consensus 330 ~nItf~nI~------~~~---------~~~~~i~i~~~-------------~~~~~~ni~~~nv~i~~ 369 (400)
.+.+|+|-. ++. ....++.+.|. +....+++.++||+++.
T Consensus 293 ~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~nv~~~~ 360 (464)
T 1h80_A 293 TRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLEYGIEPGSFGTVKVFDVTARF 360 (464)
T ss_dssp ---------------CCBCCC----------CEEBCSCHHHHHHHHHHTCCCCCBCSSEEEEEEEEEC
T ss_pred ccceeccccccccccCceeEEEeccCCcccCceEEccccceeccccccccccCCceEEEEEEEEEecc
Confidence 666666554 111 11235566554 33456778888888876
No 16
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=1.6e-38 Score=325.52 Aligned_cols=234 Identities=25% Similarity=0.307 Sum_probs=190.8
Q ss_pred CCeeEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCCEEEe-eeeeecCCCCCCCeEEEEeE----EEEc
Q 041224 29 YASSVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLL-NPVSFQGPCKSSSINVQIQG----NIVA 103 (400)
Q Consensus 29 ~~~~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~-~~l~l~~~~ks~~v~l~~~g----~i~~ 103 (400)
++..+||+||||+|||++|||+|||+||++ + ++|+||+| +|++ ++|.| ++ +++|++++ +|.+
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a------G-g~V~IPaG-tYlisg~I~L----~s-nv~L~Geg~~~t~Lk~ 85 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES------G-FPVYVPYG-TFMVSRGIKL----PS-NTVLTGAGKRNAVIRF 85 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHHT------T-SCEEECSE-EEEESSCEEE----CS-SCEEEEEEEEEEEEEE
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHHc------C-CEEEECCc-cEEEEeEEEE----CC-CcEEEEecCCCCEEEe
Confidence 467899999999999999999999999953 3 69999999 9999 89999 57 99999885 5666
Q ss_pred cCC-CCccCCCccccEEEeeeeceEEecCeeEeCCCcccccc---CCCCCCceEEEeeeCcEEEEceEEeCCCCceEEEE
Q 041224 104 PHS-SAWDGHDKKKWLLFSNVNGLTVNGNGKIDGKGASWWSN---KQNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVY 179 (400)
Q Consensus 104 ~~~-~~~~~~~~~~~i~~~~~~nv~I~G~G~idg~g~~~~~~---~~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~ 179 (400)
+.+ ..|.. -..+|+.+.+++||+|+|. +|||+++.||.. .+..||++|.|.+|+|++|++++++|+|.+++.
T Consensus 86 ~~d~p~~~~-li~~lI~a~gveNItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~-- 161 (772)
T 3gqn_A 86 MDSVGRGES-LMYNENVTTGNENIFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGID-- 161 (772)
T ss_dssp CTTCCSSCC-SEEESCTTTCCEEEEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEE--
T ss_pred CCCCCCCCc-eeeeeeeccCceeEEEEee-EEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEE--
Confidence 655 43321 0123556778999999995 999999855431 234789999999999999999999999985444
Q ss_pred eecceEEeceEEECCCCCCCCCeeeecC------cccEEEEeeEEe-cCCceEEEcCCceeEEEEeeEEcC------Cce
Q 041224 180 GCNDVSISNLKIIAPESSPNTDGIDITH------SSNVQIRDCTIA-TGDDCVAIGTDTSNIAVTGVICGP------GHG 246 (400)
Q Consensus 180 ~~~nv~i~~~~I~~~~~~~n~DGi~i~~------s~nV~I~n~~i~-~~dD~i~i~s~~~ni~i~n~~~~~------~~g 246 (400)
|.++.. | ||+++++ |+||+|+||+|+ ++||||++++ ++||+|+||+|.+ ++|
T Consensus 162 -----------I~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gphG~S~~~G 226 (772)
T 3gqn_A 162 -----------ITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNG 226 (772)
T ss_dssp -----------EECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSSSSCCS
T ss_pred -----------EeCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECCCCCCCccc
Confidence 444432 3 6777766 999999999995 4999999988 9999999999943 468
Q ss_pred EEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEe-EEEecC
Q 041224 247 ISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRISFER-IRLESS 303 (400)
Q Consensus 247 i~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~n-i~~~~~ 303 (400)
++||+. .+||+|+||++.++.+|++||++ ++.+.++||.+.+ +.++++
T Consensus 227 IsIGsg--------s~NVtV~Nc~~~nT~nGIRIKt~-~~gg~v~NV~I~gnis~~dv 275 (772)
T 3gqn_A 227 FEIDDG--------SRHVVLSNNRSKGCYGGIEIKAH-GDAPAAYNISINGHMSVEDV 275 (772)
T ss_dssp EEECTT--------CEEEEEEEEEEESSSEEEEECCC-TTSCCCEEEEEEEEEEESCS
T ss_pred EEecCC--------cccEEEEceEEECCCcEEEEEEe-CCCCccccEEEECCEEeccC
Confidence 999852 29999999999999999999987 4567899999985 777664
No 17
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.97 E-value=1.6e-32 Score=262.63 Aligned_cols=213 Identities=16% Similarity=0.240 Sum_probs=165.3
Q ss_pred CeeEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCC---EEEee-eeeecCCCCCCCeEEEEeE--EEEc
Q 041224 30 ASSVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGK---TFLLN-PVSFQGPCKSSSINVQIQG--NIVA 103 (400)
Q Consensus 30 ~~~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~---~Y~~~-~l~l~~~~ks~~v~l~~~g--~i~~ 103 (400)
+..+||+||||+|||++|||+|||+||+++|+.. +|++||||+|+ +|+++ +|.| ++ +++|++++ .+..
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~-GGGtVyVPaG~~~~tYlvt~tI~L----kS-nV~L~Ge~~AtIl~ 122 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLP-SGGELFIPASNQAVGYIVGSTLLI----PG-GVNIRGVGKASQLR 122 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTST-TCEEEECCCCSSTTCEEESSCEEE----CT-TEEEECCSTTSEEE
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcC-CCeEEEECCCCcceeEEECCeEEe----cC-CeEEEEecCceEee
Confidence 4679999999999999999999999998887764 68899999995 79985 8999 68 99999883 4433
Q ss_pred cCC---CCccCCCccccEEEeeeeceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEE--eCCCCceEEE
Q 041224 104 PHS---SAWDGHDKKKWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTH--VDSPGNHISV 178 (400)
Q Consensus 104 ~~~---~~~~~~~~~~~i~~~~~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i--~ns~~~~i~~ 178 (400)
+.. .........+++.+.+++|+.|+|.|+|||++..|+......|+ .....++++.+++++. .+++.|++++
T Consensus 123 s~~~I~GtIia~~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~~~~Rq--~~~~~fdnV~Vn~Vt~~v~~Sg~WTIhP 200 (514)
T 2vbk_A 123 AKSGLTGSVLRLSYDSDTIGRYLRNIRVTGNNTCNGIDTNITAEDSVIRQ--VYGWVFDNVMVNEVETAYLMQGLWHSKF 200 (514)
T ss_dssp ECTTCCSEEEEECCCSCCSCEEEESCEEECCSSSEEEEESCCTTCSSCCC--EESEEEESCEEEEEEEEEEEESEEEEEE
T ss_pred ccccccccEEeccCCccccccCceEEEEECCCeEeCCCCCccccceeeec--cceEEeeeEEEEeEEEeEeccCcEEEeE
Confidence 221 11111122356778889999999999999977554322111222 2233467999999965 4788999999
Q ss_pred EeecceEEe-ceEEECCCCCCCCCeeeecCcccEEEEeeEEecCCceEEEcCC-----------ceeEEEEeeEEcCCce
Q 041224 179 YGCNDVSIS-NLKIIAPESSPNTDGIDITHSSNVQIRDCTIATGDDCVAIGTD-----------TSNIAVTGVICGPGHG 246 (400)
Q Consensus 179 ~~~~nv~i~-~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~-----------~~ni~i~n~~~~~~~g 246 (400)
..|++++++ ++++. .+|+||+|.||+|+.|||||++|+| ++||. ||
T Consensus 201 i~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~---------hg 258 (514)
T 2vbk_A 201 IACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR---------SE 258 (514)
T ss_dssp ESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC---------CE
T ss_pred eccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc---------cc
Confidence 999999987 55553 3799999999999999999999985 56665 64
Q ss_pred -EEEeccCCCCCCCCEEE-EEEEeeEEeCCc
Q 041224 247 -ISIGSLGANGGTSIVED-VHVRDCTFKGTK 275 (400)
Q Consensus 247 -i~igs~g~~~~~~~i~n-i~v~N~~~~~~~ 275 (400)
+.||||. ..++++| |+|++|.+.+++
T Consensus 259 av~igSE~---m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 259 AIILDSET---MCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp EEEEESSE---EEESCSEEEEESCCEEEEEE
T ss_pred cEEECchh---hcccccccEEEEeeeccCCc
Confidence 9999983 3678999 999999999874
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=1.6e-29 Score=249.07 Aligned_cols=307 Identities=16% Similarity=0.228 Sum_probs=184.5
Q ss_pred eEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCCEEEe--------eeeeecCCCCCCCeEEEEeE----
Q 041224 32 SVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLL--------NPVSFQGPCKSSSINVQIQG---- 99 (400)
Q Consensus 32 ~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~--------~~l~l~~~~ks~~v~l~~~g---- 99 (400)
.++|+||||+|||.+|||+|||+||++|++. ++++|+||+| +|++ ++|.+ ++ +++|+++|
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~--gg~~v~~p~G-~y~~~~~~~~~~g~l~~----~~-~v~l~g~g~~~t 73 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAA--GGGTVYLPAG-EYRVSAAGEPGDGCLML----KD-GVYLAGAGMGET 73 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHT--TSEEEEECSE-EEEECCCSSGGGCSEEC----CT-TEEEEESSBTTE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhc--CCCEEEECCe-EEEEcccccCCcccEEe----cC-CeEEEEcCCCCc
Confidence 5899999999999999999999999776654 5889999999 9999 47888 57 99999984
Q ss_pred EEEccCC-CCccC----CCccccEEEeeeeceEEecC-----eeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEe
Q 041224 100 NIVAPHS-SAWDG----HDKKKWLLFSNVNGLTVNGN-----GKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHV 169 (400)
Q Consensus 100 ~i~~~~~-~~~~~----~~~~~~i~~~~~~nv~I~G~-----G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ 169 (400)
+|++..+ ..++. .....-....++++++|.|. |+++| ||.... |. .+..|++++|++++++
T Consensus 74 ~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~---~~--~~~~~~nv~I~~~~i~ 144 (377)
T 2pyg_A 74 VIKLIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDG----WFNGYI---PG--GDGADRDVTIERVEVR 144 (377)
T ss_dssp EEEECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEE----EEECSC---TT--SSCCEEEEEEEEEEEE
T ss_pred EEEecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccc----eecccC---cc--ccccccceEEEeEEEE
Confidence 4455554 33321 00011113456899999997 78886 886432 11 2357999999999999
Q ss_pred CCCCceEEEEeec-ceEEeceEEECCCCCCCCCeeeecCcccEEEEee-EEecCCceEEEcCCceeEEEEeeEEcCC-ce
Q 041224 170 DSPGNHISVYGCN-DVSISNLKIIAPESSPNTDGIDITHSSNVQIRDC-TIATGDDCVAIGTDTSNIAVTGVICGPG-HG 246 (400)
Q Consensus 170 ns~~~~i~~~~~~-nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~-~i~~~dD~i~i~s~~~ni~i~n~~~~~~-~g 246 (400)
+++.|++++..|. ++.++|+.+... ..|||.+..|++++|++| .+...+|+|.+..++++++|+|+++... .+
T Consensus 145 n~~~~gi~~~~~~~~~~i~n~~~~~~----~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~g 220 (377)
T 2pyg_A 145 EMSGYGFDPHEQTINLTIRDSVAHDN----GLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNGSS 220 (377)
T ss_dssp CCSSCSEEECSSEEEEEEESCEEESC----SSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSSC
T ss_pred ecccceEEeecccCCeEEEeEEeecC----CCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECccCc
Confidence 9999999998765 678888877542 345555555555555555 2334455555544455555555555432 23
Q ss_pred EEEeccCCCCCCC-----------------------CEEEEEEEeeEEeCC-cceEEEEeecCCCeeEEeEEEEeEEEec
Q 041224 247 ISIGSLGANGGTS-----------------------IVEDVHVRDCTFKGT-KNGARIKTWQGGSGHARRISFERIRLES 302 (400)
Q Consensus 247 i~igs~g~~~~~~-----------------------~i~ni~v~N~~~~~~-~~gi~i~~~~~~~g~i~nI~f~ni~~~~ 302 (400)
+.+...+. +... .+++++|+|+++.++ ..|++|+. .++++|+|+++.+
T Consensus 221 ~~~~~~g~-~~~~~s~nv~i~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~~~~GI~i~g-------~~~~~i~~N~i~~ 292 (377)
T 2pyg_A 221 GLVVQRGL-EDLALPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHGNGSSGVRVYG-------AQDVQILDNQIHD 292 (377)
T ss_dssp SEEEECCS-SCCCCCEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEESCSSCSEEEEE-------EEEEEEESCEEES
T ss_pred eEEEeccc-cCCCCCccEEEECCEEEcCccCceEeccccCeEEECCEEECCCCceEEEec-------CCCcEEECcEEEC
Confidence 32211000 0112 245566666666555 45565542 5666666666665
Q ss_pred CCc----cEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCCcceEEEEecCCCCeecEEEEeEEEEecC
Q 041224 303 SDN----PIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSSTEEAVQLSCSESVGCTDIKINNIDITHSD 371 (400)
Q Consensus 303 ~~~----~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~i~i~~~~~~~~~ni~~~nv~i~~~~ 371 (400)
... +..+.+.|......+ .....-+++++++.++++....+.-+.... ..++++++++..+....
T Consensus 293 n~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~~~i~~N~i~g~~~~~~~i~~~~-~~~~~~~i~~n~i~~~~ 361 (377)
T 2pyg_A 293 NAQAAAVPEVLLQSFDDTAGAS---GTYYTTLNTRIEGNTISGSANSTYGIQERN-DGTDYSSLIDNDIAGVQ 361 (377)
T ss_dssp CCSSSSCCSEEEECEEETTSSS---CEEECCBCCEEESCEEECCSSCCEEEEECS-SSCBCCEEESCEEESSS
T ss_pred CcccccccceEEEEecCCCccc---eeeeeccCeEEECCEEECcCCCccceEEcc-CCCccEEEECcEEeCCc
Confidence 432 222222232211000 000012566677766666655322222211 44566777777766443
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.94 E-value=7.4e-26 Score=225.88 Aligned_cols=227 Identities=14% Similarity=0.196 Sum_probs=180.1
Q ss_pred cEEEeeeeceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCC--CCceEEEEeecceEEeceEEECC
Q 041224 117 WLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDS--PGNHISVYGCNDVSISNLKIIAP 194 (400)
Q Consensus 117 ~i~~~~~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns--~~~~i~~~~~~nv~i~~~~I~~~ 194 (400)
+|.+.+++|++|+|..+++. ++| .+++.+|+|++|++++|.++ ...++++..|+||+|+|++|.+.
T Consensus 192 ~i~~~~~~nv~i~giti~ns---p~~---------~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~g 259 (448)
T 3jur_A 192 FVQFYRCRNVLVEGVKIINS---PMW---------CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTG 259 (448)
T ss_dssp SEEEESCEEEEEESCEEESC---SSC---------SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEES
T ss_pred EEEEEcccceEEEeeEEEeC---CCc---------eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEeC
Confidence 89999999999999665543 345 49999999999999999885 34689999999999999999985
Q ss_pred CC------CCCCCeeeecC-cccEEEEeeEEe--cCCceEEEcCC----ceeEEEEeeEEcCC-ceEEEeccCCCCCCCC
Q 041224 195 ES------SPNTDGIDITH-SSNVQIRDCTIA--TGDDCVAIGTD----TSNIAVTGVICGPG-HGISIGSLGANGGTSI 260 (400)
Q Consensus 195 ~~------~~n~DGi~i~~-s~nV~I~n~~i~--~~dD~i~i~s~----~~ni~i~n~~~~~~-~gi~igs~g~~~~~~~ 260 (400)
++ +.+.||+++.. |+||+|+||+++ .+++||++++. .+||+|+||++.++ +|++|++... ..+.
T Consensus 260 DDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g--~gG~ 337 (448)
T 3jur_A 260 DDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSR--RGGY 337 (448)
T ss_dssp SEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTT--TCSE
T ss_pred CCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEcC--CCce
Confidence 43 12233433332 899999999994 45669999874 69999999999876 6999998632 3589
Q ss_pred EEEEEEEeeEEeCCcceE-EEEeecC-----CCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCCCcceeEEeEEE
Q 041224 261 VEDVHVRDCTFKGTKNGA-RIKTWQG-----GSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVSDVSY 334 (400)
Q Consensus 261 i~ni~v~N~~~~~~~~gi-~i~~~~~-----~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nItf 334 (400)
++||+|+|++|.+..+++ .|+..+. ..+.|+||+|+||+.++.+.++.+.-. +..+++||+|
T Consensus 338 v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~------------~~~p~~~I~~ 405 (448)
T 3jur_A 338 MENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL------------ENDYVKDILI 405 (448)
T ss_dssp EEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB------------TTBCEEEEEE
T ss_pred EeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC------------CCCCEeeEEE
Confidence 999999999999998887 8877542 347899999999999997788777521 2236999999
Q ss_pred EeEEEecCCcceEEEEe----cCCCCeecEEEEeEEEEec
Q 041224 335 IGFQGTSSTEEAVQLSC----SESVGCTDIKINNIDITHS 370 (400)
Q Consensus 335 ~nI~~~~~~~~~i~i~~----~~~~~~~ni~~~nv~i~~~ 370 (400)
+||+++.... +..+.. .....++||+|+||+|..+
T Consensus 406 ~nv~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~nv~ing~ 444 (448)
T 3jur_A 406 SDTIIEGAKI-SVLLEFGQLGMENVIMNGSRFEKLYIEGK 444 (448)
T ss_dssp EEEEEESCSE-EEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEcccc-ceeEeccccccccceecccEEEEEEEcCE
Confidence 9999997654 344432 3455699999999999764
No 20
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.90 E-value=2.3e-22 Score=206.41 Aligned_cols=265 Identities=16% Similarity=0.212 Sum_probs=187.6
Q ss_pred CCeeEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCC---------ceEEecCCCEEEee-eeeecCCCCCCCeEEEEe
Q 041224 29 YASSVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNA---------APLLVPAGKTFLLN-PVSFQGPCKSSSINVQIQ 98 (400)
Q Consensus 29 ~~~~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg---------~~v~iP~G~~Y~~~-~l~l~~~~ks~~v~l~~~ 98 (400)
.+..+||+||||+|||++|||+|||+||++ +++. |+ ++||||+| +|++. +|.+ ++ ++.|..+
T Consensus 46 y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~-a~~~-Gggc~~st~~~~~V~~P~G-tYlvs~tI~l----~~-~t~L~G~ 117 (758)
T 3eqn_A 46 YPVFRNVKNYGAKGDGNTDDTAAIQAAINA-GGRC-GQGCDSTTTQPALVYFPPG-TYKVSSPLVV----LY-QTQLIGD 117 (758)
T ss_dssp CCSEEEGGGGTCCCEEEEECHHHHHHHHHT-TSCS-CTTCCCCSSSCEEEEECSS-EEEESSCEEC----CT-TEEEEEC
T ss_pred CeEEEEHHHcCcCCCCCchhHHHHHHHHHH-hhhc-ccccccccccceEEEECCc-eEEEcccEEc----cC-CeEEEec
Confidence 455789999999999999999999999954 4332 22 69999999 99985 8999 57 9999988
Q ss_pred E----EEEccCCCCccCCCccccEEEeeeeceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCCc
Q 041224 99 G----NIVAPHSSAWDGHDKKKWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPGN 174 (400)
Q Consensus 99 g----~i~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~~ 174 (400)
+ +|++..+ |.+ ..+ |.+ ...+++|..||.. ....+..++|++|+ ++..++...
T Consensus 118 ~~~~pvIka~~~--F~G---~~l----------i~~-d~y~~~G~~w~~~------~~~F~r~irNlviD-~t~~~~~~~ 174 (758)
T 3eqn_A 118 AKNLPTLLAAPN--FSG---IAL----------IDA-DPYLAGGAQYYVN------QNNFFRSVRNFVID-LRQVSGSAT 174 (758)
T ss_dssp SSSCCEEEECTT--CCS---SCS----------EES-SCBCGGGCBSSCG------GGCCCEEEEEEEEE-CTTCSSCEE
T ss_pred CCCCCeEecCCC--CCC---cce----------eec-cccCCCCcccccc------ccceeeeecceEEe-ccccCCCce
Confidence 4 4554332 111 111 222 2234456778853 23455567777777 555666678
Q ss_pred eEEEEeecceEEeceEEECCCCCC-CCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCCc-eEEEecc
Q 041224 175 HISVYGCNDVSISNLKIIAPESSP-NTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGH-GISIGSL 252 (400)
Q Consensus 175 ~i~~~~~~nv~i~~~~I~~~~~~~-n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~ 252 (400)
+|++..|++..++||.|..+..+. ..+||++..+....|+|++|..++=++.++. +..+++|++|.+.. +|.+...
T Consensus 175 gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gn--QQfT~rnltF~~~~taI~~~w~ 252 (758)
T 3eqn_A 175 GIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGN--QQFTVRNLTFNNANTAINAIWN 252 (758)
T ss_dssp EEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEEC--SCCEEEEEEEESCSEEEEEEEB
T ss_pred EEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCC--cceEEeccEEeChHHHHhhhcC
Confidence 999999999999999999976543 4899999988899999999999998888854 77788888887654 6655432
Q ss_pred CCCCCCCCEEEEEEEeeEEeCCcceEEEEeecC---CCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCCCcceeE
Q 041224 253 GANGGTSIVEDVHVRDCTFKGTKNGARIKTWQG---GSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKV 329 (400)
Q Consensus 253 g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~~---~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i 329 (400)
+ ..++++++|.++.-||.+..... ....+--|++.|.+++++..++ .+.+.... .......+
T Consensus 253 --w-------gwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i--~t~~~~~~----~~~~slvl 317 (758)
T 3eqn_A 253 --W-------GWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFV--RWSGASSG----HLQGSLVL 317 (758)
T ss_dssp --S-------CEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEE--EESSCCCS----SCSSEEEE
T ss_pred --c-------eEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceE--EeccCCCC----CCcceEEE
Confidence 1 16667777777677888765211 1234778889999999877444 33332211 11245678
Q ss_pred EeEEEEeEEEec
Q 041224 330 SDVSYIGFQGTS 341 (400)
Q Consensus 330 ~nItf~nI~~~~ 341 (400)
+||.++|+....
T Consensus 318 eNv~~~nv~~~v 329 (758)
T 3eqn_A 318 NNIQLTNVPVAV 329 (758)
T ss_dssp EEEEEEEEEEEE
T ss_pred EeEEeeCCCeEE
Confidence 999988876443
No 21
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.89 E-value=1.2e-21 Score=203.07 Aligned_cols=223 Identities=13% Similarity=0.108 Sum_probs=180.2
Q ss_pred ccEEEeeeeceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeC--CC-CceEEEEeecceEEeceEEE
Q 041224 116 KWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVD--SP-GNHISVYGCNDVSISNLKII 192 (400)
Q Consensus 116 ~~i~~~~~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~n--s~-~~~i~~~~~~nv~i~~~~I~ 192 (400)
.+|.+.+++|++|+|..+.+. ++| .+++.+|+|++|+++++.+ ++ ..++++..|++|+|+|++|.
T Consensus 332 ~~i~~~~~~nv~I~giti~ns---~~~---------~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~ 399 (608)
T 2uvf_A 332 SLMTLRGVENVYLAGFTVRNP---AFH---------GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFD 399 (608)
T ss_dssp CSEEEESEEEEEEESCEEECC---SSC---------SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEE
T ss_pred eEEEEEeeeeEEEeCcEEecC---CCC---------EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEe
Confidence 479999999999999655543 344 4999999999999999875 22 46899999999999999999
Q ss_pred CCCC------CCCCCeeeecCcccEEEEeeEEecCCceEEEcC----CceeEEEEeeEEcCC-ceEEEeccCCCCCCCCE
Q 041224 193 APES------SPNTDGIDITHSSNVQIRDCTIATGDDCVAIGT----DTSNIAVTGVICGPG-HGISIGSLGANGGTSIV 261 (400)
Q Consensus 193 ~~~~------~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s----~~~ni~i~n~~~~~~-~gi~igs~g~~~~~~~i 261 (400)
+.++ +.+.||++...|+||+|+||++..+++++++++ +.+||+|+||++.++ +|++|++... ..+.+
T Consensus 400 ~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g--~gG~v 477 (608)
T 2uvf_A 400 TGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTST--IGGGA 477 (608)
T ss_dssp CSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEETT--TCCEE
T ss_pred cCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCceEEEeeecC--CCceE
Confidence 8765 345677776679999999999999999988877 369999999999987 6999998642 35789
Q ss_pred EEEEEEeeEEeCC-cceEEEEeecC------------CCeeEEeEEEEeEEEecCC---ccEEEEeeecCCCCCCCCCCc
Q 041224 262 EDVHVRDCTFKGT-KNGARIKTWQG------------GSGHARRISFERIRLESSD---NPIIIDQYYCGPNGDCKNQTS 325 (400)
Q Consensus 262 ~ni~v~N~~~~~~-~~gi~i~~~~~------------~~g~i~nI~f~ni~~~~~~---~~i~i~~~~~~~~~~~~~~~~ 325 (400)
+||+|+|++|.+. .+++.|+.... ..+.+++|+|+||+++++. .++.|... +. .
T Consensus 478 ~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~-~~---------~ 547 (608)
T 2uvf_A 478 RNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD-TA---------N 547 (608)
T ss_dssp EEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECB-GG---------G
T ss_pred ECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEE-cC---------C
Confidence 9999999999998 58999987653 2367999999999999876 46666532 21 2
Q ss_pred ceeEEeEEEEeEEEecCCcceEEEEecCCCCeecEEEEeEEEEe
Q 041224 326 AVKVSDVSYIGFQGTSSTEEAVQLSCSESVGCTDIKINNIDITH 369 (400)
Q Consensus 326 ~~~i~nItf~nI~~~~~~~~~i~i~~~~~~~~~ni~~~nv~i~~ 369 (400)
..+++||+|+||+++... +..+. .|++++|+||+++.
T Consensus 548 ~~p~~ni~~~nv~i~~~~--~~~i~-----~~~~~~~~nv~i~~ 584 (608)
T 2uvf_A 548 KAWHRLVHVNNVQLNNVT--PTAIS-----DLRDSEFNKVTFTE 584 (608)
T ss_dssp TBCEEEEEEEEEEEESCC--CCEEE-----SEESCEEEEEEEES
T ss_pred CCccccEEEEeEEEEccC--ceeEE-----eccCceEEeEEEeC
Confidence 346999999999999865 33443 48899999998874
No 22
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.89 E-value=8.3e-21 Score=183.57 Aligned_cols=203 Identities=21% Similarity=0.291 Sum_probs=164.6
Q ss_pred eEEEeeeCcEEEEce---EEeCCC--Cc-------------eEEEEeecceEEeceEEECCCCCCCCCeeeecCcccEEE
Q 041224 152 ALSFGSCNNLVFRGL---THVDSP--GN-------------HISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSNVQI 213 (400)
Q Consensus 152 ~i~~~~~~nv~i~~v---~i~ns~--~~-------------~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I 213 (400)
++.+. .+|++|++. +|.... .| .+.+..|+|++|+++++.+++ ..++++..|+||+|
T Consensus 66 li~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISVS-GSDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLTL 140 (339)
T ss_dssp SEEEE-EESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEE-cCcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC----cceEEEecccCeEE
Confidence 56665 499999997 775432 22 489999999999999999964 35799999999999
Q ss_pred EeeEEecC---------CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEEEee
Q 041224 214 RDCTIATG---------DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTW 283 (400)
Q Consensus 214 ~n~~i~~~---------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~ 283 (400)
++++|.+. .|+|.+.+ ++||+|+||++..++ +++|++. +||+|+||++.+. +|+.|.+.
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~ 209 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT-STYVTISGATVYNQDDCVAVNSG---------ENIYFSGGYCSGG-HGLSIGSV 209 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-SCEEEEEE
T ss_pred eeEEEECCccccccCCCCCcEEecC-CceEEEEeeEEEcCCCeEEEeCC---------eEEEEEeEEEECC-ceEEECcC
Confidence 99999863 57898877 899999999998775 6999762 9999999999986 69999885
Q ss_pred cC-CCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCCcceEEEEec-------C--
Q 041224 284 QG-GSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSSTEEAVQLSCS-------E-- 353 (400)
Q Consensus 284 ~~-~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~i~i~~~-------~-- 353 (400)
.. ..+.|+||+|+|+++.+..++++|+++.. ..+.++||+|+||++.....+++.++.. +
T Consensus 210 g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~ 279 (339)
T 1ia5_A 210 GGRSDNTVKNVTFVDSTIINSDNGVRIKTNID----------TTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTT 279 (339)
T ss_dssp CSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCS
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcC
Confidence 32 34899999999999999999999997622 2357999999999999876557777631 2
Q ss_pred CCCeecEEEEeEEEEecCCCCCcceee
Q 041224 354 SVGCTDIKINNIDITHSDSGKDTRASC 380 (400)
Q Consensus 354 ~~~~~ni~~~nv~i~~~~~~~~~~~~c 380 (400)
..+++||+|+||+.+......+..+.|
T Consensus 280 ~~~i~ni~~~ni~gt~~~~~~~v~i~c 306 (339)
T 1ia5_A 280 GVPITDFVLDNVHGSVVSSGTNILISC 306 (339)
T ss_dssp SSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 357999999999999876223455565
No 23
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.89 E-value=4.6e-21 Score=186.68 Aligned_cols=203 Identities=15% Similarity=0.219 Sum_probs=162.7
Q ss_pred eEEEeeeCcEEEEc---eEEeCCC--Cc------------eEEEEeecceEEeceEEECCCCCCCCCeeeecCcccEEEE
Q 041224 152 ALSFGSCNNLVFRG---LTHVDSP--GN------------HISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSNVQIR 214 (400)
Q Consensus 152 ~i~~~~~~nv~i~~---v~i~ns~--~~------------~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~ 214 (400)
++.+ +.+|++|+| -+|.... .| .+++..|+|++|+++++.+++. .++++. |+||+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~----~~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPL----MAFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSS----CCEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCc----cEEEEe-eCCEEEE
Confidence 5666 569999999 5675432 23 4899999999999999999643 359999 9999999
Q ss_pred eeEEecC---------CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEEEeec
Q 041224 215 DCTIATG---------DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTWQ 284 (400)
Q Consensus 215 n~~i~~~---------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~ 284 (400)
|++|.+. .|+|.+.+ ++||+|+||++..++ +++|++. +||+|+||++.+. +|+.|++..
T Consensus 163 ~~~I~~~~~d~~~~~NtDGidi~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDTQGGHNTDAFDVGN-SVGVNIIKPWVHNQDDCLAVNSG---------ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGTTTCCSCCSEEECS-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCccccccCCCCCceeecC-cceEEEEeeEEecCCCEEEEeCC---------eEEEEEEEEEeCC-ceeEEeecc
Confidence 9999972 57888876 899999999999875 6999862 9999999999986 699999862
Q ss_pred -CCCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCCcceEEEEec---------C-
Q 041224 285 -GGSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSSTEEAVQLSCS---------E- 353 (400)
Q Consensus 285 -~~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~i~i~~~---------~- 353 (400)
...+.|+||+|+|+++.+..++++|+++.+ ..+.++||+|+||++......++.++.. +
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTISG----------ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeCC----------CCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCC
Confidence 245899999999999999999999997522 2467999999999999875457776521 1
Q ss_pred -CCCeecEEEEeEEEEecCCCCCcceeee
Q 041224 354 -SVGCTDIKINNIDITHSDSGKDTRASCI 381 (400)
Q Consensus 354 -~~~~~ni~~~nv~i~~~~~~~~~~~~c~ 381 (400)
..+++||+|+||+.+.........+.|+
T Consensus 302 ~~~~i~nI~~~ni~gt~~~~~~~i~i~c~ 330 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDSGATEIYLLCG 330 (362)
T ss_dssp SSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred CCceEEEEEEEEEEEEecCCceEEEEEeC
Confidence 2469999999999998762234555553
No 24
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.88 E-value=1.5e-20 Score=181.84 Aligned_cols=203 Identities=17% Similarity=0.275 Sum_probs=164.2
Q ss_pred eEEEeeeCcEEEEce---EEeCCC--Cc-------------eEEEEeecceEEeceEEECCCCCCCCCeeeecCcccEEE
Q 041224 152 ALSFGSCNNLVFRGL---THVDSP--GN-------------HISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSNVQI 213 (400)
Q Consensus 152 ~i~~~~~~nv~i~~v---~i~ns~--~~-------------~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I 213 (400)
++.+.. +|++|++. +|.... .| .+.+..|+|++|+++++.+++ ..++++..|+||+|
T Consensus 62 ~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp----~~~i~i~~~~nv~i 136 (339)
T 2iq7_A 62 LISFSG-TNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP----VQAFSINSATTLGV 136 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-ccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC----cceEEEeccCCEEE
Confidence 566654 99999997 775432 23 489999999999999999964 35799999999999
Q ss_pred EeeEEecC---------CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEEEee
Q 041224 214 RDCTIATG---------DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTW 283 (400)
Q Consensus 214 ~n~~i~~~---------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~ 283 (400)
++++|.+. .|+|.+.+ ++||+|+||++..++ +++|++. +||+|+||++.+. +|+.|++.
T Consensus 137 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGSl 205 (339)
T 2iq7_A 137 YDVIIDNSAGDSAGGHNTDAFDVGS-STGVYISGANVKNQDDCLAINSG---------TNITFTGGTCSGG-HGLSIGSV 205 (339)
T ss_dssp ESCEEECGGGGGTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEE
T ss_pred EEEEEECCccccccCCCCCcEEEcC-cceEEEEecEEecCCCEEEEcCC---------ccEEEEeEEEECC-ceEEECcC
Confidence 99999873 56888887 899999999998765 7999762 9999999999986 68999985
Q ss_pred cC-CCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCCcceEEEEec---------C
Q 041224 284 QG-GSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSSTEEAVQLSCS---------E 353 (400)
Q Consensus 284 ~~-~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~i~i~~~---------~ 353 (400)
.. ..+.|+||+|+|+++.+..++++|+++.. ..+.++||+|+||++.....+++.++.. +
T Consensus 206 g~~~~~~v~nV~v~n~~~~~~~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 275 (339)
T 2iq7_A 206 GGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG----------ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTP 275 (339)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCC
Confidence 32 34899999999999999999999998622 2357999999999999876557766521 2
Q ss_pred --CCCeecEEEEeEEEEecCCCCCcceee
Q 041224 354 --SVGCTDIKINNIDITHSDSGKDTRASC 380 (400)
Q Consensus 354 --~~~~~ni~~~nv~i~~~~~~~~~~~~c 380 (400)
..+++||+|+||+.+......+..+.|
T Consensus 276 ~~~~~i~ni~~~ni~gt~~~~~~~~~i~c 304 (339)
T 2iq7_A 276 TNGVPITGLTLSKITGSVASSGTNVYILC 304 (339)
T ss_dssp CSSSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 257999999999999876233455565
No 25
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.87 E-value=3.7e-20 Score=178.89 Aligned_cols=223 Identities=18% Similarity=0.277 Sum_probs=171.2
Q ss_pred eceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEce---EEeCCC--Cc-------------eEEEEeecceE
Q 041224 124 NGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGL---THVDSP--GN-------------HISVYGCNDVS 185 (400)
Q Consensus 124 ~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v---~i~ns~--~~-------------~i~~~~~~nv~ 185 (400)
++++|.+.|.+... ...|. ..++.+ ..+|++|++. +|.... .| .+.+..|+|++
T Consensus 41 ~~~~l~~~g~~~~~-~~~w~------g~li~~-~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~ 112 (336)
T 1nhc_A 41 DGSTITFEGTTSFG-YKEWK------GPLIRF-GGKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDST 112 (336)
T ss_dssp TTCEEEEESEEEEC-CCCSC------CCSEEC-CEESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEE
T ss_pred CCeEEEEeceEEcc-ccccc------CcEEEE-ecCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEE
Confidence 35666655544322 12232 135655 4599999997 775432 23 48999999999
Q ss_pred EeceEEECCCCCCCCCeeeecCcccEEEEeeEEecC---------CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCC
Q 041224 186 ISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATG---------DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGAN 255 (400)
Q Consensus 186 i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~---------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~ 255 (400)
|+++++.+++. -++++. |+||+|+|++|.+. .|+|.+.+ ++||+|+||++..++ +++|++.
T Consensus 113 i~~i~i~nsp~----~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~-s~nV~I~n~~i~~gDDciaiksg--- 183 (336)
T 1nhc_A 113 FKGINIKNTPV----QAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISE-STGVYISGATVKNQDDCIAINSG--- 183 (336)
T ss_dssp EESCEEECCSS----CCEEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECS-CEEEEEESCEEESSSEEEEESSE---
T ss_pred EEEEEEEeCCc----cEEEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecC-CCeEEEEeCEEEcCCCEEEEeCC---
Confidence 99999999642 369999 99999999999874 57899987 899999999998775 6999762
Q ss_pred CCCCCEEEEEEEeeEEeCCcceEEEEeecC-CCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCCCcceeEEeEEE
Q 041224 256 GGTSIVEDVHVRDCTFKGTKNGARIKTWQG-GSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVSDVSY 334 (400)
Q Consensus 256 ~~~~~i~ni~v~N~~~~~~~~gi~i~~~~~-~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nItf 334 (400)
+||+|+||++.+. +|+.|++... ..+.|+||+|+|+++.+..++++|+++.. ..+.++||+|
T Consensus 184 ------~nI~i~n~~~~~g-hGisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g----------~~G~v~nI~~ 246 (336)
T 1nhc_A 184 ------ESISFTGGTCSGG-HGLSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIYK----------ETGDVSEITY 246 (336)
T ss_dssp ------EEEEEESCEEESS-SEEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEE
T ss_pred ------eEEEEEeEEEECC-cCceEccCccccCCCEEEEEEEeeEEECCCcEEEEEEECC----------CCCEEeeeEE
Confidence 9999999999986 6999998632 34899999999999999999999998522 2357999999
Q ss_pred EeEEEecCCcceEEEEe---c------C--CCCeecEEEEeEEEEecCCCCCcceee
Q 041224 335 IGFQGTSSTEEAVQLSC---S------E--SVGCTDIKINNIDITHSDSGKDTRASC 380 (400)
Q Consensus 335 ~nI~~~~~~~~~i~i~~---~------~--~~~~~ni~~~nv~i~~~~~~~~~~~~c 380 (400)
+||++.....+++.++. . + ..+++||+|+||+.+......+..+.|
T Consensus 247 ~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~~~~i~~i~~~ni~gt~~~~~~~v~i~c 303 (336)
T 1nhc_A 247 SNIQLSGITDYGIVIEQDYENGSPTGTPSTGIPITDVTVDGVTGTLEDDATQVYILC 303 (336)
T ss_dssp EEEEEEEESSEEEEEEEEEETTEECSCCCSSSCEEEEEEEEEEEEECTTCEEEEEEC
T ss_pred eeEEeeccccccEEEEeecCCCCCCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEc
Confidence 99999987655776642 1 1 357999999999999876223455556
No 26
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.87 E-value=1.5e-19 Score=179.51 Aligned_cols=169 Identities=16% Similarity=0.215 Sum_probs=144.3
Q ss_pred eEEEEeecceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEec----CCceEEEcCCceeEEEEeeEEcCCc-eEEE
Q 041224 175 HISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIAT----GDDCVAIGTDTSNIAVTGVICGPGH-GISI 249 (400)
Q Consensus 175 ~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~----~dD~i~i~s~~~ni~i~n~~~~~~~-gi~i 249 (400)
.+++..|+|++|++++|.++. ..++++..|+||+|+|++|.+ ..|+|.+.+ +||+|+||++..++ +|+|
T Consensus 129 ~i~~~~~~nv~I~~iti~nsp----~~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~--~nV~I~n~~i~~gDD~Iai 202 (422)
T 1rmg_A 129 ILRLTDVTHFSVHDIILVDAP----AFHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG--SNIWVHDVEVTNKDECVTV 202 (422)
T ss_dssp EEEEEEEEEEEEEEEEEECCS----SCSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE--EEEEEEEEEEESSSEEEEE
T ss_pred EEEEcccceEEEECeEEECCC----ceEEEEeCcCCEEEEeEEEECCCCCCCccEeecC--CeEEEEeeEEeCCCCeEEe
Confidence 588999999999999999854 347999999999999999998 468999987 99999999999876 6999
Q ss_pred eccCCCCCCCCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCCCcceeE
Q 041224 250 GSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKV 329 (400)
Q Consensus 250 gs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i 329 (400)
++ +.+||+|+||++.+. +|++|++. +..+.|+||+|+|+++.+..++++|+++ . ..+.+
T Consensus 203 ~s--------~~~nI~I~n~~~~~~-~GisIGS~-g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~-~----------g~G~v 261 (422)
T 1rmg_A 203 KS--------PANNILVESIYCNWS-GGCAMGSL-GADTDVTDIVYRNVYTWSSNQMYMIKSN-G----------GSGTV 261 (422)
T ss_dssp EE--------EEEEEEEEEEEEESS-SEEEEEEE-CTTEEEEEEEEEEEEEESSSCSEEEEEB-B----------CCEEE
T ss_pred CC--------CCcCEEEEeEEEcCC-cceeeccc-CCCCcEEEEEEEeEEEeccceEEEEEec-C----------CCcEE
Confidence 86 579999999999876 69999986 4457899999999999999999999973 2 12479
Q ss_pred EeEEEEeEEEecCCcceEEEEec---------CCCCeecEEEEeEEEEecC
Q 041224 330 SDVSYIGFQGTSSTEEAVQLSCS---------ESVGCTDIKINNIDITHSD 371 (400)
Q Consensus 330 ~nItf~nI~~~~~~~~~i~i~~~---------~~~~~~ni~~~nv~i~~~~ 371 (400)
+||+|+||++.... .++.+... +..+++||+|+||+.+...
T Consensus 262 ~nI~~~NI~~~~v~-~~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~ 311 (422)
T 1rmg_A 262 SNVLLENFIGHGNA-YSLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEAN 311 (422)
T ss_dssp EEEEEEEEEEEEES-CSEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEESC
T ss_pred EEEEEEeEEEECcc-ccEEEEeeccCCCcccCCCceEEEEEEEeEEEEecc
Confidence 99999999998865 46777531 3457999999999999864
No 27
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.85 E-value=1e-19 Score=178.62 Aligned_cols=218 Identities=17% Similarity=0.236 Sum_probs=170.4
Q ss_pred CeEEEEeEEEEccCC--------CCccC---------C-CccccEEEeeeeceEEecCeeEeCCCccccccCCCCCCceE
Q 041224 92 SINVQIQGNIVAPHS--------SAWDG---------H-DKKKWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRPTAL 153 (400)
Q Consensus 92 ~v~l~~~g~i~~~~~--------~~~~~---------~-~~~~~i~~~~~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i 153 (400)
+++|...|+|.+... ..|.. . ....+|.+.+++|+.|+|.-+.+. +.| .+
T Consensus 110 ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~ns---p~~---------~i 177 (376)
T 1bhe_A 110 NSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINS---PNF---------HV 177 (376)
T ss_dssp SCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECC---SSC---------SE
T ss_pred eEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECC---CcE---------EE
Confidence 889988889876542 22321 0 123489999999999999444432 234 38
Q ss_pred EEeeeCcEEEEceEEeCCC----CceEEEEeecceEEeceEEECCCCCCCCCeeeec------CcccEEEEeeEEecCCc
Q 041224 154 SFGSCNNLVFRGLTHVDSP----GNHISVYGCNDVSISNLKIIAPESSPNTDGIDIT------HSSNVQIRDCTIATGDD 223 (400)
Q Consensus 154 ~~~~~~nv~i~~v~i~ns~----~~~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~------~s~nV~I~n~~i~~~dD 223 (400)
.+.+|++++|++++|.++. ..++++..|+||+|+|++|.+. .|+|.+. .|+||+|+||++..+.
T Consensus 178 ~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~g-----DDcIaiks~~~~~~s~nI~I~n~~~~~gh- 251 (376)
T 1bhe_A 178 VFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATG-----DDNVAIKAYKGRAETRNISILHNDFGTGH- 251 (376)
T ss_dssp EEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECS-----SCSEEEEECTTSCCEEEEEEEEEEECSSS-
T ss_pred EEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecC-----CCeEEEcccCCCCCceEEEEEeeEEEccc-
Confidence 8999999999999998752 3679999999999999999985 4788887 6999999999999865
Q ss_pred eEEEcC---CceeEEEEeeEEcCCc-eEEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEEEeecCC-----CeeEEeEE
Q 041224 224 CVAIGT---DTSNIAVTGVICGPGH-GISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTWQGG-----SGHARRIS 294 (400)
Q Consensus 224 ~i~i~s---~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~-----~g~i~nI~ 294 (400)
++++++ +.+||+|+||++.++. |++|++.. +..+.++||+|+|++|.+...++.|...... .+.|+||+
T Consensus 252 GisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~--g~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~~~~~~~~i~ni~ 329 (376)
T 1bhe_A 252 GMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDK--SAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDWSDIT 329 (376)
T ss_dssp CEEEEEEESSEEEEEEEEEEEESCSEEEEEECCT--TTCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCCCCCEEEEEE
T ss_pred cEEeccCCccEeeEEEEeeEEeCCCcEEEEEEec--CCCceEeeEEEEeEEEeCCCceEEEEeeccCCCCCcCcEEEEEE
Confidence 588875 5799999999998864 99999852 2468899999999999999999998764321 36799999
Q ss_pred EEeEEEecCCccEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecC
Q 041224 295 FERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSS 342 (400)
Q Consensus 295 f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~ 342 (400)
|+||+.++.. ++.+. +.+ ..+++||+|+||+++..
T Consensus 330 ~~ni~gt~~~-~~~l~---g~~---------~~~~~~I~l~nv~l~~~ 364 (376)
T 1bhe_A 330 FKDVTSETKG-VVVLN---GEN---------AKKPIEVTMKNVKLTSD 364 (376)
T ss_dssp EEEEEECSCC-EEEEE---CTT---------CSSCEEEEEEEEECCTT
T ss_pred EEEEEEEecc-eEEEE---eCC---------CCCeeeEEEEeEEEecC
Confidence 9999999754 44444 221 22478999999998764
No 28
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.85 E-value=3.3e-19 Score=172.90 Aligned_cols=226 Identities=18% Similarity=0.166 Sum_probs=171.0
Q ss_pred eceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEc---eEEeCCCC----------------ceEEE-E-eec
Q 041224 124 NGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRG---LTHVDSPG----------------NHISV-Y-GCN 182 (400)
Q Consensus 124 ~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~---v~i~ns~~----------------~~i~~-~-~~~ 182 (400)
++++|...|.+...- ..|. ...++.+ +.+|++|.+ -+|..... ..+.+ . .|+
T Consensus 41 ~~~~l~~~g~~~~~~-~~w~-----~g~~i~~-~~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~ 113 (349)
T 1hg8_A 41 NDSTVTFKGTTTFAT-TADN-----DFNPIVI-SGSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTG 113 (349)
T ss_dssp TTCEEEECSEEEECC-CCCT-----TCCSEEE-EEESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEES
T ss_pred CCeEEEEcCceeccc-cccc-----CCceEEE-ECccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcC
Confidence 456666666443211 2331 1235677 459999999 67754321 14777 6 788
Q ss_pred ceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEecC-----------------CceEEEcCCceeEEEEeeEEcCCc
Q 041224 183 DVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATG-----------------DDCVAIGTDTSNIAVTGVICGPGH 245 (400)
Q Consensus 183 nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~-----------------dD~i~i~s~~~ni~i~n~~~~~~~ 245 (400)
+++|+++++.+++ ..++++..|+||+|++++|.+. .|+|.+.+ ++||+|+||++..++
T Consensus 114 nv~I~giti~nsp----~~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~-s~nV~I~n~~i~~gD 188 (349)
T 1hg8_A 114 NSKITNLNIQNWP----VHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISS-SDHVTLDNNHVYNQD 188 (349)
T ss_dssp SEEEESCEEECCS----SEEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEES-CEEEEEEEEEEECSS
T ss_pred cEEEEEEEEEcCC----CceEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEcc-ccEEEEEeeEEecCC
Confidence 9999999999964 4579999999999999999862 56788877 899999999998765
Q ss_pred -eEEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEEEeec-CCCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCC
Q 041224 246 -GISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTWQ-GGSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQ 323 (400)
Q Consensus 246 -gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~-~~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~ 323 (400)
+++|++. +||+|+||++.+. +|+.|++.. ...+.|+||+|+|+++.+..++++|+++..
T Consensus 189 DcIaiksg---------~nI~i~n~~~~~g-hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g--------- 249 (349)
T 1hg8_A 189 DCVAVTSG---------TNIVVSNMYCSGG-HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSG--------- 249 (349)
T ss_dssp CSEEESSE---------EEEEEEEEEEESS-CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETT---------
T ss_pred CeEEeeCC---------eEEEEEeEEEeCC-cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCC---------
Confidence 7999762 9999999999875 699999862 234899999999999999999999997521
Q ss_pred CcceeEEeEEEEeEEEecCCcceEEEEec---------C--CCCeecEEEEeEEEEecCCCCCcceeee
Q 041224 324 TSAVKVSDVSYIGFQGTSSTEEAVQLSCS---------E--SVGCTDIKINNIDITHSDSGKDTRASCI 381 (400)
Q Consensus 324 ~~~~~i~nItf~nI~~~~~~~~~i~i~~~---------~--~~~~~ni~~~nv~i~~~~~~~~~~~~c~ 381 (400)
..+.++||+|+||++......++.++.. + ..+++||+|+||+.+.........+.|+
T Consensus 250 -~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~ 317 (349)
T 1hg8_A 250 -ATGTINNVTYQNIALTNISTYGVDVQQDYLNGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILCG 317 (349)
T ss_dssp -CCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred -CCccccceEEEEEEEEccccccEEEEeeccCCCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC
Confidence 2467999999999999875457766531 1 1369999999999988762334566664
No 29
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.85 E-value=7e-20 Score=176.48 Aligned_cols=223 Identities=13% Similarity=0.165 Sum_probs=169.3
Q ss_pred eceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEce--EEeCCC--Cc-------------eEEEEeecceEE
Q 041224 124 NGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGL--THVDSP--GN-------------HISVYGCNDVSI 186 (400)
Q Consensus 124 ~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v--~i~ns~--~~-------------~i~~~~~~nv~i 186 (400)
++++|...|++... ...|+. .++.+. ++|++|.+- +|.... .| .+.+..|+ ++|
T Consensus 39 ~~~~l~~~g~~~~~-~~~w~~------~~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i 109 (335)
T 1k5c_A 39 KGATVTMAGDITFA-KTTLDG------PLFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTY 109 (335)
T ss_dssp TTCEEEECSCEEEC-CCCSCS------CSEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEE
T ss_pred CCeEEEEeccEecc-cccccC------cEEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEE
Confidence 56666666655432 233431 357775 699999993 664321 12 37888999 999
Q ss_pred eceEEECCCCCCCCCeeeecCccc-EEEEeeEEecC----------CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCC
Q 041224 187 SNLKIIAPESSPNTDGIDITHSSN-VQIRDCTIATG----------DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGA 254 (400)
Q Consensus 187 ~~~~I~~~~~~~n~DGi~i~~s~n-V~I~n~~i~~~----------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~ 254 (400)
+++++.+++. .++++..|+| |+|+|++|.+. .|++.+ + ++||+|+||++..++ .++|++.
T Consensus 110 ~giti~nsp~----~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~-s~nV~I~n~~i~~gDDcIaiksg-- 181 (335)
T 1k5c_A 110 KKFEVLNSPA----QAISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-S-ANNVTIQNCIVKNQDDCIAINDG-- 181 (335)
T ss_dssp ESCEEESCSS----CCEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-E-CSSEEEESCEEESSSCSEEEEEE--
T ss_pred EEEEEECCCc----ceEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-c-CCeEEEEeeEEEcCCCEEEeeCC--
Confidence 9999999653 4599999999 99999999873 478999 4 899999999999875 6999872
Q ss_pred CCCCCCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCCCcceeEEeEEE
Q 041224 255 NGGTSIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVSDVSY 334 (400)
Q Consensus 255 ~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nItf 334 (400)
+||+|+||++.+. +|+.|++.. ..+.|+||+|+|+++.+..++++|+++... ..+.++||+|
T Consensus 182 -------~nI~i~n~~~~~g-hGisIGS~g-~~~~v~nV~v~n~~~~~t~~girIKt~~g~---------~~G~v~nI~f 243 (335)
T 1k5c_A 182 -------NNIRFENNQCSGG-HGISIGSIA-TGKHVSNVVIKGNTVTRSMYGVRIKAQRTA---------TSASVSGVTY 243 (335)
T ss_dssp -------EEEEEESCEEESS-CCEEEEEEC-TTCEEEEEEEESCEEEEEEEEEEEEEETTC---------CSCEEEEEEE
T ss_pred -------eeEEEEEEEEECC-ccCeEeecc-CCCCEEEEEEEeeEEECCCceEEEEEeCCC---------CcceEeeeEE
Confidence 9999999999986 799999863 268999999999999999999999976321 1157999999
Q ss_pred EeEEEecCCcceEEEEe-------cC--CCCeecEEEEeEEEE--ecCCCCCcceeee
Q 041224 335 IGFQGTSSTEEAVQLSC-------SE--SVGCTDIKINNIDIT--HSDSGKDTRASCI 381 (400)
Q Consensus 335 ~nI~~~~~~~~~i~i~~-------~~--~~~~~ni~~~nv~i~--~~~~~~~~~~~c~ 381 (400)
+||++......++.++. .+ ..+++||+|+||+++ ..+......+.|+
T Consensus 244 ~ni~~~~v~~~~i~i~~~Y~~~~~~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~ 301 (335)
T 1k5c_A 244 DANTISGIAKYGVLISQSYPDDVGNPGTGAPFSDVNFTGGATTIKVNNAATRVTVECG 301 (335)
T ss_dssp ESCEEEEEEEEEEEEEEEETSSSSSCCSSSCEEEEEECSSCEEEEECTTCEEEEEECS
T ss_pred EEEEEEccccccEEEEeeCCCCCCCCCCCceEEEEEEEEEEEeeEEcCCceEEEEECC
Confidence 99999987545777763 12 357999999999944 4431234556653
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.80 E-value=5.5e-18 Score=172.78 Aligned_cols=236 Identities=10% Similarity=0.083 Sum_probs=170.8
Q ss_pred Cce-EEecCCCEEEeeeeeecCCCCCCCeEEEEeEEEEccCCCCc-------cCCCcc-ccEEEe------eeeceEEec
Q 041224 66 AAP-LLVPAGKTFLLNPVSFQGPCKSSSINVQIQGNIVAPHSSAW-------DGHDKK-KWLLFS------NVNGLTVNG 130 (400)
Q Consensus 66 g~~-v~iP~G~~Y~~~~l~l~~~~ks~~v~l~~~g~i~~~~~~~~-------~~~~~~-~~i~~~------~~~nv~I~G 130 (400)
+-+ |++++| .++.+++.+.+. . +++|...|+|.+.....| +....+ ..+.+. +|+||.|+|
T Consensus 264 nvt~L~L~~G-A~l~g~i~~~~~--~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~G 339 (574)
T 1ogo_X 264 NTYWVYLAPG-AYVKGAIEYFTK--Q-NFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVG 339 (574)
T ss_dssp TCCEEEECTT-EEEESCEEECCS--S-CEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEES
T ss_pred CCceEEecCC-cEEEccEEEeCc--e-eEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEEC
Confidence 456 999999 999999888652 4 889988899976542222 111112 234444 899999999
Q ss_pred CeeEeCCCccccccCCCCCCceEEEeeeCcE--EEEceEEeCCCC---ceEEEEeecceEEeceEEECCCCCCCCCeeee
Q 041224 131 NGKIDGKGASWWSNKQNQRPTALSFGSCNNL--VFRGLTHVDSPG---NHISVYGCNDVSISNLKIIAPESSPNTDGIDI 205 (400)
Q Consensus 131 ~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv--~i~~v~i~ns~~---~~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i 205 (400)
..+++. ++|. +++.+|+|+ +|+++++.+++. .++++. +||+|+||+|.+. .|+|.+
T Consensus 340 iti~NS---p~w~---------i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~g-----DDcIaI 400 (574)
T 1ogo_X 340 PTINAP---PFNT---------MDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVN-----DDAIKI 400 (574)
T ss_dssp CEEECC---SSCS---------EEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEES-----SCSEEC
T ss_pred eEEECC---CCcE---------EeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECC-----CCEEEE
Confidence 877764 4453 889999999 999999987644 468888 9999999999995 478988
Q ss_pred cCcccEEEEeeEEecCCc-e-EEEcC---CceeEEEEeeEEcCCc---------eEEEeccCCCC------CCCCEEEEE
Q 041224 206 THSSNVQIRDCTIATGDD-C-VAIGT---DTSNIAVTGVICGPGH---------GISIGSLGANG------GTSIVEDVH 265 (400)
Q Consensus 206 ~~s~nV~I~n~~i~~~dD-~-i~i~s---~~~ni~i~n~~~~~~~---------gi~igs~g~~~------~~~~i~ni~ 265 (400)
.+ +||+|+||+++.+.. + |.+++ ..+||+|+||++.+.. +..+|++..+. ....+ ||+
T Consensus 401 ks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~gV-NI~ 478 (574)
T 1ogo_X 401 YY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKSI-SMT 478 (574)
T ss_dssp CS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEEE-EEE
T ss_pred CC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCCceE-EEE
Confidence 76 999999999998753 4 88875 4899999999996542 34455543211 01228 999
Q ss_pred EEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEec------CCc-cEEEEeeecCCCCCCCCCCcceeEEeEEEEeEE
Q 041224 266 VRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLES------SDN-PIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQ 338 (400)
Q Consensus 266 v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~------~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~ 338 (400)
|+|++|.+...++ |...+ .+.|+||+|+||++++ ... +..+. .+ . ..++||+|+||+
T Consensus 479 f~NI~~~~v~~~i-i~i~p--~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~-G~-----------~-~~v~nI~~~NV~ 542 (574)
T 1ogo_X 479 VSNVVCEGLCPSL-FRITP--LQNYKNFVVKNVAFPDGLQTNSIGTGESIIP-AA-----------S-GLTMGLAISAWT 542 (574)
T ss_dssp EEEEEECSSBCEE-EEECC--SEEEEEEEEEEEEETTCBCCSTTCTTCEEEC-CC-----------T-TCCEEEEEEEEE
T ss_pred EEeEEEEceeEee-EEECC--CCCEEEEEEEeEEEeCccccccccccceeEe-cC-----------C-CccceEEEEeEE
Confidence 9999999988775 44432 4689999999999986 221 11111 11 1 358999999999
Q ss_pred EecC
Q 041224 339 GTSS 342 (400)
Q Consensus 339 ~~~~ 342 (400)
+.+.
T Consensus 543 i~g~ 546 (574)
T 1ogo_X 543 IGGQ 546 (574)
T ss_dssp ETTE
T ss_pred EeCE
Confidence 8654
No 31
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.79 E-value=7.7e-18 Score=171.76 Aligned_cols=249 Identities=15% Similarity=0.194 Sum_probs=171.2
Q ss_pred Cce-EEecCCCEEEeeeeeecCCCCCCCeEEEEeEEEEccCCCC-------ccC--CCccccEEE------eeeeceEEe
Q 041224 66 AAP-LLVPAGKTFLLNPVSFQGPCKSSSINVQIQGNIVAPHSSA-------WDG--HDKKKWLLF------SNVNGLTVN 129 (400)
Q Consensus 66 g~~-v~iP~G~~Y~~~~l~l~~~~ks~~v~l~~~g~i~~~~~~~-------~~~--~~~~~~i~~------~~~~nv~I~ 129 (400)
+.+ ||+++| .++.+++.+... -. +++|...|+|.+....- |.. ......+.+ .+++|+.|+
T Consensus 222 ~~~~L~l~~G-A~L~gs~~~~~~-~~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I~ 298 (549)
T 1x0c_A 222 SVTWVYFAPG-AYVKGAVEFLST-AS-EVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLN 298 (549)
T ss_dssp TCCEEEECTT-EEEESCEEECCC-SS-EEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEEE
T ss_pred CCCeEecCCC-CEEEEEEEEecC-ce-eEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEEE
Confidence 566 999999 999988877522 23 88888889998765321 211 001112344 889999999
Q ss_pred cCeeEeCCCccccccCCCCCCceEEEe-ee-Cc--EEEEceEEeCCCC---ceEEEEeecceEEeceEEECCCCCCCCCe
Q 041224 130 GNGKIDGKGASWWSNKQNQRPTALSFG-SC-NN--LVFRGLTHVDSPG---NHISVYGCNDVSISNLKIIAPESSPNTDG 202 (400)
Q Consensus 130 G~G~idg~g~~~~~~~~~~rp~~i~~~-~~-~n--v~i~~v~i~ns~~---~~i~~~~~~nv~i~~~~I~~~~~~~n~DG 202 (400)
|..+.+. ++|. +++. .| ++ ++|+++++.+++. .++++. +||+|+||+|.+. .|+
T Consensus 299 Giti~Ns---p~w~---------i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~g-----DDc 359 (549)
T 1x0c_A 299 GVTVSAP---PFNS---------MDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTD-----DDG 359 (549)
T ss_dssp SCEEECC---SSCS---------EEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEES-----SCC
T ss_pred CcEEECC---Ccee---------EEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCC-----CCE
Confidence 9776654 4553 6644 45 69 9999999987543 468887 9999999999995 468
Q ss_pred eeecCcccEEEEeeEEecCCc-e-EEEcC---CceeEEEEeeEEcCCc-------eEEEeccCCC--C------C-CCCE
Q 041224 203 IDITHSSNVQIRDCTIATGDD-C-VAIGT---DTSNIAVTGVICGPGH-------GISIGSLGAN--G------G-TSIV 261 (400)
Q Consensus 203 i~i~~s~nV~I~n~~i~~~dD-~-i~i~s---~~~ni~i~n~~~~~~~-------gi~igs~g~~--~------~-~~~i 261 (400)
|.+.+ +||+|+||++..+.. + |++++ ..+||+|+||++.++. |..|++...+ + + .+.+
T Consensus 360 IaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G~i 438 (549)
T 1x0c_A 360 LKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGN 438 (549)
T ss_dssp EECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCCCBE
T ss_pred EEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCCceE
Confidence 98877 999999999987643 5 88874 4799999999997543 3225541111 1 2 5689
Q ss_pred EEEEEEeeEEeCCc-ceEEEEee-cCCCeeEEeEEEEeEEEecCC-----ccEEEEeeecCCCCCCCCCCcceeEEeEEE
Q 041224 262 EDVHVRDCTFKGTK-NGARIKTW-QGGSGHARRISFERIRLESSD-----NPIIIDQYYCGPNGDCKNQTSAVKVSDVSY 334 (400)
Q Consensus 262 ~ni~v~N~~~~~~~-~gi~i~~~-~~~~g~i~nI~f~ni~~~~~~-----~~i~i~~~~~~~~~~~~~~~~~~~i~nItf 334 (400)
+||+|+|++|.+.. .|+.+... ....+.|+||+|+||++++.+ ....+...|..-. |. ....++||+|
T Consensus 439 ~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~~--~~---~~~~v~nI~f 513 (549)
T 1x0c_A 439 SNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLN--NG---KQITVTDFSI 513 (549)
T ss_dssp EEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBTT--TC---CBCCEEEEEE
T ss_pred ccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeCCCccc--cc---cceeeeeEEE
Confidence 99999999988865 44433211 122357999999999998765 2222222222200 11 2246999999
Q ss_pred EeEEEecC
Q 041224 335 IGFQGTSS 342 (400)
Q Consensus 335 ~nI~~~~~ 342 (400)
+||++.+.
T Consensus 514 ~NV~i~G~ 521 (549)
T 1x0c_A 514 EGFTVGNT 521 (549)
T ss_dssp EEEEETTE
T ss_pred EeEEEeCe
Confidence 99998764
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.58 E-value=8.9e-14 Score=133.97 Aligned_cols=224 Identities=16% Similarity=0.236 Sum_probs=157.0
Q ss_pred CeeEEeeec----CccCCCCcchHHHHHHHHHHHhcC-----CCCCceEEecCCCEEEe-eeeeecCCCCCCCeEEEEeE
Q 041224 30 ASSVSVIQF----GAVGDGETDDSQAFLKAWKSICGS-----KSNAAPLLVPAGKTFLL-NPVSFQGPCKSSSINVQIQG 99 (400)
Q Consensus 30 ~~~~nv~d~----Ga~gdg~tddt~aiq~Ai~~a~~~-----~~gg~~v~iP~G~~Y~~-~~l~l~~~~ks~~v~l~~~g 99 (400)
...|+|++| +|+|++.+|++++|+++|.+..++ .+.|++|++|+| +|.+ +++.+. |+ .++|..++
T Consensus 12 ~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G-~Y~l~g~ivId---kp-~LtL~G~~ 86 (410)
T 2inu_A 12 PNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPG-DYDLHTQVVVD---VS-YLTIAGFG 86 (410)
T ss_dssp CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSE-EEEECSCEEEC---CT-TEEEECSC
T ss_pred CceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCC-eeccCCcEEEe---cC-cEEEEecC
Confidence 478999999 899999999999999999554430 125899999999 9997 899996 44 59998764
Q ss_pred --E----EEccCC-CCc----cC---------CCccccEEEee-----eeceEEecCeeEeCC-----CccccccCCCCC
Q 041224 100 --N----IVAPHS-SAW----DG---------HDKKKWLLFSN-----VNGLTVNGNGKIDGK-----GASWWSNKQNQR 149 (400)
Q Consensus 100 --~----i~~~~~-~~~----~~---------~~~~~~i~~~~-----~~nv~I~G~G~idg~-----g~~~~~~~~~~r 149 (400)
. |..... +.| ++ ...++.+.+.. .++|++.| -+|+|- |.... ..
T Consensus 87 ~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~-v~I~G~~~~~~G~s~~-----~~ 160 (410)
T 2inu_A 87 HGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD-FCLDGVGFTPGKNSYH-----NG 160 (410)
T ss_dssp CCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEES-CEEECCCCSSSTTSCC-----CS
T ss_pred CCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECC-EEEECCEeecCCCCcc-----cC
Confidence 3 321111 232 21 00122233322 24555555 334433 32221 22
Q ss_pred CceEEEee-eCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCCCCCCCCeeeecC-cccEEEEeeEEecCCce--E
Q 041224 150 PTALSFGS-CNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSPNTDGIDITH-SSNVQIRDCTIATGDDC--V 225 (400)
Q Consensus 150 p~~i~~~~-~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~-s~nV~I~n~~i~~~dD~--i 225 (400)
...|.+.. +++++|++..|.+. .+++.+..+++.+|++..|.. ...||++++ ++...|+++.+...+|+ |
T Consensus 161 dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N~i~~~~dG~gI 234 (410)
T 2inu_A 161 KTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGNHMGAGPDGVTL 234 (410)
T ss_dssp CEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESCEEECCTTSEEE
T ss_pred ceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecceeeecCCCCEE
Confidence 34677765 88899999999886 589999999999999999985 356899988 88899999999998888 6
Q ss_pred EEcCCceeEEEEeeEE-cCC-ceEEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEE
Q 041224 226 AIGTDTSNIAVTGVIC-GPG-HGISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARI 280 (400)
Q Consensus 226 ~i~s~~~ni~i~n~~~-~~~-~gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i 280 (400)
.+.. +.+.+|+++.+ ..+ .|+-+- ...+..|+++.+.+...|+.+
T Consensus 235 yl~n-s~~~~I~~N~i~~~~R~gIh~m---------~s~~~~i~~N~f~~~~~Gi~~ 281 (410)
T 2inu_A 235 LAEN-HEGLLVTGNNLFPRGRSLIEFT---------GCNRCSVTSNRLQGFYPGMLR 281 (410)
T ss_dssp EEES-EESCEEESCEECSCSSEEEEEE---------SCBSCEEESCEEEESSSCSEE
T ss_pred EEEe-CCCCEEECCCcccCcceEEEEE---------ccCCCEEECCEEecceeEEEE
Confidence 6666 78888888866 434 477662 335577888888877777654
No 33
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.53 E-value=9e-12 Score=126.34 Aligned_cols=219 Identities=14% Similarity=0.159 Sum_probs=144.6
Q ss_pred ccEEEeeeeceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCC-ceEEEEe------ecceEEec
Q 041224 116 KWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPG-NHISVYG------CNDVSISN 188 (400)
Q Consensus 116 ~~i~~~~~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~-~~i~~~~------~~nv~i~~ 188 (400)
.+|.+.+++|+.|++--+.+... ++++|.++.. .+++++. |+||+|+|
T Consensus 135 ~lI~f~~c~NV~I~gVti~NSp~-------------------------~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~N 189 (609)
T 3gq8_A 135 SNLSIRACHNVYIRDIEAVDCTL-------------------------HGIDITCGGLDYPYLGDGTTAPNPSENIWIEN 189 (609)
T ss_dssp CSEEEESCEEEEEEEEEEESCSS-------------------------CSEEEECSSSSCCCCCTTCCCSSCCEEEEEES
T ss_pred cEEEEEeeceEEEEeeEEEeCCC-------------------------CCeEEeCCCCCccccCCCccccccceeEEEEe
Confidence 47999999999999933333211 2233332211 3445555 99999999
Q ss_pred eEEECCCCCCCCCeeeecCcccEEEEeeEEecC-----CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCCCCCCCEE
Q 041224 189 LKIIAPESSPNTDGIDITHSSNVQIRDCTIATG-----DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGANGGTSIVE 262 (400)
Q Consensus 189 ~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~-----dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~i~ 262 (400)
|+|.+. ..|||.+.+|+||+|+||+++.. ..++.++++++||+|+||++.++. |+.|++.+ +.+.++
T Consensus 190 c~I~~t----GDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~---~~~~v~ 262 (609)
T 3gq8_A 190 CEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG---DAPAAY 262 (609)
T ss_dssp CEEESC----SSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECT---TSCCCE
T ss_pred eEEEec----CCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecC---CCCccc
Confidence 999763 35899999999999999999654 468999988899999999998765 89999764 357899
Q ss_pred EEEEEeeEEeCCcceEEEEeecC------CCeeEEeEEEEeEEEecCC-----------ccEEEEee----------ecC
Q 041224 263 DVHVRDCTFKGTKNGARIKTWQG------GSGHARRISFERIRLESSD-----------NPIIIDQY----------YCG 315 (400)
Q Consensus 263 ni~v~N~~~~~~~~gi~i~~~~~------~~g~i~nI~f~ni~~~~~~-----------~~i~i~~~----------~~~ 315 (400)
||+|.|+...+......+..... .....+||.++|++..... +++++..+ +.+
T Consensus 263 NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~~~~d 342 (609)
T 3gq8_A 263 NISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTD 342 (609)
T ss_dssp EEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEEEEEEEEECS
T ss_pred cEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeecccCceeeCCCcceEEEEcCCCeEEcCceEccC
Confidence 99999987766544333322211 2246899999999986542 24554422 222
Q ss_pred CCCCCCCCCcceeE----EeEEEEeEEEecCCc--ceEEEEecCCCCeecEEEEeEEEEe
Q 041224 316 PNGDCKNQTSAVKV----SDVSYIGFQGTSSTE--EAVQLSCSESVGCTDIKINNIDITH 369 (400)
Q Consensus 316 ~~~~~~~~~~~~~i----~nItf~nI~~~~~~~--~~i~i~~~~~~~~~ni~~~nv~i~~ 369 (400)
+.. ..+.+...+ +||++++|.+++-.. ..+++.|.+ ..++.|.+.|+++..
T Consensus 343 ~~y--~~~~~~~~~q~~~~~~~l~~~~i~gf~~a~~~i~~~gg~-~~~~~v~i~n~~i~~ 399 (609)
T 3gq8_A 343 DPN--LLTETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNN 399 (609)
T ss_dssp CTT--SCCSEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCCC-CTTCCEEEEEEEEES
T ss_pred Ccc--ccCCceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CcCCeEEEeccEEee
Confidence 221 111223333 799999999887542 356665543 345555555555543
No 34
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.53 E-value=2.3e-13 Score=135.66 Aligned_cols=158 Identities=18% Similarity=0.140 Sum_probs=120.8
Q ss_pred eeeCcEEEEce----EEeCCC----C-ceEEEEeecceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEecCCceEE
Q 041224 156 GSCNNLVFRGL----THVDSP----G-NHISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATGDDCVA 226 (400)
Q Consensus 156 ~~~~nv~i~~v----~i~ns~----~-~~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~ 226 (400)
.+++|++|+|- ++...+ . ..+.+..|+|++|+|+++.+.. .+..|.+|.+. ..|++.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w--------~ih~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK--------TIFASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS--------CBSCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc--------eEeeceeeeee------cCCCce
Confidence 57888888876 453221 1 2478899999999999999831 13344444443 256777
Q ss_pred EcCCceeEEEEeeEEcCCc-eEEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEEEee-----cCCCeeEEeEEEEeEEE
Q 041224 227 IGTDTSNIAVTGVICGPGH-GISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTW-----QGGSGHARRISFERIRL 300 (400)
Q Consensus 227 i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~-----~~~~g~i~nI~f~ni~~ 300 (400)
+ .++||+|+||++..++ ++. +. ....++||+|+||+|.+ .+|++|+++ .+..|.++||+|+|++|
T Consensus 172 i--~s~nV~I~n~~I~~gddgiG--s~----~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~ 242 (464)
T 1h80_A 172 H--WSRNGIIERIKQNNALFGYG--LI----QTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRC 242 (464)
T ss_dssp E--EEEEEEEEEEEEESCCTTCE--EE----EESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEE
T ss_pred e--eccCEEEeceEEecCCCeEE--ec----ccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEE
Confidence 7 4799999999999876 553 21 35689999999999999 799999998 55678999999999999
Q ss_pred ecCCccEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCCcceEEEE
Q 041224 301 ESSDNPIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSSTEEAVQLS 350 (400)
Q Consensus 301 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~i~i~ 350 (400)
+++.+||.|++. ...++||+|+||++++.. .++.+.
T Consensus 243 ~nv~~~I~I~p~-------------~~~isnItfeNI~~t~~~-~aI~i~ 278 (464)
T 1h80_A 243 SKGLAAVMFGPH-------------FMKNGDVQVTNVSSVSCG-SAVRSD 278 (464)
T ss_dssp ESSSEEEEEECT-------------TCBCCCEEEEEEEEESSS-CSEEEC
T ss_pred ECCceeEEEeCC-------------CceEeEEEEEEEEEEccc-eeEEEe
Confidence 999999999831 135899999999999864 567665
No 35
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.52 E-value=1e-11 Score=127.95 Aligned_cols=219 Identities=14% Similarity=0.159 Sum_probs=141.4
Q ss_pred ccEEEeeeeceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCC-ceEEEEe------ecceEEec
Q 041224 116 KWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPG-NHISVYG------CNDVSISN 188 (400)
Q Consensus 116 ~~i~~~~~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~-~~i~~~~------~~nv~i~~ 188 (400)
.+|.+.+++|+.|++--+.+... ++++|.++.. .+++++. |+||+|+|
T Consensus 135 ~lI~f~~ckNV~I~gVti~NSp~-------------------------~gI~I~np~~NDGid~DGi~fdi~S~NV~I~N 189 (772)
T 3gqn_A 135 SNLSIRACHNVYIRDIEAVDCTL-------------------------HGIDITCGGLDYPYLGDGTTAPNPSENIWIEN 189 (772)
T ss_dssp CSEEEESCEEEEEEEEEEESCSS-------------------------CSEEEECSSSSCCCCCTTCCCSSCCEEEEEES
T ss_pred cEEEEEeeceEEEEeEEEEeCCC-------------------------CCEEEeCCCcCCcCCCcCcccccccceEEEEe
Confidence 47899999999999933333211 2333333221 3445555 99999999
Q ss_pred eEEECCCCCCCCCeeeecCcccEEEEeeEEecC-----CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCCCCCCCEE
Q 041224 189 LKIIAPESSPNTDGIDITHSSNVQIRDCTIATG-----DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGANGGTSIVE 262 (400)
Q Consensus 189 ~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~-----dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~i~ 262 (400)
|+|.+. ..|||.+.+|+||+|+||++... ..+|.++++++||+|+||++.++. |+.|++.+ +.+.++
T Consensus 190 c~I~nt----GDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~---~gg~v~ 262 (772)
T 3gqn_A 190 CEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG---DAPAAY 262 (772)
T ss_dssp CEEESC----SSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCCT---TSCCCE
T ss_pred eEEEec----CcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEeC---CCCccc
Confidence 999763 35899999999999999999554 578999988899999999998765 89999764 457899
Q ss_pred EEEEEeeEEeCCcceEEEEeecC------CCeeEEeEEEEeEEEecCC-----------ccEEEEee----------ecC
Q 041224 263 DVHVRDCTFKGTKNGARIKTWQG------GSGHARRISFERIRLESSD-----------NPIIIDQY----------YCG 315 (400)
Q Consensus 263 ni~v~N~~~~~~~~gi~i~~~~~------~~g~i~nI~f~ni~~~~~~-----------~~i~i~~~----------~~~ 315 (400)
||++.|+.......-..+..... .+-..+||.+.|++..... +++.+..+ +..
T Consensus 263 NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~i~~~~~igd 342 (772)
T 3gqn_A 263 NISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTD 342 (772)
T ss_dssp EEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEEEEEEEEECS
T ss_pred cEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcccccCceeeCCCcceEEEEcCCCcEecCceeccC
Confidence 99999766554433222211111 1136789999999876542 24444322 122
Q ss_pred CCCCCCCCCcceeE----EeEEEEeEEEecCCc--ceEEEEecCCCCeecEEEEeEEEEe
Q 041224 316 PNGDCKNQTSAVKV----SDVSYIGFQGTSSTE--EAVQLSCSESVGCTDIKINNIDITH 369 (400)
Q Consensus 316 ~~~~~~~~~~~~~i----~nItf~nI~~~~~~~--~~i~i~~~~~~~~~ni~~~nv~i~~ 369 (400)
+.. ..+.+...+ +||++++|.+++-.. ..+++.|.+ ..+..|.+.|+++..
T Consensus 343 ~~y--~~~~~~i~~q~~~~~~~ln~i~i~gf~~a~~~i~v~gg~-~~~~~v~i~n~~i~~ 399 (772)
T 3gqn_A 343 DPN--LLTETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNN 399 (772)
T ss_dssp CTT--SCCSEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCST-TCCEEEEEEEEEEES
T ss_pred ccc--ccCCceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CCCCeEEEeccEEee
Confidence 211 111222333 799999999887542 356665543 345556666666553
No 36
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.47 E-value=2.2e-12 Score=130.14 Aligned_cols=227 Identities=13% Similarity=0.025 Sum_probs=153.5
Q ss_pred CeEEEEeEEEEccCCCCccCCC---ccccEEEeeeeceEEecCeeEeCCCccccccCCCCCCceEEE---eeeCcEEEEc
Q 041224 92 SINVQIQGNIVAPHSSAWDGHD---KKKWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRPTALSF---GSCNNLVFRG 165 (400)
Q Consensus 92 ~v~l~~~g~i~~~~~~~~~~~~---~~~~i~~~~~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~---~~~~nv~i~~ 165 (400)
+++|...|+|.+.....|+... .+|.+.+.+++ |+|.-+.+. .+.| .+++ ..|+|++|++
T Consensus 151 NItItG~GtIDGqG~~wW~~~~~~~~RP~l~f~~c~---I~GITi~NS--DP~w---------~I~iG~~~~c~NVtI~n 216 (600)
T 2x6w_A 151 NCHIYGHGVVDFGGYEFGASSQLRNGVAFGRSYNCS---VTGITFQNG--DVTW---------AITLGWNGYGSNCYVRK 216 (600)
T ss_dssp EEEEESSCEEECTTCCCSSTTCCEEEEECCSEEEEE---EESCEEESC--CCSC---------SEEECBTTBEEEEEEES
T ss_pred eEEEecceeeeCCccccccccccCCCCCEEEEeeeE---EeCeEEECC--CCcc---------EEEeCCCCCcccEEEeC
Confidence 7777777888765444443211 23555566655 777444432 1344 3888 8999999999
Q ss_pred eE----EeCCC-CceEEEEeecceEEeceEEECCCCCCCCCeeee-cCcc--cEEEEeeEEecCCceEEEcC----Ccee
Q 041224 166 LT----HVDSP-GNHISVYGCNDVSISNLKIIAPESSPNTDGIDI-THSS--NVQIRDCTIATGDDCVAIGT----DTSN 233 (400)
Q Consensus 166 v~----i~ns~-~~~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i-~~s~--nV~I~n~~i~~~dD~i~i~s----~~~n 233 (400)
++ |.+++ ..++ |+|+|+.|.+. .|+|.+ .+.+ ++.++ .+..++.+|+++| +.+|
T Consensus 217 vtfi~aI~sspNTDGI-------V~I~nc~I~tG-----DDCIAI~KSGs~~ni~~e--~~~~GHgGISIGSe~~ggV~N 282 (600)
T 2x6w_A 217 CRFINLVNSSVNADHS-------TVYVNCPYSGV-----ESCYFSMSSSFARNIACS--VQLHQHDTFYRGSTVNGYCRG 282 (600)
T ss_dssp CEEECCCCCSSCCCEE-------EEEECSSSEEE-----ESCEEECCCTTHHHHEEE--EEECSSSEEEESCEEEEESEE
T ss_pred eEEcceEecCCCCCEE-------EEEEeeEEecC-----CcEEEEecCCCcCCeEEE--EEcCCCCcEEecccccCcEEE
Confidence 99 76644 2455 89999999884 478988 6543 45666 5667778999987 3688
Q ss_pred EEEEeeEEcCCceEEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEEEeecC--CCeeEEeEEEEeEEEecCCc------
Q 041224 234 IAVTGVICGPGHGISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTWQG--GSGHARRISFERIRLESSDN------ 305 (400)
Q Consensus 234 i~i~n~~~~~~~gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~~--~~g~i~nI~f~ni~~~~~~~------ 305 (400)
|+|+| ++ ++.. +..+.++||+|+|++|.+...++.+...+. ..+.|+||+|+||+.+....
T Consensus 283 V~V~N-rI--------Kt~~--G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNItgTsas~aav~~~ 351 (600)
T 2x6w_A 283 AYVVM-HA--------AEAA--GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNIVSIGERAAFSAP 351 (600)
T ss_dssp EEEEE-CG--------GGCT--TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCEEEECSCCTTSSS
T ss_pred EEEEE-EE--------Eeec--CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEEEEeccccccccc
Confidence 88888 33 3221 245889999999999999988888876432 34799999999999987542
Q ss_pred -cEEEEeeecCCCCCCCCCCcceeEEeEEEEeEEEecCCc----ceEEEEecCCCCeecEEEEeEE
Q 041224 306 -PIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGFQGTSSTE----EAVQLSCSESVGCTDIKINNID 366 (400)
Q Consensus 306 -~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~----~~i~i~~~~~~~~~ni~~~nv~ 366 (400)
+.+|...... |. ......|++|+|+|+++..... +++.+ .+.+++|+|.+-.
T Consensus 352 ~g~~i~g~p~~----~~-~~~~~~Ie~V~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~~~ 408 (600)
T 2x6w_A 352 FGAFIDIGPDN----SG-ASNVQDIQRVLVTGNSFYAPANITDSAAITL----RANLNGCTFIANN 408 (600)
T ss_dssp CEEEEEECCCT----TC-CSSSCCEEEEEEESCEEECCTTCSSEEEEEE----CSCBSCEEEESCE
T ss_pred cceEEEecCcc----cc-cccccceeEEEEeceEEEcCCccCCCcceee----eccccceEEecCc
Confidence 2444432111 11 1234579999999999876422 23333 3568888887655
No 37
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.41 E-value=1.6e-11 Score=120.35 Aligned_cols=167 Identities=13% Similarity=0.115 Sum_probs=109.2
Q ss_pred eeeceEEecCeeEeCCCccccccCCCCCCceEEEeeeC-cEEEEceEEeCCCCceEEEEeecceEEeceEEECCCCCCCC
Q 041224 122 NVNGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCN-NLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSPNT 200 (400)
Q Consensus 122 ~~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~-nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~~~n~ 200 (400)
++++++|+|--+.+..+ ..+++..|. ++++++..+.+...+++.+..|++..|+++++..+ +.
T Consensus 132 ~~~nv~I~~~~i~n~~~------------~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~----~~ 195 (377)
T 2pyg_A 132 ADRDVTIERVEVREMSG------------YGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYAN----DR 195 (377)
T ss_dssp CEEEEEEEEEEEECCSS------------CSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESC----SS
T ss_pred cccceEEEeEEEEeccc------------ceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEcc----cc
Confidence 57888888843433221 246766654 68888888888888888888898888888877663 47
Q ss_pred CeeeecC-cccEEEEeeEEecCCceEEEc-------CCceeEEEEeeEEcC--CceEEEeccCC----------C-CC--
Q 041224 201 DGIDITH-SSNVQIRDCTIATGDDCVAIG-------TDTSNIAVTGVICGP--GHGISIGSLGA----------N-GG-- 257 (400)
Q Consensus 201 DGi~i~~-s~nV~I~n~~i~~~dD~i~i~-------s~~~ni~i~n~~~~~--~~gi~igs~g~----------~-~~-- 257 (400)
|||++.. |++++|+|+++...++++.+. ..+.|++|+++.+++ .+|+.+..... . ..
T Consensus 196 ~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~~~~GI 275 (377)
T 2pyg_A 196 HGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHGNGSSGV 275 (377)
T ss_dssp CSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEESCSSCSE
T ss_pred CcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCceEeccccCeEEECCEEECCCCceE
Confidence 8999776 889999999998887777662 235666666665543 23433322100 0 00
Q ss_pred -CCCEEEEEEEeeEEeCCcc-----eEEEEeecCCCe---e---EEeEEEEeEEEecCC
Q 041224 258 -TSIVEDVHVRDCTFKGTKN-----GARIKTWQGGSG---H---ARRISFERIRLESSD 304 (400)
Q Consensus 258 -~~~i~ni~v~N~~~~~~~~-----gi~i~~~~~~~g---~---i~nI~f~ni~~~~~~ 304 (400)
-..+++++|+|++|.+... .+.+..+.+..+ . -++++++++++.+..
T Consensus 276 ~i~g~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~N~i~g~~ 334 (377)
T 2pyg_A 276 RVYGAQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAGASGTYYTTLNTRIEGNTISGSA 334 (377)
T ss_dssp EEEEEEEEEEESCEEESCCSSSSCCSEEEECEEETTSSSCEEECCBCCEEESCEEECCS
T ss_pred EEecCCCcEEECcEEECCcccccccceEEEEecCCCccceeeeeccCeEEECCEEECcC
Confidence 0136899999999997643 233333322222 1 378999999999853
No 38
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.25 E-value=8.7e-10 Score=108.30 Aligned_cols=246 Identities=13% Similarity=0.126 Sum_probs=155.9
Q ss_pred CCCCeeEEeeecCcc-CCCCcchHH-HHHHHHHHHhcCCCCCceEEecCCCEEE--e-----eeeeecCCCCC----CCe
Q 041224 27 PSYASSVSVIQFGAV-GDGETDDSQ-AFLKAWKSICGSKSNAAPLLVPAGKTFL--L-----NPVSFQGPCKS----SSI 93 (400)
Q Consensus 27 ~~~~~~~nv~d~Ga~-gdg~tddt~-aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~--~-----~~l~l~~~~ks----~~v 93 (400)
++.++++.|..-|-. ++|.+.++| .||+|++ +++ .|.+|+|.+| +|. + ..|.+. ++ ..+
T Consensus 11 ~~~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~-~a~---pGdtI~l~~G-tY~~~~~e~~~~~i~~~---~sGt~~~pI 82 (400)
T 1ru4_A 11 ISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMA-AVN---PGELILLKPG-TYTIPYTQGKGNTITFN---KSGKDGAPI 82 (400)
T ss_dssp CCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHH-HCC---TTCEEEECSE-EEECCCBTTBCCCEEEC---CCCBTTBCE
T ss_pred ccCccEEEEcCCCCCCCCCccccCCccHHHHHh-hCC---CCCEEEECCC-eEccccccccceeEEec---CCCCCCCCE
Confidence 345678888765533 344233333 7999995 443 3789999999 999 2 345553 23 137
Q ss_pred EEEEeE----EEEccCC--CCccCCCccccEEEeeeeceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceE
Q 041224 94 NVQIQG----NIVAPHS--SAWDGHDKKKWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLT 167 (400)
Q Consensus 94 ~l~~~g----~i~~~~~--~~~~~~~~~~~i~~~~~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~ 167 (400)
+|...+ +|. ... ..|... ..-+.+ ..++++|+| -+|...+. ..|.+.. ++.+|++++
T Consensus 83 ti~~~~g~~~vI~-~~~~~g~~~~~--~~~i~i-~~~~~~i~g-l~I~n~g~-----------~GI~v~g-s~~~i~n~~ 145 (400)
T 1ru4_A 83 YVAAANCGRAVFD-FSFPDSQWVQA--SYGFYV-TGDYWYFKG-VEVTRAGY-----------QGAYVIG-SHNTFENTA 145 (400)
T ss_dssp EEEEGGGCCEEEE-CCCCTTCCCTT--CCSEEE-CSSCEEEES-EEEESCSS-----------CSEEECS-SSCEEESCE
T ss_pred EEEEecCCCCEEe-CCccCCccccc--eeEEEE-ECCeEEEEe-EEEEeCCC-----------CcEEEeC-CCcEEEeEE
Confidence 776641 333 111 111000 022444 346677777 33332221 1466665 788999999
Q ss_pred EeCCCCceEEEEeec-ceEEeceEEECCCC----CCCCCeeeecCc--ccEEEEeeEEec-CCceEEEcCCceeEEEEee
Q 041224 168 HVDSPGNHISVYGCN-DVSISNLKIIAPES----SPNTDGIDITHS--SNVQIRDCTIAT-GDDCVAIGTDTSNIAVTGV 239 (400)
Q Consensus 168 i~ns~~~~i~~~~~~-nv~i~~~~I~~~~~----~~n~DGi~i~~s--~nV~I~n~~i~~-~dD~i~i~s~~~ni~i~n~ 239 (400)
+.+....+|.+.... +.+|+++.|....+ ..+.|||.+..+ ++.+|++|+++. .||++.+......++|+||
T Consensus 146 i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i~nn 225 (400)
T 1ru4_A 146 FHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENS 225 (400)
T ss_dssp EESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEESC
T ss_pred EECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEEEEeE
Confidence 999877788888644 88999999987543 246799987643 788999999875 6889999776778999999
Q ss_pred EEcC--------------CceEEEeccCCCCCCCCEEEEEEEeeEEeCCc-ceEEEEeecCCCeeEEeEEEEeEEEecCC
Q 041224 240 ICGP--------------GHGISIGSLGANGGTSIVEDVHVRDCTFKGTK-NGARIKTWQGGSGHARRISFERIRLESSD 304 (400)
Q Consensus 240 ~~~~--------------~~gi~igs~g~~~~~~~i~ni~v~N~~~~~~~-~gi~i~~~~~~~g~i~nI~f~ni~~~~~~ 304 (400)
..+. +.|+.+|.+ ....+.+|+||...+.. +|+.....+ .+++++|+++.+-.
T Consensus 226 ~a~~Ng~~~~~~n~~~gngnGf~lgg~------~~~~~~~v~nn~a~~N~~~G~~~n~~~------~~~~i~nNt~~~N~ 293 (400)
T 1ru4_A 226 WAFRNGINYWNDSAFAGNGNGFKLGGN------QAVGNHRITRSVAFGNVSKGFDQNNNA------GGVTVINNTSYKNG 293 (400)
T ss_dssp EEESTTCCCSCCTTCCCCCCSEECCCT------TCCCCCEEESCEEESCSSEEEECTTCS------SCCEEESCEEESSS
T ss_pred EEECCccccccccccccCCCCEEEecc------CCcCCEEEEeeEEECCcCcCEeecCCC------CCEEEECeEEECCc
Confidence 8742 236777654 34567888999888753 466543211 23567777666544
Q ss_pred ccEEE
Q 041224 305 NPIII 309 (400)
Q Consensus 305 ~~i~i 309 (400)
..+.+
T Consensus 294 ~~~~~ 298 (400)
T 1ru4_A 294 INYGF 298 (400)
T ss_dssp EEEEE
T ss_pred cceEE
Confidence 44444
No 39
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.18 E-value=1.8e-10 Score=118.80 Aligned_cols=91 Identities=20% Similarity=0.319 Sum_probs=68.9
Q ss_pred CCeeEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCCEEEee-eeeecCCCCCCCeEEEEe--EEEEccC
Q 041224 29 YASSVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLN-PVSFQGPCKSSSINVQIQ--GNIVAPH 105 (400)
Q Consensus 29 ~~~~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~-~l~l~~~~ks~~v~l~~~--g~i~~~~ 105 (400)
....+||+||||+|||++|||+|||+||+ +.+ ++.+||||+| +|++. +|.+ ++ +++|..+ .+|....
T Consensus 397 ~~~~vnVkd~GA~GDG~tDDT~Ai~~al~-aa~---~g~~v~~P~G-~Y~vt~Ti~i----p~-~~~ivG~~~~~I~~~G 466 (758)
T 3eqn_A 397 PSDFVSVRSQGAKGDGHTDDTQAIKNVFA-KYA---GCKIIFFDAG-TYIVTDTIQI----PA-GTQIVGEVWSVIMGTG 466 (758)
T ss_dssp GGGEEETTTTTCCCEEEEECHHHHHHHHH-HHT---TTSEEECCSE-EEEESSCEEE----CT-TCEEECCSSEEEEECS
T ss_pred ccceEEeeeccccCCCCchhHHHHHHHHH-Hhc---CCCEEEECCC-EeEECCeEEc----CC-CCEEEecccceEecCC
Confidence 34689999999999999999999999996 333 4679999999 99995 8999 46 8999887 4565433
Q ss_pred CCCccC-CCccccEEE---eeeeceEEec
Q 041224 106 SSAWDG-HDKKKWLLF---SNVNGLTVNG 130 (400)
Q Consensus 106 ~~~~~~-~~~~~~i~~---~~~~nv~I~G 130 (400)
..|.. .++++++.+ .+.-.+.|.|
T Consensus 467 -~~F~d~~~P~pvv~VG~~gd~G~veisd 494 (758)
T 3eqn_A 467 -SKFTDYNNPQPVIQVGAPGSSGVVEITD 494 (758)
T ss_dssp -GGGCCTTSCEEEEEESCTTCBSCEEEES
T ss_pred -ccccCCCCCeeeEEeCCCCCCCeEEEEe
Confidence 33332 345677777 3345667776
No 40
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.12 E-value=2.2e-09 Score=108.01 Aligned_cols=204 Identities=8% Similarity=0.029 Sum_probs=113.7
Q ss_pred hHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeeeeecCCC-CCCCeEEEEe--E--EEEccCCCCccCCCccccEEEee
Q 041224 48 DSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPC-KSSSINVQIQ--G--NIVAPHSSAWDGHDKKKWLLFSN 122 (400)
Q Consensus 48 dt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l~l~~~~-ks~~v~l~~~--g--~i~~~~~~~~~~~~~~~~i~~~~ 122 (400)
+.+.||+||+ +++ .|++|++++| +|.-..+.+.+.. ..+.++|..+ + +|.+. ..+.+.+
T Consensus 30 ~~~~Lq~Ai~-~A~---pGDtI~L~~G-tY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~-----------~~l~i~g 93 (506)
T 1dbg_A 30 SNETLYQVVK-EVK---PGGLVQIADG-TYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD-----------AKVELRG 93 (506)
T ss_dssp SHHHHHHHHH-HCC---TTCEEEECSE-EEETCEEEECCCCBTTBCEEEEESSTTSEEEEES-----------CEEEECS
T ss_pred CHHHHHHHHH-hCC---CCCEEEECCC-EEecceEEEecCCcCCCCEEEECCCCCccEEeCC-----------ceEEEEc
Confidence 4578999995 444 3789999999 9985566662100 0125666653 1 12211 1233332
Q ss_pred eeceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCCc-eEEEE--------eecceEEeceEEEC
Q 041224 123 VNGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPGN-HISVY--------GCNDVSISNLKIIA 193 (400)
Q Consensus 123 ~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~~-~i~~~--------~~~nv~i~~~~I~~ 193 (400)
++++|+| -+|.+.+..-.. .....+..+.+. .++++|+++.|.+...- .+.+. ..++.+|+++.|..
T Consensus 94 -~~v~i~G-L~i~~~~~~~~~-~~~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~G 169 (506)
T 1dbg_A 94 -EHLILEG-IWFKDGNRAIQA-WKSHGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTD 169 (506)
T ss_dssp -SSEEEES-CEEEEECCCTTT-CCTTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEEC
T ss_pred -CCEEEEC-eEEECCCcceee-eecccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEEC
Confidence 5666666 233322210000 000012334444 58899999999876331 02222 56777899999987
Q ss_pred CCCCCCCC----eeeecC-------cccEEEEeeEEecC------CceEEEcC---CceeEEEEeeEEcCCc-eE---EE
Q 041224 194 PESSPNTD----GIDITH-------SSNVQIRDCTIATG------DDCVAIGT---DTSNIAVTGVICGPGH-GI---SI 249 (400)
Q Consensus 194 ~~~~~n~D----Gi~i~~-------s~nV~I~n~~i~~~------dD~i~i~s---~~~ni~i~n~~~~~~~-gi---~i 249 (400)
........ |++++. +.+.+|++++|... .+.+.++. .+.+.+|+++.+...+ |. ..
T Consensus 170 k~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~s 249 (506)
T 1dbg_A 170 KITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITS 249 (506)
T ss_dssp CCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEECSSSEEEEE
T ss_pred CcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECCEEEeccCcEEEEEE
Confidence 54333333 777775 36889999999853 35566652 2568888888876543 22 22
Q ss_pred eccCCCCCCCCEEEEEEEeeEEeCCcceEEEE
Q 041224 250 GSLGANGGTSIVEDVHVRDCTFKGTKNGARIK 281 (400)
Q Consensus 250 gs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~ 281 (400)
.| .+.+|+++++.+...++.+.
T Consensus 250 kS----------~~n~i~~N~~~~~~ggi~l~ 271 (506)
T 1dbg_A 250 KS----------QENVYYGNTYLNCQGTMNFR 271 (506)
T ss_dssp ES----------BSCEEESCEEESCSSEEEEE
T ss_pred ec----------CCEEEECCEEEcccCcEEEe
Confidence 22 12356666666655555443
No 41
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.70 E-value=2e-07 Score=89.96 Aligned_cols=153 Identities=14% Similarity=0.202 Sum_probs=86.5
Q ss_pred chHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeeeeecCCCCCCCeEEEEeEEEEccCCCCccCCCccccEEEeeeece
Q 041224 47 DDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPCKSSSINVQIQGNIVAPHSSAWDGHDKKKWLLFSNVNGL 126 (400)
Q Consensus 47 ddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l~l~~~~ks~~v~l~~~g~i~~~~~~~~~~~~~~~~i~~~~~~nv 126 (400)
-|-..||+||+++.... ...+|+|++| +|.- .|.+. |. +++|..+|. +..
T Consensus 42 g~f~TIq~Ai~aa~~~~-~~~~I~I~~G-~Y~E-~v~I~---k~-~itl~G~g~-----------------------~~T 91 (364)
T 3uw0_A 42 DEFSSINAALKSAPKDD-TPFIIFLKNG-VYTE-RLEVA---RS-HVTLKGENR-----------------------DGT 91 (364)
T ss_dssp --CCCHHHHHHHSCSSS-SCEEEEECSE-EECC-CEEEC---ST-TEEEEESCT-----------------------TTE
T ss_pred CCcccHHHHHhhcccCC-CcEEEEEeCC-EEEE-EEEEc---CC-eEEEEecCC-----------------------CCe
Confidence 45678999995443321 2348999999 9964 45553 45 788776641 011
Q ss_pred EEecC---eeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCC--------------------ceEEEE-eec
Q 041224 127 TVNGN---GKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPG--------------------NHISVY-GCN 182 (400)
Q Consensus 127 ~I~G~---G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~--------------------~~i~~~-~~~ 182 (400)
.|++. ++...++..+-. .+...+.+ .+++++++|++|+|+.. -.+.+. ..+
T Consensus 92 iIt~~~~~~~~~~~g~~~gt----~~saTv~V-~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D 166 (364)
T 3uw0_A 92 VIGANTAAGMLNPQGEKWGT----SGSSTVLV-NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSD 166 (364)
T ss_dssp EEEECCCTTSBCTTCSBCCT----TTCCSEEE-CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCE
T ss_pred EEEccccccccccccccccc----cCeeEEEE-ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCC
Confidence 11111 011111111100 11123444 57899999999998742 124333 367
Q ss_pred ceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEc
Q 041224 183 DVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICG 242 (400)
Q Consensus 183 nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~ 242 (400)
...+.+|.+... .|.+......+..+++|+|...-|-|-= . ....++||++.
T Consensus 167 ~~~f~~C~f~G~-----QDTLy~~~~gr~yf~~c~I~GtvDFIFG-~--a~a~f~~c~i~ 218 (364)
T 3uw0_A 167 KARFKAVKLEGY-----QDTLYSKTGSRSYFSDCEISGHVDFIFG-S--GITVFDNCNIV 218 (364)
T ss_dssp EEEEEEEEEECS-----BSCEEECTTCEEEEESCEEEESEEEEEE-S--SEEEEESCEEE
T ss_pred eEEEEeeEEEec-----ccceEeCCCCCEEEEcCEEEcCCCEECC-c--ceEEEEeeEEE
Confidence 777888888763 4566665446777888888776565532 2 35677777764
No 42
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.67 E-value=2.7e-06 Score=81.11 Aligned_cols=106 Identities=18% Similarity=0.150 Sum_probs=69.4
Q ss_pred EEEeeeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEecC-CceEEEcCCc
Q 041224 153 LSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATG-DDCVAIGTDT 231 (400)
Q Consensus 153 i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~-dD~i~i~s~~ 231 (400)
|.+.+++||.|++++|++.... + .........|+|.+..++||.|++|.+... |..+.++.++
T Consensus 85 i~I~~a~NVIIrnl~i~~~~~~-------------~---~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s 148 (340)
T 3zsc_A 85 LVIKDAQNVIIRNIHFEGFYME-------------D---DPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKYS 148 (340)
T ss_dssp EEEESCEEEEEESCEEECCCCT-------------T---CTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEETTC
T ss_pred eEEEcCceEEEeCeEEECCccc-------------c---CccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEecCC
Confidence 5556677777777777764210 0 000011257899999999999999999875 5558888778
Q ss_pred eeEEEEeeEEcCCc-eEEEeccCCCC--CCCCEEEEEEEeeEEeCC
Q 041224 232 SNIAVTGVICGPGH-GISIGSLGANG--GTSIVEDVHVRDCTFKGT 274 (400)
Q Consensus 232 ~ni~i~n~~~~~~~-gi~igs~g~~~--~~~~i~ni~v~N~~~~~~ 274 (400)
.+|+|+||.|.... ++-+|+.-... ....-.+|+|.++.+.+.
T Consensus 149 ~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~ 194 (340)
T 3zsc_A 149 NYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNL 194 (340)
T ss_dssp EEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESC
T ss_pred ceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCC
Confidence 99999999998643 56676531000 000124788988888775
No 43
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.66 E-value=1.4e-06 Score=83.93 Aligned_cols=108 Identities=20% Similarity=0.220 Sum_probs=73.7
Q ss_pred eEEEeeeCcEEEEceEEeCCC----CceEEEEeecceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEecC------
Q 041224 152 ALSFGSCNNLVFRGLTHVDSP----GNHISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATG------ 221 (400)
Q Consensus 152 ~i~~~~~~nv~i~~v~i~ns~----~~~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~------ 221 (400)
.|.+.+++||.|++++|++.. .|. . ...+..+.|+|.+.+++||.|++|.+..+
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~--~--------------~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~ 160 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYE--S--------------GDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDK 160 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccc--c--------------ccCccccCceEEecCCCcEEEEeeEEeccccCccc
Confidence 366667788888888887642 111 0 00011357899999999999999999863
Q ss_pred ------------CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCCC-CCCCEEEEEEEeeEEeCCc
Q 041224 222 ------------DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGANG-GTSIVEDVHVRDCTFKGTK 275 (400)
Q Consensus 222 ------------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~-~~~~i~ni~v~N~~~~~~~ 275 (400)
|..+.++.++++|+|++|.|.... ++-+|+.-... ......+|+|.++.+.+..
T Consensus 161 ~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 161 YTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVT 228 (355)
T ss_pred cccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCc
Confidence 556778777899999999998654 67777642111 1113458999999998753
No 44
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.64 E-value=1.5e-06 Score=82.59 Aligned_cols=156 Identities=16% Similarity=0.211 Sum_probs=97.4
Q ss_pred eeceEEecCe---eEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCCCCCC
Q 041224 123 VNGLTVNGNG---KIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSPN 199 (400)
Q Consensus 123 ~~nv~I~G~G---~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~~~n 199 (400)
.+|++|.|.| +|++. .|.+.+++||.|++++|++.. ...
T Consensus 78 ~sn~TI~G~g~~~~i~G~--------------gl~i~~a~NVIIrNl~i~~~~------------------------~~~ 119 (326)
T 3vmv_A 78 IKNISIIGVGTNGEFDGI--------------GIRLSNAHNIIIQNVSIHHVR------------------------EGE 119 (326)
T ss_dssp EEEEEEEECTTCCEEESC--------------CEEEESEEEEEEESCEEECCC------------------------STT
T ss_pred CCCeEEEecCCCeEEeCc--------------EEEEEecceEEEECeEEEcCC------------------------CCC
Confidence 4788888864 44432 255556666666666666532 135
Q ss_pred CCeeeecC-cccEEEEeeEEec----------CCceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCCCCCCCEEEEEEE
Q 041224 200 TDGIDITH-SSNVQIRDCTIAT----------GDDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGANGGTSIVEDVHVR 267 (400)
Q Consensus 200 ~DGi~i~~-s~nV~I~n~~i~~----------~dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~i~ni~v~ 267 (400)
.|+|.+.. ++||.|++|.+.. .|..+.++.++.+|+|+||.|.... ++-+|+.-.. ...-.+|+|.
T Consensus 120 ~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~--~~~~~~vT~~ 197 (326)
T 3vmv_A 120 GTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDNA--SLAPDKITYH 197 (326)
T ss_dssp SCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSCG--GGCCEEEEEE
T ss_pred CCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCCCCC--cccCccEEEE
Confidence 78899986 8999999999963 3667888888999999999997533 5777764110 1112589999
Q ss_pred eeEEeCCcc-eEEEEeecCCCeeEEeEEEEeEEEecCCccEEEEeeecCCCCCCCCCCcceeEEeEEEEeE
Q 041224 268 DCTFKGTKN-GARIKTWQGGSGHARRISFERIRLESSDNPIIIDQYYCGPNGDCKNQTSAVKVSDVSYIGF 337 (400)
Q Consensus 268 N~~~~~~~~-gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nItf~nI 337 (400)
++.+.+... .-++. .+..++-|-.|.|.. .+++...+ .....+++-.|++.
T Consensus 198 ~N~f~~~~~R~Pr~r---~G~~Hv~NN~~~n~~----~~~~~~~~------------~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 198 HNYFNNLNSRVPLIR---YADVHMFNNYFKDIN----DTAINSRV------------GARVFVENNYFDNV 249 (326)
T ss_dssp SCEEEEEEECTTEEE---SCEEEEESCEEEEES----SCSEEEET------------TCEEEEESCEEEEE
T ss_pred eeEecCCcCcCCccc---CCcEEEEccEEECCC----ceEEeecC------------CcEEEEEceEEECC
Confidence 999876421 12332 112344444444431 24443331 14467888889887
No 45
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.57 E-value=4e-06 Score=79.55 Aligned_cols=208 Identities=13% Similarity=0.155 Sum_probs=124.2
Q ss_pred hHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeeeeecCCCCCCCeEEEEeEEEEccCCCCccCCCccccEEEeeeeceE
Q 041224 48 DSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPCKSSSINVQIQGNIVAPHSSAWDGHDKKKWLLFSNVNGLT 127 (400)
Q Consensus 48 dt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l~l~~~~ks~~v~l~~~g~i~~~~~~~~~~~~~~~~i~~~~~~nv~ 127 (400)
|-..||+||+++........+|+|++| +|+- .|.+... |. +++|..+|. +...
T Consensus 18 ~f~TIq~AI~aap~~~~~~~~I~I~~G-~Y~E-~V~I~~~-k~-~Itl~G~g~-----------------------~~ti 70 (319)
T 1gq8_A 18 DYKTVSEAVAAAPEDSKTRYVIRIKAG-VYRE-NVDVPKK-KK-NIMFLGDGR-----------------------TSTI 70 (319)
T ss_dssp SBSSHHHHHHHSCSSCSSCEEEEECSE-EEEC-CEEECTT-CC-SEEEEESCT-----------------------TTEE
T ss_pred CccCHHHHHHhccccCCceEEEEEcCC-eEee-eeeccCC-Cc-cEEEEEcCC-----------------------CccE
Confidence 456699999544332111248999999 9964 5555321 33 677765531 1222
Q ss_pred EecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCC------ceEEEEeecceEEeceEEECCCCCCCCC
Q 041224 128 VNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPG------NHISVYGCNDVSISNLKIIAPESSPNTD 201 (400)
Q Consensus 128 I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~------~~i~~~~~~nv~i~~~~I~~~~~~~n~D 201 (400)
|.|.+.. ..+ +. ..+...+.+ .+++++++|++|+|+.. -.+.+ .++++.+.+|++... .|
T Consensus 71 I~~~~~~-~~g---~~---t~~satv~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~-----QD 136 (319)
T 1gq8_A 71 ITASKNV-QDG---ST---TFNSATVAA-VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAY-----QD 136 (319)
T ss_dssp EEECCCT-TTT---CC---TGGGCSEEE-CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECS-----TT
T ss_pred EEecccc-cCC---CC---ccceEEEEE-ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECcc-----ce
Confidence 2221100 000 00 001223555 48899999999998642 34555 578899999999984 57
Q ss_pred eeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCC------ce-EEEeccCCCCCCCCEEEEEEEeeEEeCC
Q 041224 202 GIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPG------HG-ISIGSLGANGGTSIVEDVHVRDCTFKGT 274 (400)
Q Consensus 202 Gi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~------~g-i~igs~g~~~~~~~i~ni~v~N~~~~~~ 274 (400)
++.....+ ..+++|+|...-|.|. +. ....+++|.+..- .+ |.--+ . .+...-..+.|.||++...
T Consensus 137 TLy~~~~r-~~~~~c~I~G~vDFIf-G~--~~a~f~~c~i~~~~~~~~~~~~itA~~--r-~~~~~~~G~vf~~c~i~~~ 209 (319)
T 1gq8_A 137 SLYVHSNR-QFFINCFIAGTVDFIF-GN--AAVVLQDCDIHARRPGSGQKNMVTAQG--R-TDPNQNTGIVIQKSRIGAT 209 (319)
T ss_dssp CEEECSSE-EEEESCEEEESSSCEE-ES--CEEEEESCEEEECCCSTTCCEEEEEEC--C-CSTTCCCEEEEESCEEEEC
T ss_pred eeeecCcc-EEEEecEEEeeeeEEe-cC--CcEEEEeeEEEEecCCCCCceEEEeCC--C-CCCCCCceEEEECCEEecC
Confidence 78777655 5999999998877764 32 3588999988531 12 32211 1 1234556799999999865
Q ss_pred cc--------eEEEEeecCCCeeEEeEEEEeEEEecCCcc
Q 041224 275 KN--------GARIKTWQGGSGHARRISFERIRLESSDNP 306 (400)
Q Consensus 275 ~~--------gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~ 306 (400)
.. ..++.=-+ ..-..+.|.+..|.+.=.|
T Consensus 210 ~~~~~~~~~~~~yLGRpW---~~~sr~v~~~t~~~~~I~p 246 (319)
T 1gq8_A 210 SDLQPVQSSFPTYLGRPW---KEYSRTVVMQSSITNVINP 246 (319)
T ss_dssp TTTGGGGGGSCEEEECCS---STTCEEEEESCEECTTBCT
T ss_pred CCccccccceeEEecccC---CCcceEEEEeccCCCcccc
Confidence 42 23332111 2234688889888875333
No 46
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.56 E-value=2.2e-06 Score=82.39 Aligned_cols=132 Identities=14% Similarity=0.199 Sum_probs=85.2
Q ss_pred eceEEecCe---eEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCC-CceEEEEeecceEEeceEEECCCCCCC
Q 041224 124 NGLTVNGNG---KIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSP-GNHISVYGCNDVSISNLKIIAPESSPN 199 (400)
Q Consensus 124 ~nv~I~G~G---~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~-~~~i~~~~~~nv~i~~~~I~~~~~~~n 199 (400)
++++|.|.| .|.+.| ..|.+..++||.|++++|++.. .+.-.+.....-. .--. ....
T Consensus 88 sn~TI~G~ga~~~i~G~G------------~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~---~g~~---~~~~ 149 (346)
T 1pxz_A 88 GHKTIDGRGADVHLGNGG------------PCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIG---VEPV---HAQD 149 (346)
T ss_dssp SSEEEECTTSCEEEETTS------------CCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTE---EEEE---CCCC
T ss_pred CCeEEEccCCceEEeCCc------------ceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcc---cccc---cCCC
Confidence 577887753 444422 2467778888888888887752 1111010000000 0000 1246
Q ss_pred CCeeeecCcccEEEEeeEEecCCceE-EEcCCceeEEEEeeEEcCCc-eEEEeccCCCCCCCCEEEEEEEeeEE-eCC
Q 041224 200 TDGIDITHSSNVQIRDCTIATGDDCV-AIGTDTSNIAVTGVICGPGH-GISIGSLGANGGTSIVEDVHVRDCTF-KGT 274 (400)
Q Consensus 200 ~DGi~i~~s~nV~I~n~~i~~~dD~i-~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~i~ni~v~N~~~-~~~ 274 (400)
.|||.+.+++||.|++|.+....|++ .++.++++|+|+||.|.... ++-+|+.-... .....+|+|.++.+ .+.
T Consensus 150 ~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~-~d~~~~vT~~~N~f~~~~ 226 (346)
T 1pxz_A 150 GDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYD-DDKSMKVTVAFNQFGPNA 226 (346)
T ss_dssp CCSEEEESCEEEEEESCEEECCSSEEEEEESSCEEEEEESCEEESEEEEEEESCCSSCG-GGGGCEEEEESCEECSSE
T ss_pred CCEEEEecCceEEEEeeEEecCCCCcEeeccCcceEEEEeeEEecCCceeEECCCCccc-cCCceEEEEEeeEEeCCc
Confidence 89999999999999999999987775 67667999999999998643 67787642111 12235899999999 654
No 47
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.56 E-value=2.8e-06 Score=81.63 Aligned_cols=196 Identities=11% Similarity=0.081 Sum_probs=114.4
Q ss_pred HHHHHHHHHhcCCCCCceEEe-cCCCEEEe-eeeeecCCCCCCCeEEEEeE---EEEccCCCCccCCCccccEEEeeeec
Q 041224 51 AFLKAWKSICGSKSNAAPLLV-PAGKTFLL-NPVSFQGPCKSSSINVQIQG---NIVAPHSSAWDGHDKKKWLLFSNVNG 125 (400)
Q Consensus 51 aiq~Ai~~a~~~~~gg~~v~i-P~G~~Y~~-~~l~l~~~~ks~~v~l~~~g---~i~~~~~~~~~~~~~~~~i~~~~~~n 125 (400)
.|+.|+. +. +..+|+| ..| ++.+ +.|.+ .+ ++||...| .|... +.-|.+.+++|
T Consensus 57 sLr~av~-~~----~P~~Ivf~~~g-~I~l~~~l~V----~s-n~TI~G~ga~~~i~G~----------G~gi~i~~a~N 115 (346)
T 1pxz_A 57 TLRYGAT-RE----KALWIIFSQNM-NIKLKMPLYV----AG-HKTIDGRGADVHLGNG----------GPCLFMRKVSH 115 (346)
T ss_dssp SHHHHHH-CS----SCEEEEESSCE-EECCSSCEEC----CS-SEEEECTTSCEEEETT----------SCCEEEESCEE
T ss_pred hhHHHhc-cC----CCeEEEEcCCc-EEecCccEEe----cC-CeEEEccCCceEEeCC----------cceEEEEccCC
Confidence 4888884 22 3456666 557 8877 47887 46 89888752 33310 12255567788
Q ss_pred eEEecCeeEeCCCc--c-ccccCCCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCCCCCCCCe
Q 041224 126 LTVNGNGKIDGKGA--S-WWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSPNTDG 202 (400)
Q Consensus 126 v~I~G~G~idg~g~--~-~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~~~n~DG 202 (400)
|.|++--+-+.... . .|.. +|.-. +. -..+...+|.+..+++|.|++|++... .||
T Consensus 116 VIIrnl~i~~~~~~~~~~I~~~----~~~~~-----------g~-~~~~~~DaI~i~~s~nVwIDHcs~s~~-----~Dg 174 (346)
T 1pxz_A 116 VILHSLHIHGCNTSVLGDVLVS----ESIGV-----------EP-VHAQDGDAITMRNVTNAWIDHNSLSDC-----SDG 174 (346)
T ss_dssp EEEESCEEECCCCCCSEEEEEE----TTTEE-----------EE-ECCCCCCSEEEESCEEEEEESCEEECC-----SSE
T ss_pred EEEEeeEEEeeccCCCceEEec----cCccc-----------cc-ccCCCCCEEEEecCceEEEEeeEEecC-----CCC
Confidence 88887433222100 0 0000 00000 00 012334567777778888888888763 577
Q ss_pred e-ee-cCcccEEEEeeEEecCCceEEEcCC-------ceeEEEEeeEE-cCCc--eEEEeccCCCCCCCCEEEEEEEeeE
Q 041224 203 I-DI-THSSNVQIRDCTIATGDDCVAIGTD-------TSNIAVTGVIC-GPGH--GISIGSLGANGGTSIVEDVHVRDCT 270 (400)
Q Consensus 203 i-~i-~~s~nV~I~n~~i~~~dD~i~i~s~-------~~ni~i~n~~~-~~~~--gi~igs~g~~~~~~~i~ni~v~N~~ 270 (400)
+ ++ ..+++|+|++|+|...+.+.-+++. ..+|++.++.+ .+.. .-.+.. ..++|.|+.
T Consensus 175 ~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~----------g~~hv~NN~ 244 (346)
T 1pxz_A 175 LIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARY----------GLVHVANNN 244 (346)
T ss_dssp EEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEES----------SEEEEESCE
T ss_pred cEeeccCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEec----------ceEEEEeeE
Confidence 6 66 5789999999999877666666542 23899999998 4322 112211 258889999
Q ss_pred EeCCc-ceEEEEeecCCCeeEEeEEEEeEEEecCCc
Q 041224 271 FKGTK-NGARIKTWQGGSGHARRISFERIRLESSDN 305 (400)
Q Consensus 271 ~~~~~-~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~ 305 (400)
+.+.. +++.... -..+.+|+..++....
T Consensus 245 ~~~~~~~~i~~~~-------~~~i~~egN~F~~~~~ 273 (346)
T 1pxz_A 245 YDPWNIYAIGGSS-------NPTILSEGNSFTAPSE 273 (346)
T ss_dssp ECCCSSCSEEEES-------CCEEEEESCEEECCSC
T ss_pred EEcccceEEeccC-------CceEEEECCEEECCCC
Confidence 88743 3443321 1357777777776543
No 48
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.55 E-value=5.8e-06 Score=78.36 Aligned_cols=208 Identities=14% Similarity=0.159 Sum_probs=124.3
Q ss_pred hHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeeeeecCCCCCCCeEEEEeEEEEccCCCCccCCCccccEEEeeeeceE
Q 041224 48 DSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPCKSSSINVQIQGNIVAPHSSAWDGHDKKKWLLFSNVNGLT 127 (400)
Q Consensus 48 dt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l~l~~~~ks~~v~l~~~g~i~~~~~~~~~~~~~~~~i~~~~~~nv~ 127 (400)
|-..||+||+++........+|+|++| +|.- .|.+... |. +++|..+|. +...
T Consensus 14 ~f~TIq~AI~aap~~~~~~~~I~I~~G-~Y~E-~V~I~~~-k~-~Itl~G~g~-----------------------~~ti 66 (317)
T 1xg2_A 14 DYQTLAEAVAAAPDKSKTRYVIYVKRG-TYKE-NVEVASN-KM-NLMIVGDGM-----------------------YATT 66 (317)
T ss_dssp SBSSHHHHHHHSCSSCSSCEEEEECSE-EEEC-CEEECTT-SC-SEEEEESCT-----------------------TTEE
T ss_pred CcccHHHHHhhcccCCCceEEEEEcCC-EEee-eeecCCC-CC-cEEEEEcCC-----------------------CCcE
Confidence 455699999544332111238999999 9964 4555321 34 677765531 1222
Q ss_pred EecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCC------ceEEEEeecceEEeceEEECCCCCCCCC
Q 041224 128 VNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPG------NHISVYGCNDVSISNLKIIAPESSPNTD 201 (400)
Q Consensus 128 I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~------~~i~~~~~~nv~i~~~~I~~~~~~~n~D 201 (400)
|.|.+.. ..+ +. ..+...+.+ .+++++++|++|+|+.. -.+.+ .++++.+.+|++... .|
T Consensus 67 I~~~~~~-~~g---~~---t~~satv~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~-----QD 132 (317)
T 1xg2_A 67 ITGSLNV-VDG---ST---TFRSATLAA-VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAY-----QD 132 (317)
T ss_dssp EEECCCT-TTT---CC---SGGGCSEEE-CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECS-----TT
T ss_pred EEecccc-cCC---Cc---ccceeEEEE-ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCcc-----cc
Confidence 2221100 000 00 001223555 68899999999998742 34555 578899999999984 57
Q ss_pred eeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCC------ce-EEEeccCCCCCCCCEEEEEEEeeEEeCC
Q 041224 202 GIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPG------HG-ISIGSLGANGGTSIVEDVHVRDCTFKGT 274 (400)
Q Consensus 202 Gi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~------~g-i~igs~g~~~~~~~i~ni~v~N~~~~~~ 274 (400)
++.....++ .+++|+|...-|-|. +. ....+++|.+..- .+ +.--+ . .+...-....|.||++...
T Consensus 133 TLy~~~~r~-~~~~c~I~G~vDFIf-G~--~~avf~~c~i~~~~~~~~~~~~itA~~--r-~~~~~~~G~vf~~c~i~~~ 205 (317)
T 1xg2_A 133 TLYAHSQRQ-FYRDSYVTGTVDFIF-GN--AAVVFQKCQLVARKPGKYQQNMVTAQG--R-TDPNQATGTSIQFCNIIAS 205 (317)
T ss_dssp CEEECSSEE-EEESCEEEESSSCEE-EC--CEEEEESCEEEECCCSTTCCEEEEEEC--C-CCTTSCCEEEEESCEEEEC
T ss_pred ceeecCccE-EEEeeEEEeceeEEc-CC--ceEEEeeeEEEEeccCCCCccEEEecC--c-CCCCCCcEEEEECCEEecC
Confidence 777776554 899999998877764 32 3588999988531 22 32211 1 1234566799999999865
Q ss_pred cc--------eEEEEeecCCCeeEEeEEEEeEEEecCCcc
Q 041224 275 KN--------GARIKTWQGGSGHARRISFERIRLESSDNP 306 (400)
Q Consensus 275 ~~--------gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~ 306 (400)
.. ..++.=-+ ..-..+.|.+..|.+.=.|
T Consensus 206 ~~~~~~~~~~~~yLGRpW---~~~sr~v~~~t~~~~~I~p 242 (317)
T 1xg2_A 206 SDLEPVLKEFPTYLGRPW---KEYSRTVVMESYLGGLINP 242 (317)
T ss_dssp TTTGGGTTTSCEEEECCS---STTCEEEEESCEECTTBCT
T ss_pred CCccccccceeEEeeccc---CCCceEEEEecccCCcccc
Confidence 42 23332111 2234688999988875433
No 49
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.40 E-value=1e-05 Score=77.90 Aligned_cols=67 Identities=19% Similarity=0.243 Sum_probs=48.3
Q ss_pred CCCeeeecCcccEEEEeeEEec-CCceEEE-cCCceeEEEEeeEEcCC----------c--eEEE-eccCCCCCCCCEEE
Q 041224 199 NTDGIDITHSSNVQIRDCTIAT-GDDCVAI-GTDTSNIAVTGVICGPG----------H--GISI-GSLGANGGTSIVED 263 (400)
Q Consensus 199 n~DGi~i~~s~nV~I~n~~i~~-~dD~i~i-~s~~~ni~i~n~~~~~~----------~--gi~i-gs~g~~~~~~~i~n 263 (400)
..|+|.+..++||.|++|.+.. +|..+.. +.++++|+|++|.|... | +..+ |+ ..+
T Consensus 152 g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~---------sd~ 222 (359)
T 1idk_A 152 GGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGD---------ADL 222 (359)
T ss_dssp SCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCS---------SCE
T ss_pred cCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCccccceEEEEec---------CCC
Confidence 5688999889999999999985 5666654 44688999999999632 1 2222 22 137
Q ss_pred EEEEeeEEeCC
Q 041224 264 VHVRDCTFKGT 274 (400)
Q Consensus 264 i~v~N~~~~~~ 274 (400)
++|.++.+.+.
T Consensus 223 vT~hhN~f~~~ 233 (359)
T 1idk_A 223 VTMKGNYIYHT 233 (359)
T ss_dssp EEEESCEEESB
T ss_pred eEEEceEeecC
Confidence 89999988864
No 50
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.40 E-value=5.3e-06 Score=79.78 Aligned_cols=72 Identities=15% Similarity=0.144 Sum_probs=52.1
Q ss_pred CCCeeeecCcccEEEEeeEEecC--------------CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCCCCCCCEEE
Q 041224 199 NTDGIDITHSSNVQIRDCTIATG--------------DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGANGGTSIVED 263 (400)
Q Consensus 199 n~DGi~i~~s~nV~I~n~~i~~~--------------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~i~n 263 (400)
+.|+|.+.+++||.|++|.+..+ |..+.++.++++|+|++|.|...+ +..+|+.-. ..+ .+
T Consensus 129 ~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~--~~g--~~ 204 (353)
T 1air_A 129 DGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSS--DTG--RN 204 (353)
T ss_dssp TCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTT--CCC--CE
T ss_pred CCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcC--CCC--ce
Confidence 56888888888899988888642 556777777899999999987543 455665411 112 68
Q ss_pred EEEEeeEEeCC
Q 041224 264 VHVRDCTFKGT 274 (400)
Q Consensus 264 i~v~N~~~~~~ 274 (400)
|+|.++.+.+.
T Consensus 205 vT~hhN~f~~~ 215 (353)
T 1air_A 205 ITYHHNYYNDV 215 (353)
T ss_dssp EEEESCEEEEE
T ss_pred EEEEceEEcCC
Confidence 99999988764
No 51
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.36 E-value=1.5e-05 Score=75.97 Aligned_cols=51 Identities=14% Similarity=0.187 Sum_probs=24.5
Q ss_pred CCceEEEcCCceeEEEEeeEEcCC-ce-EEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEE
Q 041224 221 GDDCVAIGTDTSNIAVTGVICGPG-HG-ISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARI 280 (400)
Q Consensus 221 ~dD~i~i~s~~~ni~i~n~~~~~~-~g-i~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i 280 (400)
+.|+|.+.. ++||-|++|.+..+ +| +.+. ....+|+|+||.|.+...+.-+
T Consensus 115 ~~DaI~i~~-s~nVWIDHcs~s~~~Dg~idi~--------~~s~~vTISnn~f~~h~k~~Li 167 (340)
T 3zsc_A 115 DFDYINVEN-SHHIWIDHITFVNGNDGAVDIK--------KYSNYITVSWNKFVDHDKVSLV 167 (340)
T ss_dssp CCCSEEEES-CEEEEEESCEEESCSSCSEEEE--------TTCEEEEEESCEEESCSBCCEE
T ss_pred CCCeEEEec-CCcEEEEeeeeccCCccceEEe--------cCCceEEEECcEeccCceeeEe
Confidence 345555544 55555555555443 23 3332 1235555555555554444333
No 52
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.36 E-value=7.2e-06 Score=78.29 Aligned_cols=75 Identities=11% Similarity=0.128 Sum_probs=51.6
Q ss_pred CCCeeeec-----CcccEEEEeeEEecC------------CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCCCCCCC
Q 041224 199 NTDGIDIT-----HSSNVQIRDCTIATG------------DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGANGGTSI 260 (400)
Q Consensus 199 n~DGi~i~-----~s~nV~I~n~~i~~~------------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~ 260 (400)
..|+|.+. .++||.|++|.+..+ |..+.++.++.+|+|++|.|.... ++-+|+.-... ...
T Consensus 112 ~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~-~~~ 190 (330)
T 2qy1_A 112 DADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDT-KNS 190 (330)
T ss_dssp GCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCG-GGG
T ss_pred CCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCccc-cCC
Confidence 46888887 488888888888532 556777777899999999997543 46666531110 111
Q ss_pred EEEEEEEeeEEeCC
Q 041224 261 VEDVHVRDCTFKGT 274 (400)
Q Consensus 261 i~ni~v~N~~~~~~ 274 (400)
..+|+|.++.+.+.
T Consensus 191 ~~~vT~h~N~f~~~ 204 (330)
T 2qy1_A 191 AARTTYHHNRFENV 204 (330)
T ss_dssp GCEEEEESCEEEEE
T ss_pred CceEEEECcEEcCC
Confidence 25899999988764
No 53
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.32 E-value=1.1e-05 Score=76.99 Aligned_cols=140 Identities=14% Similarity=0.144 Sum_probs=94.0
Q ss_pred eEEEe-eeCcEEEEceEEeCCC----CceEEEE-----eecceEEeceEEECCCCC------CCCCe-eeec-CcccEEE
Q 041224 152 ALSFG-SCNNLVFRGLTHVDSP----GNHISVY-----GCNDVSISNLKIIAPESS------PNTDG-IDIT-HSSNVQI 213 (400)
Q Consensus 152 ~i~~~-~~~nv~i~~v~i~ns~----~~~i~~~-----~~~nv~i~~~~I~~~~~~------~n~DG-i~i~-~s~nV~I 213 (400)
.|.+. +++||.|++++|++.. ..+|.+. .+++|.|++|++....+. .-.|| +++. .+.+|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 57887 8999999999999764 4679998 599999999999743210 11255 4654 5899999
Q ss_pred EeeEEecCCceEEEcCC-------ceeEEEEeeEEcCCc--eEEEeccCCCCCCCCEEEEEEEeeEEeCC-cceEEEEee
Q 041224 214 RDCTIATGDDCVAIGTD-------TSNIAVTGVICGPGH--GISIGSLGANGGTSIVEDVHVRDCTFKGT-KNGARIKTW 283 (400)
Q Consensus 214 ~n~~i~~~dD~i~i~s~-------~~ni~i~n~~~~~~~--gi~igs~g~~~~~~~i~ni~v~N~~~~~~-~~gi~i~~~ 283 (400)
++|+|...+-+.-+++. ..+|++.++.+.+.. .=++. .+ .+++.|+.+.+. .+++....
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r-------~G---~~hv~NN~~~n~~~~~i~~~~- 235 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQR-------FG---LSHIYNNYFNNVTTSGINVRM- 235 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEE-------SS---EEEEESCEEEEECSCSEEEET-
T ss_pred EcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCCCCcee-------cc---eEEEEeeEEEcccceEeccCC-
Confidence 99999876655555542 158999999985421 11221 11 378888888764 34554322
Q ss_pred cCCCeeEEeEEEEeEEEecCCccEE
Q 041224 284 QGGSGHARRISFERIRLESSDNPII 308 (400)
Q Consensus 284 ~~~~g~i~nI~f~ni~~~~~~~~i~ 308 (400)
+ ..|.+|+..+++.+.|+.
T Consensus 236 -~-----~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 236 -G-----GIAKIESNYFENIKNPVT 254 (330)
T ss_dssp -T-----CEEEEESCEEEEEESSEE
T ss_pred -C-----cEEEEEccEEECCCCcee
Confidence 2 245666666666666643
No 54
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.21 E-value=2.6e-05 Score=75.16 Aligned_cols=67 Identities=19% Similarity=0.192 Sum_probs=47.4
Q ss_pred CCCeeeecCcccEEEEeeEEecC-CceEE-EcCCceeEEEEeeEEcCC----------c--e-EEEeccCCCCCCCCEEE
Q 041224 199 NTDGIDITHSSNVQIRDCTIATG-DDCVA-IGTDTSNIAVTGVICGPG----------H--G-ISIGSLGANGGTSIVED 263 (400)
Q Consensus 199 n~DGi~i~~s~nV~I~n~~i~~~-dD~i~-i~s~~~ni~i~n~~~~~~----------~--g-i~igs~g~~~~~~~i~n 263 (400)
..|+|.+..++||.|++|.+... |..+. ...++++|+|+||.|... | + +-+|+ ..+
T Consensus 152 ~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~---------sd~ 222 (359)
T 1qcx_A 152 GGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGS---------NDM 222 (359)
T ss_dssp SCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCS---------SEE
T ss_pred cCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCcccccceeEEecC---------CCC
Confidence 46889888899999999998764 44443 344688999999999632 2 2 22332 247
Q ss_pred EEEEeeEEeCC
Q 041224 264 VHVRDCTFKGT 274 (400)
Q Consensus 264 i~v~N~~~~~~ 274 (400)
++|.++.+.+.
T Consensus 223 vT~~~N~f~~~ 233 (359)
T 1qcx_A 223 VTLKGNYFYNL 233 (359)
T ss_dssp EEEESCEEESB
T ss_pred eehcccEeccC
Confidence 89999988764
No 55
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.21 E-value=5.3e-06 Score=81.31 Aligned_cols=76 Identities=21% Similarity=0.211 Sum_probs=55.9
Q ss_pred CCCeeeecCcccEEEEeeEEecC------------------CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCCCCCC
Q 041224 199 NTDGIDITHSSNVQIRDCTIATG------------------DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGANGGTS 259 (400)
Q Consensus 199 n~DGi~i~~s~nV~I~n~~i~~~------------------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~ 259 (400)
+.|+|.+.+++||.|++|.+..+ |..+.++.++++|+|++|.|.... ++-+|+.-......
T Consensus 188 ~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~ 267 (416)
T 1vbl_A 188 EYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADS 267 (416)
T ss_dssp CCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGT
T ss_pred CCceEEecCCceEEEEccEEecCCCcccccccccCcceeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccC
Confidence 56899999999999999999854 667788878999999999997543 56777642111111
Q ss_pred CEEEEEEEeeEEeCC
Q 041224 260 IVEDVHVRDCTFKGT 274 (400)
Q Consensus 260 ~i~ni~v~N~~~~~~ 274 (400)
.--+|+|.++.+.+.
T Consensus 268 g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 268 GHLRVTLHHNYYKNV 282 (416)
T ss_dssp TCCCEEEESCEEEEE
T ss_pred CceEEEEECcEecCC
Confidence 234699999988764
No 56
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=98.15 E-value=4.6e-05 Score=73.00 Aligned_cols=180 Identities=12% Similarity=0.220 Sum_probs=100.7
Q ss_pred chHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeeeeecCCCCCCCeEEEEeEEEEccCCCCccCCCccccEEEeeeece
Q 041224 47 DDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPCKSSSINVQIQGNIVAPHSSAWDGHDKKKWLLFSNVNGL 126 (400)
Q Consensus 47 ddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l~l~~~~ks~~v~l~~~g~i~~~~~~~~~~~~~~~~i~~~~~~nv 126 (400)
-+-..||+||++ +.......+|+|++| +|.- .|.+. |. +++|..+|. +..
T Consensus 16 g~f~TIq~Ai~a-ap~~~~~~~I~I~~G-~Y~E-~V~I~---k~-~Itl~G~g~-----------------------~~t 65 (342)
T 2nsp_A 16 KTFKTIADAIAS-APAGSTPFVILIKNG-VYNE-RLTIT---RN-NLHLKGESR-----------------------NGA 65 (342)
T ss_dssp SCBSSHHHHHHT-SCSSSSCEEEEECSE-EEEC-CEEEC---ST-TEEEEESCT-----------------------TTE
T ss_pred CCcchHHHHHHh-cccCCCcEEEEEeCC-EEEE-EEEEe---cC-eEEEEecCC-----------------------CCe
Confidence 345669999954 442202248999999 9975 45554 45 788876641 111
Q ss_pred EEecC---eeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCC--------------------ceEEE-Eeec
Q 041224 127 TVNGN---GKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPG--------------------NHISV-YGCN 182 (400)
Q Consensus 127 ~I~G~---G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~--------------------~~i~~-~~~~ 182 (400)
.|.+. ++....+..+-. .+...+.+ .++++++++++|+|+.. -.+.+ ..++
T Consensus 66 iI~~~~~~~~~~~~g~~~gT----~~satv~v-~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d 140 (342)
T 2nsp_A 66 VIAAATAAGTLKSDGSKWGT----AGSSTITI-SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGD 140 (342)
T ss_dssp EEEECCCTTCBCTTSCBCHH----HHTCSEEE-CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCB
T ss_pred EEEecccccccccccCcccc----cceeEEEE-ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccC
Confidence 12111 011101100000 01123444 47899999999998751 12321 3577
Q ss_pred ceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCC--------c--e-EEEec
Q 041224 183 DVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPG--------H--G-ISIGS 251 (400)
Q Consensus 183 nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~--------~--g-i~igs 251 (400)
++.+.+|.+... .|.+.... .+..+++|+|...-|-|- +. ....+++|.+..- . | |.--+
T Consensus 141 ~~~f~~c~f~G~-----QDTLy~~~-gr~~~~~c~I~G~vDFIF-G~--a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~ 211 (342)
T 2nsp_A 141 RAYFKDVSLVGY-----QATLYVSG-GRSFFSDCRISGTVDFIF-GD--GTALFNNCDLVSRYRADVKSGNVSGYLTAPS 211 (342)
T ss_dssp SEEEEEEEEECS-----TTCEEECS-SEEEEESCEEEESEEEEE-ES--SEEEEESCEEEECCCTTSCTTSCCEEEEEEC
T ss_pred cEEEEeeEEecc-----cceEEECC-CCEEEEcCEEEeceEEEe-CC--ceEEEecCEEEEecCcccccccCceEEEccC
Confidence 888888888874 45666654 467888888887666553 32 3578888887421 0 3 22111
Q ss_pred cCCCCCCCCEEEEEEEeeEEeCC
Q 041224 252 LGANGGTSIVEDVHVRDCTFKGT 274 (400)
Q Consensus 252 ~g~~~~~~~i~ni~v~N~~~~~~ 274 (400)
. ....-..+.|.||++.+.
T Consensus 212 --~--~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 212 --T--NINQKYGLVITNSRVIRE 230 (342)
T ss_dssp --C--BTTCSCCEEEESCEEEES
T ss_pred --C--CCCCCCEEEEEcCEEecC
Confidence 1 112334478888888764
No 57
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.10 E-value=1e-05 Score=78.97 Aligned_cols=76 Identities=16% Similarity=0.217 Sum_probs=56.1
Q ss_pred CCCeeeecCcccEEEEeeEEecC------------------CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCCCCCC
Q 041224 199 NTDGIDITHSSNVQIRDCTIATG------------------DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGANGGTS 259 (400)
Q Consensus 199 n~DGi~i~~s~nV~I~n~~i~~~------------------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~ 259 (400)
..|+|.+.+++||.|++|.+..+ |..+.++.++++|+|+||.|.... ++-+|+.-......
T Consensus 182 ~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~ 261 (399)
T 2o04_A 182 QYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDD 261 (399)
T ss_dssp CCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGT
T ss_pred CCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCcccc
Confidence 56899999999999999999854 667888888999999999997543 56777641110111
Q ss_pred CEEEEEEEeeEEeCC
Q 041224 260 IVEDVHVRDCTFKGT 274 (400)
Q Consensus 260 ~i~ni~v~N~~~~~~ 274 (400)
...+|+|.++.+.+.
T Consensus 262 g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 262 GKLKITLHHNRYKNI 276 (399)
T ss_dssp TCCCEEEESCEEEEE
T ss_pred CceeEEEECcEecCC
Confidence 234799999988764
No 58
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.09 E-value=0.00053 Score=65.89 Aligned_cols=185 Identities=16% Similarity=0.165 Sum_probs=92.8
Q ss_pred chHHHHHHHHHHHhcCCCCCceEEecCCCEEEee---------------eeeecCCCCCCCeEEEEeE---EEEccCCCC
Q 041224 47 DDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLN---------------PVSFQGPCKSSSINVQIQG---NIVAPHSSA 108 (400)
Q Consensus 47 ddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~---------------~l~l~~~~ks~~v~l~~~g---~i~~~~~~~ 108 (400)
.+.++|++||.+ +. .+..|+.-.| ++.+. .|.+ .| ++||...| .|..
T Consensus 31 tt~~~L~~al~~--~~--~~p~VI~V~G-tI~~~~~~~~~s~~~~~~~~~l~v----~s-n~TI~G~G~~~~i~g----- 95 (355)
T 1pcl_A 31 KNISDFKKALNG--TD--SSAKIIKVTG-PIDISGGKAYTSFDDQKARSQISI----PS-NTTIIGVGSNGKFTN----- 95 (355)
T ss_pred CCHHHHHHHHhh--CC--CCcEEEEECC-EEecCCccccccccccccceeEEe----CC-CeEEEEecCCeEEec-----
Confidence 466779999932 22 2446778889 88774 3444 36 88887753 3331
Q ss_pred ccCCCccccEEEeeeeceEEecCeeEeCCC-ccccccC--CCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEeecceE
Q 041224 109 WDGHDKKKWLLFSNVNGLTVNGNGKIDGKG-ASWWSNK--QNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVS 185 (400)
Q Consensus 109 ~~~~~~~~~i~~~~~~nv~I~G~G~idg~g-~~~~~~~--~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~ 185 (400)
.-+.+.+++||.|++--+-++.. .+-|... .....-.|.+.+++||.|+++++.....-. .+.
T Consensus 96 -------~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d----~~~--- 161 (355)
T 1pcl_A 96 -------GSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTD----DKY--- 161 (355)
T ss_pred -------CEEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCc----ccc---
Confidence 12455567777777733222211 1111100 001122444444444444444443321000 000
Q ss_pred EeceEEECCCCCCCCCe-eeec-CcccEEEEeeEEecCCceEEEcCC---------ceeEEEEeeEEcCCc--eEEEecc
Q 041224 186 ISNLKIIAPESSPNTDG-IDIT-HSSNVQIRDCTIATGDDCVAIGTD---------TSNIAVTGVICGPGH--GISIGSL 252 (400)
Q Consensus 186 i~~~~I~~~~~~~n~DG-i~i~-~s~nV~I~n~~i~~~dD~i~i~s~---------~~ni~i~n~~~~~~~--gi~igs~ 252 (400)
.........-.|| +++. .+++|+|++|+|...+.+.-+++. ..+|++.++.|.+.. .=++.
T Consensus 162 ----~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~PrvR-- 235 (355)
T 1pcl_A 162 ----TTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVR-- 235 (355)
T ss_pred ----ccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCcccCCcee--
Confidence 0000000001355 3554 688999999999877665555542 126999999886432 11111
Q ss_pred CCCCCCCCEEEEEEEeeEEeCC
Q 041224 253 GANGGTSIVEDVHVRDCTFKGT 274 (400)
Q Consensus 253 g~~~~~~~i~ni~v~N~~~~~~ 274 (400)
.+ .+++-|+.+++.
T Consensus 236 -----~G---~~Hv~NN~~~~~ 249 (355)
T 1pcl_A 236 -----FG---SIHAYNNVYLGD 249 (355)
T ss_pred -----cc---eEEEEcceEEcc
Confidence 11 278888888654
No 59
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.09 E-value=0.00011 Score=70.80 Aligned_cols=150 Identities=15% Similarity=0.128 Sum_probs=102.6
Q ss_pred eceEEecCe---eEeCCCccccccCCCCCCceEEEe-eeCcEEEEceEEeCCC------CceEEEEeecceEEeceEEEC
Q 041224 124 NGLTVNGNG---KIDGKGASWWSNKQNQRPTALSFG-SCNNLVFRGLTHVDSP------GNHISVYGCNDVSISNLKIIA 193 (400)
Q Consensus 124 ~nv~I~G~G---~idg~g~~~~~~~~~~rp~~i~~~-~~~nv~i~~v~i~ns~------~~~i~~~~~~nv~i~~~~I~~ 193 (400)
+|.+|.|.| +|.+. .|.+. +++||.|++++|++.. ..+|.+..+++|.|++|++..
T Consensus 108 snkTI~G~g~~~~I~G~--------------gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~ 173 (359)
T 1qcx_A 108 SNKSIVGQGTKGVIKGK--------------GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTAR 173 (359)
T ss_dssp SSEEEEECTTCCEEESC--------------CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEE
T ss_pred CCceEEecCCceEEecc--------------eEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeec
Confidence 678888875 66653 37777 8999999999998742 357899999999999999986
Q ss_pred CCCCCCCCeee---ecCcccEEEEeeEEecCC-----------ceEEEcCCceeEEEEeeEEcCCce--EEEeccCCCCC
Q 041224 194 PESSPNTDGID---ITHSSNVQIRDCTIATGD-----------DCVAIGTDTSNIAVTGVICGPGHG--ISIGSLGANGG 257 (400)
Q Consensus 194 ~~~~~n~DGi~---i~~s~nV~I~n~~i~~~d-----------D~i~i~s~~~ni~i~n~~~~~~~g--i~igs~g~~~~ 257 (400)
. .|+.. ...+++|+|++|+|.... ....+...+.++++.++.+.+..+ =++.
T Consensus 174 ~-----~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r------- 241 (359)
T 1qcx_A 174 I-----GRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ------- 241 (359)
T ss_dssp E-----SSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC-------
T ss_pred c-----CcCceeecccccccEEEECcEecCCccccccCcccccceeEEecCCCCeehcccEeccCcccCceec-------
Confidence 3 34432 347899999999998431 234454446799999998864221 1111
Q ss_pred CCCEEEEEEEeeEEeCCc-ceEEEEeecCCCeeEEeEEEEeEEEecCCccEE
Q 041224 258 TSIVEDVHVRDCTFKGTK-NGARIKTWQGGSGHARRISFERIRLESSDNPII 308 (400)
Q Consensus 258 ~~~i~ni~v~N~~~~~~~-~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~i~ 308 (400)
.-..++|.|+.+.+.. +++.. .. -..|.+|+..+++...|+.
T Consensus 242 --~~~~~hv~NN~~~n~~~~a~~~--~~-----~~~i~~e~N~F~~~~~~~~ 284 (359)
T 1qcx_A 242 --GNTLLHAVNNLFHNFDGHAFEI--GT-----GGYVLAEGNVFQDVNVVVE 284 (359)
T ss_dssp --SSEEEEEESCEEEEEEEEEEEE--CT-----TEEEEEESCEEEEEEEEEC
T ss_pred --CCceEEEEccEEECccCeEEec--CC-----CceEEEEeeEEECCCcccC
Confidence 1135888999888742 33332 11 1457777777777766653
No 60
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.07 E-value=0.0011 Score=60.70 Aligned_cols=172 Identities=16% Similarity=0.213 Sum_probs=114.3
Q ss_pred CeeEEeeecCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeeeeecCCCCCCCeEEEEe--EEEEccCC-
Q 041224 30 ASSVSVIQFGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPVSFQGPCKSSSINVQIQ--GNIVAPHS- 106 (400)
Q Consensus 30 ~~~~nv~d~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l~l~~~~ks~~v~l~~~--g~i~~~~~- 106 (400)
++...+++|||.++-.+||+++|.+.|+. ...|+||.| +|...-+.+ + ...|+.. |+|..-+.
T Consensus 62 arvls~k~fga~~~~~~d~~~~~~~sl~s-------~~~v~i~~g-vf~ss~i~~-----~-~c~l~g~g~g~~~~~~~~ 127 (542)
T 2x3h_A 62 ARVLTSKPFGAAGDATTDDTEVIAASLNS-------QKAVTISDG-VFSSSGINS-----N-YCNLDGRGSGVLSHRSST 127 (542)
T ss_dssp HHBCBSSCTTCCCBSSSCCHHHHHHHHTS-------SSCEECCSE-EEEECCEEE-----S-CCEEECTTTEEEEECSSS
T ss_pred heeeecccccccCCcccCcHHHHHhhhcc-------cccEecccc-ccccccccc-----c-cccccccCCceeeeecCC
Confidence 45678899999999999999999999942 346999999 999887777 4 6777765 78865433
Q ss_pred CCccC-CCccccEEEeeeeceEEecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEe-----
Q 041224 107 SAWDG-HDKKKWLLFSNVNGLTVNGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYG----- 180 (400)
Q Consensus 107 ~~~~~-~~~~~~i~~~~~~nv~I~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~----- 180 (400)
..|.- ..+ .....++++|+|.-.-| ....+-+.|....+++++++.+.|-..-++.+..
T Consensus 128 gn~lvfn~p----~~g~ls~~ti~~nk~~d-----------s~qg~qvs~~gg~dvsv~~i~fsn~~g~gfsliayp~~~ 192 (542)
T 2x3h_A 128 GNYLVFNNP----RTGRLSNITVESNKATD-----------TTQGQQVSLAGGSDVTVSDVNFSNVKGTGFSLIAYPNDA 192 (542)
T ss_dssp SCCEEEESC----EEEEEEEEEEECCCSST-----------TCBCCSEEEESCEEEEEEEEEEEEECSBEEEEEEECSSS
T ss_pred CCEEEEeCC----CCcceeeEEEecccCCc-----------cccceEEEecCCCcceEeeeeeeecCCCceeEEEcCCCC
Confidence 22210 000 11224677777731100 1223458899999999999999887666655432
Q ss_pred -ecceEEeceEEECCCCCCCCC--eeeecCcccEEEEeeEEecC--CceEEEcCC
Q 041224 181 -CNDVSISNLKIIAPESSPNTD--GIDITHSSNVQIRDCTIATG--DDCVAIGTD 230 (400)
Q Consensus 181 -~~nv~i~~~~I~~~~~~~n~D--Gi~i~~s~nV~I~n~~i~~~--dD~i~i~s~ 230 (400)
-+...|++++=.-.+.+.|.. ..-.++|.|-+|++...++. -.++.+|..
T Consensus 193 ~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~ 247 (542)
T 2x3h_A 193 PPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGT 247 (542)
T ss_dssp CCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETT
T ss_pred CCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecc
Confidence 134566666655433333322 34457889999999988884 456777764
No 61
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.04 E-value=6.9e-05 Score=72.17 Aligned_cols=150 Identities=15% Similarity=0.198 Sum_probs=101.5
Q ss_pred eceEEecCe---eEeCCCccccccCCCCCCceEEEe-eeCcEEEEceEEeCC------CCceEEEEeecceEEeceEEEC
Q 041224 124 NGLTVNGNG---KIDGKGASWWSNKQNQRPTALSFG-SCNNLVFRGLTHVDS------PGNHISVYGCNDVSISNLKIIA 193 (400)
Q Consensus 124 ~nv~I~G~G---~idg~g~~~~~~~~~~rp~~i~~~-~~~nv~i~~v~i~ns------~~~~i~~~~~~nv~i~~~~I~~ 193 (400)
+|.+|.|.| .|.+. .|.+. +++||.|++++|++. ...+|.+..+++|.|++|++..
T Consensus 108 snkTI~G~G~~~~i~G~--------------gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~ 173 (359)
T 1idk_A 108 SNKSLIGEGSSGAIKGK--------------GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTAR 173 (359)
T ss_dssp SSEEEEECTTTCEEESC--------------CEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEE
T ss_pred CCceEEEecCCeEEecc--------------eEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeec
Confidence 788998874 56553 37787 899999999999872 3367999999999999999986
Q ss_pred CCCCCCCCeee---ecCcccEEEEeeEEecCC---------c--eEEEcCCceeEEEEeeEEcCCce--EEEeccCCCCC
Q 041224 194 PESSPNTDGID---ITHSSNVQIRDCTIATGD---------D--CVAIGTDTSNIAVTGVICGPGHG--ISIGSLGANGG 257 (400)
Q Consensus 194 ~~~~~n~DGi~---i~~s~nV~I~n~~i~~~d---------D--~i~i~s~~~ni~i~n~~~~~~~g--i~igs~g~~~~ 257 (400)
. .|++. ...+++|+|++|+|...+ + ...+...+.+|++.++.+.+..+ =++.
T Consensus 174 ~-----~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r------- 241 (359)
T 1idk_A 174 I-----GRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQ------- 241 (359)
T ss_dssp E-----SSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEEC-------
T ss_pred C-----CCCcEEecccCcceEEEECcEecCCcccccccCccccceEEEEecCCCeEEEceEeecCcccCcccc-------
Confidence 3 33332 457899999999998532 1 24454446799999999864321 1111
Q ss_pred CCCEEEEEEEeeEEeCC-cceEEEEeecCCCeeEEeEEEEeEEEecCCccEE
Q 041224 258 TSIVEDVHVRDCTFKGT-KNGARIKTWQGGSGHARRISFERIRLESSDNPII 308 (400)
Q Consensus 258 ~~~i~ni~v~N~~~~~~-~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~i~ 308 (400)
.-..+++.|+.+.+. .+++.+ ..+ ..|.+|+..+++.+.|+.
T Consensus 242 --~g~~~hv~NN~~~n~~~~~i~~--~~~-----~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 242 --DNTLLHAVNNYWYDISGHAFEI--GEG-----GYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp --TTCEEEEESCEEEEEEEEEEEE--CTT-----CEEEEESCEEEEEEEEEE
T ss_pred --CCceEEEECCEEecccceEEec--cCC-----cEEEEEccEEECCCCcee
Confidence 113588888888763 234432 111 356677777766666644
No 62
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.96 E-value=3.2e-05 Score=74.42 Aligned_cols=126 Identities=20% Similarity=0.227 Sum_probs=80.9
Q ss_pred eeceEEecCe---eEeCCCccccccCCCCCCceEEE---eeeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCCC
Q 041224 123 VNGLTVNGNG---KIDGKGASWWSNKQNQRPTALSF---GSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPES 196 (400)
Q Consensus 123 ~~nv~I~G~G---~idg~g~~~~~~~~~~rp~~i~~---~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~ 196 (400)
.+|.+|.|.| .|.+. .|.+ .+++||.|++++|++.....-..... ..+
T Consensus 86 ~snkTI~G~G~~~~i~g~--------------gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~------------~g~ 139 (361)
T 1pe9_A 86 PANTTVIGLGTDAKFING--------------SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKG------------DGW 139 (361)
T ss_dssp CSSEEEEECTTCCEEESS--------------EEEEEGGGTCEEEEEESCEEECCCCSSCEEETT------------TEE
T ss_pred cCCcEEEccCCCeEEecC--------------EEEEecCCCCceEEEeCeEEEcCcccccccccc------------cCc
Confidence 4889998864 44431 3666 56777777777777532100000000 001
Q ss_pred CCCCCeeeecC-cccEEEEeeEEecC------------------CceEEEcCCceeEEEEeeEEcCCc-eEEEeccCCCC
Q 041224 197 SPNTDGIDITH-SSNVQIRDCTIATG------------------DDCVAIGTDTSNIAVTGVICGPGH-GISIGSLGANG 256 (400)
Q Consensus 197 ~~n~DGi~i~~-s~nV~I~n~~i~~~------------------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~ 256 (400)
....|+|.+.. ++||.|++|.+..+ |..+.++.++++|+|++|.|.... ++-+|+.-...
T Consensus 140 ~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~ 219 (361)
T 1pe9_A 140 NAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNG 219 (361)
T ss_dssp ECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCH
T ss_pred ccCCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCc
Confidence 12478999998 99999999999863 677889888999999999997533 56677631100
Q ss_pred -CCCCEEEEEEEeeEEeCC
Q 041224 257 -GTSIVEDVHVRDCTFKGT 274 (400)
Q Consensus 257 -~~~~i~ni~v~N~~~~~~ 274 (400)
....--+|+|.++.+.+.
T Consensus 220 ~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 220 SQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp HHHTTCCEEEEESCEEEEE
T ss_pred ccccCcceEEEECeEEcCc
Confidence 001234799999999764
No 63
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=97.95 E-value=7.1e-05 Score=71.92 Aligned_cols=159 Identities=16% Similarity=0.186 Sum_probs=103.6
Q ss_pred EEEee-eeceEEecC-eeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCC-----CceEEEEeecceEEeceE
Q 041224 118 LLFSN-VNGLTVNGN-GKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSP-----GNHISVYGCNDVSISNLK 190 (400)
Q Consensus 118 i~~~~-~~nv~I~G~-G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~-----~~~i~~~~~~nv~i~~~~ 190 (400)
+.+.. .+|++|.|. +.+. ...|.+.+++||.|++++|+..+ ...|.+..+++|.|++|.
T Consensus 82 ~~i~~~~sn~TI~G~~~~~~--------------g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s 147 (353)
T 1air_A 82 VEIKEFTKGITIIGANGSSA--------------NFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNE 147 (353)
T ss_dssp EEEESBCSCEEEEECTTCCB--------------SSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCE
T ss_pred eEEEecCCCEEEEeccCCCC--------------CceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeE
Confidence 44432 378888884 2211 23588889999999999999754 357999999999999999
Q ss_pred EECCCCC--------CCCCee-ee-cCcccEEEEeeEEecCCceEEEcCC----ceeEEEEeeEEcCCc--eEEEeccCC
Q 041224 191 IIAPESS--------PNTDGI-DI-THSSNVQIRDCTIATGDDCVAIGTD----TSNIAVTGVICGPGH--GISIGSLGA 254 (400)
Q Consensus 191 I~~~~~~--------~n~DGi-~i-~~s~nV~I~n~~i~~~dD~i~i~s~----~~ni~i~n~~~~~~~--gi~igs~g~ 254 (400)
+....+. ...||. ++ ..+.+|+|++|.|...+-..-+++. ..+|++.++.+.+.. .-++.
T Consensus 148 ~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r---- 223 (353)
T 1air_A 148 LFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQR---- 223 (353)
T ss_dssp EECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEE----
T ss_pred EecCCcccccccccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCc----
Confidence 9864211 113664 66 4789999999999875444434332 157999999885321 11221
Q ss_pred CCCCCCEEEEEEEeeEEeCCc-ceEEEEeecCCCeeEEeEEEEeEEEecCCccE
Q 041224 255 NGGTSIVEDVHVRDCTFKGTK-NGARIKTWQGGSGHARRISFERIRLESSDNPI 307 (400)
Q Consensus 255 ~~~~~~i~ni~v~N~~~~~~~-~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~i 307 (400)
. -.+++.|+.+.+.. +++.... + ..|.+|+..++++..|+
T Consensus 224 ---~---G~~Hv~NN~~~n~~~~~~~~~~--~-----~~i~~e~N~F~~~~~p~ 264 (353)
T 1air_A 224 ---G---GLVHAYNNLYTNITGSGLNVRQ--N-----GQALIENNWFEKAINPV 264 (353)
T ss_dssp ---S---SEEEEESCEEEEESSCSEEEET--T-----CEEEEESCEEEEEESSE
T ss_pred ---C---ceEEEEccEEECCCCceeccCC--C-----cEEEEEceEEECCCCce
Confidence 1 14778888887643 4544321 2 24566666666666675
No 64
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.92 E-value=4.8e-05 Score=74.52 Aligned_cols=128 Identities=17% Similarity=0.256 Sum_probs=89.8
Q ss_pred eeceEEecCe---eEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCC-------------------CCceEEEEe
Q 041224 123 VNGLTVNGNG---KIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDS-------------------PGNHISVYG 180 (400)
Q Consensus 123 ~~nv~I~G~G---~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns-------------------~~~~i~~~~ 180 (400)
.+|.+|.|.| .|.+ ..|.+.+++||.|++++|++. ...+|.+..
T Consensus 131 ~snkTI~G~G~~~~i~g--------------~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~ 196 (416)
T 1vbl_A 131 GSNTSIIGVGKDAKIKG--------------GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEG 196 (416)
T ss_dssp CSSEEEEECTTCCEEES--------------CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEES
T ss_pred CCCeeEEecCCCeEEec--------------CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecC
Confidence 4788888864 4443 258888999999999999764 135689999
Q ss_pred ecceEEeceEEECCCCC------------CCCCe-eeec-CcccEEEEeeEEecCCceEEEcCCc--------eeEEEEe
Q 041224 181 CNDVSISNLKIIAPESS------------PNTDG-IDIT-HSSNVQIRDCTIATGDDCVAIGTDT--------SNIAVTG 238 (400)
Q Consensus 181 ~~nv~i~~~~I~~~~~~------------~n~DG-i~i~-~s~nV~I~n~~i~~~dD~i~i~s~~--------~ni~i~n 238 (400)
+++|.|++|++....+. .-.|| +++. .+.+|+|++|+|...+-+.-+++.. -+|++.+
T Consensus 197 s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hh 276 (416)
T 1vbl_A 197 SSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHH 276 (416)
T ss_dssp CEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEES
T ss_pred CceEEEEccEEecCCCcccccccccCcceeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEEC
Confidence 99999999999964210 12466 4555 6899999999999866555555421 2699999
Q ss_pred eEEcCCc--eEEEeccCCCCCCCCEEEEEEEeeEEeCC
Q 041224 239 VICGPGH--GISIGSLGANGGTSIVEDVHVRDCTFKGT 274 (400)
Q Consensus 239 ~~~~~~~--gi~igs~g~~~~~~~i~ni~v~N~~~~~~ 274 (400)
+.|.+.. .=++. .+ .+++-|+.+++.
T Consensus 277 N~f~~~~~R~Pr~R-------~G---~~Hv~NN~~~n~ 304 (416)
T 1vbl_A 277 NYYKNVTQRLPRVR-------FG---QVHIYNNYYEFS 304 (416)
T ss_dssp CEEEEEEECSSEES-------SC---EEEEESCEEEEC
T ss_pred cEecCCccCCcccc-------cc---eEEEEcceEECC
Confidence 9985422 22221 11 388999999853
No 65
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.91 E-value=7.5e-05 Score=71.86 Aligned_cols=173 Identities=16% Similarity=0.233 Sum_probs=91.3
Q ss_pred chHHHHHHHHHHHhcCCCCCceEEecCCCEEEee---------------eeeecCCCCCCCeEEEEeE---EEEccCCCC
Q 041224 47 DDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLN---------------PVSFQGPCKSSSINVQIQG---NIVAPHSSA 108 (400)
Q Consensus 47 ddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~---------------~l~l~~~~ks~~v~l~~~g---~i~~~~~~~ 108 (400)
.+.+.|++||. +.. +-.|+.=.| ++.+. .|.+ .| +.||...| .|..
T Consensus 39 tt~~dL~~al~---~~~--~p~vI~V~G-tI~~~~~~~~~s~~~~~~~~~l~v----~s-nkTI~G~G~~~~i~g----- 102 (361)
T 1pe9_A 39 TNISEFTSALS---AGA--EAKIIQIKG-TIDISGGTPYTDFADQKARSQINI----PA-NTTVIGLGTDAKFIN----- 102 (361)
T ss_dssp CSHHHHHHHHT---TTT--SCEEEEECS-EEETTTTCCCCSHHHHHHHSEEEC----CS-SEEEEECTTCCEEES-----
T ss_pred CCHHHHHHHHh---cCC--CcEEEEECC-EEecCCccccccccccccceeEEe----cC-CcEEEccCCCeEEec-----
Confidence 35566888882 222 334555688 88773 3554 47 88888762 3431
Q ss_pred ccCCCccccEEE---eeeeceEEecCeeEeCCC-ccccccCCCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEe-ecc
Q 041224 109 WDGHDKKKWLLF---SNVNGLTVNGNGKIDGKG-ASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYG-CND 183 (400)
Q Consensus 109 ~~~~~~~~~i~~---~~~~nv~I~G~G~idg~g-~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~-~~n 183 (400)
.-|.+ .+++||.|+.--+-++.. .+-|... ++ .++...+|.+.. +++
T Consensus 103 -------~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~------------------~g---~~~~~DaI~i~~~s~n 154 (361)
T 1pe9_A 103 -------GSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKG------------------DG---WNAEWDAMNITNGAHH 154 (361)
T ss_dssp -------SEEEEEGGGTCEEEEEESCEEECCCCSSCEEETT------------------TE---EECCCCSEEEETTCEE
T ss_pred -------CEEEEecCCCCceEEEeCeEEEcCcccccccccc------------------cC---cccCCceEEeecCCce
Confidence 12556 567888887743322211 1111100 00 012233444444 555
Q ss_pred eEEeceEEECCCC------------CCCCCe-eeec-CcccEEEEeeEEecCCceEEEcCC---------ceeEEEEeeE
Q 041224 184 VSISNLKIIAPES------------SPNTDG-IDIT-HSSNVQIRDCTIATGDDCVAIGTD---------TSNIAVTGVI 240 (400)
Q Consensus 184 v~i~~~~I~~~~~------------~~n~DG-i~i~-~s~nV~I~n~~i~~~dD~i~i~s~---------~~ni~i~n~~ 240 (400)
|.|++|++....+ ..-.|| +++. .+.+|+|++|+|...+-+.-+++. .-+|++.++.
T Consensus 155 VWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~ 234 (361)
T 1pe9_A 155 VWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNV 234 (361)
T ss_dssp EEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCE
T ss_pred EEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeE
Confidence 5555555553210 011455 4564 578999999999876555545442 1268888888
Q ss_pred EcCCc--eEEEeccCCCCCCCCEEEEEEEeeEEeC
Q 041224 241 CGPGH--GISIGSLGANGGTSIVEDVHVRDCTFKG 273 (400)
Q Consensus 241 ~~~~~--gi~igs~g~~~~~~~i~ni~v~N~~~~~ 273 (400)
|.+.. .=++. .+ .+++-|+.+.+
T Consensus 235 f~~~~~R~Pr~R-------~G---~~Hv~NN~~~~ 259 (361)
T 1pe9_A 235 FNRVTERAPRVR-------YG---SIHSFNNVFKG 259 (361)
T ss_dssp EEEEEECSSEES-------SC---EEEEESCEEEE
T ss_pred EcCccccCcccc-------cc---eEEEEcceEec
Confidence 85321 11121 11 27888888864
No 66
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.86 E-value=0.00022 Score=68.82 Aligned_cols=127 Identities=17% Similarity=0.203 Sum_probs=95.8
Q ss_pred CcEEEEceEEeCC-----C------CceEEEEe-ecceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEecCCceEE
Q 041224 159 NNLVFRGLTHVDS-----P------GNHISVYG-CNDVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATGDDCVA 226 (400)
Q Consensus 159 ~nv~i~~v~i~ns-----~------~~~i~~~~-~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~ 226 (400)
++|+|++++|.++ . .-+|.+.. .+++.|+++.|... .-||.+..+++++|++++|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~-----~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYL-----EHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEESC-----SEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEecc-----cEEEEEccCCCcEEECCEEEecCCcee
Confidence 6777777777766 3 23577775 78899999999984 569999999999999999998888999
Q ss_pred EcCCceeEEEEeeEEcCC---ceEEEeccCCCCCCCCEEEEEEEeeEE-eCCcceEEEEeecCCCeeEEeEEEEeEEEec
Q 041224 227 IGTDTSNIAVTGVICGPG---HGISIGSLGANGGTSIVEDVHVRDCTF-KGTKNGARIKTWQGGSGHARRISFERIRLES 302 (400)
Q Consensus 227 i~s~~~ni~i~n~~~~~~---~gi~igs~g~~~~~~~i~ni~v~N~~~-~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~ 302 (400)
+...++...|+++.+..+ +||.+. ...+.+|+++.+ .+..+|+.+..- .+..|++.++++
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl~---------ns~~~~I~~N~i~~~~R~gIh~m~s-------~~~~i~~N~f~~ 274 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLAE---------NHEGLLVTGNNLFPRGRSLIEFTGC-------NRCSVTSNRLQG 274 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEEE---------SEESCEEESCEECSCSSEEEEEESC-------BSCEEESCEEEE
T ss_pred eccccccceEecceeeecCCCCEEEEE---------eCCCCEEECCCcccCcceEEEEEcc-------CCCEEECCEEec
Confidence 998788999999998754 346663 457788999977 558889988542 233455555554
Q ss_pred CCcc
Q 041224 303 SDNP 306 (400)
Q Consensus 303 ~~~~ 306 (400)
...+
T Consensus 275 ~~~G 278 (410)
T 2inu_A 275 FYPG 278 (410)
T ss_dssp SSSC
T ss_pred ceeE
Confidence 4444
No 67
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.78 E-value=0.0001 Score=71.94 Aligned_cols=127 Identities=17% Similarity=0.265 Sum_probs=89.0
Q ss_pred eeceEEecCe---eEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCC-------------------CCceEEEEe
Q 041224 123 VNGLTVNGNG---KIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDS-------------------PGNHISVYG 180 (400)
Q Consensus 123 ~~nv~I~G~G---~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns-------------------~~~~i~~~~ 180 (400)
.+|.+|.|.| .|.+. .|.+.. +||.|++++|++. ...+|.+..
T Consensus 126 ~snkTI~G~G~~~~i~g~--------------gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~ 190 (399)
T 2o04_A 126 PANTTIVGSGTNAKVVGG--------------NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITING 190 (399)
T ss_dssp CSSEEEEESSSCCEEESC--------------EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEES
T ss_pred CCCceEEeccCCeEEeeC--------------EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecC
Confidence 4788888874 44432 478888 9999999999763 235689999
Q ss_pred ecceEEeceEEECCCCC------------CCCCee-eec-CcccEEEEeeEEecCCceEEEcCC--------ceeEEEEe
Q 041224 181 CNDVSISNLKIIAPESS------------PNTDGI-DIT-HSSNVQIRDCTIATGDDCVAIGTD--------TSNIAVTG 238 (400)
Q Consensus 181 ~~nv~i~~~~I~~~~~~------------~n~DGi-~i~-~s~nV~I~n~~i~~~dD~i~i~s~--------~~ni~i~n 238 (400)
++||.|++|++....+. .-.||. ++. .+.+|+|++|+|...+-+.-+++. ..+|++.+
T Consensus 191 s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~ 270 (399)
T 2o04_A 191 GTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHH 270 (399)
T ss_dssp CEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEES
T ss_pred CCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEEC
Confidence 99999999999964210 114664 654 689999999999976655555542 13899999
Q ss_pred eEEcCCc--eEEEeccCCCCCCCCEEEEEEEeeEEeCC
Q 041224 239 VICGPGH--GISIGSLGANGGTSIVEDVHVRDCTFKGT 274 (400)
Q Consensus 239 ~~~~~~~--gi~igs~g~~~~~~~i~ni~v~N~~~~~~ 274 (400)
+.+.+.. .=++. .+ .+++-|+.+.+.
T Consensus 271 N~f~~~~~R~Pr~R-------~G---~~Hv~NN~~~n~ 298 (399)
T 2o04_A 271 NRYKNIVQAAPRVR-------FG---QVHVYNNYYEGS 298 (399)
T ss_dssp CEEEEEEECTTEES-------SC---EEEEESCEEECC
T ss_pred cEecCCcccCCCcc-------cc---eEEEEcceEECC
Confidence 9985322 12221 11 388999999765
No 68
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.60 E-value=0.0003 Score=68.88 Aligned_cols=109 Identities=11% Similarity=0.109 Sum_probs=83.1
Q ss_pred eEEEeeeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCCCCCCCCeeeecCc-ccEEEEeeEEecC---------
Q 041224 152 ALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSPNTDGIDITHS-SNVQIRDCTIATG--------- 221 (400)
Q Consensus 152 ~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s-~nV~I~n~~i~~~--------- 221 (400)
.+.+ ..++++|++++|.++...+|.+.. .+.+|++|+|.... ..||.+... .+.+|++|.++..
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n~----~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHNR----NTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESCS----SCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECCC----ceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 4666 788999999999998877888876 78899999999742 348998764 4889999999764
Q ss_pred CceEEEcCC-ceeEEEEeeEEcCC--ceEEEeccCCCCCCCCEEEEEEEeeEEeCC
Q 041224 222 DDCVAIGTD-TSNIAVTGVICGPG--HGISIGSLGANGGTSIVEDVHVRDCTFKGT 274 (400)
Q Consensus 222 dD~i~i~s~-~~ni~i~n~~~~~~--~gi~igs~g~~~~~~~i~ni~v~N~~~~~~ 274 (400)
.|++.++.. .+..+|++|+++.. +|+.+.. ....++|+||...+.
T Consensus 183 ~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~--------~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 183 ADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFD--------SPQKVVIENSWAFRN 230 (400)
T ss_dssp CCSEEECTTCCSCCEEESCEEESCSSCSEECTT--------CCSCCEEESCEEEST
T ss_pred cceEEEEecccCCeEEECCEEeecCCCcEEEEe--------cCCCEEEEeEEEECC
Confidence 268888742 47788999998743 5777631 223479999998765
No 69
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.51 E-value=0.0044 Score=58.67 Aligned_cols=114 Identities=18% Similarity=0.196 Sum_probs=62.9
Q ss_pred CceEEEEe-ecceEEeceEEECCC----CCCCCCe-eeec-CcccEEEEeeEEecCCceEEEcCC------ceeEEEEee
Q 041224 173 GNHISVYG-CNDVSISNLKIIAPE----SSPNTDG-IDIT-HSSNVQIRDCTIATGDDCVAIGTD------TSNIAVTGV 239 (400)
Q Consensus 173 ~~~i~~~~-~~nv~i~~~~I~~~~----~~~n~DG-i~i~-~s~nV~I~n~~i~~~dD~i~i~s~------~~ni~i~n~ 239 (400)
..+|.+.. +++|.|++|++.... +..-.|| +++. ++.+|+|++|+|...+-+.-+++. ..+|++.++
T Consensus 120 ~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~~~~~vT~~~N 199 (326)
T 3vmv_A 120 GTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDNASLAPDKITYHHN 199 (326)
T ss_dssp SCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSCGGGCCEEEEEESC
T ss_pred CCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCCCCCcccCccEEEEee
Confidence 34444443 455555555554211 1112355 3653 588999999999876655555542 147999999
Q ss_pred EEcCCc--eEEEeccCCCCCCCCEEEEEEEeeEEeCC-cceEEEEeecCCCeeEEeEEEEeEEEecC
Q 041224 240 ICGPGH--GISIGSLGANGGTSIVEDVHVRDCTFKGT-KNGARIKTWQGGSGHARRISFERIRLESS 303 (400)
Q Consensus 240 ~~~~~~--gi~igs~g~~~~~~~i~ni~v~N~~~~~~-~~gi~i~~~~~~~g~i~nI~f~ni~~~~~ 303 (400)
.+.+.. .=++. . -.+++-|+.+.+. .+++... .+ ..|.+|+..+++.
T Consensus 200 ~f~~~~~R~Pr~r-------~---G~~Hv~NN~~~n~~~~~~~~~--~~-----a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 200 YFNNLNSRVPLIR-------Y---ADVHMFNNYFKDINDTAINSR--VG-----ARVFVENNYFDNV 249 (326)
T ss_dssp EEEEEEECTTEEE-------S---CEEEEESCEEEEESSCSEEEE--TT-----CEEEEESCEEEEE
T ss_pred EecCCcCcCCccc-------C---CcEEEEccEEECCCceEEeec--CC-----cEEEEEceEEECC
Confidence 885321 11221 1 1478888888874 3555432 23 2445555555544
No 70
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=97.34 E-value=0.0043 Score=60.31 Aligned_cols=138 Identities=12% Similarity=0.146 Sum_probs=79.8
Q ss_pred EeeeCcEEEEceEEeCCCCc----------eEEEEeecceEEeceEEECCCCCCCCCeeee-----------cCcccEEE
Q 041224 155 FGSCNNLVFRGLTHVDSPGN----------HISVYGCNDVSISNLKIIAPESSPNTDGIDI-----------THSSNVQI 213 (400)
Q Consensus 155 ~~~~~nv~i~~v~i~ns~~~----------~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i-----------~~s~nV~I 213 (400)
....+++..++++|+|.... .+.+ ..+...+.+|.+....| -+-. +...+-.+
T Consensus 197 ~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v-~gDr~~fy~C~f~G~QD-----TLy~~~~~~~~~~~~d~~gRqyy 270 (422)
T 3grh_A 197 WSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRT-DGDQVQINNVNILGRQN-----TFFVTNSGVQNRLETNRQPRTLV 270 (422)
T ss_dssp EECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEE-CCSSEEEEEEEEECSTT-----CEEECCCCTTCSCCSSCCCEEEE
T ss_pred EEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEe-cCCcEEEEeeEEEeecc-----eeeeccccccccccccccccEEE
Confidence 34578999999999886431 2333 45778888888887543 2322 23456778
Q ss_pred EeeEEecCCceEEEcCCceeEEEEeeEEcCC------ce-EEEeccCCCCCCCCEEEEEEEeeEEeCCc-ceEEEE-eec
Q 041224 214 RDCTIATGDDCVAIGTDTSNIAVTGVICGPG------HG-ISIGSLGANGGTSIVEDVHVRDCTFKGTK-NGARIK-TWQ 284 (400)
Q Consensus 214 ~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~------~g-i~igs~g~~~~~~~i~ni~v~N~~~~~~~-~gi~i~-~~~ 284 (400)
++|+|...-|-|.= .....+++|.+..- .| |.-.+. ....-..+.|.||++.... ...++. .|.
T Consensus 271 ~~CyIeGtVDFIFG---~a~AvFe~C~I~s~~~~~~~~g~ITA~~t----~~~~~~Gfvf~nC~ita~~~~~~yLGRPW~ 343 (422)
T 3grh_A 271 TNSYIEGDVDIVSG---RGAVVFDNTEFRVVNSRTQQEAYVFAPAT----LSNIYYGFLAVNSRFNAFGDGVAQLGRSLD 343 (422)
T ss_dssp ESCEEEESEEEEEE---SSEEEEESCEEEECCSSCSSCCEEEEECC----BTTCCCCEEEESCEEEECSSSCBEEEEEEC
T ss_pred EecEEeccccEEcc---CceEEEEeeEEEEecCCCCCceEEEecCC----CCCCCCEEEEECCEEEeCCCCCEEcCCCCC
Confidence 88888876665532 23678888877521 22 222221 1233356788888887432 123333 232
Q ss_pred CCCeeEEeEEEEeEEEecCCc
Q 041224 285 GGSGHARRISFERIRLESSDN 305 (400)
Q Consensus 285 ~~~g~i~nI~f~ni~~~~~~~ 305 (400)
...-..-.|.|.+..|.+.-.
T Consensus 344 ~ysrt~~qVVf~~s~l~~~I~ 364 (422)
T 3grh_A 344 VDANTNGQVVIRDSAINEGFN 364 (422)
T ss_dssp CSTTBCCEEEEESCEECTTBC
T ss_pred CcCCcCccEEEEeCcccCccC
Confidence 222123457888888876543
No 71
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=96.76 E-value=0.0032 Score=61.08 Aligned_cols=95 Identities=21% Similarity=0.284 Sum_probs=63.7
Q ss_pred eeceEEecCee-EeCCCccccccCCCCCCceEEEeeeCcEEEE-ceEEeCCCCceEEEEeecceEEeceEEECCCCCC-C
Q 041224 123 VNGLTVNGNGK-IDGKGASWWSNKQNQRPTALSFGSCNNLVFR-GLTHVDSPGNHISVYGCNDVSISNLKIIAPESSP-N 199 (400)
Q Consensus 123 ~~nv~I~G~G~-idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~-~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~~~-n 199 (400)
.++|.+++-.+ +.. +..|. +++..|++++++ ++.+.+ +|+||.|.||+|...++.- -
T Consensus 178 fdnV~Vn~Vt~~v~~--Sg~WT---------IhPi~Cqnvt~r~gL~f~e---------SCrNV~IsnC~FsVGDdciai 237 (514)
T 2vbk_A 178 FDNVMVNEVETAYLM--QGLWH---------SKFIACQAGTCRVGLHFLG---------QCVSVSVSSCHFSRGNYSADE 237 (514)
T ss_dssp EESCEEEEEEEEEEE--ESEEE---------EEEESCEEEEEEEEEEEES---------CCEEEEEESCEEECTTSCCTT
T ss_pred eeeEEEEeEEEeEec--cCcEE---------EeEeccCceecccCccccC---------CCCeEEEeccEEecCcceeee
Confidence 46788877432 111 23464 899999999988 666643 7999999999999865410 1
Q ss_pred CCeeee------cCcccEEEEeeEEecCCceEEEcCC-----cee-EEEEeeEEcCCce
Q 041224 200 TDGIDI------THSSNVQIRDCTIATGDDCVAIGTD-----TSN-IAVTGVICGPGHG 246 (400)
Q Consensus 200 ~DGi~i------~~s~nV~I~n~~i~~~dD~i~i~s~-----~~n-i~i~n~~~~~~~g 246 (400)
.-|.-. ..|+++. +.+|.++|. .+| |+|++|.|.+.+-
T Consensus 238 ksGk~~~~~~~~~~se~~~---------hgav~igSE~m~~Gvk~~v~v~~Clf~~td~ 287 (514)
T 2vbk_A 238 SFGIRIQPQTYAWSSEAVR---------SEAIILDSETMCIGFKNAVYVHDCLDLHMEQ 287 (514)
T ss_dssp CEEEEEECBCCTTTSSCBC---------CEEEEEESSEEEESCSEEEEESCCEEEEEES
T ss_pred ecCceecccccCCcchhcc---------cccEEECchhhcccccccEEEEeeeccCCcc
Confidence 112111 3467766 567777773 688 9999999876543
No 72
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=95.67 E-value=0.28 Score=46.13 Aligned_cols=112 Identities=9% Similarity=0.156 Sum_probs=77.9
Q ss_pred eecceEEeceEEECCCCC--CCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCCceEEEeccCCCCC
Q 041224 180 GCNDVSISNLKIIAPESS--PNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLGANGG 257 (400)
Q Consensus 180 ~~~nv~i~~~~I~~~~~~--~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~ 257 (400)
..++++++|++|.+.... ...-++.+. ++++.+.||.|....|.+.... .+ ..+++|++.+.-.+-+|..
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~~----- 163 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRVG-SDLSAFYRCDILAYQDSLYVHS-NR-QFFINCFIAGTVDFIFGNA----- 163 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEEC-CTTEEEEEEEEECSTTCEEECS-SE-EEEESCEEEESSSCEEESC-----
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEec-CCcEEEEEeEECccceeeeecC-cc-EEEEecEEEeeeeEEecCC-----
Confidence 478999999999985321 123466664 6899999999999989988876 34 4999999987666666641
Q ss_pred CCCEEEEEEEeeEEeCCcc----eEEEEeecC-CCeeEEeEEEEeEEEecCC
Q 041224 258 TSIVEDVHVRDCTFKGTKN----GARIKTWQG-GSGHARRISFERIRLESSD 304 (400)
Q Consensus 258 ~~~i~ni~v~N~~~~~~~~----gi~i~~~~~-~~g~i~nI~f~ni~~~~~~ 304 (400)
...|+||++..... .-.|..... ....-....|.|+++....
T Consensus 164 -----~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 164 -----AVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp -----EEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECT
T ss_pred -----cEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCC
Confidence 28899999975321 123433321 1233456789999998643
No 73
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.62 E-value=0.63 Score=39.84 Aligned_cols=106 Identities=17% Similarity=0.270 Sum_probs=60.1
Q ss_pred cceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEec-CCceEEEcCCceeEEEEeeEEcCCce--EEEeccCCCCCC
Q 041224 182 NDVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIAT-GDDCVAIGTDTSNIAVTGVICGPGHG--ISIGSLGANGGT 258 (400)
Q Consensus 182 ~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~-~dD~i~i~s~~~ni~i~n~~~~~~~g--i~igs~g~~~~~ 258 (400)
...+++|+.|-.+ ..||||..+ +.+++|+++.. +.|++.+++ ...++|.+.-..++.. +..-.
T Consensus 52 ~GaTLkNvIIG~~----~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA~~A~DKV~Q~Ng------- 117 (196)
T 3t9g_A 52 KGANLKNVIIGAP----GCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGGSAKEAADKVFQLNA------- 117 (196)
T ss_dssp TTCEEEEEEECSC----CTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESCEEEEEEEEEEEECS-------
T ss_pred CCCEEEEEEECCC----CcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECCCccCCCceEEEECC-------
Confidence 3566677776542 468888764 67888888865 688888885 4566666655544332 33311
Q ss_pred CCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCCcc
Q 041224 259 SIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSDNP 306 (400)
Q Consensus 259 ~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~ 306 (400)
--.+.|+|.+..+ .|-...+- |.-..=++|.++|+++.+.+..
T Consensus 118 --~Gtv~I~nF~~~~--~GKl~RSC-Gnc~~~r~v~i~~v~~~n~k~~ 160 (196)
T 3t9g_A 118 --PCTFKVKNFTATN--IGKLVRQN-GNTTFKVVIYLEDVTLNNVKSC 160 (196)
T ss_dssp --SEEEEEEEEEEEE--EEEEEEEC-TTCCSCEEEEEEEEEEEEEEEE
T ss_pred --CceEEEeeEEEcc--CCEEEEcC-CCCCceeEEEEeCeEEeCCEEE
Confidence 1235556655553 23222222 1112336777777777765543
No 74
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.56 E-value=0.26 Score=46.36 Aligned_cols=115 Identities=10% Similarity=0.124 Sum_probs=79.3
Q ss_pred EEEEeecceEEeceEEECCCCC--CCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEcCCceEEEeccC
Q 041224 176 ISVYGCNDVSISNLKIIAPESS--PNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICGPGHGISIGSLG 253 (400)
Q Consensus 176 i~~~~~~nv~i~~~~I~~~~~~--~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g 253 (400)
+.+ .+++++++|++|.+.... ...-++.+. ++++.++||.|....|.+...+ .++ .+++|++.+.-.+-+|..
T Consensus 85 v~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~-~r~-~~~~c~I~G~vDFIfG~~- 159 (317)
T 1xg2_A 85 LAA-VGQGFILQDICIQNTAGPAKDQAVALRVG-ADMSVINRCRIDAYQDTLYAHS-QRQ-FYRDSYVTGTVDFIFGNA- 159 (317)
T ss_dssp EEE-CSTTCEEESCEEEECCCGGGCCCCSEEEC-CTTEEEESCEEECSTTCEEECS-SEE-EEESCEEEESSSCEEECC-
T ss_pred EEE-ECCCEEEEEeEEecccCCccCceEEEEEe-CCcEEEEEeEeCccccceeecC-ccE-EEEeeEEEeceeEEcCCc-
Confidence 444 578999999999985321 123466664 6899999999999989988876 343 999999987667766642
Q ss_pred CCCCCCCEEEEEEEeeEEeCCcc----eEEEEeecC-CCeeEEeEEEEeEEEecCC
Q 041224 254 ANGGTSIVEDVHVRDCTFKGTKN----GARIKTWQG-GSGHARRISFERIRLESSD 304 (400)
Q Consensus 254 ~~~~~~~i~ni~v~N~~~~~~~~----gi~i~~~~~-~~g~i~nI~f~ni~~~~~~ 304 (400)
...|+||++..... .-.|..... ....-....|.|+++....
T Consensus 160 ---------~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 206 (317)
T 1xg2_A 160 ---------AVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASS 206 (317)
T ss_dssp ---------EEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECT
T ss_pred ---------eEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCC
Confidence 28899999975321 123433321 1233456789999998643
No 75
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=95.43 E-value=0.16 Score=51.00 Aligned_cols=147 Identities=4% Similarity=0.008 Sum_probs=98.4
Q ss_pred ceEEEe----eeCcEEEEceEEeCC-CCceEEEEeecceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEecCC---
Q 041224 151 TALSFG----SCNNLVFRGLTHVDS-PGNHISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATGD--- 222 (400)
Q Consensus 151 ~~i~~~----~~~nv~i~~v~i~ns-~~~~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~d--- 222 (400)
..+++. ...+.+|++=.+.+. ....+....+.+.+|++.++... ..|+.+..+++.+|++..+....
T Consensus 216 e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~ 290 (506)
T 1dbg_A 216 GGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRF 290 (506)
T ss_dssp CSEEECSSTTCBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSS
T ss_pred ccEEEEEEecccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCcc
Confidence 445554 356888887777543 44566666777789999999873 34788887788889888887643
Q ss_pred --ceEEEcCCceeEEEEeeEEcCCc--------eEEEeccCCCCCCCCEEEEEEEeeEEeCCcc-eEEEE----------
Q 041224 223 --DCVAIGTDTSNIAVTGVICGPGH--------GISIGSLGANGGTSIVEDVHVRDCTFKGTKN-GARIK---------- 281 (400)
Q Consensus 223 --D~i~i~s~~~ni~i~n~~~~~~~--------gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~-gi~i~---------- 281 (400)
.||.+.. . +.+|+|++|.+.. |+.+...........+++++|++++|.+... ||.+.
T Consensus 291 ~~~Gi~i~~-~-~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~ 368 (506)
T 1dbg_A 291 GYGGMFVWG-S-RHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYC 368 (506)
T ss_dssp CBCCEEECS-B-SCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHH
T ss_pred CceEEEEEC-C-CCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEEccccccccccc
Confidence 6788865 3 4499999887532 6666321100113457899999999999987 99887
Q ss_pred eec-CCCeeEEeEEEEeEEEecCC
Q 041224 282 TWQ-GGSGHARRISFERIRLESSD 304 (400)
Q Consensus 282 ~~~-~~~g~i~nI~f~ni~~~~~~ 304 (400)
.-. .....=.|++|.|.-+.+.+
T Consensus 369 ~g~~~~~~~p~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 369 AANRLKFETPHQLMLKGNLFFKDK 392 (506)
T ss_dssp HHTTCCCBCCCSEEEESCEEECCS
T ss_pred ccccccccCCCcEEEEccEEEcCC
Confidence 100 01133467888887777654
No 76
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.41 E-value=0.77 Score=39.31 Aligned_cols=131 Identities=12% Similarity=0.143 Sum_probs=80.3
Q ss_pred cEEEEceEEeCCCCceEEEEeecceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEecCCceEEEcCCceeEEEEee
Q 041224 160 NLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGV 239 (400)
Q Consensus 160 nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~ 239 (400)
.-+++++.|-.+...+||.. -+.+++|+....- ..|.+.+.++..++|.+.-.++.+|=|--..+...+.|+|.
T Consensus 53 GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwedV----cEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~nF 126 (196)
T 3t9g_A 53 GANLKNVIIGAPGCDGIHCY--GDNVVENVVWEDV----GEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVKNF 126 (196)
T ss_dssp TCEEEEEEECSCCTTCEEEC--SSEEEEEEEESSC----CSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEECCCCcCcEEEc--CCEeEEEEEeeee----eceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEEeeE
Confidence 45666666655555666654 2556666666552 34667776666778888888776665544444667888887
Q ss_pred EEcCCceEEEeccCCCCCCCCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCCc
Q 041224 240 ICGPGHGISIGSLGANGGTSIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSDN 305 (400)
Q Consensus 240 ~~~~~~gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~ 305 (400)
+.. ..|--..|.|. ...-++|.++|+++.+....+ +++... -..+++.|+++.++.+
T Consensus 127 ~~~-~~GKl~RSCGn---c~~~r~v~i~~v~~~n~k~~l-~rtdS~----~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 127 TAT-NIGKLVRQNGN---TTFKVVIYLEDVTLNNVKSCV-AKSDSP----VSELWYHNLNVNNCKT 183 (196)
T ss_dssp EEE-EEEEEEEECTT---CCSCEEEEEEEEEEEEEEEEE-EECCCT----TCEEEEEEEEEEEEEE
T ss_pred EEc-cCCEEEEcCCC---CCceeEEEEeCeEEeCCEEEE-EEcCCC----CCEEEEecceecCCCc
Confidence 764 24544555542 234589999999998865444 333221 2455666666666543
No 77
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=94.26 E-value=0.34 Score=46.01 Aligned_cols=111 Identities=7% Similarity=0.060 Sum_probs=76.1
Q ss_pred eecceEEeceEEECCCC--------------C--CCCCee--eecCcccEEEEeeEEecCCceEEEcCCceeEEEEeeEE
Q 041224 180 GCNDVSISNLKIIAPES--------------S--PNTDGI--DITHSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVIC 241 (400)
Q Consensus 180 ~~~nv~i~~~~I~~~~~--------------~--~n~DGi--~i~~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~ 241 (400)
.+++++++|++|.+... . ...-++ .+ .+.++.+.||.|....|.+-... ....++||++
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v-~~d~~~f~~c~f~G~QDTLy~~~--gr~~~~~c~I 170 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTK-SGDRAYFKDVSLVGYQATLYVSG--GRSFFSDCRI 170 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECT-TCBSEEEEEEEEECSTTCEEECS--SEEEEESCEE
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEee-ccCcEEEEeeEEecccceEEECC--CCEEEEcCEE
Confidence 47899999999998641 0 112245 33 46899999999999988888875 4789999999
Q ss_pred cCCceEEEeccCCCCCCCCEEEEEEEeeEEeCCcc---e-----EEEEeecCCCeeEEeEEEEeEEEecC
Q 041224 242 GPGHGISIGSLGANGGTSIVEDVHVRDCTFKGTKN---G-----ARIKTWQGGSGHARRISFERIRLESS 303 (400)
Q Consensus 242 ~~~~gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~---g-----i~i~~~~~~~g~i~nI~f~ni~~~~~ 303 (400)
.+.-.+-+|.. ...|+||++.-... + -.|.........-....|.|+++...
T Consensus 171 ~G~vDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 171 SGTVDFIFGDG----------TALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp EESEEEEEESS----------EEEEESCEEEECCCTTSCTTSCCEEEEEECCBTTCSCCEEEESCEEEES
T ss_pred EeceEEEeCCc----------eEEEecCEEEEecCcccccccCceEEEccCCCCCCCCEEEEEcCEEecC
Confidence 97777777752 38899999975321 1 23443211112223478999999865
No 78
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=93.96 E-value=1.4 Score=37.89 Aligned_cols=15 Identities=20% Similarity=0.479 Sum_probs=8.4
Q ss_pred EEEEEEeeEEeCCcc
Q 041224 262 EDVHVRDCTFKGTKN 276 (400)
Q Consensus 262 ~ni~v~N~~~~~~~~ 276 (400)
++|.++|+++.+...
T Consensus 141 r~v~i~~v~~~~~k~ 155 (197)
T 1ee6_A 141 VVMNVENCNISRVKD 155 (197)
T ss_dssp EEEEEESCEEEEEEE
T ss_pred eEEEEeceEEECceE
Confidence 566666666655433
No 79
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=93.61 E-value=0.63 Score=44.52 Aligned_cols=113 Identities=12% Similarity=0.073 Sum_probs=78.6
Q ss_pred eecceEEeceEEECCCC----------------CCCCCeeeec-CcccEEEEeeEEecCCceEEEcCCceeEEEEeeEEc
Q 041224 180 GCNDVSISNLKIIAPES----------------SPNTDGIDIT-HSSNVQIRDCTIATGDDCVAIGTDTSNIAVTGVICG 242 (400)
Q Consensus 180 ~~~nv~i~~~~I~~~~~----------------~~n~DGi~i~-~s~nV~I~n~~i~~~dD~i~i~s~~~ni~i~n~~~~ 242 (400)
..+++.++|++|.|... ..-.=++.+. .+.+..+.||.|....|.+.... .....+++|++.
T Consensus 120 ~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I~ 198 (364)
T 3uw0_A 120 NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEIS 198 (364)
T ss_dssp CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEEE
T ss_pred ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEEE
Confidence 56899999999998632 0112245554 46899999999999989888873 358899999999
Q ss_pred CCceEEEeccCCCCCCCCEEEEEEEeeEEeCCc------ceEEEEeecCCCeeEEeEEEEeEEEecC
Q 041224 243 PGHGISIGSLGANGGTSIVEDVHVRDCTFKGTK------NGARIKTWQGGSGHARRISFERIRLESS 303 (400)
Q Consensus 243 ~~~gi~igs~g~~~~~~~i~ni~v~N~~~~~~~------~gi~i~~~~~~~g~i~nI~f~ni~~~~~ 303 (400)
+.-.+-+|.. ...|+||++.-.. .+-.|.........-....|.|+++...
T Consensus 199 GtvDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 199 GHVDFIFGSG----------ITVFDNCNIVARDRSDIEPPYGYITAPSTLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp ESEEEEEESS----------EEEEESCEEEECCCSSCSSCCEEEEEECCCTTCSCCEEEESCEEEEC
T ss_pred cCCCEECCcc----------eEEEEeeEEEEeccCcccCCccEEEeCCcCCCCCcEEEEEeeEEecC
Confidence 8878888752 3789999997431 1234444322112224478999999864
No 80
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=92.71 E-value=4.3 Score=37.80 Aligned_cols=16 Identities=25% Similarity=0.408 Sum_probs=10.0
Q ss_pred ceEEecCeeEeCCCccc
Q 041224 125 GLTVNGNGKIDGKGASW 141 (400)
Q Consensus 125 nv~I~G~G~idg~g~~~ 141 (400)
.-+|.| +++|+.+..|
T Consensus 124 ~~~i~g-~t~Dgg~k~~ 139 (344)
T 3b4n_A 124 GATFEN-RTVDCGGVTI 139 (344)
T ss_dssp TEEEES-SEEECTTCEE
T ss_pred ceeEec-ceEcCCCcEE
Confidence 345665 5778876654
No 81
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=91.76 E-value=2 Score=36.93 Aligned_cols=109 Identities=16% Similarity=0.293 Sum_probs=65.0
Q ss_pred cceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEec-CCceEEEcCCceeEEEEeeEEcCCce--EEEeccCCCCCC
Q 041224 182 NDVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIAT-GDDCVAIGTDTSNIAVTGVICGPGHG--ISIGSLGANGGT 258 (400)
Q Consensus 182 ~nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~-~dD~i~i~s~~~ni~i~n~~~~~~~g--i~igs~g~~~~~ 258 (400)
+..+++|+.|-.+ ..||||-.+ +.+|+|+++.. +.|++.+++ ...++|.+.-..++.. +..-.
T Consensus 48 ~GaTLkNvIIG~~----~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~GGgA~~A~DKV~Q~Ng------- 113 (197)
T 1ee6_A 48 AGASLKNVVIGAP----AADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISGGAAYKAYDKVFQINA------- 113 (197)
T ss_dssp TTEEEEEEEECSS----CTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEESCEEEEEEEEEEEECS-------
T ss_pred CCCEEEEEEEcCC----CcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEECCCccCCCccEEEecC-------
Confidence 3566777777543 478898865 58899988875 788999986 4556666555444333 33311
Q ss_pred CCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCCccEEE
Q 041224 259 SIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSDNPIII 309 (400)
Q Consensus 259 ~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~~~i~i 309 (400)
--.+.|+|.+..+ .|-...+-... ..-++|.++|+++.+....+..
T Consensus 114 --~Gtv~I~nF~~~~--~GKl~RScGnc-~~~r~v~i~~v~~~~~k~~i~~ 159 (197)
T 1ee6_A 114 --AGTINIRNFRADD--IGKLVRQNGGT-TYKVVMNVENCNISRVKDAILR 159 (197)
T ss_dssp --SEEEEEESCEEEE--EEEEEEECTTC-CSCEEEEEESCEEEEEEEEEEE
T ss_pred --CceEEEeeEEEcc--CCEEEEcCCCC-ccceEEEEeceEEECceEEEEE
Confidence 1346677766643 34333332111 2237788888888776554443
No 82
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=91.66 E-value=8.8 Score=35.98 Aligned_cols=82 Identities=26% Similarity=0.413 Sum_probs=58.5
Q ss_pred cccEEEEeeEEec-CCceEEEcCC-----------------------ceeEEEEeeEEcCCceEEEeccCCCCCCCCEEE
Q 041224 208 SSNVQIRDCTIAT-GDDCVAIGTD-----------------------TSNIAVTGVICGPGHGISIGSLGANGGTSIVED 263 (400)
Q Consensus 208 s~nV~I~n~~i~~-~dD~i~i~s~-----------------------~~ni~i~n~~~~~~~gi~igs~g~~~~~~~i~n 263 (400)
+=|..++++.... -.|++.+++. -.|-+|.|..+.++-|+.+|-.| ..++++|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG---~G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDG---SGGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE---ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 4567888877554 5788888762 25788999988888777777655 3678899
Q ss_pred EEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCC
Q 041224 264 VHVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSD 304 (400)
Q Consensus 264 i~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~ 304 (400)
|++++| ...|..+.++ +-+|+||++-++.
T Consensus 349 itv~DC----AGsG~~~~t~--------~~~FtNi~vID~N 377 (559)
T 2v5i_A 349 VTVQDC----AGAGMLAHTY--------NRVFSNITVIDCN 377 (559)
T ss_dssp EEEESC----SSEEEEEEEE--------SCEEEEEEEESCC
T ss_pred eEehhc----cCcceEEeec--------cceeeeeEEEecc
Confidence 988888 3346555554 3478888887764
No 83
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=91.46 E-value=11 Score=36.75 Aligned_cols=82 Identities=24% Similarity=0.388 Sum_probs=58.6
Q ss_pred cccEEEEeeEEec-CCceEEEcCC-----------------------ceeEEEEeeEEcCCceEEEeccCCCCCCCCEEE
Q 041224 208 SSNVQIRDCTIAT-GDDCVAIGTD-----------------------TSNIAVTGVICGPGHGISIGSLGANGGTSIVED 263 (400)
Q Consensus 208 s~nV~I~n~~i~~-~dD~i~i~s~-----------------------~~ni~i~n~~~~~~~gi~igs~g~~~~~~~i~n 263 (400)
+=|..++++.... -.|++.+++. -.|-+|.|..+.++-|+.+|-.| ..++++|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmdg---~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG---KGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE---ESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 4567888877544 5788888862 25788999988888777776655 3678899
Q ss_pred EEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCC
Q 041224 264 VHVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSD 304 (400)
Q Consensus 264 i~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~ 304 (400)
|++++| ...|..+.++ +-+|+||++-++.
T Consensus 453 itv~dc----ag~g~~~~~~--------~~~ftni~vid~n 481 (666)
T 2xc1_A 453 ITVEDC----AGSGAYLLTH--------ESVFTNIAIIDTN 481 (666)
T ss_dssp EEEESC----SSEEEEEEEE--------SCEEEEEEEESCC
T ss_pred eEehhc----cCcceEEeec--------cceeeeeEEEecc
Confidence 988888 3346555554 3478888887764
No 84
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=88.63 E-value=0.17 Score=48.66 Aligned_cols=40 Identities=30% Similarity=0.349 Sum_probs=30.2
Q ss_pred cCccCCCCcchHHHHHHHHHHHhcCCCCCceEEecCCCEEEeeee
Q 041224 38 FGAVGDGETDDSQAFLKAWKSICGSKSNAAPLLVPAGKTFLLNPV 82 (400)
Q Consensus 38 ~Ga~gdg~tddt~aiq~Ai~~a~~~~~gg~~v~iP~G~~Y~~~~l 82 (400)
=||+|||++|||+||..|+. +.. ++.++=-.|+||.+..|
T Consensus 4 ~~a~gdgvtddt~a~~~~l~-~~~----~~~~IDG~G~T~kVs~l 43 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALN-DTP----VGQKINGNGKTYKVTSL 43 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHH-HSC----TTSCEECTTCEEECSSC
T ss_pred CcccCCCccCcHHHHHHHhc-cCC----CCeEEeCCCceEEeeeC
Confidence 38999999999999999994 333 34566667778877644
No 85
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=87.50 E-value=4 Score=38.21 Aligned_cols=82 Identities=24% Similarity=0.388 Sum_probs=58.9
Q ss_pred cccEEEEeeEEec-CCceEEEcCC-----------------------ceeEEEEeeEEcCCceEEEeccCCCCCCCCEEE
Q 041224 208 SSNVQIRDCTIAT-GDDCVAIGTD-----------------------TSNIAVTGVICGPGHGISIGSLGANGGTSIVED 263 (400)
Q Consensus 208 s~nV~I~n~~i~~-~dD~i~i~s~-----------------------~~ni~i~n~~~~~~~gi~igs~g~~~~~~~i~n 263 (400)
+=|..++++.... -.|++.+++. -.|-+|.|..+.++-|+.+|-.| ..++++|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG---~G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG---KGMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEEE---ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 4567888877554 5788888862 25788999998888777777655 3678999
Q ss_pred EEEEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecCC
Q 041224 264 VHVRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESSD 304 (400)
Q Consensus 264 i~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~~ 304 (400)
|++++| ...|..+.++ +-+|+||++-++.
T Consensus 346 itv~DC----AGsG~~~~t~--------~~~FtNi~vID~N 374 (559)
T 2vfm_A 346 ITVEDC----AGSGAYLLTH--------ESVFTNIAIIDTN 374 (559)
T ss_dssp EEEESC----SSEEEEEEEE--------SCEEEEEEEESCC
T ss_pred eEehhc----cCcceEEeec--------cceeeeeEEEecc
Confidence 998888 3346555554 3478888887764
No 86
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=85.51 E-value=13 Score=35.48 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=55.1
Q ss_pred cccEEEEeeE-EecCCceEEEcCC---------------------ceeEEEEeeEEcCCceEEEeccCCCCCCCCEEEEE
Q 041224 208 SSNVQIRDCT-IATGDDCVAIGTD---------------------TSNIAVTGVICGPGHGISIGSLGANGGTSIVEDVH 265 (400)
Q Consensus 208 s~nV~I~n~~-i~~~dD~i~i~s~---------------------~~ni~i~n~~~~~~~gi~igs~g~~~~~~~i~ni~ 265 (400)
|=|..++|+. |+..-|++.+.+. -.|-.|+|+...++.|+.+|-.| ..+.++||+
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~lGVG~~~DG---~~~~v~ni~ 338 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDCMGIGAWWDG---QKNIIDNVV 338 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESCSSCSSEECS---SSCEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccceeeeeecC---CCCeEeeEE
Confidence 4567777776 4556788888862 25778888888888888776654 468899999
Q ss_pred EEeeEEeCCcceEEEEeecCCCeeEEeEEEEeEEEecC
Q 041224 266 VRDCTFKGTKNGARIKTWQGGSGHARRISFERIRLESS 303 (400)
Q Consensus 266 v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f~ni~~~~~ 303 (400)
+++|. ..|+.+..+ +=.|.||++-++
T Consensus 339 ~~dca----g~G~~~~~~--------~~~ftNitvI~~ 364 (543)
T 3riq_A 339 TYEAH----KEGMFDRGT--------NNDITNITVVCA 364 (543)
T ss_dssp EESCS----SCSEEECSS--------SCEEEEEEEESC
T ss_pred eeccc----cCcceeecc--------CcceeeEEEEec
Confidence 88872 345555443 225666666544
No 87
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=75.65 E-value=18 Score=33.72 Aligned_cols=52 Identities=15% Similarity=0.185 Sum_probs=34.4
Q ss_pred ceEEeceEEECCCCCCCCCeeeecCcccEEEEeeEEec-CCceEEEcCCceeEEEEeeEE
Q 041224 183 DVSISNLKIIAPESSPNTDGIDITHSSNVQIRDCTIAT-GDDCVAIGTDTSNIAVTGVIC 241 (400)
Q Consensus 183 nv~i~~~~I~~~~~~~n~DGi~i~~s~nV~I~n~~i~~-~dD~i~i~s~~~ni~i~n~~~ 241 (400)
..+++|+.|-. ...||||... -+.+|+|+++.. +.|++.+++ ..+.|.+.-.
T Consensus 159 GatlkNvIiG~----~~~dGIHC~~-G~CtleNVwwedVcEDA~T~kg--~~~~I~GGgA 211 (344)
T 3b4n_A 159 ATVKNLRISAS----GGADGIHCDS-GNCTIENVIWEDICEDAATNNG--KTMTIVGGIA 211 (344)
T ss_dssp CEEEEEEECTT----CCTTCEEEEE-SEEEEEEEEESSCSSCSEEECS--SEEEEESCEE
T ss_pred CcEEEEEEecC----CCccceEEcc-CCeeEEEEeehhcccccceecC--ceEEEECchh
Confidence 46677777644 2478888762 257888888875 688888885 3555555443
No 88
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=75.10 E-value=60 Score=31.10 Aligned_cols=68 Identities=9% Similarity=0.101 Sum_probs=37.3
Q ss_pred ceeEEEEeeEEcCC--ceEEEeccCCCC-------------CCCCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeEEE
Q 041224 231 TSNIAVTGVICGPG--HGISIGSLGANG-------------GTSIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRISF 295 (400)
Q Consensus 231 ~~ni~i~n~~~~~~--~gi~igs~g~~~-------------~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI~f 295 (400)
+-|..++++..-.. +|+-+++..... -..--.|=.++|+...++ .|+-+. +.|.++.|+||+.
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~-lGVG~~-~DG~~~~v~ni~~ 339 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDC-MGIGAW-WDGQKNIIDNVVT 339 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESC-SSCSSE-ECSSSCEEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheecc-ceeeee-ecCCCCeEeeEEe
Confidence 46888888876443 477777631111 001112334555555554 344332 3366788998887
Q ss_pred EeEEE
Q 041224 296 ERIRL 300 (400)
Q Consensus 296 ~ni~~ 300 (400)
+++.-
T Consensus 340 ~dcag 344 (543)
T 3riq_A 340 YEAHK 344 (543)
T ss_dssp ESCSS
T ss_pred ecccc
Confidence 76643
No 89
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=62.32 E-value=1e+02 Score=28.87 Aligned_cols=66 Identities=12% Similarity=0.098 Sum_probs=39.7
Q ss_pred ceeEEEEeeEEcCC--ceEEEeccCC--CC-------------CCCCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeE
Q 041224 231 TSNIAVTGVICGPG--HGISIGSLGA--NG-------------GTSIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRI 293 (400)
Q Consensus 231 ~~ni~i~n~~~~~~--~gi~igs~g~--~~-------------~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI 293 (400)
.-|..+++...-.. +|+-+|+... .+ ...--.|=.+.|+.+.++ -|+-+... +.++.|+||
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G~G~YVSNi 346 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-GKGMYVSNI 346 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECC-SSEEEEEE-EESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-CCCceEeee
Confidence 46888998876543 4788877511 10 011223556777777775 45555543 456788877
Q ss_pred EEEeE
Q 041224 294 SFERI 298 (400)
Q Consensus 294 ~f~ni 298 (400)
+++++
T Consensus 347 tv~DC 351 (559)
T 2vfm_A 347 TVEDC 351 (559)
T ss_dssp EEESC
T ss_pred Eehhc
Confidence 77766
No 90
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=56.92 E-value=1.2e+02 Score=27.88 Aligned_cols=17 Identities=0% Similarity=0.122 Sum_probs=10.7
Q ss_pred EeEEEEeEEEecCCccE
Q 041224 291 RRISFERIRLESSDNPI 307 (400)
Q Consensus 291 ~nI~f~ni~~~~~~~~i 307 (400)
++|+++|+++.+++-|-
T Consensus 166 ~dvsv~~i~fsn~~g~g 182 (542)
T 2x3h_A 166 SDVTVSDVNFSNVKGTG 182 (542)
T ss_dssp EEEEEEEEEEEEECSBE
T ss_pred CcceEeeeeeeecCCCc
Confidence 56666666666666543
No 91
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=43.99 E-value=69 Score=30.04 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=39.4
Q ss_pred ceeEEEEeeEEcCC--ceEEEeccCC--CC-------------CCCCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeE
Q 041224 231 TSNIAVTGVICGPG--HGISIGSLGA--NG-------------GTSIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRI 293 (400)
Q Consensus 231 ~~ni~i~n~~~~~~--~gi~igs~g~--~~-------------~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI 293 (400)
.-|..+++...-.. +|+-+|+... .+ ...--.|=.+.|+.+.++ -|+-+... +.++.|+||
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G~G~YVSNi 349 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS-LGVGLGMD-GSGGYVSNV 349 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-EESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-CCCceEeee
Confidence 46888998876543 4777777511 10 011223556777777776 45555543 456788877
Q ss_pred EEEeE
Q 041224 294 SFERI 298 (400)
Q Consensus 294 ~f~ni 298 (400)
+++++
T Consensus 350 tv~DC 354 (559)
T 2v5i_A 350 TVQDC 354 (559)
T ss_dssp EEESC
T ss_pred Eehhc
Confidence 77766
No 92
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=33.92 E-value=1.2e+02 Score=29.69 Aligned_cols=66 Identities=12% Similarity=0.098 Sum_probs=39.9
Q ss_pred ceeEEEEeeEEcCC--ceEEEeccCC--CC-------------CCCCEEEEEEEeeEEeCCcceEEEEeecCCCeeEEeE
Q 041224 231 TSNIAVTGVICGPG--HGISIGSLGA--NG-------------GTSIVEDVHVRDCTFKGTKNGARIKTWQGGSGHARRI 293 (400)
Q Consensus 231 ~~ni~i~n~~~~~~--~gi~igs~g~--~~-------------~~~~i~ni~v~N~~~~~~~~gi~i~~~~~~~g~i~nI 293 (400)
.-|..+++...-.. +|+-+|+... .+ ...--.|=.+.|+.+.++ -|+-+... +.++.|+||
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gmd-g~g~yvsni 453 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-GKGMYVSNI 453 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-EESCEEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-CCCceEeee
Confidence 46888998876543 4788887511 11 011223556777777776 45555543 456788877
Q ss_pred EEEeE
Q 041224 294 SFERI 298 (400)
Q Consensus 294 ~f~ni 298 (400)
+++++
T Consensus 454 tv~dc 458 (666)
T 2xc1_A 454 TVEDC 458 (666)
T ss_dssp EEESC
T ss_pred Eehhc
Confidence 77766
No 93
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=21.17 E-value=3.4e+02 Score=25.35 Aligned_cols=96 Identities=10% Similarity=0.164 Sum_probs=0.0
Q ss_pred EEeeeeceEE-ecCeeEeCCCccccccCCCCCCceEEEeeeCcEEEEceEEeCCCCceEEEEeecceEEeceEEECCCCC
Q 041224 119 LFSNVNGLTV-NGNGKIDGKGASWWSNKQNQRPTALSFGSCNNLVFRGLTHVDSPGNHISVYGCNDVSISNLKIIAPESS 197 (400)
Q Consensus 119 ~~~~~~nv~I-~G~G~idg~g~~~~~~~~~~rp~~i~~~~~~nv~i~~v~i~ns~~~~i~~~~~~nv~i~~~~I~~~~~~ 197 (400)
.+.+.+|-+| ...|.+.++. +.+.+|++.+| ..-.+.-.+++.+|+|.+|-=--+..+
T Consensus 43 ~i~~~~~~ti~~~~~~i~g~~--------------v~I~nc~~c~I----~l~~~~~sl~I~~c~nC~Iv~GpV~gs--- 101 (352)
T 3bh7_B 43 MFSGLKDETVGRLPGTVAGQQ--------------FLIQDCENCNI----YIFDHSATVTIDDCTNCIIFLGPVKGS--- 101 (352)
T ss_dssp EEESCBSCEEEECTTSSTTCC--------------EEEESCBSCEE----EECSCBSCEEEESCBSCEEEEEEEEEE---
T ss_pred EEECccCCEEEECCCcccCCc--------------EEEecCcCCEE----EEecCCceEEEecCCCCEEEEccccce---
Q ss_pred CCCCeeeecCcccEEE----EeeEEecCCceEEEcCCceeEEEEeeE
Q 041224 198 PNTDGIDITHSSNVQI----RDCTIATGDDCVAIGTDTSNIAVTGVI 240 (400)
Q Consensus 198 ~n~DGi~i~~s~nV~I----~n~~i~~~dD~i~i~s~~~ni~i~n~~ 240 (400)
+.+..|+|++| +..++++..++-..-.-.+.-.|++|.
T Consensus 102 -----v~I~~C~n~~i~vac~QlRih~c~n~~~yL~~~s~PIIEdc~ 143 (352)
T 3bh7_B 102 -----VFFRNCRDCKCTLACQQFRVRDCRKLEVFLCCATQPIIESSS 143 (352)
T ss_dssp -----EEEESCEEEEEEEEEEEEEEESCEEEEEEEEESSCCEEESCE
T ss_pred -----EEEEcCCCcEEEEEcceEEEecccCcEEEEEcCCCcEEEcCC
No 94
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=20.06 E-value=5.8e+02 Score=24.42 Aligned_cols=113 Identities=15% Similarity=0.077 Sum_probs=76.6
Q ss_pred eecceEEeceEEECCCCC------CCCCeeeecCcccEEEEeeEEecCCceEEEcC----------CceeEEEEeeEEcC
Q 041224 180 GCNDVSISNLKIIAPESS------PNTDGIDITHSSNVQIRDCTIATGDDCVAIGT----------DTSNIAVTGVICGP 243 (400)
Q Consensus 180 ~~~nv~i~~~~I~~~~~~------~n~DGi~i~~s~nV~I~n~~i~~~dD~i~i~s----------~~~ni~i~n~~~~~ 243 (400)
..+++.++|++|.|.... .-.-.+.+. +.+..+.+|.|....|-+.... ....-++++|++.+
T Consensus 199 ~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~-gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeG 277 (422)
T 3grh_A 199 QNNGLQLQNLTIENTLGDSVDAGNHPAVALRTD-GDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEG 277 (422)
T ss_dssp CCTTCEEEEEEEEETTGGGSCSSCCCCCSEEEC-CSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEE
T ss_pred ECCCEEEEeeEEEeCCCCCCCCCCCceEEEEec-CCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEec
Confidence 457899999999985321 112234444 5889999999999999887743 24578899999998
Q ss_pred CceEEEeccCCCCCCCCEEEEEEEeeEEeCCcc----eEEEEeecCCCeeEEeEEEEeEEEecC
Q 041224 244 GHGISIGSLGANGGTSIVEDVHVRDCTFKGTKN----GARIKTWQGGSGHARRISFERIRLESS 303 (400)
Q Consensus 244 ~~gi~igs~g~~~~~~~i~ni~v~N~~~~~~~~----gi~i~~~~~~~g~i~nI~f~ni~~~~~ 303 (400)
.-.+-+|.. ...|+||++.-... +-.|.........-....|.|+++...
T Consensus 278 tVDFIFG~a----------~AvFe~C~I~s~~~~~~~~g~ITA~~t~~~~~~Gfvf~nC~ita~ 331 (422)
T 3grh_A 278 DVDIVSGRG----------AVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAF 331 (422)
T ss_dssp SEEEEEESS----------EEEEESCEEEECCSSCSSCCEEEEECCBTTCCCCEEEESCEEEEC
T ss_pred cccEEccCc----------eEEEEeeEEEEecCCCCCceEEEecCCCCCCCCEEEEECCEEEeC
Confidence 878888742 47899999874321 233443322223335678999999853
Done!