Query 041225
Match_columns 658
No_of_seqs 358 out of 3208
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 04:58:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041225.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041225hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03190 aminophospholipid tra 100.0 5E-100 1E-104 879.9 53.4 614 1-648 413-1039(1178)
2 KOG0206 P-type ATPase [General 100.0 1E-101 2E-106 861.6 33.8 597 1-647 347-957 (1151)
3 TIGR01652 ATPase-Plipid phosph 100.0 1.7E-91 3.7E-96 818.9 53.6 598 1-647 319-935 (1057)
4 KOG0210 P-type ATPase [Inorgan 100.0 1.8E-85 3.9E-90 669.6 33.0 541 1-625 373-917 (1051)
5 COG0474 MgtA Cation transport 100.0 2.5E-70 5.4E-75 626.3 32.8 431 23-619 330-765 (917)
6 KOG0202 Ca2+ transporting ATPa 100.0 5.7E-68 1.2E-72 556.3 29.7 500 23-645 314-830 (972)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 1.1E-64 2.4E-69 585.0 43.9 504 23-625 341-883 (1053)
8 KOG0204 Calcium transporting A 100.0 7.9E-66 1.7E-70 539.5 27.6 473 16-650 414-904 (1034)
9 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2E-63 4.3E-68 573.2 40.0 481 23-627 271-764 (917)
10 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1.6E-62 3.5E-67 569.2 38.2 477 23-622 326-813 (997)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 3.6E-61 7.9E-66 556.6 38.1 434 23-624 358-799 (941)
12 TIGR01657 P-ATPase-V P-type AT 100.0 7.5E-59 1.6E-63 542.2 42.5 485 23-619 430-922 (1054)
13 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2.4E-57 5.2E-62 521.7 40.2 446 23-635 306-760 (884)
14 PRK15122 magnesium-transportin 100.0 2.8E-57 6.1E-62 518.1 37.4 417 23-632 351-774 (903)
15 PRK10517 magnesium-transportin 100.0 6E-57 1.3E-61 514.5 37.5 420 23-637 353-779 (902)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 5E-56 1.1E-60 507.5 39.1 408 23-625 318-732 (867)
17 KOG0203 Na+/K+ ATPase, alpha s 100.0 1.6E-55 3.5E-60 461.6 17.7 477 23-621 348-834 (1019)
18 TIGR01647 ATPase-IIIA_H plasma 100.0 3.9E-53 8.4E-58 477.8 37.2 394 23-627 268-663 (755)
19 KOG0208 Cation transport ATPas 100.0 2E-52 4.3E-57 444.9 33.2 538 20-653 447-1009(1140)
20 PRK14010 potassium-transportin 100.0 2.3E-46 5E-51 408.4 30.2 363 22-627 279-655 (673)
21 PRK01122 potassium-transportin 100.0 1.4E-44 3.1E-49 394.7 31.9 366 22-627 279-659 (679)
22 TIGR01497 kdpB K+-transporting 100.0 5.4E-43 1.2E-47 381.4 29.3 366 23-627 281-660 (675)
23 TIGR01494 ATPase_P-type ATPase 100.0 8.1E-39 1.8E-43 349.1 29.7 270 24-570 213-483 (499)
24 KOG0209 P-type ATPase [Inorgan 100.0 2E-39 4.4E-44 338.5 15.6 369 24-518 462-836 (1160)
25 COG2217 ZntA Cation transport 100.0 9.2E-37 2E-41 333.2 25.0 295 23-571 387-682 (713)
26 KOG0205 Plasma membrane H+-tra 100.0 5.3E-36 1.2E-40 305.9 18.4 346 22-565 308-661 (942)
27 PRK11033 zntA zinc/cadmium/mer 100.0 9.7E-35 2.1E-39 327.3 24.7 289 23-569 418-709 (741)
28 KOG0207 Cation transport ATPas 100.0 1.5E-33 3.2E-38 301.5 26.2 335 23-603 564-899 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 4.5E-34 9.7E-39 314.6 21.5 300 22-569 227-528 (556)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 2.2E-32 4.8E-37 300.1 24.2 287 23-569 259-547 (562)
31 PRK10671 copA copper exporting 100.0 5.6E-32 1.2E-36 311.3 24.8 294 22-568 498-792 (834)
32 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.1E-30 2.3E-35 285.9 27.2 280 22-570 227-508 (536)
33 COG2216 KdpB High-affinity K+ 100.0 1.2E-28 2.6E-33 246.8 17.7 369 21-627 279-661 (681)
34 PRK10513 sugar phosphate phosp 99.9 1.8E-24 4E-29 218.2 14.7 229 299-534 4-257 (270)
35 PRK10976 putative hydrolase; P 99.9 5.3E-24 1.1E-28 214.2 14.3 230 299-534 3-253 (266)
36 PRK15126 thiamin pyrimidine py 99.9 5.2E-23 1.1E-27 207.5 15.4 227 299-533 3-250 (272)
37 PLN02887 hydrolase family prot 99.9 4.1E-23 8.9E-28 223.0 14.8 235 296-535 306-569 (580)
38 COG0561 Cof Predicted hydrolas 99.9 5.7E-23 1.2E-27 206.4 13.4 233 299-538 4-254 (264)
39 PF08282 Hydrolase_3: haloacid 99.9 1.2E-22 2.7E-27 203.0 12.5 226 302-534 2-247 (254)
40 PRK10530 pyridoxal phosphate ( 99.9 2E-21 4.4E-26 196.4 15.2 231 299-534 4-260 (272)
41 TIGR00099 Cof-subfamily Cof su 99.9 2.7E-21 5.8E-26 193.3 14.7 226 301-533 2-248 (256)
42 PF00702 Hydrolase: haloacid d 99.8 1.2E-20 2.6E-25 183.8 11.2 98 305-508 114-215 (215)
43 PRK03669 mannosyl-3-phosphogly 99.8 2.2E-20 4.9E-25 187.8 12.8 219 299-533 8-256 (271)
44 PRK01158 phosphoglycolate phos 99.8 3.9E-20 8.4E-25 182.0 13.1 196 299-534 4-218 (230)
45 TIGR01487 SPP-like sucrose-pho 99.8 1E-19 2.2E-24 176.8 11.4 201 300-533 3-207 (215)
46 TIGR01482 SPP-subfamily Sucros 99.8 1.9E-19 4E-24 176.6 11.5 205 302-534 2-210 (225)
47 TIGR01486 HAD-SF-IIB-MPGP mann 99.8 6E-18 1.3E-22 168.9 16.1 215 301-534 2-245 (256)
48 PRK00192 mannosyl-3-phosphogly 99.8 3.1E-18 6.7E-23 172.5 12.0 213 299-529 5-252 (273)
49 TIGR02463 MPGP_rel mannosyl-3- 99.7 5.7E-17 1.2E-21 158.3 14.5 196 301-513 2-220 (221)
50 PRK14502 bifunctional mannosyl 99.7 2.9E-17 6.3E-22 176.4 13.1 213 297-518 415-661 (694)
51 PTZ00174 phosphomannomutase; P 99.7 1.2E-17 2.5E-22 165.3 7.1 214 298-529 5-245 (247)
52 TIGR02461 osmo_MPG_phos mannos 99.7 2E-16 4.2E-21 153.6 12.6 192 301-513 2-224 (225)
53 TIGR01485 SPP_plant-cyano sucr 99.7 3.1E-16 6.8E-21 155.7 11.6 201 300-526 3-221 (249)
54 TIGR02471 sucr_syn_bact_C sucr 99.7 2.5E-16 5.4E-21 155.2 10.8 205 301-532 2-222 (236)
55 PLN02382 probable sucrose-phos 99.6 5.3E-16 1.2E-20 163.3 9.9 200 299-526 10-232 (413)
56 PRK12702 mannosyl-3-phosphogly 99.6 2.8E-15 6.2E-20 145.4 11.2 201 300-518 3-256 (302)
57 PRK10187 trehalose-6-phosphate 99.6 2.2E-14 4.8E-19 142.9 13.6 198 299-535 15-236 (266)
58 PLN02423 phosphomannomutase 99.6 2.5E-14 5.3E-19 140.9 13.5 198 301-517 10-234 (245)
59 PF13246 Hydrolase_like2: Puta 99.6 4.4E-15 9.5E-20 121.4 5.8 90 123-236 1-90 (91)
60 TIGR01484 HAD-SF-IIB HAD-super 99.5 6.3E-14 1.4E-18 135.0 11.0 184 301-513 2-204 (204)
61 COG4087 Soluble P-type ATPase 99.4 9.5E-13 2.1E-17 109.0 9.5 116 316-538 28-145 (152)
62 PRK14501 putative bifunctional 99.3 2.9E-11 6.4E-16 138.0 15.1 194 299-534 493-715 (726)
63 TIGR01670 YrbI-phosphatas 3-de 99.3 9.5E-12 2.1E-16 113.3 7.0 121 300-532 3-135 (154)
64 PF05116 S6PP: Sucrose-6F-phos 99.3 7.9E-12 1.7E-16 123.2 6.8 190 301-520 5-212 (247)
65 PRK09484 3-deoxy-D-manno-octul 99.2 1.8E-11 3.9E-16 115.0 8.2 122 299-530 22-153 (183)
66 TIGR00685 T6PP trehalose-phosp 99.1 5.4E-10 1.2E-14 110.4 12.9 75 460-537 152-237 (244)
67 TIGR02726 phenyl_P_delta pheny 99.1 2.3E-10 4.9E-15 104.9 8.5 123 299-531 8-140 (169)
68 PLN02580 trehalose-phosphatase 99.1 2.7E-09 5.8E-14 109.5 15.7 249 272-538 91-372 (384)
69 PRK11133 serB phosphoserine ph 99.1 9.8E-10 2.1E-14 111.8 11.3 129 318-538 181-312 (322)
70 PLN02205 alpha,alpha-trehalose 99.0 1.2E-09 2.7E-14 124.5 12.4 174 299-508 597-801 (854)
71 COG0560 SerB Phosphoserine pho 99.0 2.2E-09 4.7E-14 102.7 11.0 124 317-532 76-202 (212)
72 COG3769 Predicted hydrolase (H 99.0 7.6E-09 1.7E-13 94.2 11.7 198 299-515 8-236 (274)
73 PLN03017 trehalose-phosphatase 98.9 4.4E-08 9.5E-13 99.7 16.9 224 272-538 83-354 (366)
74 TIGR02137 HSK-PSP phosphoserin 98.8 6.4E-08 1.4E-12 92.2 11.2 114 318-527 68-181 (203)
75 TIGR00338 serB phosphoserine p 98.7 6.1E-08 1.3E-12 94.4 11.3 128 318-538 85-216 (219)
76 COG1778 Low specificity phosph 98.7 3E-08 6.5E-13 85.8 6.1 56 475-531 83-141 (170)
77 PLN02151 trehalose-phosphatase 98.6 8.2E-07 1.8E-11 90.2 15.2 223 273-538 71-340 (354)
78 smart00775 LNS2 LNS2 domain. T 98.6 1E-07 2.3E-12 86.7 7.6 54 301-354 2-66 (157)
79 KOG1615 Phosphoserine phosphat 98.6 1.1E-07 2.4E-12 85.1 6.8 130 318-533 88-219 (227)
80 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 5.1E-07 1.1E-11 86.6 10.1 118 318-526 80-200 (201)
81 cd01427 HAD_like Haloacid deha 98.5 1.1E-07 2.4E-12 84.6 4.8 58 301-358 2-64 (139)
82 PRK13582 thrH phosphoserine ph 98.2 1.1E-05 2.4E-10 77.6 11.9 122 318-535 68-191 (205)
83 PF02358 Trehalose_PPase: Treh 98.2 3E-06 6.5E-11 83.3 7.7 196 302-531 1-233 (235)
84 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.2 3E-06 6.6E-11 81.3 7.3 41 318-358 87-127 (202)
85 PLN02954 phosphoserine phospha 98.1 1.6E-05 3.5E-10 77.6 10.9 41 318-358 84-124 (224)
86 TIGR01488 HAD-SF-IB Haloacid D 98.1 8.7E-06 1.9E-10 76.3 8.4 41 318-358 73-113 (177)
87 PF12710 HAD: haloacid dehalog 98.1 1.2E-05 2.6E-10 76.3 9.4 38 321-358 92-129 (192)
88 TIGR03333 salvage_mtnX 2-hydro 98.1 1.9E-05 4.2E-10 76.4 9.6 39 318-356 70-108 (214)
89 TIGR01662 HAD-SF-IIIA HAD-supe 98.0 1.5E-05 3.2E-10 70.7 7.7 57 301-357 3-72 (132)
90 TIGR01545 YfhB_g-proteo haloac 98.0 4.1E-05 8.9E-10 73.5 10.4 108 318-515 94-202 (210)
91 TIGR01489 DKMTPPase-SF 2,3-dik 97.9 4.2E-05 9.1E-10 72.4 9.3 41 318-358 72-112 (188)
92 PRK11590 hypothetical protein; 97.9 0.00012 2.6E-09 70.6 12.3 108 318-515 95-203 (211)
93 COG1877 OtsB Trehalose-6-phosp 97.9 0.00035 7.5E-09 68.6 15.3 172 299-508 19-218 (266)
94 PRK13222 phosphoglycolate phos 97.9 7.1E-05 1.5E-09 73.1 9.7 41 318-358 93-133 (226)
95 PRK08238 hypothetical protein; 97.9 0.0003 6.6E-09 75.8 15.1 40 318-357 72-111 (479)
96 PRK09552 mtnX 2-hydroxy-3-keto 97.9 7.3E-05 1.6E-09 72.6 9.5 38 318-355 74-111 (219)
97 COG0546 Gph Predicted phosphat 97.7 8.2E-05 1.8E-09 72.3 7.5 43 318-360 89-131 (220)
98 TIGR01454 AHBA_synth_RP 3-amin 97.7 0.00016 3.4E-09 69.6 9.2 41 318-358 75-115 (205)
99 TIGR00213 GmhB_yaeD D,D-heptos 97.7 8.8E-05 1.9E-09 69.3 7.1 46 300-345 3-53 (176)
100 PRK13223 phosphoglycolate phos 97.7 0.00014 3.1E-09 73.0 8.8 40 318-357 101-140 (272)
101 TIGR01457 HAD-SF-IIA-hyp2 HAD- 97.7 0.00011 2.3E-09 72.9 7.7 66 301-370 4-72 (249)
102 TIGR01449 PGP_bact 2-phosphogl 97.7 0.00015 3.3E-09 70.1 8.5 41 318-358 85-125 (213)
103 PRK10826 2-deoxyglucose-6-phos 97.7 0.00018 3.8E-09 70.2 8.9 42 318-359 92-133 (222)
104 TIGR01672 AphA HAD superfamily 97.6 9.7E-05 2.1E-09 71.8 5.9 36 323-358 119-158 (237)
105 PHA02530 pseT polynucleotide k 97.6 0.0001 2.2E-09 75.5 6.5 59 300-358 160-227 (300)
106 PRK06769 hypothetical protein; 97.6 0.00023 5.1E-09 66.1 7.6 46 300-345 6-55 (173)
107 TIGR01544 HAD-SF-IE haloacid d 97.5 0.0013 2.8E-08 65.0 12.8 44 318-361 121-164 (277)
108 PRK08942 D,D-heptose 1,7-bisph 97.5 0.00039 8.5E-09 65.3 8.5 46 299-344 4-55 (181)
109 PRK13288 pyrophosphatase PpaX; 97.5 0.00038 8.2E-09 67.4 8.3 41 318-358 82-122 (214)
110 TIGR01684 viral_ppase viral ph 97.4 0.00013 2.9E-09 71.6 4.3 67 299-369 127-196 (301)
111 TIGR01656 Histidinol-ppas hist 97.4 0.00043 9.4E-09 62.5 7.3 44 301-344 3-53 (147)
112 PRK13225 phosphoglycolate phos 97.4 0.00087 1.9E-08 67.2 10.0 41 318-358 142-182 (273)
113 PLN03063 alpha,alpha-trehalose 97.4 0.0046 9.9E-08 71.4 17.1 56 299-354 508-569 (797)
114 TIGR01681 HAD-SF-IIIC HAD-supe 97.4 0.00016 3.5E-09 63.5 4.2 56 301-356 3-68 (128)
115 PRK13226 phosphoglycolate phos 97.4 0.00075 1.6E-08 66.0 8.8 41 318-358 95-135 (229)
116 TIGR01664 DNA-3'-Pase DNA 3'-p 97.4 0.00035 7.5E-09 64.4 5.9 48 298-345 13-69 (166)
117 TIGR01689 EcbF-BcbF capsule bi 97.3 8.2E-05 1.8E-09 64.3 1.2 50 300-349 3-55 (126)
118 TIGR01261 hisB_Nterm histidino 97.3 0.00038 8.2E-09 63.7 5.6 44 300-343 3-54 (161)
119 PLN03243 haloacid dehalogenase 97.3 0.0012 2.5E-08 65.8 9.3 42 318-359 109-150 (260)
120 PLN03064 alpha,alpha-trehalose 97.2 0.0056 1.2E-07 70.7 14.4 49 460-508 753-811 (934)
121 TIGR03351 PhnX-like phosphonat 97.2 0.0016 3.6E-08 63.2 8.9 41 318-358 87-127 (220)
122 smart00577 CPDc catalytic doma 97.1 0.00069 1.5E-08 61.2 5.4 56 301-357 5-83 (148)
123 TIGR01668 YqeG_hyp_ppase HAD s 97.1 0.0015 3.2E-08 60.5 7.6 56 300-357 27-83 (170)
124 PLN02575 haloacid dehalogenase 97.1 0.0028 6E-08 65.8 9.8 42 318-359 216-257 (381)
125 PHA03398 viral phosphatase sup 97.1 0.00058 1.3E-08 67.2 4.4 59 299-360 129-190 (303)
126 TIGR01422 phosphonatase phosph 97.0 0.0039 8.5E-08 62.0 10.1 42 318-359 99-140 (253)
127 TIGR01686 FkbH FkbH-like domai 97.0 0.00083 1.8E-08 69.2 5.3 55 300-354 5-67 (320)
128 PRK06698 bifunctional 5'-methy 97.0 0.0033 7.1E-08 68.4 10.1 42 318-359 330-371 (459)
129 COG2179 Predicted hydrolase of 97.0 0.0042 9.2E-08 55.2 8.7 55 301-357 31-85 (175)
130 PRK11587 putative phosphatase; 97.0 0.0037 8.1E-08 60.6 9.2 40 318-357 83-122 (218)
131 PLN02645 phosphoglycolate phos 96.9 0.0013 2.7E-08 67.6 5.7 61 299-363 29-92 (311)
132 TIGR01533 lipo_e_P4 5'-nucleot 96.9 0.0083 1.8E-07 59.3 10.9 59 299-357 76-160 (266)
133 TIGR01675 plant-AP plant acid 96.9 0.0032 7E-08 60.4 7.5 30 318-347 120-149 (229)
134 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.8 0.0013 2.8E-08 65.4 4.9 64 301-364 4-70 (257)
135 PF08235 LNS2: LNS2 (Lipin/Ned 96.8 0.0039 8.5E-08 55.8 7.2 49 302-351 3-60 (157)
136 PRK13478 phosphonoacetaldehyde 96.8 0.013 2.9E-07 58.7 11.9 41 318-358 101-141 (267)
137 PLN02770 haloacid dehalogenase 96.8 0.0058 1.3E-07 60.6 9.0 42 318-359 108-149 (248)
138 PRK05446 imidazole glycerol-ph 96.8 0.0031 6.8E-08 65.0 6.9 45 299-343 3-55 (354)
139 PRK11009 aphA acid phosphatase 96.7 0.0047 1E-07 60.1 7.4 40 318-357 114-157 (237)
140 TIGR02253 CTE7 HAD superfamily 96.7 0.01 2.2E-07 57.7 9.7 41 318-358 94-134 (221)
141 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.6 0.0063 1.4E-07 60.1 7.9 55 300-358 10-66 (242)
142 TIGR02468 sucrsPsyn_pln sucros 96.6 0.021 4.5E-07 66.5 13.0 85 431-515 906-1002(1050)
143 PLN02779 haloacid dehalogenase 96.6 0.011 2.5E-07 59.7 9.7 38 318-355 144-181 (286)
144 KOG4383 Uncharacterized conser 96.6 0.039 8.4E-07 59.3 13.3 137 467-609 971-1141(1354)
145 PRK14988 GMP/IMP nucleotidase; 96.5 0.014 3.1E-07 56.7 9.5 41 318-358 93-133 (224)
146 TIGR01548 HAD-SF-IA-hyp1 haloa 96.5 0.0073 1.6E-07 57.5 6.9 43 316-358 104-146 (197)
147 PRK10444 UMP phosphatase; Prov 96.4 0.0036 7.8E-08 61.7 4.3 60 301-364 4-66 (248)
148 TIGR01685 MDP-1 magnesium-depe 96.4 0.023 5.1E-07 52.4 9.3 52 307-358 34-86 (174)
149 TIGR01428 HAD_type_II 2-haloal 96.3 0.015 3.2E-07 55.5 8.2 41 318-358 92-132 (198)
150 PLN02940 riboflavin kinase 96.2 0.019 4E-07 60.7 9.1 40 318-357 93-133 (382)
151 PF03332 PMM: Eukaryotic phosp 96.1 0.013 2.9E-07 55.1 6.3 58 460-517 147-209 (220)
152 PF13344 Hydrolase_6: Haloacid 96.1 0.01 2.2E-07 49.6 5.0 60 302-365 2-64 (101)
153 PF13419 HAD_2: Haloacid dehal 96.1 0.012 2.6E-07 54.4 6.0 43 316-358 75-117 (176)
154 COG4359 Uncharacterized conser 96.1 0.019 4.2E-07 51.7 6.8 43 470-513 142-184 (220)
155 TIGR02009 PGMB-YQAB-SF beta-ph 96.0 0.016 3.5E-07 54.4 6.9 39 318-358 88-126 (185)
156 TIGR01509 HAD-SF-IA-v3 haloaci 96.0 0.029 6.4E-07 52.4 8.6 40 318-358 85-124 (183)
157 PLN02177 glycerol-3-phosphate 96.0 0.049 1.1E-06 59.1 11.2 71 472-551 173-243 (497)
158 TIGR01990 bPGM beta-phosphoglu 95.9 0.02 4.4E-07 53.7 6.8 38 318-357 87-124 (185)
159 PRK09449 dUMP phosphatase; Pro 95.8 0.069 1.5E-06 51.9 10.5 40 318-358 95-134 (224)
160 TIGR01452 PGP_euk phosphoglyco 95.6 0.018 3.8E-07 58.2 5.5 61 300-364 4-67 (279)
161 COG0241 HisB Histidinol phosph 95.6 0.043 9.4E-07 50.5 7.2 44 299-342 6-55 (181)
162 COG4030 Uncharacterized protei 95.6 0.26 5.6E-06 46.1 12.0 60 473-534 189-254 (315)
163 TIGR02254 YjjG/YfnB HAD superf 95.3 0.045 9.7E-07 53.1 7.1 41 318-359 97-137 (224)
164 PLN02811 hydrolase 95.3 0.049 1.1E-06 52.8 7.2 31 318-348 78-108 (220)
165 TIGR02252 DREG-2 REG-2-like, H 95.2 0.083 1.8E-06 50.4 8.4 39 318-357 105-143 (203)
166 PF09419 PGP_phosphatase: Mito 95.2 0.085 1.8E-06 48.1 7.7 55 301-357 44-107 (168)
167 TIGR01549 HAD-SF-IA-v1 haloaci 95.1 0.064 1.4E-06 48.6 6.9 38 318-355 64-101 (154)
168 TIGR01691 enolase-ppase 2,3-di 94.9 0.13 2.9E-06 49.5 8.7 37 318-354 95-131 (220)
169 TIGR01663 PNK-3'Pase polynucle 94.7 0.063 1.4E-06 58.5 6.7 47 299-345 169-224 (526)
170 TIGR01460 HAD-SF-IIA Haloacid 94.5 0.054 1.2E-06 53.1 5.2 53 302-358 2-58 (236)
171 PLN02919 haloacid dehalogenase 93.3 0.33 7.2E-06 58.2 9.5 41 318-358 161-201 (1057)
172 PF06888 Put_Phosphatase: Puta 93.0 0.3 6.5E-06 47.3 7.0 43 318-360 71-115 (234)
173 TIGR02247 HAD-1A3-hyp Epoxide 92.8 0.24 5.3E-06 47.5 6.3 28 318-345 94-121 (211)
174 KOG3120 Predicted haloacid deh 92.6 1.1 2.5E-05 42.0 9.7 40 318-357 84-124 (256)
175 PF03767 Acid_phosphat_B: HAD 92.3 0.43 9.3E-06 46.4 7.2 29 318-346 115-143 (229)
176 TIGR02251 HIF-SF_euk Dullard-l 92.0 0.14 3E-06 46.9 3.3 39 318-357 42-80 (162)
177 KOG3189 Phosphomannomutase [Li 91.6 0.32 6.9E-06 44.6 4.9 53 461-513 179-236 (252)
178 COG0647 NagD Predicted sugar p 91.5 0.23 5.1E-06 49.1 4.4 49 300-352 10-58 (269)
179 PHA02597 30.2 hypothetical pro 91.3 1.2 2.6E-05 42.2 9.0 38 476-513 132-173 (197)
180 PRK09456 ?-D-glucose-1-phospha 90.5 0.73 1.6E-05 43.8 6.7 31 318-348 84-114 (199)
181 PRK10563 6-phosphogluconate ph 90.2 0.42 9.1E-06 46.3 4.9 38 318-358 88-125 (221)
182 PTZ00445 p36-lilke protein; Pr 89.9 0.64 1.4E-05 43.7 5.4 49 299-347 44-104 (219)
183 TIGR01680 Veg_Stor_Prot vegeta 89.6 2 4.3E-05 42.4 8.8 30 318-347 145-174 (275)
184 PRK10725 fructose-1-P/6-phosph 88.1 1.4 3.1E-05 41.2 6.7 35 323-358 92-126 (188)
185 PF08645 PNK3P: Polynucleotide 87.9 0.43 9.4E-06 43.5 2.9 42 301-342 3-53 (159)
186 COG0637 Predicted phosphatase/ 87.8 0.94 2E-05 43.9 5.3 43 318-360 86-128 (221)
187 PF00689 Cation_ATPase_C: Cati 85.8 0.74 1.6E-05 43.0 3.4 39 580-620 1-39 (182)
188 TIGR01993 Pyr-5-nucltdase pyri 85.5 2.9 6.4E-05 38.9 7.3 38 318-358 84-121 (184)
189 TIGR01456 CECR5 HAD-superfamil 83.6 1.3 2.9E-05 45.6 4.3 56 301-360 3-66 (321)
190 PF06437 ISN1: IMP-specific 5' 81.3 14 0.0003 38.1 10.2 49 300-351 149-199 (408)
191 COG3700 AphA Acid phosphatase 81.3 5.2 0.00011 36.2 6.4 31 481-513 179-210 (237)
192 KOG1050 Trehalose-6-phosphate 77.7 9.6 0.00021 43.5 8.8 49 459-507 641-692 (732)
193 PF13242 Hydrolase_like: HAD-h 75.4 5.4 0.00012 30.9 4.4 47 487-533 20-73 (75)
194 PF12689 Acid_PPase: Acid Phos 74.8 20 0.00044 32.9 8.6 51 308-358 35-86 (169)
195 PF05822 UMPH-1: Pyrimidine 5' 74.3 22 0.00047 34.7 9.1 47 318-364 90-136 (246)
196 PF03031 NIF: NLI interacting 74.0 3.3 7.1E-05 37.6 3.3 55 301-356 3-73 (159)
197 PRK10748 flavin mononucleotide 71.2 11 0.00023 37.0 6.4 28 318-346 113-140 (238)
198 TIGR01458 HAD-SF-IIA-hyp3 HAD- 71.0 8.2 0.00018 38.3 5.6 50 487-536 195-251 (257)
199 PF05152 DUF705: Protein of un 70.5 7.1 0.00015 38.5 4.8 61 299-360 123-184 (297)
200 PF11019 DUF2608: Protein of u 70.0 22 0.00048 35.1 8.3 41 317-357 80-123 (252)
201 COG1011 Predicted hydrolase (H 65.5 33 0.00072 32.9 8.7 41 318-359 99-139 (229)
202 PF02261 Asp_decarbox: Asparta 63.3 6.3 0.00014 33.1 2.5 85 149-279 18-102 (116)
203 KOG3040 Predicted sugar phosph 61.4 17 0.00037 34.1 5.1 55 302-360 11-68 (262)
204 COG3981 Predicted acetyltransf 60.3 10 0.00022 34.4 3.4 116 244-359 13-157 (174)
205 PF04312 DUF460: Protein of un 55.3 33 0.00071 30.0 5.5 53 302-357 47-101 (138)
206 PRK05449 aspartate alpha-decar 55.3 22 0.00048 30.4 4.4 84 149-278 18-101 (126)
207 cd06919 Asp_decarbox Aspartate 54.7 21 0.00045 29.8 4.0 84 149-278 17-100 (111)
208 TIGR00223 panD L-aspartate-alp 53.4 23 0.00051 30.2 4.2 84 149-278 18-101 (126)
209 cd02071 MM_CoA_mut_B12_BD meth 52.1 52 0.0011 28.2 6.5 81 253-357 21-103 (122)
210 TIGR01493 HAD-SF-IA-v2 Haloaci 52.1 15 0.00033 33.6 3.5 33 318-357 90-122 (175)
211 PF12710 HAD: haloacid dehalog 51.7 7.1 0.00015 36.4 1.1 31 475-505 157-192 (192)
212 PF06941 NT5C: 5' nucleotidase 47.1 21 0.00046 33.4 3.6 29 318-346 73-101 (191)
213 TIGR02244 HAD-IG-Ncltidse HAD 43.5 52 0.0011 34.0 6.0 38 319-356 185-223 (343)
214 COG0279 GmhA Phosphoheptose is 42.9 18 0.00039 32.6 2.2 34 319-352 121-154 (176)
215 COG2044 Predicted peroxiredoxi 42.5 23 0.00049 30.2 2.6 40 303-342 40-83 (120)
216 COG0853 PanD Aspartate 1-decar 40.7 58 0.0013 27.7 4.6 84 149-278 17-100 (126)
217 TIGR02245 HAD_IIID1 HAD-superf 40.4 45 0.00098 31.4 4.6 61 299-360 22-86 (195)
218 TIGR01459 HAD-SF-IIA-hyp4 HAD- 39.7 25 0.00055 34.4 3.0 24 488-511 213-237 (242)
219 PRK08508 biotin synthase; Prov 39.6 4E+02 0.0087 26.6 12.5 61 323-384 101-177 (279)
220 cd05017 SIS_PGI_PMI_1 The memb 38.5 50 0.0011 28.1 4.3 37 318-356 54-90 (119)
221 cd02067 B12-binding B12 bindin 38.2 1.2E+02 0.0026 25.6 6.7 81 253-357 21-103 (119)
222 TIGR02250 FCP1_euk FCP1-like p 35.7 68 0.0015 29.0 4.9 40 318-358 58-97 (156)
223 KOG2914 Predicted haloacid-hal 35.5 1.3E+02 0.0029 28.9 7.0 36 318-353 92-127 (222)
224 KOG0780 Signal recognition par 35.4 4.6E+02 0.0099 27.6 10.9 78 251-349 121-200 (483)
225 COG4996 Predicted phosphatase 33.5 96 0.0021 26.9 4.9 56 307-362 30-85 (164)
226 PRK10053 hypothetical protein; 33.1 25 0.00055 30.5 1.5 27 27-53 63-89 (130)
227 cd05008 SIS_GlmS_GlmD_1 SIS (S 31.1 47 0.001 28.4 2.9 34 318-351 57-90 (126)
228 COG0552 FtsY Signal recognitio 30.4 6.2E+02 0.013 26.1 12.0 72 249-344 157-233 (340)
229 COG1433 Uncharacterized conser 29.9 1.7E+02 0.0037 25.1 6.0 47 303-358 64-110 (121)
230 COG2503 Predicted secreted aci 29.5 4.1E+02 0.0089 26.0 8.9 30 318-347 122-151 (274)
231 cd05710 SIS_1 A subgroup of th 29.1 53 0.0012 28.0 2.9 33 318-350 58-90 (120)
232 cd05014 SIS_Kpsf KpsF-like pro 28.9 45 0.00098 28.6 2.5 35 318-352 58-92 (128)
233 KOG2116 Protein involved in pl 27.4 95 0.0021 34.5 4.9 51 299-350 531-590 (738)
234 PF11549 Sec31: Protein transp 27.4 22 0.00048 24.6 0.2 11 495-505 23-33 (51)
235 PF13380 CoA_binding_2: CoA bi 25.6 1.1E+02 0.0023 26.1 4.1 39 319-357 64-103 (116)
236 KOG1618 Predicted phosphatase 25.6 1E+02 0.0022 31.2 4.3 59 301-363 38-104 (389)
237 PRK02261 methylaspartate mutas 24.8 4.8E+02 0.01 22.9 9.4 96 254-378 26-129 (137)
238 PF05198 IF3_N: Translation in 24.6 1.2E+02 0.0027 23.5 3.9 34 302-343 17-50 (76)
239 TIGR00156 conserved hypothetic 24.1 51 0.0011 28.5 1.8 27 27-53 59-85 (126)
240 TIGR00640 acid_CoA_mut_C methy 23.6 2.1E+02 0.0046 24.9 5.7 81 253-357 24-106 (132)
241 TIGR01501 MthylAspMutase methy 23.3 5.1E+02 0.011 22.7 8.7 96 254-378 24-127 (134)
242 COG0541 Ffh Signal recognition 23.2 9.5E+02 0.021 25.8 14.5 72 253-345 122-195 (451)
243 KOG0911 Glutaredoxin-related p 22.5 1.8E+02 0.0038 27.9 5.1 68 217-311 139-206 (227)
244 cd05006 SIS_GmhA Phosphoheptos 22.1 69 0.0015 29.5 2.5 30 318-347 112-141 (177)
245 PF00106 adh_short: short chai 21.6 3.1E+02 0.0068 24.3 6.8 62 324-385 14-77 (167)
246 PF13042 DUF3902: Protein of u 21.4 5.9E+02 0.013 22.7 7.6 52 568-624 84-135 (161)
247 TIGR03127 RuMP_HxlB 6-phospho 21.2 82 0.0018 29.0 2.8 35 318-352 83-117 (179)
248 COG4221 Short-chain alcohol de 20.7 5.3E+02 0.011 25.2 8.1 60 325-387 21-80 (246)
249 PF13580 SIS_2: SIS domain; PD 20.6 67 0.0015 28.2 2.0 25 318-342 114-138 (138)
250 COG1210 GalU UDP-glucose pyrop 20.3 6.2E+02 0.013 25.3 8.5 29 320-348 35-64 (291)
251 KOG3128 Uncharacterized conser 20.2 1.9E+02 0.004 28.3 4.8 39 318-356 138-176 (298)
252 PRK13937 phosphoheptose isomer 20.1 86 0.0019 29.3 2.7 34 318-351 117-150 (188)
253 PF06506 PrpR_N: Propionate ca 20.0 6.8E+02 0.015 22.9 9.6 101 246-383 64-164 (176)
No 1
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=4.9e-100 Score=879.94 Aligned_cols=614 Identities=61% Similarity=0.966 Sum_probs=506.4
Q ss_pred CeEEeeeeeehhccccccccCCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHH
Q 041225 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVS 80 (658)
Q Consensus 1 ~e~~~~~~~~~~~~d~~~~~~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~ 80 (658)
+|++|++|++||+||++||++..+.++.||+++++|+||+|++||||||||||+|+|.|++|+++|..|+......+...
T Consensus 413 leivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~ 492 (1178)
T PLN03190 413 MELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDH 492 (1178)
T ss_pred HHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999998874321110000
Q ss_pred -H----HHHhhhccccccccChHHHHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeec
Q 041225 81 -A----AAVRRWKLKSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQG 155 (658)
Q Consensus 81 -~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (658)
. .......+......++.+.+........+......+|++++++||++.+...+...+ ...+.++|+|
T Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~-------~~~~~~~Y~a 565 (1178)
T PLN03190 493 AGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSD-------PTVKLMDYQG 565 (1178)
T ss_pred hccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCC-------ccccceEEec
Confidence 0 000111122222334444443322212223345788999999999998853211000 0012467999
Q ss_pred CChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhh
Q 041225 156 ESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILA 235 (658)
Q Consensus 156 ~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~ 235 (658)
+||+|.||+++|+.+|+.+..|+++.+.+++.|...+|++++++||+|+|||||||++++++.+.+|+||||+.|+++|+
T Consensus 566 ~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~ 645 (1178)
T PLN03190 566 ESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVID 645 (1178)
T ss_pred CCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeecccc
Q 041225 236 KDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGI 315 (658)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~ 315 (658)
... ++..++.+.+++++|+.+|+|||++|||.++++++.+|.++|.++...+.+|++.+.+....+|.|++++|.+++
T Consensus 646 ~~~--~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~ 723 (1178)
T PLN03190 646 RSL--NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAI 723 (1178)
T ss_pred ccc--cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEE
Confidence 543 234677889999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccc
Q 041225 316 EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTK 395 (658)
Q Consensus 316 ~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~ 395 (658)
+|++++++.++|++|+++||++||+|||+..+|.+||++||++.++...+..+....+.+.+.++........
T Consensus 724 ~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~------- 796 (1178)
T PLN03190 724 EDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKK------- 796 (1178)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhh-------
Confidence 9999999999999999999999999999999999999999999998887777766554443333221110000
Q ss_pred ccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCccc
Q 041225 396 CNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475 (658)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~ 475 (658)
.... ...................++++|.++..++...+...+..++..+..+|+||++|.|
T Consensus 797 -------------~~~~-----~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~Q 858 (1178)
T PLN03190 797 -------------LTTV-----SGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQ 858 (1178)
T ss_pred -------------cccc-----ccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHH
Confidence 0000 0000000000011224567999999999988777777888888889999999999999
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhhhhhHHHHHHHHHH
Q 041225 476 KAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVL 555 (658)
Q Consensus 476 K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~gr~~~~~~~~~i~ 555 (658)
|+.+|+.+++..+..|+|||||.||++||++|||||+++|.++.+|+.+|||+++.|+++.+|+|+|||++|+|++++++
T Consensus 859 Ka~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~ 938 (1178)
T PLN03190 859 KAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMIL 938 (1178)
T ss_pred HHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHH
Confidence 99999999997557899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcccccccc--------
Q 041225 556 YNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQY-------- 627 (658)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~-------- 627 (658)
|+||||+++++++|||+++++|||++++++|.+++||++||++|++++|++|+|++++.++++|++|+.++.
T Consensus 939 y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~ 1018 (1178)
T PLN03190 939 YNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKL 1018 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999988762
Q ss_pred chHHHHHHHHHHHHHhhcccc
Q 041225 628 LWPSDIQIAREAEVLRKGSNY 648 (658)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~ 648 (658)
+|.-++..+..+.+..+++.|
T Consensus 1019 F~~w~~~~i~qs~iiff~~~~ 1039 (1178)
T PLN03190 1019 FWLTMIDTLWQSAVVFFVPLF 1039 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344455555666665555544
No 2
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-101 Score=861.61 Aligned_cols=597 Identities=47% Similarity=0.763 Sum_probs=512.6
Q ss_pred CeEEeeeeeehhccccccccCCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHH-H
Q 041225 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQ-V 79 (658)
Q Consensus 1 ~e~~~~~~~~~~~~d~~~~~~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~-~ 79 (658)
+|++|++|++||.||.+||+++.+.++.+|++++.|+||+|++|++|||||||+|.|.|.+|+++|..|++....... .
T Consensus 347 iEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~ 426 (1151)
T KOG0206|consen 347 IEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAAL 426 (1151)
T ss_pred eeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhccc
Confidence 599999999999999999999999999999999999999999999999999999999999999999999876432110 0
Q ss_pred HHH---HHhhhccccccccChHHHHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecC
Q 041225 80 SAA---AVRRWKLKSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGE 156 (658)
Q Consensus 80 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (658)
... ..+....++..+.|+.+.+...... ......++|++++|+||++.+..++. ...+.|++.
T Consensus 427 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~--~~~~~~~~f~~~la~chtv~~e~~~~------------~~~~~Y~A~ 492 (1151)
T KOG0206|consen 427 AKRSGGDVNEHKIKGFTFEDSRLVDGLWSSE--PQAEDILEFFRALALCHTVIPEKDED------------SGKLSYEAE 492 (1151)
T ss_pred Cccccccccccccccceeccchhhccccccc--cCcchHHHHhhHHhccceeeeccCCC------------ccceeeecC
Confidence 000 0011112222334444443322211 35556789999999999999875321 237899999
Q ss_pred ChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhc
Q 041225 157 SPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAK 236 (658)
Q Consensus 157 ~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~ 236 (658)
||||.||++.|+.+|+.+..|++..+.+...|+.++|++|+++||+|.|||||||||+|+|++.+||||||.+|++++..
T Consensus 493 SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~ 572 (1151)
T KOG0206|consen 493 SPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK 572 (1151)
T ss_pred CCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh
Confidence 99999999999999999999999999999888888999999999999999999999999999999999999999999996
Q ss_pred CccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccc
Q 041225 237 DSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIE 316 (658)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~ 316 (658)
. .....+...+|+++|+.+|+||||+|||.++++|+.+|.++|.++...+.+|++.++..+..+|.|++|||.+++|
T Consensus 573 ~---~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIE 649 (1151)
T KOG0206|consen 573 N---GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIE 649 (1151)
T ss_pred c---chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeee
Confidence 2 3567888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHH------HHHHHHHhcCccc
Q 041225 317 DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKD------LLADAKARYGVKS 390 (658)
Q Consensus 317 d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~------ii~~~~~~~~~~~ 390 (658)
|+++++++++|..|++||||+|++|||+.+||.+|+.+|+++.++..++.++..+.+.... +.+....+.
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~---- 725 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKF---- 725 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhh----
Confidence 9999999999999999999999999999999999999999999999999888765331110 001111100
Q ss_pred CccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEE
Q 041225 391 SNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCR 470 (658)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~ 470 (658)
..... ...........+++++|..+...++...+..|...+..|..+|+||
T Consensus 726 ----------------~~~~~-------------~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR 776 (1151)
T KOG0206|consen 726 ----------------TEELE-------------EAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCR 776 (1151)
T ss_pred ----------------hHHHH-------------HHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEcc
Confidence 00000 0000000125789999999999999988889999999999999999
Q ss_pred cCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhhhhhHHHHH
Q 041225 471 VAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRI 550 (658)
Q Consensus 471 ~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~gr~~~~~~ 550 (658)
++|.||+..++.+++..+..++|||||+||++|++.||+||+++|.++.+|..+||+.++.|+++.+|+|+||||+|.|+
T Consensus 777 ~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~ 856 (1151)
T KOG0206|consen 777 VSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRL 856 (1151)
T ss_pred CCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHH
Confidence 99999999999998777789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccc----
Q 041225 551 GYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQ---- 626 (658)
Q Consensus 551 ~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~---- 626 (658)
++++.|+||||+++++++|||+++++|||++++++|++.+||++||++|++++|++|+|++...++++|+||+.+|
T Consensus 857 a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~ 936 (1151)
T KOG0206|consen 857 AKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLL 936 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cchHHHHHHHHHHHHHhhccc
Q 041225 627 YLWPSDIQIAREAEVLRKGSN 647 (658)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~ 647 (658)
+.|+.+.--+..++.....-+
T Consensus 937 f~~~~f~~~~~~g~~~sli~F 957 (1151)
T KOG0206|consen 937 FNWKRFWGWMLDGFYQSLVIF 957 (1151)
T ss_pred cchHHHHHHHHHHHHhheeee
Confidence 466665555555444443333
No 3
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.7e-91 Score=818.91 Aligned_cols=598 Identities=46% Similarity=0.782 Sum_probs=493.3
Q ss_pred CeEEeeeeeehhccccccccCCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHH
Q 041225 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVS 80 (658)
Q Consensus 1 ~e~~~~~~~~~~~~d~~~~~~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~ 80 (658)
+|++|++|++||+||.+|+++.++++++||+++++|+||+|++||||||||||+|+|+|++|+++|..|+..........
T Consensus 319 l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~ 398 (1057)
T TIGR01652 319 LELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAI 398 (1057)
T ss_pred HHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHh
Confidence 47899999999999999999888899999999999999999999999999999999999999999998875322111100
Q ss_pred HHHHhhhcc---------ccccccChHHHHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcce
Q 041225 81 AAAVRRWKL---------KSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAI 151 (658)
Q Consensus 81 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (658)
......+.+ +...+.++++.+.+.. ........+++++++++||++.+..++. ..+.+
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~lC~~v~~~~~~~-----------~~~~~ 465 (1057)
T TIGR01652 399 RERLGSYVENENSMLVESKGFTFVDPRLVDLLKT--NKPNAKRINEFFLALALCHTVVPEFNDD-----------GPEEI 465 (1057)
T ss_pred hhcccccccccccccccccccccCcHHHHHhhhc--CCchhHHHHHHHHHHHhcCcccccccCC-----------CCCce
Confidence 000000000 0011224444443321 1222345788999999999998753111 11236
Q ss_pred eeecCChhHHHHHHHHHHcCcEEEEEcCC--eEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchH
Q 041225 152 DYQGESPDEQALVSAASAYGYTLFERTSG--HIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSS 229 (658)
Q Consensus 152 ~~~~~~p~e~al~~~a~~~g~~~~~~~~~--~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~ 229 (658)
.|.++||+|.||+++|+.+|+.+.+++.. .+.+++.|...+|++++++||+|+|||||||++++++.+.+|+||||+.
T Consensus 466 ~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~ 545 (1057)
T TIGR01652 466 TYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTV 545 (1057)
T ss_pred EEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHH
Confidence 78889999999999999999999999887 5667888999999999999999999999999999999999999999999
Q ss_pred hHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhcccee
Q 041225 230 MFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTL 309 (658)
Q Consensus 230 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTl 309 (658)
|+++|... ++..++.+.+++++|+.+|+||+++|||.++++++.+|.++|.++...+.+|++.+......+|.|++|
T Consensus 546 il~~~~~~---~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~ 622 (1057)
T TIGR01652 546 IFKRLSSG---GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLIL 622 (1057)
T ss_pred HHHHhhcc---chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEE
Confidence 99999853 234577889999999999999999999999999999999999999999999988888888889999999
Q ss_pred eeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcc
Q 041225 310 LGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVK 389 (658)
Q Consensus 310 lg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~ 389 (658)
+|.+|++|+++++++++|+.|+++||++||+|||+.+||.++|+++|++..+.+++..++.+.+++...-........
T Consensus 623 lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~-- 700 (1057)
T TIGR01652 623 LGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLE-- 700 (1057)
T ss_pred EEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHH--
Confidence 999999999999999999999999999999999999999999999999998887777776554443322111111000
Q ss_pred cCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEE
Q 041225 390 SSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCC 469 (658)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~ 469 (658)
...... ..........++++|+++..++++..+.++..++..++.+|++
T Consensus 701 --------------~~~~~~-----------------~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~a 749 (1057)
T TIGR01652 701 --------------GTSEEF-----------------NNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICC 749 (1057)
T ss_pred --------------HHHHhh-----------------hhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEe
Confidence 000000 0001124567899999998888777677788888888899999
Q ss_pred EcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhhhhhHHHH
Q 041225 470 RVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQR 549 (658)
Q Consensus 470 ~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~gr~~~~~ 549 (658)
|++|.||+.+|+.+++..+..|+|+|||.||++||++|||||++.|.++.+|+.+||+++.+|+++.+++++|||++|+|
T Consensus 750 R~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r 829 (1057)
T TIGR01652 750 RVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKR 829 (1057)
T ss_pred CCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHH
Confidence 99999999999999987467999999999999999999999999999988899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccc---
Q 041225 550 IGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQ--- 626 (658)
Q Consensus 550 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~--- 626 (658)
+++++.|.||+|+++++++|+|.++++|++++++++|+++|||+++|++|++++|++++|++++.+.++|++|+.++
T Consensus 830 ~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~ 909 (1057)
T TIGR01652 830 ISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQ 909 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997653
Q ss_pred -----cchHHHHHHHHHHHHHhhccc
Q 041225 627 -----YLWPSDIQIAREAEVLRKGSN 647 (658)
Q Consensus 627 -----~~~~~~~~~~~~~~~~~~~~~ 647 (658)
..|..+++.+.++.+...++.
T Consensus 910 ~~~~~~f~~~~~~~~~~~~ii~~~~~ 935 (1057)
T TIGR01652 910 GFSTKTFWGWMLDGIYQSLVIFFFPM 935 (1057)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233344555555555544443
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-85 Score=669.58 Aligned_cols=541 Identities=35% Similarity=0.554 Sum_probs=467.8
Q ss_pred CeEEeeeeeehhccccccccCCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHH
Q 041225 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVS 80 (658)
Q Consensus 1 ~e~~~~~~~~~~~~d~~~~~~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~ 80 (658)
+++.|++.|+.|+.|.+-. |.+||++++.|+||+|+++.+|||||||+|+|.+++++.+-..|+.+.. ++.+
T Consensus 373 lDmaK~~ys~~i~~D~~Ip------gtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~--~eV~ 444 (1051)
T KOG0210|consen 373 LDMAKIVYSWQIEHDKNIP------GTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETM--DEVS 444 (1051)
T ss_pred hhHHHhhHhhhcccCCCCC------ceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHH--HHHH
Confidence 4678999999999998774 3899999999999999999999999999999999999988777764322 2222
Q ss_pred HHHHhhhccccccccChHHHHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhH
Q 041225 81 AAAVRRWKLKSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDE 160 (658)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e 160 (658)
..-++-+.+... -.+-..... ..+-+..+++..+++|+||+++|..+++ +...|++.||||
T Consensus 445 ~~i~s~~~~~~~--~~~~~~~~~----k~~~s~rv~~~V~alalCHNVTPv~e~~-------------ge~sYQAaSPDE 505 (1051)
T KOG0210|consen 445 QHIQSLYTPGRN--KGKGALSRV----KKDMSARVRNAVLALALCHNVTPVFEDD-------------GEVSYQAASPDE 505 (1051)
T ss_pred HHHHHhhCCCcc--cccccchhh----cCcccHHHHHHHHHHHHhccCCcccCCC-------------ceEEeecCCCCe
Confidence 222222221000 000001011 1234456889999999999999986553 578999999999
Q ss_pred HHHHHHHHHcCcEEEEEcCCeEEEEeC-CcEEEEEEEEeeCCCCCCCeeEEEEEcC-CCcEEEEEeCCchHhHHhhhcCc
Q 041225 161 QALVSAASAYGYTLFERTSGHIVIDIN-GEGLRLDVLGLHEFDSVRKRMSVVIRFP-DNSVKVLVKGADSSMFNILAKDS 238 (658)
Q Consensus 161 ~al~~~a~~~g~~~~~~~~~~~~~~~~-g~~~~~~il~~~~F~s~rk~msviv~~~-~~~~~l~~KGa~e~i~~~~~~~~ 238 (658)
.||+++....|..+..|+.+.+.+..+ +....|+||.+|||+|+.|||++|||++ .+++..|.||||.+|..+....
T Consensus 506 VAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N- 584 (1051)
T KOG0210|consen 506 VAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN- 584 (1051)
T ss_pred EEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-
Confidence 999999999999999999999888766 5678999999999999999999999998 5889999999999998887642
Q ss_pred cccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH-hhhccceeeecccccc
Q 041225 239 KRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAA-LIECDLTLLGATGIED 317 (658)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~DgTllg~~~~~d 317 (658)
..+++...+||++|+|+|++|+|.|+++|++.|...|+++..+..+|.++|.+... .+|.|+.|||..|+||
T Consensus 585 -------dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVED 657 (1051)
T KOG0210|consen 585 -------DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVED 657 (1051)
T ss_pred -------hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHH
Confidence 34567788999999999999999999999999999999999999999999998888 8999999999999999
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC-CHHHHHHHHHHHHHhcCcccCccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN-SEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~-~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
+++++++.+++.||++||++||+|||+.+||..+|++.+++..++.+..+... +.+++..-++.++.
T Consensus 658 kLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~------------ 725 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRR------------ 725 (1051)
T ss_pred HHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhc------------
Confidence 99999999999999999999999999999999999999999877665554432 34444444433332
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
....+++++|+++...++- .+.++.+++..++.+++||++|.||
T Consensus 726 -----------------------------------k~~~aLvi~G~Sl~~cl~y-ye~Ef~el~~~~~aVv~CRctPtQK 769 (1051)
T KOG0210|consen 726 -----------------------------------KTDCALVIDGESLEFCLKY-YEDEFIELVCELPAVVCCRCTPTQK 769 (1051)
T ss_pred -----------------------------------CCCcEEEEcCchHHHHHHH-HHHHHHHHHHhcCcEEEEecChhHH
Confidence 2445889999998776654 5678889999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhhhhhHHHHHHHHHHH
Q 041225 477 AGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVLY 556 (658)
Q Consensus 477 ~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~gr~~~~~~~~~i~~ 556 (658)
+++++.|+++.+..|+|||||.||++|+++||+||++.|+++.+|.-||||.++.|..+.+|+++|||.+|.|.+++.+|
T Consensus 770 A~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqf 849 (1051)
T KOG0210|consen 770 AQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQF 849 (1051)
T ss_pred HHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHHHHHHHHHH
Confidence 99999999997789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcccccc
Q 041225 557 NFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQ 625 (658)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~ 625 (658)
.+.|++++..++.+|+....|...+++..++++.|..++|++|+|.+ +.|+|+++...+.||+||+..
T Consensus 850 ViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yPELYKeL 917 (1051)
T KOG0210|consen 850 VIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYPELYKEL 917 (1051)
T ss_pred HHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhHHHHHHH
Confidence 99999999999999999988999999999999999999999999999 899999999999999999883
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-70 Score=626.28 Aligned_cols=431 Identities=35% Similarity=0.507 Sum_probs=355.4
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcC-cccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCG-KNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
.+++++||+++++|+||++++||||||||||+|+|+|.++++++ ..... +
T Consensus 330 ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~-------------------------~---- 380 (917)
T COG0474 330 AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID-------------------------D---- 380 (917)
T ss_pred HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc-------------------------c----
Confidence 46679999999999999999999999999999999999999985 11000 0
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
..........++++++++||++.+.. . + .+..+||+|.||++++.+.|+.+ .
T Consensus 381 -----~~~~~~~~~~~~l~~~~lc~~~~~~~--------------~-~--~~~~gdptE~Al~~~a~~~~~~~-~----- 432 (917)
T COG0474 381 -----KDLKDSPALLRFLLAAALCNSVTPEK--------------N-G--WYQAGDPTEGALVEFAEKLGFSL-D----- 432 (917)
T ss_pred -----cccccchHHHHHHHHHHhcCcccccc--------------c-C--ceecCCccHHHHHHHHHhcCCcC-C-----
Confidence 00112223447899999999876531 1 1 45566999999999999998754 1
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcC---ccccHHHHHHHHHHHHHHhhc
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKD---SKRNDLIRHITQSHLSEYSSQ 258 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 258 (658)
..+....+++++.+||+|+|||||||++..++++.+|+|||||.|+++|+.. ...++..++.+....++|+.+
T Consensus 433 ----~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 508 (917)
T COG0474 433 ----LSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASE 508 (917)
T ss_pred ----HHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHH
Confidence 1122345588999999999999999999887889999999999999999852 234567789999999999999
Q ss_pred CCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEE
Q 041225 259 GLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVW 338 (658)
Q Consensus 259 G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~ 338 (658)
|+|||++|||.++..+... .. ...+.|++|+|.++++|++|+++++||+.|+++||++|
T Consensus 509 glRvla~A~k~~~~~~~~~--------------------~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~ 567 (917)
T COG0474 509 GLRVLAVAYKKLDRAEKDD--------------------EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVW 567 (917)
T ss_pred HHHHHHHHhccCCcccccc--------------------hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEE
Confidence 9999999999776553210 01 34678999999999999999999999999999999999
Q ss_pred EEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCC
Q 041225 339 VLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFS 418 (658)
Q Consensus 339 i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (658)
|+|||+..||.+||+++|+......
T Consensus 568 MiTGD~~~TA~aIa~~~Gi~~~~~~------------------------------------------------------- 592 (917)
T COG0474 568 MITGDHVETAIAIAKECGIEAEAES------------------------------------------------------- 592 (917)
T ss_pred EECCCCHHHHHHHHHHcCCCCCCCc-------------------------------------------------------
Confidence 9999999999999999997543210
Q ss_pred CCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCc
Q 041225 419 DVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGA 498 (658)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ 498 (658)
.++++|.++....++++ ...+.... |++|++|.||..+|+.|+++ ++.|+|+|||.
T Consensus 593 -----------------~~vi~G~el~~l~~~el----~~~~~~~~--VfARvsP~qK~~IV~~lq~~-g~vVamtGDGv 648 (917)
T COG0474 593 -----------------ALVIDGAELDALSDEEL----AELVEELS--VFARVSPEQKARIVEALQKS-GHVVAMTGDGV 648 (917)
T ss_pred -----------------eeEeehHHhhhcCHHHH----HHHhhhCc--EEEEcCHHHHHHHHHHHHhC-CCEEEEeCCCc
Confidence 34566666655555432 23333323 99999999999999999999 78999999999
Q ss_pred CChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 041225 499 NDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGF 577 (658)
Q Consensus 499 NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 577 (658)
||+||||.||+||||.+++.+.+|++||+++.++++.....++ |||+.|.|+++++.|.+++|+..+++++++.+++.+
T Consensus 649 NDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~ 728 (917)
T COG0474 649 NDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF 728 (917)
T ss_pred hhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999997777777999999999999998888766 999999999999999999999999999999988765
Q ss_pred ccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCC
Q 041225 578 STTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYP 619 (658)
Q Consensus 578 s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p 619 (658)
..|+.+++++|+|++++++|++++++++ ++...+.+|
T Consensus 729 --~~p~~~~qll~inll~d~~pa~~L~~~~---~~~~~m~~~ 765 (917)
T COG0474 729 --FLPLTPLQLLWINLLTDSLPALALGVED---PESDVMKRP 765 (917)
T ss_pred --cccHHHHHHHHHHHHHhhhhhheeecCC---CcccccccC
Confidence 6899999999999999999999999877 344455555
No 6
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-68 Score=556.33 Aligned_cols=500 Identities=24% Similarity=0.275 Sum_probs=385.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++++||++.++|+||.+++||||||||||+|+|++.++++.+..+... ........+|.+.+++..+..-..
T Consensus 314 akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~-----~~f~~tg~ty~~~g~v~~~~~~~~- 387 (972)
T KOG0202|consen 314 AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV-----DEFNPTGTTYSPEGEVFKDGLYEK- 387 (972)
T ss_pred HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc-----cccccCCceeCCCCceEecCcccc-
Confidence 57889999999999999999999999999999999999999988655432 001112233444443333221000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
...-....+++++.+.++||......++ .+.++..| .|+|.||..++.++|+.-.......
T Consensus 388 ----~~~~~~~~l~~l~~i~~lCNda~v~~~~-------------~~~~~~~G-~pTE~AL~vlaeKm~l~~~~~~~~s- 448 (972)
T KOG0202|consen 388 ----DKAGDNDLLQELAEICALCNDATVEYND-------------ADCYEKVG-EPTEGALIVLAEKMGLPGTRSTNLS- 448 (972)
T ss_pred ----ccccccHHHHHHHHHHHhhhhhhhhcCc-------------hhhHHhcC-CchHHHHHHHHHHcCCCcchhhccc-
Confidence 0112344578899999999987764332 13455555 9999999999999997653311100
Q ss_pred EEEeCC-----cEEEEEEEEeeCCCCCCCeeEEEEEcCCCc--EEEEEeCCchHhHHhhhcCc--------cccHHHHHH
Q 041225 183 VIDING-----EGLRLDVLGLHEFDSVRKRMSVVIRFPDNS--VKVLVKGADSSMFNILAKDS--------KRNDLIRHI 247 (658)
Q Consensus 183 ~~~~~g-----~~~~~~il~~~~F~s~rk~msviv~~~~~~--~~l~~KGa~e~i~~~~~~~~--------~~~~~~~~~ 247 (658)
..+ .+ -...++-.+.+||+|+||+|||.+.++.+. +.+|+|||+|.|+++|+... ..++..++.
T Consensus 449 ~~~-~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~ 527 (972)
T KOG0202|consen 449 NEE-ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRET 527 (972)
T ss_pred ccc-cccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHH
Confidence 001 11 012356668999999999999999988765 89999999999999996432 356788999
Q ss_pred HHHHHHHHhhcCCeEEEEEEecCCH-HHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHH
Q 041225 248 TQSHLSEYSSQGLRTLVVASRDLAD-EELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEA 326 (658)
Q Consensus 248 ~~~~~~~~~~~G~r~l~~a~k~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~a 326 (658)
+.+...+|+..|+|+|++|++..+. .... ........+...|.|+||+|.+|+.|++|++++++
T Consensus 528 il~~~~~~g~~gLRvLalA~~~~~~~~~~~---------------~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~a 592 (972)
T KOG0202|consen 528 ILANVYEMGSEGLRVLALASKDSPGQVPDD---------------QDLNDTSNRATAESDLTFVGLVGILDPPRPEVADA 592 (972)
T ss_pred HHHHHHHHhhccceEEEEEccCCcccChhh---------------hhhcccccccccccceEEEEEeeccCCCchhHHHH
Confidence 9999999999999999999998764 1100 00000113445788999999999999999999999
Q ss_pred HHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHH
Q 041225 327 IEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEI 406 (658)
Q Consensus 327 I~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (658)
|+.|+++||+|.|+|||+..||.+||+++|+...+..+ .
T Consensus 593 i~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~-~---------------------------------------- 631 (972)
T KOG0202|consen 593 IELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDV-S---------------------------------------- 631 (972)
T ss_pred HHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccc-c----------------------------------------
Confidence 99999999999999999999999999999986653321 0
Q ss_pred HHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc
Q 041225 407 EYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR 486 (658)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~ 486 (658)
....+|.++...-..++.. .. ....+++|+.|.+|..+|+.|++.
T Consensus 632 -----------------------------~~~~TG~efD~ls~~~~~~----~~--~~~~vFaR~~P~HK~kIVeaLq~~ 676 (972)
T KOG0202|consen 632 -----------------------------SMALTGSEFDDLSDEELDD----AV--RRVLVFARAEPQHKLKIVEALQSR 676 (972)
T ss_pred -----------------------------ccccchhhhhcCCHHHHHH----Hh--hcceEEEecCchhHHHHHHHHHhc
Confidence 0012222222211111111 01 125689999999999999999998
Q ss_pred CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHH
Q 041225 487 TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFV 565 (658)
Q Consensus 487 ~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~ 565 (658)
++.|+|.|||.||.|+||.||+||||.-++.+.+|+|||+|+.|++|..++-.+ |||.+|.|+++++.|.+..|+...
T Consensus 677 -geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev 755 (972)
T KOG0202|consen 677 -GEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEV 755 (972)
T ss_pred -CCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHH
Confidence 789999999999999999999999994477788999999999999999999998 899999999999999999999999
Q ss_pred HHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccccchHHHHHHHHHHHHHhhc
Q 041225 566 LMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLWPSDIQIAREAEVLRKG 645 (658)
Q Consensus 566 ~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~ 645 (658)
.+.|+...+ ..+.|++++|++|+|++++.+|+-++|+ .+++.+.+.+.|.-.+.+-..|..++...+.+...+-+
T Consensus 756 ~~I~l~aa~---~~p~pL~pvQiLWiNlvtDG~PA~aLG~--ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~ 830 (972)
T KOG0202|consen 756 VLIFLTAAF---GIPEPLIPVQILWINLVTDGPPATALGF--EPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVA 830 (972)
T ss_pred HHHHHHHHh---CCCCcccchhhheeeeeccCCchhhcCC--CCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeee
Confidence 888888777 5678999999999999999999999997 45577788888888888888888999988888766544
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.1e-64 Score=585.03 Aligned_cols=504 Identities=20% Similarity=0.279 Sum_probs=357.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCc-ccCCch----hhH--HHHHHH-HHhhhccccccc
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGK-NYGNSL----LLA--QQVSAA-AVRRWKLKSEIS 94 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~-~~~~~~----~~~--~~~~~~-~~~~~~~~~~~~ 94 (658)
.+++++||+++++|+||++++||+|||||||+|+|+|.++|+++. .+.... ..+ ...... ....+.......
T Consensus 341 ak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 420 (1053)
T TIGR01523 341 SKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEA 420 (1053)
T ss_pred HhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccc
Confidence 456899999999999999999999999999999999999998752 111000 000 000000 000000000000
Q ss_pred cChHHHHHHhhcc-----Cc-chhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHH
Q 041225 95 VDSKLMELLSKDL-----VG-DERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAAS 168 (658)
Q Consensus 95 ~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~ 168 (658)
.+++..+...... .. ......++++.++++||+.....++. .+.+... ++|+|.||++++.
T Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~------------~~~~~~~-GdptE~ALl~~a~ 487 (1053)
T TIGR01523 421 ADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDA------------TDCWKAH-GDPTEIAIHVFAK 487 (1053)
T ss_pred ccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCC------------CCceeeC-cCccHHHHHHHHH
Confidence 0000000000000 00 01134567889999999876532210 1122333 4999999999999
Q ss_pred HcCcEEEEE---------cC-CeEEEE---eCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCC-cEEEEEeCCchHhHHhh
Q 041225 169 AYGYTLFER---------TS-GHIVID---INGEGLRLDVLGLHEFDSVRKRMSVVIRFPDN-SVKVLVKGADSSMFNIL 234 (658)
Q Consensus 169 ~~g~~~~~~---------~~-~~~~~~---~~g~~~~~~il~~~~F~s~rk~msviv~~~~~-~~~l~~KGa~e~i~~~~ 234 (658)
+.|+..... .+ ....+. ..+....+++++.+||+|+|||||++++.+++ .+++|+|||||.|+++|
T Consensus 488 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c 567 (1053)
T TIGR01523 488 KFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECC 567 (1053)
T ss_pred HcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhh
Confidence 998742100 00 000011 11223468899999999999999999998755 58899999999999999
Q ss_pred hcCc--------cccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhcc
Q 041225 235 AKDS--------KRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECD 306 (658)
Q Consensus 235 ~~~~--------~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~D 306 (658)
+... ..++..++.+.+.+++|+.+|+|||++|||.++.++...+ .+.. ...+ ...+|.|
T Consensus 568 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~~~--------~~~~e~~ 634 (1053)
T TIGR01523 568 SSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ETLN--------RATAESD 634 (1053)
T ss_pred hHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cccc--------hhhhccC
Confidence 8532 2456678889999999999999999999999976543211 0000 0000 1236789
Q ss_pred ceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhc
Q 041225 307 LTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARY 386 (658)
Q Consensus 307 gTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~ 386 (658)
++|+|.++++|+++++++++|++|+++||++||+|||+..+|..+|+++|+...+.. .. ..
T Consensus 635 L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~--~~-~~---------------- 695 (1053)
T TIGR01523 635 LEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI--HD-RD---------------- 695 (1053)
T ss_pred CEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc--cc-cc----------------
Confidence 999999999999999999999999999999999999999999999999999754210 00 00
Q ss_pred CcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCee
Q 041225 387 GVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVV 466 (658)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~ 466 (658)
......+++|.++.....+.+.+ ... ...
T Consensus 696 ---------------------------------------------~~~~~~vitG~~l~~l~~~~l~~----~~~--~~~ 724 (1053)
T TIGR01523 696 ---------------------------------------------EIMDSMVMTGSQFDALSDEEVDD----LKA--LCL 724 (1053)
T ss_pred ---------------------------------------------ccccceeeehHHhhhcCHHHHHH----Hhh--cCe
Confidence 00001345665554433322221 111 246
Q ss_pred EEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhh
Q 041225 467 LCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHW 545 (658)
Q Consensus 467 i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~ 545 (658)
+++|++|.||..+|+.+++. ++.|+|+|||.||+|||+.||+||||+.++.+.++++||+++.++++.....++ |||.
T Consensus 725 V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~ 803 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRR 803 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHH
Confidence 89999999999999999998 689999999999999999999999994356666999999999998888777666 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--cchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcccc
Q 041225 546 NYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTT--SALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYV 623 (658)
Q Consensus 546 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~ 623 (658)
+|+|+++++.|.++.|+..+++.+++.++..++|. .|+++++++|+|++++.+|+++++. .+.+++.+.+.|..+.
T Consensus 804 ~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~--e~~~~~~m~~~Pr~~~ 881 (1053)
T TIGR01523 804 MFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGL--EKAAPDLMDRLPHDNE 881 (1053)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhcc--CCCChhHHhcCCCCCC
Confidence 99999999999999999999999999988777665 5888999999999999999999987 3445666666666554
Q ss_pred cc
Q 041225 624 VQ 625 (658)
Q Consensus 624 ~~ 625 (658)
..
T Consensus 882 ~~ 883 (1053)
T TIGR01523 882 VG 883 (1053)
T ss_pred cc
Confidence 44
No 8
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-66 Score=539.48 Aligned_cols=473 Identities=25% Similarity=0.329 Sum_probs=368.4
Q ss_pred cccccCCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhcccccccc
Q 041225 16 KHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISV 95 (658)
Q Consensus 16 ~~~~~~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (658)
++|+++ +.|||.+++||+||..++||+|||||||+|+|+|++.|+++..+.... +++...
T Consensus 414 kkMmkD----~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~----------------~~~~~l 473 (1034)
T KOG0204|consen 414 KKMMKD----NNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNS----------------PKSSNL 473 (1034)
T ss_pred HHHhcc----hhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccC----------------cccccC
Confidence 456554 489999999999999999999999999999999999999887765211 000123
Q ss_pred ChHHHHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEE
Q 041225 96 DSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLF 175 (658)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~ 175 (658)
++++.+ .++.+.+...+-....++ ..+...-+.++|+|.||+.|+..+|.++.
T Consensus 474 ~~~~~~---------------ll~~gI~~Nt~g~v~~~~------------~~g~~~~~~GspTE~AlL~f~~~LG~~~~ 526 (1034)
T KOG0204|consen 474 PPSLLD---------------LLLQGIAQNTTGSVVKPE------------KGGEQPEQLGSPTECALLGFGLKLGMDFQ 526 (1034)
T ss_pred CHHHHH---------------HHHHHHhhcCCCeEEecC------------CCCcCccccCCHHHHHHHHHHHHhCcchH
Confidence 333332 233444443332222211 11223334459999999999999998664
Q ss_pred EEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCcc-------ccHHHHHHH
Q 041225 176 ERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSK-------RNDLIRHIT 248 (658)
Q Consensus 176 ~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~-------~~~~~~~~~ 248 (658)
. .+.+.++++++||+|.||||+++++.+++..++|+|||+|.++..|+.... .++..+..+
T Consensus 527 ~------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~ 594 (1034)
T KOG0204|consen 527 D------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSF 594 (1034)
T ss_pred h------------hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHH
Confidence 3 224567889999999999999999998877239999999999999987543 345566789
Q ss_pred HHHHHHHhhcCCeEEEEEEecCCHH--HHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHH
Q 041225 249 QSHLSEYSSQGLRTLVVASRDLADE--ELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEA 326 (658)
Q Consensus 249 ~~~~~~~~~~G~r~l~~a~k~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~a 326 (658)
+..++.|+.+|+|++|+|||++... +.+.|.. ....+.|+|+++.+|++|++||++++|
T Consensus 595 ~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-------------------~~~~~~~lt~laivGIkDPvRPgV~~A 655 (1034)
T KOG0204|consen 595 KDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-------------------EELPEGGLTLLAIVGIKDPVRPGVPEA 655 (1034)
T ss_pred HHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------------------cccCCCCeEEEEEeeccCCCCCCcHHH
Confidence 9999999999999999999996443 1111211 112457899999999999999999999
Q ss_pred HHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHH
Q 041225 327 IEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEI 406 (658)
Q Consensus 327 I~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (658)
|+.|+++||.|.|+|||+..||++||.+|||..+++..+..+|.+
T Consensus 656 V~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~e----------------------------------- 700 (1034)
T KOG0204|consen 656 VQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKE----------------------------------- 700 (1034)
T ss_pred HHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchh-----------------------------------
Confidence 999999999999999999999999999999999877655555422
Q ss_pred HHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc
Q 041225 407 EYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR 486 (658)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~ 486 (658)
+.+.-++++.+.. .+..+.+|.+|.+|...|+.|+++
T Consensus 701 -------------------------------------Fr~~s~ee~~~i~------pkl~VlARSSP~DK~lLVk~L~~~ 737 (1034)
T KOG0204|consen 701 -------------------------------------FRELSQEERDKIW------PKLRVLARSSPNDKHLLVKGLIKQ 737 (1034)
T ss_pred -------------------------------------hhhcCHHHHHhhh------hhheeeecCCCchHHHHHHHHHhc
Confidence 1111111111100 124588999999999999999988
Q ss_pred CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHH
Q 041225 487 TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFV 565 (658)
Q Consensus 487 ~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~ 565 (658)
++.|++.|||.||.|+|+.||+|+||.-.+.+.||++||+|+.|++|.+++..+ +||..|.+++|+++|.+.-|+...
T Consensus 738 -g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAl 816 (1034)
T KOG0204|consen 738 -GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVAL 816 (1034)
T ss_pred -CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEee
Confidence 789999999999999999999999995555566999999999999999999876 999999999999999999999999
Q ss_pred HHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccc---cccchH-----HHHHHHH
Q 041225 566 LMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVV---QQYLWP-----SDIQIAR 637 (658)
Q Consensus 566 ~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~---~~~~~~-----~~~~~~~ 637 (658)
++.|..... ++.+|+.+.|++|.|++++.+.++++|. ++..++.+.+.|.=-.. ....|+ ++||+++
T Consensus 817 iv~fv~A~~---~~dsPLtAVQlLWVNLIMDTLgALALAT--epPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~v 891 (1034)
T KOG0204|consen 817 IVNFVSACA---TGDSPLTAVQLLWVNLIMDTLGALALAT--EPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIV 891 (1034)
T ss_pred hhhhhhhhh---cCCccHHHHHHHHHHHHHHHHHHHHhcc--CCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 888888777 6779999999999999999999999975 33455566677732222 124554 5899999
Q ss_pred HHHHHhhcccccc
Q 041225 638 EAEVLRKGSNYLA 650 (658)
Q Consensus 638 ~~~~~~~~~~~~~ 650 (658)
...+...|-..+.
T Consensus 892 l~iL~F~G~~if~ 904 (1034)
T KOG0204|consen 892 LFILNFAGKSIFG 904 (1034)
T ss_pred HHHHHhcchhhhc
Confidence 9999998888773
No 9
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2e-63 Score=573.20 Aligned_cols=481 Identities=23% Similarity=0.287 Sum_probs=352.1
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++++||+++++|+||++++||||||||||+|+|+|.+++..+..+.... ... .....+.+.+....+.
T Consensus 271 ~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~----- 340 (917)
T TIGR01116 271 AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN-EFC----VTGTTYAPEGGVIKDD----- 340 (917)
T ss_pred HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc-eEE----ecCCccCCCccccccC-----
Confidence 346899999999999999999999999999999999999998764321100 000 0000011100000000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.............++.++++||++....++. .+.++.. ++|+|.||++++.+.|+..........
T Consensus 341 --~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~------------~~~~~~~-gdp~E~ALl~~~~~~g~~~~~~~~~~~ 405 (917)
T TIGR01116 341 --GPVAGGQDAGLEELATIAALCNDSSLDFNER------------KGVYEKV-GEATEAALKVLVEKMGLPATKNGVSSK 405 (917)
T ss_pred --CcccccchHHHHHHHHHHHhcCCCeeecccc------------CCceeec-cChhHHHHHHHHHHcCCCchhcccccc
Confidence 0000011234567888999999876542221 0112223 499999999999999987654433322
Q ss_pred EEEeCC----cEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCc-------cccHHHHHHHHHH
Q 041225 183 VIDING----EGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDS-------KRNDLIRHITQSH 251 (658)
Q Consensus 183 ~~~~~g----~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~-------~~~~~~~~~~~~~ 251 (658)
.....| ....+++++.+||+|+|||||++++.. +.+.+|+|||||.|+++|++.. +.++..++.+.++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~ 484 (917)
T TIGR01116 406 RRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSV 484 (917)
T ss_pred cccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHH
Confidence 222222 124578999999999999999999964 6688999999999999997532 2345678889999
Q ss_pred HHHHhh-cCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHH
Q 041225 252 LSEYSS-QGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEAL 330 (658)
Q Consensus 252 ~~~~~~-~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l 330 (658)
+++|+. +|+||+++|||.++.++... . ..+. .....++.|++|+|.++++|+++++++++|++|
T Consensus 485 ~~~~a~~~GlRvl~~A~k~~~~~~~~~-~---------~~~~-----~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l 549 (917)
T TIGR01116 485 IKEMGTTKALRCLALAFKDIPDPREED-L---------LSDP-----ANFEAIESDLTFIGVVGMLDPPRPEVADAIEKC 549 (917)
T ss_pred HHHHHhhcCCeEEEEEEEECCcccccc-c---------cccc-----hhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHH
Confidence 999999 99999999999987643110 0 0000 112346789999999999999999999999999
Q ss_pred HhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHH
Q 041225 331 RQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLA 410 (658)
Q Consensus 331 ~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (658)
+++||+++|+|||+..+|..+|+++|+..++..+..
T Consensus 550 ~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~-------------------------------------------- 585 (917)
T TIGR01116 550 RTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTF-------------------------------------------- 585 (917)
T ss_pred HHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccc--------------------------------------------
Confidence 999999999999999999999999999765432110
Q ss_pred hhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCe
Q 041225 411 ISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDM 490 (658)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~ 490 (658)
..++|.++.....+.. .. ...+..+++|++|.+|..+++.+++. ++.
T Consensus 586 --------------------------~~~~g~~l~~~~~~~~----~~--~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~ 632 (917)
T TIGR01116 586 --------------------------KSFTGREFDEMGPAKQ----RA--ACRSAVLFSRVEPSHKSELVELLQEQ-GEI 632 (917)
T ss_pred --------------------------eeeeHHHHhhCCHHHH----HH--hhhcCeEEEecCHHHHHHHHHHHHhc-CCe
Confidence 0111111111100000 01 11235799999999999999999976 689
Q ss_pred EEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 491 TLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLF 569 (658)
Q Consensus 491 v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~ 569 (658)
|+|+|||.||++||+.||+|||| +++.+.++++||+++.++++...+.++ |||.+|+|+++++.|.+++|+..+++++
T Consensus 633 va~iGDG~ND~~alk~AdVGia~-g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~ 711 (917)
T TIGR01116 633 VAMTGDGVNDAPALKKADIGIAM-GSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIF 711 (917)
T ss_pred EEEecCCcchHHHHHhCCeeEEC-CCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 99999999999999999999999 466666899999999997776666544 9999999999999999999999999999
Q ss_pred HHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcccccccc
Q 041225 570 WYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQY 627 (658)
Q Consensus 570 ~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~ 627 (658)
++.++ ..+.|+++++++|+|++++.+|+++++.... +++.+.+.|..+...-.
T Consensus 712 ~~~~~---~~~~pl~~~qll~inli~d~lp~~~l~~~~~--~~~~m~~pP~~~~~~l~ 764 (917)
T TIGR01116 712 LTAAL---GIPEGLIPVQLLWVNLVTDGLPATALGFNPP--DKDIMWKPPRRPDEPLI 764 (917)
T ss_pred HHHHH---cCCchHHHHHHHHHHHHHHHHHHHHHhcCCc--chhHhcCCCCCCCCCcc
Confidence 88776 3457999999999999999999999987544 46666677766655433
No 10
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.6e-62 Score=569.21 Aligned_cols=477 Identities=19% Similarity=0.214 Sum_probs=355.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++++||+++++|+||++++||||||||||+|+|+|.++++++..+..+... .....
T Consensus 326 ~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~------------~~~~~---------- 383 (997)
T TIGR01106 326 ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE------------DQSGV---------- 383 (997)
T ss_pred HHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCcc------------CCCCc----------
Confidence 46689999999999999999999999999999999999999887655321100 00000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.........+.++.++++||++.+..+.... .... .+..++|+|.||++++...+...
T Consensus 384 ----~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~---------~~~~-~~~~gdp~E~ALl~~a~~~~~~~-------- 441 (997)
T TIGR01106 384 ----SFDKSSATWLALSRIAGLCNRAVFKAGQENV---------PILK-RAVAGDASESALLKCIELCLGSV-------- 441 (997)
T ss_pred ----cCCcccHHHHHHHHHHHHcCCCeeccccCCC---------cccc-cccCcChHHHHHHHHHHHhCCCH--------
Confidence 0011112345678899999987654221100 0001 13345999999999998654321
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcC---CCcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHH
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFP---DNSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLS 253 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~---~~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~ 253 (658)
.+....+++++.+||+|+||||+++++.. ++.+++|+|||||.|+++|+... ..++..++.+.+.++
T Consensus 442 ----~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~ 517 (997)
T TIGR01106 442 ----MEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYL 517 (997)
T ss_pred ----HHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHH
Confidence 11233567788999999999999998743 24688999999999999997531 235667888999999
Q ss_pred HHhhcCCeEEEEEEecCCHHHHHH-HHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHh
Q 041225 254 EYSSQGLRTLVVASRDLADEELKQ-WQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQ 332 (658)
Q Consensus 254 ~~~~~G~r~l~~a~k~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~ 332 (658)
+++.+|+||+++|||.++.++++. |... .+ .....+.|++|+|.++++|+++++++++|++|++
T Consensus 518 ~~a~~GlRvla~A~k~l~~~~~~~~~~~~----------~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~ 582 (997)
T TIGR01106 518 ELGGLGERVLGFCHLYLPDEQFPEGFQFD----------TD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRS 582 (997)
T ss_pred HHHhcCCEEEEEEEeecCccccccccccc----------ch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHH
Confidence 999999999999999997654321 1100 00 0123478999999999999999999999999999
Q ss_pred cCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhh
Q 041225 333 AGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAIS 412 (658)
Q Consensus 333 ~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (658)
+||+++|+|||++.+|.++|+++|++..+... .+++.+ .....
T Consensus 583 ~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~-------~~~i~~-------~~~~~----------------------- 625 (997)
T TIGR01106 583 AGIKVIMVTGDHPITAKAIAKGVGIISEGNET-------VEDIAA-------RLNIP----------------------- 625 (997)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCCCCccc-------hhhhhh-------hcccc-----------------------
Confidence 99999999999999999999999998654321 000000 00000
Q ss_pred cCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEE
Q 041225 413 NDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTL 492 (658)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~ 492 (658)
... .........+++|.++.....+++ ...+..+...|++|++|.||..+|+.+++. ++.|+
T Consensus 626 ----~~~---------~~~~~~~~~vi~G~~l~~l~~~el----~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~ 687 (997)
T TIGR01106 626 ----VSQ---------VNPRDAKACVVHGSDLKDMTSEQL----DEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVA 687 (997)
T ss_pred ----ccc---------cccccccceEEEhHHhhhCCHHHH----HHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEE
Confidence 000 000011125677777765544332 233333345699999999999999999987 67999
Q ss_pred EEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 493 AIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWY 571 (658)
Q Consensus 493 aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~ 571 (658)
|+|||.||+|||+.||+||||+.++.+.++++||+++.++++...+.++ |||.+|.|+++++.|.++.|+..+++.+++
T Consensus 688 ~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~ 767 (997)
T TIGR01106 688 VTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIF 767 (997)
T ss_pred EECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999999999999999994355556899999999999998888665 999999999999999999999999999998
Q ss_pred HHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccc
Q 041225 572 ILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622 (658)
Q Consensus 572 ~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y 622 (658)
.++ ..+.|+++++++|+|++++.+|+++++. .+.+++.+.+.|.-.
T Consensus 768 ~~~---~~~~pl~~~qlL~inli~d~lp~~al~~--e~~~~~~m~~~P~~~ 813 (997)
T TIGR01106 768 IIA---NIPLPLGTITILCIDLGTDMVPAISLAY--EKAESDIMKRQPRNP 813 (997)
T ss_pred HHH---cCcchhHHHHHHHHHHHHHHHHHHHHhc--CCCCcccccCCCcCC
Confidence 887 4557899999999999999999999987 445666777777643
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=3.6e-61 Score=556.65 Aligned_cols=434 Identities=25% Similarity=0.321 Sum_probs=335.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++++||+++++|+||++++||||||||||+|+|+|.+++..+..+.... ..
T Consensus 358 ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-------------------------~~-- 410 (941)
T TIGR01517 358 MKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD-------------------------VL-- 410 (941)
T ss_pred HhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc-------------------------cc--
Confidence 467899999999999999999999999999999999999987664332110 00
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
...+....+++...++||+..+...+ . ....+..++|+|.|+++++...|.....
T Consensus 411 ------~~~~~~~~~~l~~~~~~~s~~~~~~~------------~-~~~~~~~g~p~e~All~~~~~~~~~~~~------ 465 (941)
T TIGR01517 411 ------RNVPKHVRNILVEGISLNSSSEEVVD------------R-GGKRAFIGSKTECALLGFLLLLGRDYQE------ 465 (941)
T ss_pred ------ccCCHHHHHHHHHHHHhCCCCccccC------------C-CCccccCCCccHHHHHHHHHHcCCCHHH------
Confidence 00011234455555566544332110 0 1112345699999999999887643210
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCc-------cccHHHHHHHHHHHHHH
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDS-------KRNDLIRHITQSHLSEY 255 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~-------~~~~~~~~~~~~~~~~~ 255 (658)
....+++++.+||+|+||||+++++.+++.+++|+|||||.|+++|+... ..++ .++.+.+.++++
T Consensus 466 ------~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~ 538 (941)
T TIGR01517 466 ------VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPL 538 (941)
T ss_pred ------HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHH
Confidence 11245678899999999999999998888899999999999999997531 1223 567888999999
Q ss_pred hhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCC
Q 041225 256 SSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGI 335 (658)
Q Consensus 256 ~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI 335 (658)
+.+|+|++++|||.++.++.+.| ...|.|++++|.++++|++|++++++|++|+++||
T Consensus 539 a~~G~Rvl~~A~~~~~~~~~~~~----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI 596 (941)
T TIGR01517 539 ASDALRTICLAYRDFAPEEFPRK----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGI 596 (941)
T ss_pred HhcCCEEEEEEEEecCccccccc----------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCC
Confidence 99999999999999875543211 01357899999999999999999999999999999
Q ss_pred eEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCC
Q 041225 336 KVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDA 415 (658)
Q Consensus 336 ~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (658)
+++|+|||+..+|..+|+++|+...+..+
T Consensus 597 ~v~miTGD~~~tA~~iA~~~GI~~~~~~v--------------------------------------------------- 625 (941)
T TIGR01517 597 TVRMVTGDNIDTAKAIARNCGILTFGGLA--------------------------------------------------- 625 (941)
T ss_pred EEEEECCCChHHHHHHHHHcCCCCCCceE---------------------------------------------------
Confidence 99999999999999999999997654322
Q ss_pred CCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEc
Q 041225 416 KFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIG 495 (658)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiG 495 (658)
++|+++.....+++.. ++. +..+++|++|.||..+|+.+++. ++.|+|+|
T Consensus 626 -----------------------i~G~~~~~l~~~el~~----~i~--~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~G 675 (941)
T TIGR01517 626 -----------------------MEGKEFRRLVYEEMDP----ILP--KLRVLARSSPLDKQLLVLMLKDM-GEVVAVTG 675 (941)
T ss_pred -----------------------eeHHHhhhCCHHHHHH----Hhc--cCeEEEECCHHHHHHHHHHHHHC-CCEEEEEC
Confidence 1222221111111111 111 24689999999999999999997 67999999
Q ss_pred CCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041225 496 DGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILF 574 (658)
Q Consensus 496 Dg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 574 (658)
||.||+|||+.||+||||+.++.+.++++||+++.++++.....++ +||.+|.|+++++.|.+++|++.+++.+++.++
T Consensus 676 DGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~ 755 (941)
T TIGR01517 676 DGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCI 755 (941)
T ss_pred CCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999994366667999999999999988888666 999999999999999999999999998888777
Q ss_pred hccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccc
Q 041225 575 TGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVV 624 (658)
Q Consensus 575 ~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~ 624 (658)
. ++.|+++++++|+|++++.+|+++++. +.+.+.+++.|..++.
T Consensus 756 ~---~~~pl~~~qil~inl~~d~~~al~l~~---e~~~~~lm~~~P~~~~ 799 (941)
T TIGR01517 756 S---STSPLTAVQLLWVNLIMDTLAALALAT---EPPTEALLDRKPIGRN 799 (941)
T ss_pred h---ccccHHHHHHHHHHHHHHHhhHHHHcc---CCccHHHHhCCCCCCC
Confidence 4 467999999999999999999999973 3455666766666544
No 12
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=7.5e-59 Score=542.16 Aligned_cols=485 Identities=23% Similarity=0.292 Sum_probs=339.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++|+||++.++|+||+|+++|||||||||+|+|+|.+++..+....... . ..
T Consensus 430 ~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~------------------~--~~------ 483 (1054)
T TIGR01657 430 KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLK------------------I--VT------ 483 (1054)
T ss_pred HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccc------------------c--cc------
Confidence 467899999999999999999999999999999999999986543111000 0 00
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe-
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH- 181 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~- 181 (658)
.........++.++++||++.... + +. .++|.|.|+++++ |+.+.......
T Consensus 484 ------~~~~~~~~~~~~~~a~C~~~~~~~----------------~--~~-~Gdp~E~al~~~~---~~~~~~~~~~~~ 535 (1054)
T TIGR01657 484 ------EDSSLKPSITHKALATCHSLTKLE----------------G--KL-VGDPLDKKMFEAT---GWTLEEDDESAE 535 (1054)
T ss_pred ------cccccCchHHHHHHHhCCeeEEEC----------------C--EE-ecCHHHHHHHHhC---CCEEECCCCccc
Confidence 000012234667899999886531 1 22 3599999999975 55543211100
Q ss_pred -----EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCC-CcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHH
Q 041225 182 -----IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPD-NSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEY 255 (658)
Q Consensus 182 -----~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~-~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (658)
..+...+....+++++.+||+|++||||||++.++ +.+++|+|||||.|+++|++.. .++.+.+.++++
T Consensus 536 ~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~-----~p~~~~~~~~~~ 610 (1054)
T TIGR01657 536 PTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET-----VPSDYQEVLKSY 610 (1054)
T ss_pred ccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC-----CChhHHHHHHHH
Confidence 00111222357899999999999999999999865 5678999999999999999642 467788899999
Q ss_pred hhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCC
Q 041225 256 SSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGI 335 (658)
Q Consensus 256 ~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI 335 (658)
+.+|+|||++|||.+++.+..++.+ .....+|.|++|+|.++++|+++++++++|++|+++||
T Consensus 611 a~~G~RVLalA~k~l~~~~~~~~~~-----------------~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi 673 (1054)
T TIGR01657 611 TREGYRVLALAYKELPKLTLQKAQD-----------------LSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASI 673 (1054)
T ss_pred HhcCCEEEEEEEeecCccchhhhhh-----------------ccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCC
Confidence 9999999999999997433222111 01124678999999999999999999999999999999
Q ss_pred eEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCC
Q 041225 336 KVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDA 415 (658)
Q Consensus 336 ~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (658)
+++|+|||++.||..+|+++|++.+++.++..+..+.+... .....+...+.... ....
T Consensus 674 ~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~----------------~~~~~~~~~~~~~~-----~~~~ 732 (1054)
T TIGR01657 674 RTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGK----------------PNQIKFEVIDSIPF-----ASTQ 732 (1054)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCC----------------CceEEEEecCcccc-----cccc
Confidence 99999999999999999999999876665554321100000 00000000000000 0000
Q ss_pred CCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEc
Q 041225 416 KFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIG 495 (658)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiG 495 (658)
.....................++++|+++....+. ..+.+..++.. ..|++|++|.||..+|+.+++. ++.|+|+|
T Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~--~~VfAR~sP~qK~~iV~~lq~~-g~~V~m~G 808 (1054)
T TIGR01657 733 VEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSH--TTVFARMAPDQKETLVELLQKL-DYTVGMCG 808 (1054)
T ss_pred ccccCcccccchhhhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhc--CeEEEecCHHHHHHHHHHHHhC-CCeEEEEe
Confidence 00000000000001112234578889887664321 11223333333 4599999999999999999998 68999999
Q ss_pred CCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041225 496 DGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILF 574 (658)
Q Consensus 496 Dg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 574 (658)
||.||++|||.||+||||++++ |..+||+++.+.++.....++ +||.++.++.+++.|.+..++...+..++..+
T Consensus 809 DG~ND~~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~- 884 (1054)
T TIGR01657 809 DGANDCGALKQADVGISLSEAE---ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYL- 884 (1054)
T ss_pred CChHHHHHHHhcCcceeecccc---ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999995443 668999999999998888776 99999999999999988888766555433222
Q ss_pred hccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCC
Q 041225 575 TGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYP 619 (658)
Q Consensus 575 ~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p 619 (658)
...+++++|++|+|++++.+|+++++.. .+.+.+++.|
T Consensus 885 ----~~~~l~~~Q~l~i~li~~~~~~l~l~~~---~p~~~l~~~~ 922 (1054)
T TIGR01657 885 ----IGSNLGDGQFLTIDLLLIFPVALLMSRN---KPLKKLSKER 922 (1054)
T ss_pred ----ccCcCccHHHHHHHHHHHHHHHHHHHcC---CchhhcCCCC
Confidence 2367889999999999999999999642 2344455444
No 13
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2.4e-57 Score=521.69 Aligned_cols=446 Identities=24% Similarity=0.312 Sum_probs=336.8
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++++||+++++|+||++++||||||||||+|+|+|.+++..+..+.... ...+.+.++...+.+.
T Consensus 306 ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~----------~~~~~~~~~~~~~~~~--- 372 (884)
T TIGR01522 306 SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLN----------AVSLNQFGEVIVDGDV--- 372 (884)
T ss_pred hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeecc----------CCccCCCCcccccccc---
Confidence 567899999999999999999999999999999999999987654321000 0000000010000000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.....++...+++.+.++||+......+ + .. .++|+|.|+++++...|+..
T Consensus 373 ----~~~~~~~~~~~~l~~~~l~~~~~~~~~~--------------~--~~-~g~p~e~All~~~~~~~~~~-------- 423 (884)
T TIGR01522 373 ----LHGFYTVAVSRILEAGNLCNNAKFRNEA--------------D--TL-LGNPTDVALIELLMKFGLDD-------- 423 (884)
T ss_pred ----cccccCHHHHHHHHHHhhhCCCeecCCC--------------C--Cc-CCChHHHHHHHHHHHcCcHh--------
Confidence 0011123456788889999987542111 1 11 24899999999999877531
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcC-CCcEEEEEeCCchHhHHhhhcCcc-------ccHHHHHHHHHHHHH
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFP-DNSVKVLVKGADSSMFNILAKDSK-------RNDLIRHITQSHLSE 254 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~-~~~~~l~~KGa~e~i~~~~~~~~~-------~~~~~~~~~~~~~~~ 254 (658)
....++.++.+||+|.||||+++++.+ ++.+++|+|||||.|+..|+.... .++..++.+.+.+++
T Consensus 424 ------~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~ 497 (884)
T TIGR01522 424 ------LRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAE 497 (884)
T ss_pred ------HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHH
Confidence 112356778999999999999999875 467899999999999999975321 245567788889999
Q ss_pred HhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcC
Q 041225 255 YSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAG 334 (658)
Q Consensus 255 ~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~G 334 (658)
++.+|+|++++|||.+ +.|++++|.++++|+++++++++|++|+++|
T Consensus 498 ~a~~G~rvl~~A~~~~---------------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~G 544 (884)
T TIGR01522 498 MASAGLRVIAFASGPE---------------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGG 544 (884)
T ss_pred HHhcCCEEEEEEEEcC---------------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCC
Confidence 9999999999999975 2478999999999999999999999999999
Q ss_pred CeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcC
Q 041225 335 IKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISND 414 (658)
Q Consensus 335 I~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (658)
++++|+|||+..+|..+|+++|+......++
T Consensus 545 i~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v------------------------------------------------- 575 (884)
T TIGR01522 545 VRIIMITGDSQETAVSIARRLGMPSKTSQSV------------------------------------------------- 575 (884)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCCCcee-------------------------------------------------
Confidence 9999999999999999999999976533221
Q ss_pred CCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEE
Q 041225 415 AKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAI 494 (658)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~ai 494 (658)
+|.++...-.+++. .++. +..+++|++|.+|..+++.+++. ++.|+|+
T Consensus 576 -------------------------~g~~l~~~~~~~l~----~~~~--~~~Vfar~~P~~K~~iv~~lq~~-g~~v~mv 623 (884)
T TIGR01522 576 -------------------------SGEKLDAMDDQQLS----QIVP--KVAVFARASPEHKMKIVKALQKR-GDVVAMT 623 (884)
T ss_pred -------------------------EhHHhHhCCHHHHH----HHhh--cCeEEEECCHHHHHHHHHHHHHC-CCEEEEE
Confidence 11111110001111 1111 25689999999999999999987 6899999
Q ss_pred cCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 495 GDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYIL 573 (658)
Q Consensus 495 GDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 573 (658)
|||.||+|||+.||+||||+.++.+.++++||+++.++++.....++ +||.+|+|+++++.|.+..|+..+++.+++.+
T Consensus 624 GDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~ 703 (884)
T TIGR01522 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATL 703 (884)
T ss_pred CCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999994345666889999999999988888766 99999999999999999999998877776666
Q ss_pred hhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccccchHHHHHH
Q 041225 574 FTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLWPSDIQI 635 (658)
Q Consensus 574 ~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~ 635 (658)
+ ..+.|+++++++|+|++++.+|+++++. ++.+.+.+.+.|......-..|..+..+
T Consensus 704 ~---~~~~pl~~~qiL~inl~~d~~~a~~l~~--e~~~~~~m~~~P~~~~~~~~~~~~~~~~ 760 (884)
T TIGR01522 704 M---GFPNPLNAMQILWINILMDGPPAQSLGV--EPVDKDVMRKPPRPRNDKILTKDLIKKI 760 (884)
T ss_pred H---cCCCchhHHHHHHHHHHHHhhHHHHhcc--CCCChhHhhCCCCCCCCCccCHHHHHHH
Confidence 5 5568999999999999999999999975 4445566656665544433444333333
No 14
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2.8e-57 Score=518.06 Aligned_cols=417 Identities=19% Similarity=0.227 Sum_probs=320.4
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.+++..+.. .
T Consensus 351 ak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-~-------------------------------- 397 (903)
T PRK15122 351 ARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-K-------------------------------- 397 (903)
T ss_pred HHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-C--------------------------------
Confidence 4678999999999999999999999999999999999987632210 0
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
..+++...++|. .. + ...+||.|.|+++++...|...
T Consensus 398 ------------~~~~l~~a~l~s-~~----~------------------~~~~~p~e~All~~a~~~~~~~-------- 434 (903)
T PRK15122 398 ------------DERVLQLAWLNS-FH----Q------------------SGMKNLMDQAVVAFAEGNPEIV-------- 434 (903)
T ss_pred ------------hHHHHHHHHHhC-CC----C------------------CCCCChHHHHHHHHHHHcCchh--------
Confidence 011222222321 00 0 0135999999999998765421
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHHHHh
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLSEYS 256 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~~~~ 256 (658)
....++.+..+||++.||+|+++++..++.+++++|||+|.|+++|+... ..++..++.+.+.++.++
T Consensus 435 ------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a 508 (903)
T PRK15122 435 ------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYN 508 (903)
T ss_pred ------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHH
Confidence 01235567789999999999999998888899999999999999997532 234556778888899999
Q ss_pred hcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCe
Q 041225 257 SQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIK 336 (658)
Q Consensus 257 ~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~ 336 (658)
.+|+|++++|||.++.++.... .....|.|++++|.++++|++|++++++|++|+++||+
T Consensus 509 ~~G~rvlavA~k~~~~~~~~~~--------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~ 568 (903)
T PRK15122 509 ADGFRVLLVATREIPGGESRAQ--------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVA 568 (903)
T ss_pred hCCCEEEEEEEeccCccccccc--------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCe
Confidence 9999999999999865431100 00113568999999999999999999999999999999
Q ss_pred EEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCC
Q 041225 337 VWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAK 416 (658)
Q Consensus 337 v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (658)
++|+|||+..+|..+|+++|+.. +.+
T Consensus 569 v~miTGD~~~tA~aIA~~lGI~~--~~v---------------------------------------------------- 594 (903)
T PRK15122 569 VKVLTGDNPIVTAKICREVGLEP--GEP---------------------------------------------------- 594 (903)
T ss_pred EEEECCCCHHHHHHHHHHcCCCC--CCc----------------------------------------------------
Confidence 99999999999999999999942 111
Q ss_pred CCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC
Q 041225 417 FSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD 496 (658)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD 496 (658)
++|.++...-.+++ ...+. +..++++++|.||..+|+.|++. ++.|+|+||
T Consensus 595 ----------------------i~G~el~~~~~~el----~~~v~--~~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGD 645 (903)
T PRK15122 595 ----------------------LLGTEIEAMDDAAL----AREVE--ERTVFAKLTPLQKSRVLKALQAN-GHTVGFLGD 645 (903)
T ss_pred ----------------------cchHhhhhCCHHHH----HHHhh--hCCEEEEeCHHHHHHHHHHHHhC-CCEEEEECC
Confidence 11111111111111 11111 14589999999999999999998 689999999
Q ss_pred CcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041225 497 GANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFT 575 (658)
Q Consensus 497 g~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 575 (658)
|.||.|+|+.||+|||| |++.+.+|++||+|+.++++...+.++ +||..|.|+++++.|.+..|+..++..++..++
T Consensus 646 GvNDaPALk~ADVGIAm-g~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~- 723 (903)
T PRK15122 646 GINDAPALRDADVGISV-DSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAF- 723 (903)
T ss_pred CchhHHHHHhCCEEEEe-CcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-
Confidence 99999999999999999 567777999999999999999998877 899999999999999999999887776665555
Q ss_pred ccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccccchHHH
Q 041225 576 GFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLWPSD 632 (658)
Q Consensus 576 ~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~ 632 (658)
....|+.+.+++|.|++++. |+++++. .+++++.+ +.|.-+...-..+..+
T Consensus 724 --~~~~pl~~~qil~~nli~D~-~~lal~~--d~~~~~~m-~~P~~~~~~~~~~~~~ 774 (903)
T PRK15122 724 --IPFLPMLAIHLLLQNLMYDI-SQLSLPW--DKMDKEFL-RKPRKWDAKNIGRFML 774 (903)
T ss_pred --hccchhHHHHHHHHHHHHHH-HHHhhcC--CCCCHhhc-CCCCCCChhhhHHHHH
Confidence 23468999999999999995 8888864 33344444 8887766554444333
No 15
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=6e-57 Score=514.46 Aligned_cols=420 Identities=21% Similarity=0.263 Sum_probs=321.8
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.++.... +.
T Consensus 353 ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~---~~------------------------------- 398 (902)
T PRK10517 353 SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS---GK------------------------------- 398 (902)
T ss_pred HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC---CC-------------------------------
Confidence 46789999999999999999999999999999999999863110 00
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
..++++...++|.... ...+||.|.|+++++...+.
T Consensus 399 -----------~~~~ll~~a~l~~~~~-----------------------~~~~~p~d~All~~a~~~~~---------- 434 (902)
T PRK10517 399 -----------TSERVLHSAWLNSHYQ-----------------------TGLKNLLDTAVLEGVDEESA---------- 434 (902)
T ss_pred -----------CHHHHHHHHHhcCCcC-----------------------CCCCCHHHHHHHHHHHhcch----------
Confidence 0012334444432110 01259999999999865320
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHHHHh
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLSEYS 256 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~~~~ 256 (658)
......++.+..+||+|+||||+++++.+++.+.+++|||+|.|+++|+... ..++..++.+.+..+.++
T Consensus 435 ----~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a 510 (902)
T PRK10517 435 ----RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLN 510 (902)
T ss_pred ----hhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHH
Confidence 0011245667789999999999999998888889999999999999998532 234556777888899999
Q ss_pred hcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCe
Q 041225 257 SQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIK 336 (658)
Q Consensus 257 ~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~ 336 (658)
.+|+||+++|||.++.++.. + . ...|.|++++|.++++|++||+++++|++|+++||+
T Consensus 511 ~~G~rvlavA~k~~~~~~~~-~----~-----------------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~ 568 (902)
T PRK10517 511 RQGLRVVAVATKYLPAREGD-Y----Q-----------------RADESDLILEGYIAFLDPPKETTAPALKALKASGVT 568 (902)
T ss_pred hcCCEEEEEEEecCCccccc-c----c-----------------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCE
Confidence 99999999999988653210 0 0 012568999999999999999999999999999999
Q ss_pred EEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCC
Q 041225 337 VWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAK 416 (658)
Q Consensus 337 v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (658)
++|+|||+..+|..+|+++|+.. +.++
T Consensus 569 v~miTGD~~~tA~~IA~~lGI~~--~~v~--------------------------------------------------- 595 (902)
T PRK10517 569 VKILTGDSELVAAKVCHEVGLDA--GEVL--------------------------------------------------- 595 (902)
T ss_pred EEEEcCCCHHHHHHHHHHcCCCc--cCce---------------------------------------------------
Confidence 99999999999999999999942 1111
Q ss_pred CCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC
Q 041225 417 FSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD 496 (658)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD 496 (658)
.|.++...-.+++. ..+. +..++++.+|.+|..+|+.+++. ++.|+|+||
T Consensus 596 -----------------------~G~el~~l~~~el~----~~~~--~~~VfAr~sPe~K~~IV~~Lq~~-G~vVam~GD 645 (902)
T PRK10517 596 -----------------------IGSDIETLSDDELA----NLAE--RTTLFARLTPMHKERIVTLLKRE-GHVVGFMGD 645 (902)
T ss_pred -----------------------eHHHHHhCCHHHHH----HHHh--hCcEEEEcCHHHHHHHHHHHHHC-CCEEEEECC
Confidence 11111110001111 1111 14589999999999999999997 689999999
Q ss_pred CcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041225 497 GANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFT 575 (658)
Q Consensus 497 g~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 575 (658)
|.||+|+|+.||+|||| +++.+.+|++||+|+.++++.....++ +||..|.|+++++.|.+..|+..++..++..++.
T Consensus 646 GvNDaPALk~ADVGIAm-g~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~ 724 (902)
T PRK10517 646 GINDAPALRAADIGISV-DGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL 724 (902)
T ss_pred CcchHHHHHhCCEEEEe-CCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 99999999999999999 577778999999999999999988877 8999999999999999999998888877766662
Q ss_pred ccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccccchHHHHHHHH
Q 041225 576 GFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLWPSDIQIAR 637 (658)
Q Consensus 576 ~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~ 637 (658)
...|+.+.+++|.|++++ +|.++++.. + ....+++.|..|......+...+..+.
T Consensus 725 ---~~~pl~~~qiL~inl~~D-~~~~al~~d--~-~~~~~m~~p~r~~~~~~~~~~~~~g~~ 779 (902)
T PRK10517 725 ---PFLPMLPLHLLIQNLLYD-VSQVAIPFD--N-VDDEQIQKPQRWNPADLGRFMVFFGPI 779 (902)
T ss_pred ---hhhhhHHHHHHHHHHHHH-HhHHhhcCC--C-CChhhhcCCCCCCHHHHHHHHHHHHHH
Confidence 236899999999999999 788888642 2 334456778777666654444444443
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=5e-56 Score=507.50 Aligned_cols=408 Identities=21% Similarity=0.273 Sum_probs=314.3
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.+++.....
T Consensus 318 ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~---------------------------------- 363 (867)
T TIGR01524 318 SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE---------------------------------- 363 (867)
T ss_pred HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC----------------------------------
Confidence 4678999999999999999999999999999999999987421100
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
...+++...++|+.. +-..+||.|.|+++++......
T Consensus 364 -----------~~~~~l~~a~l~~~~-----------------------~~~~~~p~~~Al~~~~~~~~~~--------- 400 (867)
T TIGR01524 364 -----------TSERVLKMAWLNSYF-----------------------QTGWKNVLDHAVLAKLDESAAR--------- 400 (867)
T ss_pred -----------CHHHHHHHHHHhCCC-----------------------CCCCCChHHHHHHHHHHhhchh---------
Confidence 001223333333211 0013499999999998753211
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHHHHh
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLSEYS 256 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~~~~ 256 (658)
.....++.+..+||+|+||||+++++++++.+.+++|||+|.|+++|++.. ..++..++.+.+.++.++
T Consensus 401 -----~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a 475 (867)
T TIGR01524 401 -----QTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMN 475 (867)
T ss_pred -----hHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHH
Confidence 011245667789999999999999998777788999999999999997542 124455677888899999
Q ss_pred hcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCe
Q 041225 257 SQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIK 336 (658)
Q Consensus 257 ~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~ 336 (658)
.+|+|++++|||.++.++.. + . ...+.|++++|.++++|++|++++++|++|+++||+
T Consensus 476 ~~G~rvlavA~~~~~~~~~~-~----~-----------------~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~ 533 (867)
T TIGR01524 476 RQGIRVIAVATKTLKVGEAD-F----T-----------------KTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGIN 533 (867)
T ss_pred hcCCEEEEEEEeccCccccc-c----c-----------------ccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCE
Confidence 99999999999998654210 0 0 002467899999999999999999999999999999
Q ss_pred EEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCC
Q 041225 337 VWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAK 416 (658)
Q Consensus 337 v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (658)
++|+|||+..+|..+|+++|+... .++
T Consensus 534 vvmiTGD~~~tA~aIA~~lGI~~~--~v~--------------------------------------------------- 560 (867)
T TIGR01524 534 VKVLTGDNEIVTARICQEVGIDAN--DFL--------------------------------------------------- 560 (867)
T ss_pred EEEEcCCCHHHHHHHHHHcCCCCC--Cee---------------------------------------------------
Confidence 999999999999999999999532 111
Q ss_pred CCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC
Q 041225 417 FSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD 496 (658)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD 496 (658)
.|.++...-.+++ ...+. +..++++++|.+|..+|+.+++. ++.|+|+||
T Consensus 561 -----------------------~g~~l~~~~~~el----~~~~~--~~~vfAr~~Pe~K~~iV~~lq~~-G~vVam~GD 610 (867)
T TIGR01524 561 -----------------------LGADIEELSDEEL----ARELR--KYHIFARLTPMQKSRIIGLLKKA-GHTVGFLGD 610 (867)
T ss_pred -----------------------ecHhhhhCCHHHH----HHHhh--hCeEEEECCHHHHHHHHHHHHhC-CCEEEEECC
Confidence 1111100000001 11111 24589999999999999999998 689999999
Q ss_pred CcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041225 497 GANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFT 575 (658)
Q Consensus 497 g~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 575 (658)
|.||.|+|+.||+|||| +++.+.+|++||+|+.+.++.....++ +||..|+|+++++.|.+..|+..++..++..++.
T Consensus 611 GvNDapALk~AdVGIAm-g~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~ 689 (867)
T TIGR01524 611 GINDAPALRKADVGISV-DTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFI 689 (867)
T ss_pred CcccHHHHHhCCEEEEe-CCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 99999999999999999 567777999999999999999988877 8999999999999999999998888777666552
Q ss_pred ccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcccccc
Q 041225 576 GFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQ 625 (658)
Q Consensus 576 ~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~ 625 (658)
...|+.+.+++|+|++++ +|+++++. |.+...+++.|..+...
T Consensus 690 ---~~~pl~~~qil~inl~~d-~~~~al~~---~~~~~~~m~~p~~~~~~ 732 (867)
T TIGR01524 690 ---PFLPMLSLHLLIQNLLYD-FSQLTLPW---DKMDREFLKKPHQWEQK 732 (867)
T ss_pred ---hhhhHHHHHHHHHHHHHH-HHHHhhcC---CCCChHhhCCCCCCChh
Confidence 346899999999999999 79999874 22334455677765443
No 17
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-55 Score=461.57 Aligned_cols=477 Identities=21% Similarity=0.235 Sum_probs=370.8
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+|+++||++.++|+||..++||||||||||+|+|+|.++|.+......+... .+++
T Consensus 348 a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~-------~~~~---------------- 404 (1019)
T KOG0203|consen 348 ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTE-------DQSG---------------- 404 (1019)
T ss_pred hhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechh-------hhhc----------------
Confidence 46889999999999999999999999999999999999999887654322110 0000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
......+.....+..+..+||.+.....+... ..-. .-..+++.|.||++|+...-..
T Consensus 405 ---~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dv---------Pv~k-k~v~G~~se~ALlk~~e~~~~~--------- 462 (1019)
T KOG0203|consen 405 ---QSFDKSSATFIALSRIATLCNRAVFKPGQDDV---------PVLK-RDVAGDASEVALLKFIELILGS--------- 462 (1019)
T ss_pred ---ccccccCchHHHHHHHHHHhCcceecccccCC---------ceee-eeccCCHHHHHHHHHHHHhcch---------
Confidence 00011234567788999999999887554311 0011 1234599999999999754221
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCC---CcEEEEEeCCchHhHHhhhcC------ccccHHHHHHHHHHHH
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPD---NSVKVLVKGADSSMFNILAKD------SKRNDLIRHITQSHLS 253 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~---~~~~l~~KGa~e~i~~~~~~~------~~~~~~~~~~~~~~~~ 253 (658)
+..-+.+++.+...||+|.+|+.-.+.+..+ .++.+.+|||||.++++|+.. ...+++.++.+.....
T Consensus 463 ---~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~ 539 (1019)
T KOG0203|consen 463 ---VMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYL 539 (1019)
T ss_pred ---HHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHH
Confidence 1233456777889999999999999998765 467889999999999999853 3457889999999999
Q ss_pred HHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhc
Q 041225 254 EYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQA 333 (658)
Q Consensus 254 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~ 333 (658)
.+...|.||++||++.++++++++.-+-. .....+-..++.|+|.+++-|++|..+++|+.+++.+
T Consensus 540 ~lg~~GerVlgF~~~~l~~~~~p~~~~f~--------------~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsA 605 (1019)
T KOG0203|consen 540 ELGGLGERVLGFCDLELPDEKFPRGFQFD--------------TDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSA 605 (1019)
T ss_pred HhhhcchHHHHHHHHhcchhcCCCceEee--------------cCCCCCcchhccccchhhccCCCcccCchhhhhhhhh
Confidence 99999999999999999988665321100 0112234557899999999999999999999999999
Q ss_pred CCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhc
Q 041225 334 GIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISN 413 (658)
Q Consensus 334 GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (658)
||+++|+|||++.+|.++|++.||+....++ .+.+.+..
T Consensus 606 GIkvimVTgdhpiTAkAiA~~vgIi~~~~et----------~e~~a~r~------------------------------- 644 (1019)
T KOG0203|consen 606 GIKVIMVTGDHPITAKAIAKSVGIISEGSET----------VEDIAKRL------------------------------- 644 (1019)
T ss_pred CceEEEEecCccchhhhhhhheeeecCCchh----------hhhhHHhc-------------------------------
Confidence 9999999999999999999999987653221 11111000
Q ss_pred CCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEE
Q 041225 414 DAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLA 493 (658)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~a 493 (658)
.... ..+......+.++.|.++...-.+++. .++......+++|.+|.||..+++..++. ++.|..
T Consensus 645 ~~~v---------~~vn~~~a~a~VihG~eL~~~~~~qld----~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaV 710 (1019)
T KOG0203|consen 645 NIPV---------EQVNSRDAKAAVIHGSELPDMSSEQLD----ELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAV 710 (1019)
T ss_pred CCcc---------cccCccccceEEEecccccccCHHHHH----HHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEE
Confidence 0000 011122245778888887766555443 34455567899999999999999999998 689999
Q ss_pred EcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 494 IGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYI 572 (658)
Q Consensus 494 iGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 572 (658)
.|||.||.|+||.||+||||.-++++.+|++||+|+.|++|.+++.-+ +||.+|+|++|.|.|++..|+..+.|.++|.
T Consensus 711 TGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi 790 (1019)
T KOG0203|consen 711 TGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFI 790 (1019)
T ss_pred eCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHH
Confidence 999999999999999999995556666899999999999999999888 8999999999999999999999999998888
Q ss_pred HhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcc
Q 041225 573 LFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKL 621 (658)
Q Consensus 573 ~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~ 621 (658)
++ ..+.++..+.++++++.++++|++.+|.+ ....+.+++.|.-
T Consensus 791 ~~---giPLplgtitIL~IDLgTDmvPAiSLAYE--~aEsDIM~r~PR~ 834 (1019)
T KOG0203|consen 791 LF---GIPLPLGTVTILCIDLGTDIVPAISLAYE--KAESDIMLRPPRN 834 (1019)
T ss_pred Hh---CCCcccchhhhhhhHhhcccchhhhHhcc--CchhhHHhcCCCC
Confidence 87 67889999999999999999999999743 2344555666665
No 18
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3.9e-53 Score=477.81 Aligned_cols=394 Identities=22% Similarity=0.283 Sum_probs=307.7
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+.
T Consensus 268 ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~-------------------------------- 315 (755)
T TIGR01647 268 AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD-------------------------------- 315 (755)
T ss_pred HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCC--------------------------------
Confidence 467899999999999999999999999999999999999976542110
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
..+++...++|+. ..+.||.|.|+++++.+.+.
T Consensus 316 ------------~~~~l~~a~~~~~-------------------------~~~~~pi~~Ai~~~~~~~~~---------- 348 (755)
T TIGR01647 316 ------------KDDVLLYAALASR-------------------------EEDQDAIDTAVLGSAKDLKE---------- 348 (755)
T ss_pred ------------HHHHHHHHHHhCC-------------------------CCCCChHHHHHHHHHHHhHH----------
Confidence 1123444455541 01349999999999876430
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCC-CcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPD-NSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~-~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
....++++..+||++.+|+|+++++.++ ++.++++||+++.|+++|+.. +..++.+.+.+++++.+|+|
T Consensus 349 ------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~----~~~~~~~~~~~~~~~~~G~r 418 (755)
T TIGR01647 349 ------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK----KEIEEKVEEKVDELASRGYR 418 (755)
T ss_pred ------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc----HHHHHHHHHHHHHHHhCCCE
Confidence 0123566788999999999999998775 777889999999999999753 23567788889999999999
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT 341 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T 341 (658)
++++|+|. .|.|++++|.++++|++||+++++|++|+++||+++|+|
T Consensus 419 vl~vA~~~---------------------------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miT 465 (755)
T TIGR01647 419 ALGVARTD---------------------------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVT 465 (755)
T ss_pred EEEEEEEc---------------------------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEEC
Confidence 99999983 135789999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCC
Q 041225 342 GDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVP 421 (658)
Q Consensus 342 Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (658)
||+..+|..+|+++|+... ++ +.+++
T Consensus 466 GD~~~tA~~IA~~lGI~~~---~~-----~~~~l---------------------------------------------- 491 (755)
T TIGR01647 466 GDHLAIAKETARRLGLGTN---IY-----TADVL---------------------------------------------- 491 (755)
T ss_pred CCCHHHHHHHHHHcCCCCC---Cc-----CHHHh----------------------------------------------
Confidence 9999999999999999532 00 00000
Q ss_pred CCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 041225 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV 501 (658)
Q Consensus 422 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi 501 (658)
..+.+....-.+ .+...+.. ..++++++|.||..+|+.+++. ++.|+|+|||.||.
T Consensus 492 -----------------~~~~~~~~~~~~----~~~~~~~~--~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDa 547 (755)
T TIGR01647 492 -----------------LKGDNRDDLPSG----ELGEMVED--ADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDA 547 (755)
T ss_pred -----------------cCCcchhhCCHH----HHHHHHHh--CCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccH
Confidence 000000000000 01111111 3489999999999999999997 68999999999999
Q ss_pred hhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 041225 502 SMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTT 580 (658)
Q Consensus 502 ~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~ 580 (658)
|+|+.||+|||| +++.+.+|++||+|+.+.++...+.++ +||..|+|+++++.|.+..|+..+++.++..++.++
T Consensus 548 pAL~~AdVGIAm-~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~--- 623 (755)
T TIGR01647 548 PALKKADVGIAV-AGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF--- 623 (755)
T ss_pred HHHHhCCeeEEe-cCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc---
Confidence 999999999999 567778999999999999999998877 899999999999999999999888777666655433
Q ss_pred cchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcccccccc
Q 041225 581 SALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQY 627 (658)
Q Consensus 581 ~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~ 627 (658)
++++++++|.|++.+. |.++++....+. .+.|.-|.....
T Consensus 624 -~l~~~~il~~~l~~d~-~~~~l~~~~~~~-----~~~p~~~~~~~~ 663 (755)
T TIGR01647 624 -YFPPIMVVIIAILNDG-TIMTIAYDNVKP-----SKLPQRWNLREV 663 (755)
T ss_pred -chhHHHHHHHHHHHhH-hHhhccCCCCCC-----CCCCCccchHHH
Confidence 3899999999999885 688886544432 266776665433
No 19
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-52 Score=444.93 Aligned_cols=538 Identities=22% Similarity=0.277 Sum_probs=366.9
Q ss_pred cCCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHH
Q 041225 20 DSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKL 99 (658)
Q Consensus 20 ~~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (658)
...++++|.|-++..+..-|+++++|||||||||++.+++.++......-............ .
T Consensus 447 ~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~-----------------~ 509 (1140)
T KOG0208|consen 447 SRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTED-----------------S 509 (1140)
T ss_pred HHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhh-----------------h
Confidence 35678999999999999999999999999999999999999987643221111000000000 0
Q ss_pred HHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEE--
Q 041225 100 MELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFER-- 177 (658)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~-- 177 (658)
....-+............+..++|.||+++.....-.+ +|.|.-+.+. .||.+.+.
T Consensus 510 ~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~G-------------------DPLdlkmfe~---t~w~~ee~~~ 567 (1140)
T KOG0208|consen 510 LQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVG-------------------DPLDLKMFES---TGWVYEEADI 567 (1140)
T ss_pred ccceeeccccccCCchHHHHHHHhhhceeEEeCCeecc-------------------Cceeeeeeec---cceEEEeccc
Confidence 00000000011111234678899999998887655333 4444333322 23333221
Q ss_pred ---------cCCeEEEEeCC----c-----EEEEEEEEeeCCCCCCCeeEEEEEcCC-CcEEEEEeCCchHhHHhhhcCc
Q 041225 178 ---------TSGHIVIDING----E-----GLRLDVLGLHEFDSVRKRMSVVIRFPD-NSVKVLVKGADSSMFNILAKDS 238 (658)
Q Consensus 178 ---------~~~~~~~~~~g----~-----~~~~~il~~~~F~s~rk~msviv~~~~-~~~~l~~KGa~e~i~~~~~~~~ 238 (658)
+....+++.+. + ...+-|++.+||+|..+||||||+.++ +...+|+|||||.|.++|++..
T Consensus 568 ~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~t 647 (1140)
T KOG0208|consen 568 EDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPET 647 (1140)
T ss_pred cchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCccc
Confidence 01111222211 1 126899999999999999999999985 6688999999999999999875
Q ss_pred cccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccc
Q 041225 239 KRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDK 318 (658)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~ 318 (658)
+++.+.+.++.|+.+|+|++++|+|.|... .|.+.. .-....+|.|++|+|.+.++++
T Consensus 648 -----vP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~~--------------~~~Rd~vEs~l~FlGLiVmeNk 705 (1140)
T KOG0208|consen 648 -----VPADYQEVLKEYTHQGFRVIALASKELETS---TLQKAQ--------------KLSRDTVESNLEFLGLIVMENK 705 (1140)
T ss_pred -----CCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHHh--------------hccHhhhhccceeeEEEEeecc
Confidence 578899999999999999999999999876 222211 1134568899999999999999
Q ss_pred cCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHH--HHHHHHHHHHhcCcccCccccc
Q 041225 319 LQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEE--CKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 319 l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~--~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
++++++.+|++|.++.|+.+|||||+..||..+|++||++.+..+++.....+.+. ..++
T Consensus 706 LK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i------------------ 767 (1140)
T KOG0208|consen 706 LKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQI------------------ 767 (1140)
T ss_pred cccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCcee------------------
Confidence 99999999999999999999999999999999999999999988887765432110 0000
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
.+...+.. ...... .....+........+.-....+.++++|+.+..++ .+..+.+..+... ..|++|++|.||
T Consensus 768 ~w~~ve~~--~~~~~~-~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~--~~VfARMsP~qK 841 (1140)
T KOG0208|consen 768 VWLCVESQ--TQFLDP-KEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLK--GTVFARMSPDQK 841 (1140)
T ss_pred EEEEccCc--cccCCC-CccCccccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhc--CeEEeecCchhH
Confidence 00000000 000000 00000000000001222345678899999998887 3333334444444 448999999999
Q ss_pred HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHH
Q 041225 477 AGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVL 555 (658)
Q Consensus 477 ~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~ 555 (658)
...|+.+++. +..|.++|||+||+.+||+||+||+.+.++ |..||.|+..-++..+.+.++ +||..+...-..++
T Consensus 842 ~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~Fk 917 (1140)
T KOG0208|consen 842 AELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFK 917 (1140)
T ss_pred HHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHH
Confidence 9999999998 689999999999999999999999996555 889999999988888888766 99998887777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccc-cccchHHHHH
Q 041225 556 YNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVV-QQYLWPSDIQ 634 (658)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~-~~~~~~~~~~ 634 (658)
|.-.+++ ++|+..++. +.-...++++|.++++++....-+++++-++ ...+.-...|.-.-. ....-+.+.|
T Consensus 918 YMalYs~----iqFisv~~L-Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~--a~~~L~~~rP~~~L~s~~~~~~l~~q 990 (1140)
T KOG0208|consen 918 YMALYSA----IQFISVVFL-YLINSNLGDLQFLFIDLLIITPIAVMMSRFD--ASDKLFPKRPPTNLLSKKILVPLLLQ 990 (1140)
T ss_pred HHHHHHH----HHHHhhhee-eeecccccchhhhhhHHHHHHHHHHHHccCc--HHHHhcCCCCCccccccchhhhhHHH
Confidence 7543333 233332222 2344678899999999888876666665443 233333333433222 2355577899
Q ss_pred HHHHHHHHhhccccccCcc
Q 041225 635 IAREAEVLRKGSNYLAPQA 653 (658)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~ 653 (658)
++....+...|..+..||.
T Consensus 991 ~vli~l~q~i~~l~~~~qp 1009 (1140)
T KOG0208|consen 991 IVLICLVQWILTLIVEPQP 1009 (1140)
T ss_pred HHHHHHHHHhhheeecccc
Confidence 9999999999988887775
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.3e-46 Score=408.42 Aligned_cols=363 Identities=19% Similarity=0.225 Sum_probs=283.3
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
..++|+++|++.++|+||++++||||||||||+|++.+.++...+.
T Consensus 279 ~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~---------------------------------- 324 (673)
T PRK14010 279 VTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS---------------------------------- 324 (673)
T ss_pred HhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC----------------------------------
Confidence 3578899999999999999999999999999997776666432110
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
....+++.+.++|+.. +.||.++|+++++++.|+....
T Consensus 325 -----------~~~~~ll~~a~~~~~~--------------------------s~~P~~~AIv~~a~~~~~~~~~----- 362 (673)
T PRK14010 325 -----------SSFERLVKAAYESSIA--------------------------DDTPEGRSIVKLAYKQHIDLPQ----- 362 (673)
T ss_pred -----------ccHHHHHHHHHHhcCC--------------------------CCChHHHHHHHHHHHcCCCchh-----
Confidence 0112345566667521 2399999999999887653210
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
......||++++|+|++.++ +. .+.||+++.+++.|..... .....+.+..++++.+|+|
T Consensus 363 ------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~~g~---~~~~~~~~~~~~~a~~G~~ 422 (673)
T PRK14010 363 ------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKEAGG---HIPVDLDALVKGVSKKGGT 422 (673)
T ss_pred ------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhhcCC---CCchHHHHHHHHHHhCCCe
Confidence 00123799999999999754 22 4569999999999985321 1122355667788999999
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT 341 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T 341 (658)
+++++ .|++++|.+++.|++|++++++|++|+++||+++|+|
T Consensus 423 ~l~v~--------------------------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiT 464 (673)
T PRK14010 423 PLVVL--------------------------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCT 464 (673)
T ss_pred EEEEE--------------------------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEEC
Confidence 98765 2578999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCC
Q 041225 342 GDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVP 421 (658)
Q Consensus 342 Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (658)
||+..+|..+|+++|+.
T Consensus 465 GDn~~TA~aIA~elGI~--------------------------------------------------------------- 481 (673)
T PRK14010 465 GDNELTAATIAKEAGVD--------------------------------------------------------------- 481 (673)
T ss_pred CCCHHHHHHHHHHcCCc---------------------------------------------------------------
Confidence 99999999999999982
Q ss_pred CCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 041225 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV 501 (658)
Q Consensus 422 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi 501 (658)
.++++.+|++|...|+.+++. ++.|+|+|||.||.
T Consensus 482 --------------------------------------------~v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDA 516 (673)
T PRK14010 482 --------------------------------------------RFVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDA 516 (673)
T ss_pred --------------------------------------------eEEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhH
Confidence 157899999999999999997 68999999999999
Q ss_pred hhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 041225 502 SMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTT 580 (658)
Q Consensus 502 ~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~ 580 (658)
|+|+.||+|||| |++.+.+|++||+|+.++++.....++ +||..|.++++++.|.+..|+...+..+...|...+.+-
T Consensus 517 PALa~ADVGIAM-gsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~~ 595 (673)
T PRK14010 517 PALAEANVGLAM-NSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAM 595 (673)
T ss_pred HHHHhCCEEEEe-CCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcccc
Confidence 999999999999 577888999999999999999999887 899999999999999999999777766554444322221
Q ss_pred ---------cchhhHH-HHHHHHH--HhhhhhhhheecccCCChHHHhhCCcc-cccccc
Q 041225 581 ---------SALTDWS-SVFYSLL--YTSVPTIVVGIVDKDLSHKTLMQYPKL-YVVQQY 627 (658)
Q Consensus 581 ---------~~~~~~~-~~~~n~~--~~~~p~~~~~~~~~~~~~~~~~~~p~~-y~~~~~ 627 (658)
+|.+... -+.||.+ -.+.|.-.-|+-+++.+...+++..-+ |-.|..
T Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (673)
T PRK14010 596 NHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILMKNMLVYGLGGM 655 (673)
T ss_pred hhhccccCCChHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhCeEEeccCce
Confidence 2222222 2345533 335677777888999999888876554 776654
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.4e-44 Score=394.74 Aligned_cols=366 Identities=19% Similarity=0.246 Sum_probs=282.7
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
..++|+++|++.++|+||++++||||||||||+|+|.+.+++..+..
T Consensus 279 ~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------------------------------- 325 (679)
T PRK01122 279 VLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV--------------------------------- 325 (679)
T ss_pred HhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC---------------------------------
Confidence 35788999999999999999999999999999999999988643210
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHH-cCcEEEEEcCC
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASA-YGYTLFERTSG 180 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~-~g~~~~~~~~~ 180 (658)
..++++.+.++|+.. +.||.++|++++++. .+....
T Consensus 326 ------------~~~~ll~~a~~~s~~--------------------------s~hP~~~AIv~~a~~~~~~~~~----- 362 (679)
T PRK01122 326 ------------TEEELADAAQLSSLA--------------------------DETPEGRSIVVLAKQRFNLRER----- 362 (679)
T ss_pred ------------CHHHHHHHHHHhcCC--------------------------CCCchHHHHHHHHHhhcCCCch-----
Confidence 012345555666421 238999999999986 333210
Q ss_pred eEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCC
Q 041225 181 HIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGL 260 (658)
Q Consensus 181 ~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 260 (658)
...++.....||++.+++|++.+. + ..|+||+++.+++.|..... ..++.+.+..++++.+|.
T Consensus 363 ---------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~~g~---~~~~~~~~~~~~~a~~G~ 425 (679)
T PRK01122 363 ---------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVESNGG---HFPAELDAAVDEVARKGG 425 (679)
T ss_pred ---------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHhcCC---cChHHHHHHHHHHHhCCC
Confidence 011344567899999988887653 3 57999999999999964321 234567778889999999
Q ss_pred eEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEE
Q 041225 261 RTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVL 340 (658)
Q Consensus 261 r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~ 340 (658)
|++++|+ |++++|.++++|++|++++++|++|+++||+++|+
T Consensus 426 ~~l~va~--------------------------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMi 467 (679)
T PRK01122 426 TPLVVAE--------------------------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMI 467 (679)
T ss_pred cEEEEEE--------------------------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEE
Confidence 9999983 57899999999999999999999999999999999
Q ss_pred ecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCC
Q 041225 341 TGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV 420 (658)
Q Consensus 341 TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (658)
|||+..+|..+|+++|+.
T Consensus 468 TGDn~~TA~aIA~elGId-------------------------------------------------------------- 485 (679)
T PRK01122 468 TGDNPLTAAAIAAEAGVD-------------------------------------------------------------- 485 (679)
T ss_pred CCCCHHHHHHHHHHcCCc--------------------------------------------------------------
Confidence 999999999999999982
Q ss_pred CCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 041225 421 PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500 (658)
Q Consensus 421 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ND 500 (658)
.+.++.+|++|...|+.+++. ++.|+|+|||.||
T Consensus 486 ---------------------------------------------~v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvND 519 (679)
T PRK01122 486 ---------------------------------------------DFLAEATPEDKLALIRQEQAE-GRLVAMTGDGTND 519 (679)
T ss_pred ---------------------------------------------EEEccCCHHHHHHHHHHHHHc-CCeEEEECCCcch
Confidence 157889999999999999998 6799999999999
Q ss_pred hhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhhc
Q 041225 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAV---FVLMLFWYILFTG 576 (658)
Q Consensus 501 i~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~ 576 (658)
.|+|+.||+|||| |++.+.+|++||+|+.+.++.+.+.++ +||...-.-..+..|++..-+. .++|.++...+..
T Consensus 520 APALa~ADVGIAM-gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~~ 598 (679)
T PRK01122 520 APALAQADVGVAM-NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYPQ 598 (679)
T ss_pred HHHHHhCCEeEEe-CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCcc
Confidence 9999999999999 577788999999999999999999877 8999986666667777765442 4445555544422
Q ss_pred ccc------ccchhhHH-HHHHHHH--HhhhhhhhheecccCCChHHHhhCCcc-cccccc
Q 041225 577 FST------TSALTDWS-SVFYSLL--YTSVPTIVVGIVDKDLSHKTLMQYPKL-YVVQQY 627 (658)
Q Consensus 577 ~s~------~~~~~~~~-~~~~n~~--~~~~p~~~~~~~~~~~~~~~~~~~p~~-y~~~~~ 627 (658)
... .+|.+... -+.||.+ -.++|.-.-|+-+++.+...+++..-+ |-.|..
T Consensus 599 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (679)
T PRK01122 599 LNALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYRPLSAAALLRRNLLIYGLGGL 659 (679)
T ss_pred ccccccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHhhceeEecCCce
Confidence 111 12333222 2345533 345677777888999999888866554 777654
No 22
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=5.4e-43 Score=381.39 Aligned_cols=366 Identities=18% Similarity=0.231 Sum_probs=281.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|+++|++.++|+||++++||||||||||+|+|++.+++..+..
T Consensus 281 ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------------------------------- 326 (675)
T TIGR01497 281 LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV---------------------------------- 326 (675)
T ss_pred HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC----------------------------------
Confidence 4678999999999999999999999999999999999988643210
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
...+++.+.++|+. .+.||.++|+++++++.|.....
T Consensus 327 -----------~~~~ll~~aa~~~~--------------------------~s~hP~a~Aiv~~a~~~~~~~~~------ 363 (675)
T TIGR01497 327 -----------DEKTLADAAQLASL--------------------------ADDTPEGKSIVILAKQLGIREDD------ 363 (675)
T ss_pred -----------cHHHHHHHHHHhcC--------------------------CCCCcHHHHHHHHHHHcCCCccc------
Confidence 01234555556642 12489999999999887653211
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeE
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRT 262 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 262 (658)
...+.....||++.+++|++.+. ++ ..++||+++.+++.|..... ..+..+.+.+++++.+|.|+
T Consensus 364 --------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~---~~~~~~~~~~~~~a~~G~r~ 428 (675)
T TIGR01497 364 --------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGG---HIPTDLDQAVDQVARQGGTP 428 (675)
T ss_pred --------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCC---CCcHHHHHHHHHHHhCCCeE
Confidence 11234567899999877776543 33 57899999999998863221 12345677788999999999
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec
Q 041225 263 LVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 263 l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
+++|+ |++++|.+++.|++||+++++|++|+++|++++|+||
T Consensus 429 l~va~--------------------------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTG 470 (675)
T TIGR01497 429 LVVCE--------------------------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITG 470 (675)
T ss_pred EEEEE--------------------------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcC
Confidence 99995 3589999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCC
Q 041225 343 DKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQ 422 (658)
Q Consensus 343 r~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (658)
|+..+|..+|+++|+.
T Consensus 471 D~~~ta~~iA~~lGI~---------------------------------------------------------------- 486 (675)
T TIGR01497 471 DNRLTAAAIAAEAGVD---------------------------------------------------------------- 486 (675)
T ss_pred CCHHHHHHHHHHcCCC----------------------------------------------------------------
Confidence 9999999999999982
Q ss_pred CCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 041225 423 GHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVS 502 (658)
Q Consensus 423 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~ 502 (658)
.+.++.+|.+|...++.+++. +..|+|+|||.||.|
T Consensus 487 -------------------------------------------~v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDap 522 (675)
T TIGR01497 487 -------------------------------------------DFIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAP 522 (675)
T ss_pred -------------------------------------------EEEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHH
Confidence 145788999999999999987 578999999999999
Q ss_pred hhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhhcc-
Q 041225 503 MIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVL---MLFWYILFTGF- 577 (658)
Q Consensus 503 Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~- 577 (658)
||+.||+|||| +++.+.++++||+++.+.++.+...++ +||..+-....+..|++...+.-.| |..|...+...
T Consensus 523 AL~~AdvGiAm-~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (675)
T TIGR01497 523 ALAQADVGVAM-NSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQLQ 601 (675)
T ss_pred HHHhCCEeEEe-CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHHHHHHHHhhCcchh
Confidence 99999999999 567777999999999999999999877 8999999989999998777664333 33333333111
Q ss_pred -----ccccchhhHH-HHHHHHH--HhhhhhhhheecccCCChHHHhhCCcc-cccccc
Q 041225 578 -----STTSALTDWS-SVFYSLL--YTSVPTIVVGIVDKDLSHKTLMQYPKL-YVVQQY 627 (658)
Q Consensus 578 -----s~~~~~~~~~-~~~~n~~--~~~~p~~~~~~~~~~~~~~~~~~~p~~-y~~~~~ 627 (658)
.-.+|.+... -+.||.+ -.+.|.-.-|+-+++.+...+++..-+ |-.|..
T Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (675)
T TIGR01497 602 ALNIMCLHSPDSAILSALIFNALIIPALIPLALKGVSYRPLTASALLRRNLWIYGLGGL 660 (675)
T ss_pred hhccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHhhceEEecCCce
Confidence 1112333222 2345533 335667777888999999888766544 666654
No 23
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=8.1e-39 Score=349.08 Aligned_cols=270 Identities=38% Similarity=0.572 Sum_probs=232.7
Q ss_pred CCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHHH
Q 041225 24 GSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELL 103 (658)
Q Consensus 24 ~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (658)
++||++|+++++|+||++++||||||||||+|+|+|.++++.+.
T Consensus 213 ~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------------ 256 (499)
T TIGR01494 213 KKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------------------------------ 256 (499)
T ss_pred HCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC------------------------------------
Confidence 45899999999999999999999999999999999999875431
Q ss_pred hhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEE
Q 041225 104 SKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIV 183 (658)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~ 183 (658)
++.++||+|.|++++++..+
T Consensus 257 ------------------------------------------------~~~s~hp~~~ai~~~~~~~~------------ 276 (499)
T TIGR01494 257 ------------------------------------------------EYLSGHPDERALVKSAKWKI------------ 276 (499)
T ss_pred ------------------------------------------------CcCCCChHHHHHHHHhhhcC------------
Confidence 12345999999999986421
Q ss_pred EEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEE
Q 041225 184 IDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTL 263 (658)
Q Consensus 184 ~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l 263 (658)
+...||++.+++|+++++.+++ .|+||+++.+.+.|.. +.+.++.++.+|+|++
T Consensus 277 ------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~-----------~~~~~~~~~~~g~~~~ 330 (499)
T TIGR01494 277 ------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD-----------LEEKVKELAQSGLRVL 330 (499)
T ss_pred ------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-----------HHHHHHHHHhCCCEEE
Confidence 2357999999999999997544 4789999999998853 2234456788999999
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 264 VVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 264 ~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
++|++. +++|.++++|++++++.++|+.|+++|++++|+|||
T Consensus 331 ~~a~~~--------------------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD 372 (499)
T TIGR01494 331 AVASKE--------------------------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGD 372 (499)
T ss_pred EEEECC--------------------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCC
Confidence 999753 699999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCC
Q 041225 344 KQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQG 423 (658)
Q Consensus 344 ~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (658)
+..++..+|+++|+
T Consensus 373 ~~~~a~~ia~~lgi------------------------------------------------------------------ 386 (499)
T TIGR01494 373 NVLTAKAIAKELGI------------------------------------------------------------------ 386 (499)
T ss_pred CHHHHHHHHHHcCc------------------------------------------------------------------
Confidence 99999999999874
Q ss_pred CchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhh
Q 041225 424 HDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSM 503 (658)
Q Consensus 424 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~M 503 (658)
+++..|.+|...++.+++. +..|+++|||.||.+|
T Consensus 387 --------------------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~a 421 (499)
T TIGR01494 387 --------------------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPA 421 (499)
T ss_pred --------------------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHH
Confidence 2446789999999999887 5789999999999999
Q ss_pred hhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 504 IQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFW 570 (658)
Q Consensus 504 l~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~ 570 (658)
|+.||+|||| + ++.+||+++.++++.....++ +||..+.++++.+.|.+++|+..+.+.++
T Consensus 422 l~~Advgia~-~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 422 LKKADVGIAM-G-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred HHhCCCcccc-c-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 4 688899999998887777665 99999999999999999999987766655
No 24
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-39 Score=338.51 Aligned_cols=369 Identities=26% Similarity=0.310 Sum_probs=261.6
Q ss_pred CCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHHH
Q 041225 24 GSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELL 103 (658)
Q Consensus 24 ~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (658)
+.+|.|..+--+-=.|+||+-|||||||||+..|.|.++--.....+.-
T Consensus 462 k~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~------------------------------- 510 (1160)
T KOG0209|consen 462 KLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGAL------------------------------- 510 (1160)
T ss_pred HhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccc-------------------------------
Confidence 5577888888888899999999999999999999999974322111100
Q ss_pred hhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEE
Q 041225 104 SKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIV 183 (658)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~ 183 (658)
.+-+....+-++++|.||+.....++ .-++|.|+|.++.. ||.+...+. +
T Consensus 511 -----~~~s~~p~~t~~vlAscHsLv~le~~-------------------lVGDPlEKA~l~~v---~W~~~k~~~---v 560 (1160)
T KOG0209|consen 511 -----TPASKAPNETVLVLASCHSLVLLEDK-------------------LVGDPLEKATLEAV---GWNLEKKNS---V 560 (1160)
T ss_pred -----cchhhCCchHHHHHHHHHHHHHhcCc-------------------ccCChHHHHHHHhc---CcccccCcc---c
Confidence 00011224467899999988664322 22499999998864 676654332 3
Q ss_pred EEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCC----CcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcC
Q 041225 184 IDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPD----NSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQG 259 (658)
Q Consensus 184 ~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~----~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 259 (658)
..-.|.....+|++.+.|+|..||||||+.... -.+++.+|||||.|.+++.. ++..+++...+++++|
T Consensus 561 ~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d-------vP~dY~~iYk~ytR~G 633 (1160)
T KOG0209|consen 561 CPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD-------VPKDYDEIYKRYTRQG 633 (1160)
T ss_pred CCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh-------CchhHHHHHHHHhhcc
Confidence 333455557889999999999999999998753 25788999999999999885 4677888999999999
Q ss_pred CeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEE
Q 041225 260 LRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWV 339 (658)
Q Consensus 260 ~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i 339 (658)
.|||+++||.+..-...+ .-+.....+|.|+||.|.+-+.-+++++++++|+.|++.+++++|
T Consensus 634 sRVLALg~K~l~~~~~~q-----------------~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvM 696 (1160)
T KOG0209|consen 634 SRVLALGYKPLGDMMVSQ-----------------VRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVM 696 (1160)
T ss_pred ceEEEEecccccccchhh-----------------hhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEE
Confidence 999999999997322111 111244568999999999999999999999999999999999999
Q ss_pred EecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCC-
Q 041225 340 LTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFS- 418 (658)
Q Consensus 340 ~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 418 (658)
+|||++-||.++|+++|++.....++...+... .....+. +....+.
T Consensus 697 ITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~--------------------~~~~~w~------------s~d~t~~l 744 (1160)
T KOG0209|consen 697 ITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGD--------------------GNQLEWV------------SVDGTIVL 744 (1160)
T ss_pred EeCCCccchheehheeeeeccCceeeccCccCC--------------------CceeeEe------------cCCCceee
Confidence 999999999999999999865433332221100 0000000 0000000
Q ss_pred CCCCCCchhhhhccCcEEEEEeCccHHHHHHHh-hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCC
Q 041225 419 DVPQGHDVKEVAAIASLALIIDGNSLVYILEKD-LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDG 497 (658)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg 497 (658)
......... .-.....+.++|..+....... +..... ..+|++|+.|.||-.+|..+++. +..++|+|||
T Consensus 745 p~~p~~~~~--~l~~~~dlcitG~~l~~l~~~~~l~~l~~------hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDG 815 (1160)
T KOG0209|consen 745 PLKPGKKKT--LLAETHDLCITGSALDHLQATDQLRRLIP------HVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDG 815 (1160)
T ss_pred cCCCCccch--hhhhhhhhhcchhHHHHHhhhHHHHHhhh------heeEEEeeChhhHHHHHHHHHhc-CeEEEEecCC
Confidence 000000000 0011223456777776665543 221111 26799999999999999999998 6899999999
Q ss_pred cCChhhhhhcceeEEecCccc
Q 041225 498 ANDVSMIQMADVGVGICGQEG 518 (658)
Q Consensus 498 ~NDi~Ml~~A~vgIam~~~~~ 518 (658)
.||+.+||.||+|||.-++..
T Consensus 816 TNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 816 TNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred CcchhhhhhcccceehhcCCh
Confidence 999999999999999855443
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-37 Score=333.25 Aligned_cols=295 Identities=26% Similarity=0.306 Sum_probs=230.7
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++||++|+..++|.|+++|+|+||||||||+|++.+..+...+. ..
T Consensus 387 A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~e------------------------------- 433 (713)
T COG2217 387 ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--DE------------------------------- 433 (713)
T ss_pred HhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--CH-------------------------------
Confidence 468999999999999999999999999999999999999875542 10
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.++ +.+ ...++..|.||+.+|+++++...|..-.. .
T Consensus 434 -------------~~~-L~l-------------------------aAalE~~S~HPiA~AIv~~a~~~~~~~~~--~--- 469 (713)
T COG2217 434 -------------DEL-LAL-------------------------AAALEQHSEHPLAKAIVKAAAERGLPDVE--D--- 469 (713)
T ss_pred -------------HHH-HHH-------------------------HHHHHhcCCChHHHHHHHHHHhcCCCCcc--c---
Confidence 011 111 12345667899999999999987721111 1
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeE
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRT 262 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 262 (658)
+..+.|.+.+.++- | ..+.-|.+.-+.+.-... .. .....+.+..+|..+
T Consensus 470 ~~~i~G~Gv~~~v~--------------------g--~~v~vG~~~~~~~~~~~~-------~~-~~~~~~~~~~~G~t~ 519 (713)
T COG2217 470 FEEIPGRGVEAEVD--------------------G--ERVLVGNARLLGEEGIDL-------PL-LSERIEALESEGKTV 519 (713)
T ss_pred eeeeccCcEEEEEC--------------------C--EEEEEcCHHHHhhcCCCc-------cc-hhhhHHHHHhcCCeE
Confidence 55677777766441 1 233445554442211100 00 233344555566554
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec
Q 041225 263 LVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 263 l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
+.+ -.||.++|.+.+.|++|++++++|++|++.|++++|+||
T Consensus 520 v~v--------------------------------------a~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTG 561 (713)
T COG2217 520 VFV--------------------------------------AVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTG 561 (713)
T ss_pred EEE--------------------------------------EECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcC
Confidence 444 478999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCC
Q 041225 343 DKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQ 422 (658)
Q Consensus 343 r~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (658)
|+..+|..+|+++|+..
T Consensus 562 Dn~~~A~~iA~~lGId~--------------------------------------------------------------- 578 (713)
T COG2217 562 DNRRTAEAIAKELGIDE--------------------------------------------------------------- 578 (713)
T ss_pred CCHHHHHHHHHHcChHh---------------------------------------------------------------
Confidence 99999999999999821
Q ss_pred CCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 041225 423 GHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVS 502 (658)
Q Consensus 423 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~ 502 (658)
+.....|++|...|+.|++. +..|+|+|||.||.|
T Consensus 579 --------------------------------------------v~AellPedK~~~V~~l~~~-g~~VamVGDGINDAP 613 (713)
T COG2217 579 --------------------------------------------VRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAP 613 (713)
T ss_pred --------------------------------------------heccCCcHHHHHHHHHHHhc-CCEEEEEeCCchhHH
Confidence 46778899999999999987 589999999999999
Q ss_pred hhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 503 MIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWY 571 (658)
Q Consensus 503 Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~ 571 (658)
+|..||+|||| |.+.+.++++||+++.+.+......++ .+|....+++..+.|.|.+|.+++.+..+.
T Consensus 614 ALA~AdVGiAm-G~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 614 ALAAADVGIAM-GSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHhhcCeeEee-cCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999 667777999999999999998888777 799999999999999999999887665443
No 26
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-36 Score=305.93 Aligned_cols=346 Identities=21% Similarity=0.291 Sum_probs=262.9
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEE--E--EEcCcccCCchhhHHHHHHHHHhhhccccccccCh
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQR--A--SVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDS 97 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (658)
.+++++++++++++|+|+.++++|||||||||-|++++.+ + +..|.+ +
T Consensus 308 LaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~----------------------------~ 359 (942)
T KOG0205|consen 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVD----------------------------K 359 (942)
T ss_pred HHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCC----------------------------h
Confidence 4578999999999999999999999999999999999987 2 332311 0
Q ss_pred HHHHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEE
Q 041225 98 KLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFER 177 (658)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~ 177 (658)
..+++..+... ...+.+.+|.|++...++-
T Consensus 360 ------------------D~~~L~A~rAs-------------------------r~en~DAID~A~v~~L~dP------- 389 (942)
T KOG0205|consen 360 ------------------DDVLLTAARAS-------------------------RKENQDAIDAAIVGMLADP------- 389 (942)
T ss_pred ------------------HHHHHHHHHHh-------------------------hhcChhhHHHHHHHhhcCH-------
Confidence 01112111111 1123478899998875431
Q ss_pred cCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhh
Q 041225 178 TSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSS 257 (658)
Q Consensus 178 ~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (658)
...+-.++.++.+||++..||....+.+++|+.+..+||||+.|++.|.... .+++..-..+++|++
T Consensus 390 ---------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~----~i~~~vh~~id~~Ae 456 (942)
T KOG0205|consen 390 ---------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH----DIPERVHSIIDKFAE 456 (942)
T ss_pred ---------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC----cchHHHHHHHHHHHH
Confidence 1233467889999999999999999999999999999999999999998643 467788888899999
Q ss_pred cCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeE
Q 041225 258 QGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKV 337 (658)
Q Consensus 258 ~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v 337 (658)
+|+|.+++|++..++..-. .-..-..++|..-+-|+++.++.++|++....|+.|
T Consensus 457 RGlRSLgVArq~v~e~~~~-------------------------~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~V 511 (942)
T KOG0205|consen 457 RGLRSLAVARQEVPEKTKE-------------------------SPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNV 511 (942)
T ss_pred hcchhhhhhhhcccccccc-------------------------CCCCCcccccccccCCCCccchHHHHHHHHhcccee
Confidence 9999999999988765210 011234788888889999999999999999999999
Q ss_pred EEEecCChhHHHHHHHHcCccCC---CccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcC
Q 041225 338 WVLTGDKQDTAISIALSCKLLTP---DMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISND 414 (658)
Q Consensus 338 ~i~TGr~~~~a~~ia~~~gl~~~---~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (658)
-|+|||...-+...++++|+-.. ....+..++.
T Consensus 512 kmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~-------------------------------------------- 547 (942)
T KOG0205|consen 512 KMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKD-------------------------------------------- 547 (942)
T ss_pred eeecchHHHHHHhhhhhhccccCcCCchhhccCCCC--------------------------------------------
Confidence 99999999999999999987432 0100000000
Q ss_pred CCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEE
Q 041225 415 AKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAI 494 (658)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~ai 494 (658)
.. ..+....+.+++ .-=+..+-|.+|..+|+.|+++ +..+.+.
T Consensus 548 -------~~---------------~~~~~v~elie~--------------adgfAgVfpehKy~iV~~Lq~r-~hi~gmt 590 (942)
T KOG0205|consen 548 -------GS---------------MPGSPVDELIEK--------------ADGFAGVFPEHKYEIVKILQER-KHIVGMT 590 (942)
T ss_pred -------CC---------------CCCCcHHHHhhh--------------ccCccccCHHHHHHHHHHHhhc-Cceeccc
Confidence 00 000011111111 1125667799999999999998 6899999
Q ss_pred cCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHH
Q 041225 495 GDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFV 565 (658)
Q Consensus 495 GDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~ 565 (658)
|||.||.|+|+.||+|||+ ..+.+.+..+||+|+.......++..+ .+|.+|+|++.+..|.+.-.+-+.
T Consensus 591 gdgvndapaLKkAdigiav-a~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv 661 (942)
T KOG0205|consen 591 GDGVNDAPALKKADIGIAV-ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661 (942)
T ss_pred CCCcccchhhcccccceee-ccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH
Confidence 9999999999999999999 556667899999999999988888766 899999999999888776665444
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=9.7e-35 Score=327.30 Aligned_cols=289 Identities=21% Similarity=0.256 Sum_probs=223.2
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++||++|+..++|+|+++++||||||||||+|+|+|.++...+.. .
T Consensus 418 ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-~-------------------------------- 464 (741)
T PRK11033 418 ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI-S-------------------------------- 464 (741)
T ss_pred HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC-C--------------------------------
Confidence 4779999999999999999999999999999999999998653311 0
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
..+++...+ ..+..+.||.++|+++++...+..
T Consensus 465 ------------~~~~l~~aa--------------------------~~e~~s~hPia~Ai~~~a~~~~~~--------- 497 (741)
T PRK11033 465 ------------ESELLALAA--------------------------AVEQGSTHPLAQAIVREAQVRGLA--------- 497 (741)
T ss_pred ------------HHHHHHHHH--------------------------HHhcCCCCHHHHHHHHHHHhcCCC---------
Confidence 011111111 112234699999999999876543
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeE-EEEE-cCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCC
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMS-VVIR-FPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGL 260 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~ms-viv~-~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 260 (658)
+||.++++.+. .-++ .-+|.. +.-|+++.+.+ ..+.+...++.+..+|.
T Consensus 498 ----------------~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~-----------~~~~~~~~~~~~~~~g~ 548 (741)
T PRK11033 498 ----------------IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP-----------LADAFAGQINELESAGK 548 (741)
T ss_pred ----------------CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh-----------ccHHHHHHHHHHHhCCC
Confidence 23444444431 1111 112322 23477776643 11234445678889999
Q ss_pred eEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEE
Q 041225 261 RTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVL 340 (658)
Q Consensus 261 r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~ 340 (658)
+++++++ |++++|.++++|+++++++++|++|+++|++++|+
T Consensus 549 ~~v~va~--------------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~ll 590 (741)
T PRK11033 549 TVVLVLR--------------------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVML 590 (741)
T ss_pred EEEEEEE--------------------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEE
Confidence 9999984 57899999999999999999999999999999999
Q ss_pred ecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCC
Q 041225 341 TGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV 420 (658)
Q Consensus 341 TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (658)
|||+..++..+++++|+..
T Consensus 591 TGd~~~~a~~ia~~lgi~~------------------------------------------------------------- 609 (741)
T PRK11033 591 TGDNPRAAAAIAGELGIDF------------------------------------------------------------- 609 (741)
T ss_pred cCCCHHHHHHHHHHcCCCe-------------------------------------------------------------
Confidence 9999999999999999821
Q ss_pred CCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 041225 421 PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500 (658)
Q Consensus 421 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ND 500 (658)
.....|.+|..+++.+++. ..|+|+|||.||
T Consensus 610 -----------------------------------------------~~~~~p~~K~~~v~~l~~~--~~v~mvGDgiND 640 (741)
T PRK11033 610 -----------------------------------------------RAGLLPEDKVKAVTELNQH--APLAMVGDGIND 640 (741)
T ss_pred -----------------------------------------------ecCCCHHHHHHHHHHHhcC--CCEEEEECCHHh
Confidence 1235688999999999864 589999999999
Q ss_pred hhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLF 569 (658)
Q Consensus 501 i~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~ 569 (658)
.|||+.||+||+| +++.+.++++||+++.+.++.....++ .||..+.++++.+.|.+..|++++.+.+
T Consensus 641 apAl~~A~vgia~-g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 641 APAMKAASIGIAM-GSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred HHHHHhCCeeEEe-cCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 567777899999999988887777666 8999999999999999999987665543
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-33 Score=301.48 Aligned_cols=335 Identities=22% Similarity=0.225 Sum_probs=238.2
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
..+|+|+|..+.+|.+.+|++|+||||||||+|++.|.++...+....
T Consensus 564 A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~-------------------------------- 611 (951)
T KOG0207|consen 564 ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPIS-------------------------------- 611 (951)
T ss_pred hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCccc--------------------------------
Confidence 368999999999999999999999999999999999999877654311
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.++++-.. +..|..+.||...|+++||+......... ...-
T Consensus 612 ------------~~e~l~~v--------------------------~a~Es~SeHPig~AIv~yak~~~~~~~~~-~~~~ 652 (951)
T KOG0207|consen 612 ------------LKEALALV--------------------------AAMESGSEHPIGKAIVDYAKEKLVEPNPE-GVLS 652 (951)
T ss_pred ------------HHHHHHHH--------------------------HHHhcCCcCchHHHHHHHHHhcccccCcc-ccce
Confidence 11111111 22344567999999999999876111000 0000
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeE
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRT 262 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 262 (658)
+-..+|++ ....+.+. ..+ .+=|.-+-|...-.. ..+.++..+++....|..+
T Consensus 653 ~~~~pg~g---------------~~~~~~~~--~~~---i~iGN~~~~~r~~~~-------~~~~i~~~~~~~e~~g~tv 705 (951)
T KOG0207|consen 653 FEYFPGEG---------------IYVTVTVD--GNE---VLIGNKEWMSRNGCS-------IPDDILDALTESERKGQTV 705 (951)
T ss_pred eecccCCC---------------cccceEEe--eeE---EeechHHHHHhcCCC-------CchhHHHhhhhHhhcCceE
Confidence 11223332 11111111 000 112222222111111 1233555666666777777
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec
Q 041225 263 LVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 263 l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
.+++ .||++.|.++++|++|+++..+|..|++.|++++|+||
T Consensus 706 v~v~--------------------------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTG 747 (951)
T KOG0207|consen 706 VYVA--------------------------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTG 747 (951)
T ss_pred EEEE--------------------------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcC
Confidence 7666 68999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCC
Q 041225 343 DKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQ 422 (658)
Q Consensus 343 r~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (658)
|+..+|..+|+++|+
T Consensus 748 Dn~~aA~svA~~VGi----------------------------------------------------------------- 762 (951)
T KOG0207|consen 748 DNDAAARSVAQQVGI----------------------------------------------------------------- 762 (951)
T ss_pred CCHHHHHHHHHhhCc-----------------------------------------------------------------
Confidence 999999999999995
Q ss_pred CCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 041225 423 GHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVS 502 (658)
Q Consensus 423 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~ 502 (658)
..|.+...|.+|...|+.|++. ...|+|+|||.||.|
T Consensus 763 ------------------------------------------~~V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaP 799 (951)
T KOG0207|consen 763 ------------------------------------------DNVYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAP 799 (951)
T ss_pred ------------------------------------------ceEEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccH
Confidence 3378899999999999999998 578999999999999
Q ss_pred hhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 041225 503 MIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTS 581 (658)
Q Consensus 503 Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~ 581 (658)
+|..||+||+| +...+.|.++||+|+...+....+..+ .+|....|++..+.|.+.+|++.+.+.....+-.+ .--+
T Consensus 800 ALA~AdVGIai-g~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~-~~L~ 877 (951)
T KOG0207|consen 800 ALAQADVGIAI-GAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFG-IVLP 877 (951)
T ss_pred HHHhhccceee-ccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCc-cccC
Confidence 99999999999 555777999999999999998888877 69999999999999999999976655332211111 1123
Q ss_pred chhhHHHHHHHHHHhhhhhhhh
Q 041225 582 ALTDWSSVFYSLLYTSVPTIVV 603 (658)
Q Consensus 582 ~~~~~~~~~~n~~~~~~p~~~~ 603 (658)
|+..-..+..+.+...+..+.+
T Consensus 878 Pw~A~lama~SSvsVv~sSllL 899 (951)
T KOG0207|consen 878 PWMASLAMAASSVSVVLSSLLL 899 (951)
T ss_pred chHHHHHHHhhhHHHhhhHHHH
Confidence 3333334444545444555555
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=4.5e-34 Score=314.65 Aligned_cols=300 Identities=24% Similarity=0.297 Sum_probs=221.0
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
..++||++|+++++|.||++++||||||||||+|+|++.++...+....
T Consensus 227 ~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~------------------------------- 275 (556)
T TIGR01525 227 AARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASI------------------------------- 275 (556)
T ss_pred HHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCc-------------------------------
Confidence 3568899999999999999999999999999999999999875442110
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
...+++...+. .+..+.||.+.|+++++++.|..... +.
T Consensus 276 ------------~~~~~l~~a~~--------------------------~e~~~~hp~~~Ai~~~~~~~~~~~~~--~~- 314 (556)
T TIGR01525 276 ------------SEEELLALAAA--------------------------LEQSSSHPLARAIVRYAKKRGLELPK--QE- 314 (556)
T ss_pred ------------cHHHHHHHHHH--------------------------HhccCCChHHHHHHHHHHhcCCCccc--cc-
Confidence 00112221111 11234599999999999987654211 00
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
-...+.|.+ ++..++ |. .-+..|+++.+ + ... .........++.++.+|.|
T Consensus 315 ~~~~~~~~g-----------------i~~~~~---g~-~~~~lg~~~~~-~-~~~------~~~~~~~~~~~~~~~~g~~ 365 (556)
T TIGR01525 315 DVEEVPGKG-----------------VEATVD---GQ-EEVRIGNPRLL-E-LAA------EPISASPDLLNEGESQGKT 365 (556)
T ss_pred CeeEecCCe-----------------EEEEEC---Ce-eEEEEecHHHH-h-hcC------CCchhhHHHHHHHhhCCcE
Confidence 001111111 111111 10 12334554433 1 000 0111223456678889999
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcC-CeEEEE
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAG-IKVWVL 340 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~G-I~v~i~ 340 (658)
++.++ .||+++|.+.++++++|+++++|+.|+++| ++++|+
T Consensus 366 ~~~v~--------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~iv 407 (556)
T TIGR01525 366 VVFVA--------------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVML 407 (556)
T ss_pred EEEEE--------------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEE
Confidence 98887 367999999999999999999999999999 999999
Q ss_pred ecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCC
Q 041225 341 TGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV 420 (658)
Q Consensus 341 TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (658)
|||+..++..+++++|+..
T Consensus 408 Tgd~~~~a~~i~~~lgi~~------------------------------------------------------------- 426 (556)
T TIGR01525 408 TGDNRSAAEAVAAELGIDE------------------------------------------------------------- 426 (556)
T ss_pred eCCCHHHHHHHHHHhCCCe-------------------------------------------------------------
Confidence 9999999999999999821
Q ss_pred CCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 041225 421 PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500 (658)
Q Consensus 421 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ND 500 (658)
++.+..|.+|...++.++.. +++++++|||.||
T Consensus 427 ----------------------------------------------~f~~~~p~~K~~~v~~l~~~-~~~v~~vGDg~nD 459 (556)
T TIGR01525 427 ----------------------------------------------VHAELLPEDKLAIVKELQEE-GGVVAMVGDGIND 459 (556)
T ss_pred ----------------------------------------------eeccCCHHHHHHHHHHHHHc-CCEEEEEECChhH
Confidence 23345678999999999986 5799999999999
Q ss_pred hhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLF 569 (658)
Q Consensus 501 i~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~ 569 (658)
++|++.||+||++ +++.+.++..||+++.+.++.....++ .||..+.++++.+.|.+..|++.+.+.+
T Consensus 460 ~~al~~A~vgia~-g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 460 APALAAADVGIAM-GAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred HHHHhhCCEeEEe-CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 466667889999999998888777666 8999999999999999999998765544
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=2.2e-32 Score=300.12 Aligned_cols=287 Identities=26% Similarity=0.333 Sum_probs=214.1
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++||++|++.++|.||++++||||||||||+|+|++.++...+...
T Consensus 259 a~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~--------------------------------- 305 (562)
T TIGR01511 259 AKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRD--------------------------------- 305 (562)
T ss_pred HHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCC---------------------------------
Confidence 46899999999999999999999999999999999999986433110
Q ss_pred HhhccCcchhHHHHHHHH-HHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 103 LSKDLVGDERIAAHEFFL-TLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~-~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
..+++. +.++ +..+.||.+.|+++++++.|......++
T Consensus 306 ------------~~~~l~~aa~~---------------------------e~~s~HPia~Ai~~~~~~~~~~~~~~~~-- 344 (562)
T TIGR01511 306 ------------RTELLALAAAL---------------------------EAGSEHPLAKAIVSYAKEKGITLVEVSD-- 344 (562)
T ss_pred ------------HHHHHHHHHHH---------------------------hccCCChHHHHHHHHHHhcCCCcCCCCC--
Confidence 011111 1122 2234599999999999887654321111
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
+..+.|.+....+ ++ .-+..|+++.+.+.-.. +..+..+|.+
T Consensus 345 -~~~~~g~Gi~~~~--------------------~g--~~~~iG~~~~~~~~~~~---------------~~~~~~~g~~ 386 (562)
T TIGR01511 345 -FKAIPGIGVEGTV--------------------EG--TKIQLGNEKLLGENAIK---------------IDGKAEQGST 386 (562)
T ss_pred -eEEECCceEEEEE--------------------CC--EEEEEECHHHHHhCCCC---------------CChhhhCCCE
Confidence 2233444433221 11 22445776654321100 0012345666
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT 341 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T 341 (658)
++.+ +.|++++|.++++++++|+++++|++|+++|++++|+|
T Consensus 387 ~~~~--------------------------------------~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilS 428 (562)
T TIGR01511 387 SVLV--------------------------------------AVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLT 428 (562)
T ss_pred EEEE--------------------------------------EECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEc
Confidence 6544 46899999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCC
Q 041225 342 GDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVP 421 (658)
Q Consensus 342 Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (658)
||+...+..+++.+|+.
T Consensus 429 gd~~~~a~~ia~~lgi~--------------------------------------------------------------- 445 (562)
T TIGR01511 429 GDNRKTAKAVAKELGIN--------------------------------------------------------------- 445 (562)
T ss_pred CCCHHHHHHHHHHcCCc---------------------------------------------------------------
Confidence 99999999999999871
Q ss_pred CCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 041225 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV 501 (658)
Q Consensus 422 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi 501 (658)
++....|.+|...++.+++. +++|+++|||.||+
T Consensus 446 ---------------------------------------------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~ 479 (562)
T TIGR01511 446 ---------------------------------------------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDA 479 (562)
T ss_pred ---------------------------------------------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccH
Confidence 12233567899999999886 68999999999999
Q ss_pred hhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 502 SMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLF 569 (658)
Q Consensus 502 ~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~ 569 (658)
+|++.||+||+| +.+.+.++..||+++.+.+......++ .||..++++++.+.|.+..|++.+.+.+
T Consensus 480 ~al~~A~vgia~-g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 480 PALAQADVGIAI-GAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHHhhCCEEEEe-CCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 456666899999999877776666556 8999999999999999999997665544
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=5.6e-32 Score=311.32 Aligned_cols=294 Identities=20% Similarity=0.245 Sum_probs=224.1
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
..++||+||+++++|+||+++++|||||||||+|+|+|.++...+.. . +
T Consensus 498 ~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-~--------------------------~---- 546 (834)
T PRK10671 498 AAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-D--------------------------E---- 546 (834)
T ss_pred HHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC-C--------------------------H----
Confidence 34789999999999999999999999999999999999987643311 0 0
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
.+.+-.+.+++. .+.||.+.|+++++...... ..+
T Consensus 547 -------------~~~l~~a~~~e~---------------------------~s~hp~a~Ai~~~~~~~~~~--~~~--- 581 (834)
T PRK10671 547 -------------AQALRLAAALEQ---------------------------GSSHPLARAILDKAGDMTLP--QVN--- 581 (834)
T ss_pred -------------HHHHHHHHHHhC---------------------------CCCCHHHHHHHHHHhhCCCC--Ccc---
Confidence 011112233322 24599999999988643211 000
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
-+..+.|.+.+.. .+|. .+..|+++.+.+... ..+.+...++.+..+|.+
T Consensus 582 ~~~~~~g~Gv~~~--------------------~~g~--~~~~G~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~ 631 (834)
T PRK10671 582 GFRTLRGLGVSGE--------------------AEGH--ALLLGNQALLNEQQV--------DTKALEAEITAQASQGAT 631 (834)
T ss_pred cceEecceEEEEE--------------------ECCE--EEEEeCHHHHHHcCC--------ChHHHHHHHHHHHhCCCe
Confidence 0112233332211 1222 345688886643211 123345566778889999
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT 341 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T 341 (658)
++.+++ |++++|.+++.|+++|++.++|++|+++|++++|+|
T Consensus 632 ~v~va~--------------------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~T 673 (834)
T PRK10671 632 PVLLAV--------------------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLT 673 (834)
T ss_pred EEEEEE--------------------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEc
Confidence 988874 578999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCC
Q 041225 342 GDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVP 421 (658)
Q Consensus 342 Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (658)
||+..++..+++.+|+..
T Consensus 674 gd~~~~a~~ia~~lgi~~-------------------------------------------------------------- 691 (834)
T PRK10671 674 GDNPTTANAIAKEAGIDE-------------------------------------------------------------- 691 (834)
T ss_pred CCCHHHHHHHHHHcCCCE--------------------------------------------------------------
Confidence 999999999999999721
Q ss_pred CCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 041225 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV 501 (658)
Q Consensus 422 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi 501 (658)
++....|.+|..+++.++.. +++|+++|||.||+
T Consensus 692 ---------------------------------------------~~~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~ 725 (834)
T PRK10671 692 ---------------------------------------------VIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDA 725 (834)
T ss_pred ---------------------------------------------EEeCCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHH
Confidence 23445688999999999987 67999999999999
Q ss_pred hhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 502 SMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLML 568 (658)
Q Consensus 502 ~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~ 568 (658)
+|++.||+||+| |++.+.++++||+++.+.++.....++ .||..+.++++.+.|.+.+|++.+.+.
T Consensus 726 ~al~~Agvgia~-g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a 792 (834)
T PRK10671 726 PALAQADVGIAM-GGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIA 792 (834)
T ss_pred HHHHhCCeeEEe-cCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 677778999999999998888777666 799999999999999999998776544
No 32
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.98 E-value=1.1e-30 Score=285.93 Aligned_cols=280 Identities=23% Similarity=0.273 Sum_probs=207.7
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
..++||++|+++++|+||+++++|||||||||+|+|++.++...
T Consensus 227 ~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------------ 270 (536)
T TIGR01512 227 AARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------------------------------ 270 (536)
T ss_pred HHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH------------------------------------
Confidence 45789999999999999999999999999999999999987420
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
+++...+. .+..+.||.+.|+++++.+.+ .+ .
T Consensus 271 ---------------~~l~~a~~--------------------------~e~~~~hp~~~Ai~~~~~~~~-~~------~ 302 (536)
T TIGR01512 271 ---------------EVLRLAAA--------------------------AEQASSHPLARAIVDYARKRE-NV------E 302 (536)
T ss_pred ---------------HHHHHHHH--------------------------HhccCCCcHHHHHHHHHHhcC-CC------c
Confidence 11111111 112345999999999998764 10 0
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
-....+|.+.+.. + +|.. +.-|+++.+.+.. ...+..+|.+
T Consensus 303 ~~~~~~g~gi~~~-----------------~---~g~~--~~ig~~~~~~~~~-----------------~~~~~~~~~~ 343 (536)
T TIGR01512 303 SVEEVPGEGVRAV-----------------V---DGGE--VRIGNPRSLEAAV-----------------GARPESAGKT 343 (536)
T ss_pred ceEEecCCeEEEE-----------------E---CCeE--EEEcCHHHHhhcC-----------------CcchhhCCCe
Confidence 1122233322211 1 1221 2246654331110 0033445655
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCC-eEEEE
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGI-KVWVL 340 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI-~v~i~ 340 (658)
++.++ .|++++|.+.++++++|++.++|++|+++|+ +++|+
T Consensus 344 ~~~v~--------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vv 385 (536)
T TIGR01512 344 IVHVA--------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVML 385 (536)
T ss_pred EEEEE--------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEE
Confidence 54443 4789999999999999999999999999999 99999
Q ss_pred ecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCC
Q 041225 341 TGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV 420 (658)
Q Consensus 341 TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (658)
|||+..++..+++++|+..
T Consensus 386 Tgd~~~~a~~i~~~lgi~~------------------------------------------------------------- 404 (536)
T TIGR01512 386 TGDRRAVAERVARELGIDE------------------------------------------------------------- 404 (536)
T ss_pred cCCCHHHHHHHHHHcCChh-------------------------------------------------------------
Confidence 9999999999999999821
Q ss_pred CCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 041225 421 PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500 (658)
Q Consensus 421 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ND 500 (658)
++....|.+|...++.++.. +++|+++|||.||
T Consensus 405 ----------------------------------------------~f~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD 437 (536)
T TIGR01512 405 ----------------------------------------------VHAELLPEDKLEIVKELREK-YGPVAMVGDGIND 437 (536)
T ss_pred ----------------------------------------------hhhccCcHHHHHHHHHHHhc-CCEEEEEeCCHHH
Confidence 12344578999999999887 5899999999999
Q ss_pred hhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFW 570 (658)
Q Consensus 501 i~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~ 570 (658)
++|++.||+||++..++.+.++.+||+++.+.++.....++ .||..+.++++.+.|.+..|++.+.+.++
T Consensus 438 ~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 438 APALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred HHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999994255667899999999776666665544 89999999999999999999877655543
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1.2e-28 Score=246.81 Aligned_cols=369 Identities=20% Similarity=0.243 Sum_probs=264.4
Q ss_pred CCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHH
Q 041225 21 SSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLM 100 (658)
Q Consensus 21 ~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (658)
...+-|++.++..++|..|.||++..|||||+|-|+-.-...+..+..
T Consensus 279 Rv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv-------------------------------- 326 (681)
T COG2216 279 RVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGV-------------------------------- 326 (681)
T ss_pred HhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCC--------------------------------
Confidence 344568999999999999999999999999999876554444433221
Q ss_pred HHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCC
Q 041225 101 ELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSG 180 (658)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~ 180 (658)
..+++..+..+++ +....|..+.++++|++.|+.+.....
T Consensus 327 -------------~~~~la~aa~lsS--------------------------l~DeTpEGrSIV~LA~~~~~~~~~~~~- 366 (681)
T COG2216 327 -------------SEEELADAAQLAS--------------------------LADETPEGRSIVELAKKLGIELREDDL- 366 (681)
T ss_pred -------------CHHHHHHHHHHhh--------------------------hccCCCCcccHHHHHHHhccCCCcccc-
Confidence 1233444444432 112378889999999999855432211
Q ss_pred eEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCC
Q 041225 181 HIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGL 260 (658)
Q Consensus 181 ~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 260 (658)
.. --...||+.+.|..++-.. ++ +-+-|||.+.+........ ...++.++..+++-++.|=
T Consensus 367 ---------~~---~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~---g~~p~~l~~~~~~vs~~GG 427 (681)
T COG2216 367 ---------QS---HAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERG---GHIPEDLDAAVDEVSRLGG 427 (681)
T ss_pred ---------cc---cceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcC---CCCCHHHHHHHHHHHhcCC
Confidence 00 1235689888765555433 22 5678999999999887432 2356677888888999999
Q ss_pred eEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEE
Q 041225 261 RTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVL 340 (658)
Q Consensus 261 r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~ 340 (658)
..|+++ .|+.++|.+.++|-++|+.+|-+.+||+.||+.+||
T Consensus 428 TPL~V~--------------------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~ 469 (681)
T COG2216 428 TPLVVV--------------------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMI 469 (681)
T ss_pred CceEEE--------------------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEE
Confidence 998887 478999999999999999999999999999999999
Q ss_pred ecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCC
Q 041225 341 TGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV 420 (658)
Q Consensus 341 TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (658)
|||++-||..||.+.|+..
T Consensus 470 TGDN~~TAa~IA~EAGVDd------------------------------------------------------------- 488 (681)
T COG2216 470 TGDNPLTAAAIAAEAGVDD------------------------------------------------------------- 488 (681)
T ss_pred eCCCHHHHHHHHHHhCchh-------------------------------------------------------------
Confidence 9999999999999999732
Q ss_pred CCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 041225 421 PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500 (658)
Q Consensus 421 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ND 500 (658)
.-+.++|++|...|+.-+.. +.-|+|+|||.||
T Consensus 489 ----------------------------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTND 521 (681)
T COG2216 489 ----------------------------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTND 521 (681)
T ss_pred ----------------------------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCc
Confidence 13567899999999999987 6899999999999
Q ss_pred hhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhc
Q 041225 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNA---VFVLMLFWYILFTG 576 (658)
Q Consensus 501 i~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~ 576 (658)
.|+|..||+|+|| ++..+.+|++++.|-.|-+..+.+..+ -|+...-.-..+..|++..-+ ..++|..|+.++..
T Consensus 522 APALAqAdVg~AM-NsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~ 600 (681)
T COG2216 522 APALAQADVGVAM-NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQ 600 (681)
T ss_pred chhhhhcchhhhh-ccccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhccc
Confidence 9999999999999 777778999999998888887777666 476554433333334433322 23345555544411
Q ss_pred ------cccccchhhHH-HHHHHHH--HhhhhhhhheecccCCChHHHhhCCc-ccccccc
Q 041225 577 ------FSTTSALTDWS-SVFYSLL--YTSVPTIVVGIVDKDLSHKTLMQYPK-LYVVQQY 627 (658)
Q Consensus 577 ------~s~~~~~~~~~-~~~~n~~--~~~~p~~~~~~~~~~~~~~~~~~~p~-~y~~~~~ 627 (658)
..-.+|.+... -+.||.+ ..++|.-.-|+-.++.+...+++..- .|-.|..
T Consensus 601 l~~lNiM~L~sP~SAilSAlIfNAlIIv~LIPLAlkGVkyk~~~a~~lL~rNl~iYGlGGl 661 (681)
T COG2216 601 LGALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYKPLSASALLRRNLLIYGLGGL 661 (681)
T ss_pred ccceeecccCCcHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHhhCeEEEecCce
Confidence 11122333332 2345543 34566667778889998887776544 4777654
No 34
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.92 E-value=1.8e-24 Score=218.16 Aligned_cols=229 Identities=17% Similarity=0.144 Sum_probs=146.0
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC-------CCcc--------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT-------PDMQ-------- 363 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~-------~~~~-------- 363 (658)
+++++|+|||||+. +..+++.++++|++++++|++|+++|||++..+..+.+.+++.. .++.
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~ 80 (270)
T PRK10513 4 KLIAIDMDGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADG 80 (270)
T ss_pred EEEEEecCCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCC
Confidence 45789999999987 55899999999999999999999999999999999999988632 2222
Q ss_pred -EEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccc-h-hHHHHHHhhcCCCCCC-CCCCCchhhhhccCcEEEEE
Q 041225 364 -QIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR-S-AEIEYLAISNDAKFSD-VPQGHDVKEVAAIASLALII 439 (658)
Q Consensus 364 -~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 439 (658)
++.....+.+.+.++++..++. ............+... . .......... ..... ..............++. +.
T Consensus 81 ~~i~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~~-~~ 157 (270)
T PRK10513 81 ETVAQTALSYDDYLYLEKLSREV-GVHFHALDRNTLYTANRDISYYTVHESFL-TGIPLVFREVEKMDPNLQFPKVM-MI 157 (270)
T ss_pred CEEEecCCCHHHHHHHHHHHHHc-CCcEEEEECCEEEEecCCcchhHHHhhhh-ccCCccccchhhccccCCceEEE-Ee
Confidence 2333344778888888776653 1111111111111110 0 0010000000 00000 00000000011122222 33
Q ss_pred eCccHHHHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEe
Q 041225 440 DGNSLVYILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 440 ~~~~~~~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
...+....+...+...+ ..+..+.+.++++.+.+++|+.+++.|+++ +.++|+|||||.||++||+.||+||||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm 237 (270)
T PRK10513 158 DEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM 237 (270)
T ss_pred CCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe
Confidence 33322222222333221 234556677899999999999999999988 668899999999999999999999999
Q ss_pred cCccchhhhhhcccccccccc
Q 041225 514 CGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 514 ~~~~~~~~k~~AD~vl~~~~~ 534 (658)
+|+.+.+|++||+|+.+.+.
T Consensus 238 -~NA~~~vK~~A~~vt~~n~~ 257 (270)
T PRK10513 238 -GNAIPSVKEVAQFVTKSNLE 257 (270)
T ss_pred -cCccHHHHHhcCeeccCCCc
Confidence 77888899999999876544
No 35
>PRK10976 putative hydrolase; Provisional
Probab=99.91 E-value=5.3e-24 Score=214.21 Aligned_cols=230 Identities=16% Similarity=0.149 Sum_probs=146.7
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC----Cc--------cEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP----DM--------QQII 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~----~~--------~~i~ 366 (658)
+++++|+|||||+. +..+++.+.++|++++++|++|+++|||++..+..+.+.+++..+ +| ++++
T Consensus 3 kli~~DlDGTLl~~---~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~ 79 (266)
T PRK10976 3 QVVASDLDGTLLSP---DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIF 79 (266)
T ss_pred eEEEEeCCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEeh
Confidence 35679999999987 457999999999999999999999999999999999988886322 22 2333
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCccccccccccc-hhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHH
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR-SAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLV 445 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 445 (658)
...++.+.+.++++..++..............+... ..............+.. ...... ......++.+.....+..
T Consensus 80 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~ki~~~~~~~~~~ 157 (266)
T PRK10976 80 SHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQL-YEPGLL-EPDGVSKVFFTCDSHEKL 157 (266)
T ss_pred hhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCccee-echhhc-ccCCceEEEEEcCCHHHH
Confidence 344578888888887754322111111111111111 11111111111111100 000000 111233333333222222
Q ss_pred HHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccch
Q 041225 446 YILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGR 519 (658)
Q Consensus 446 ~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~ 519 (658)
..+.+.+...+ ..+..+.+.++++.+.+++|+.+++.|+++ +.++|+|||||.||++||+.||+|||| +|+.+
T Consensus 158 ~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm-~NA~~ 236 (266)
T PRK10976 158 LPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM-GNAHQ 236 (266)
T ss_pred HHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee-cCCcH
Confidence 22333333322 234455667899999999999999999988 668899999999999999999999999 78888
Q ss_pred hhhhhcc--cccccccc
Q 041225 520 QAVMASD--FAMGQFRF 534 (658)
Q Consensus 520 ~~k~~AD--~vl~~~~~ 534 (658)
.+|++|| +|+.+.+-
T Consensus 237 ~vK~~A~~~~v~~~n~e 253 (266)
T PRK10976 237 RLKDLLPELEVIGSNAD 253 (266)
T ss_pred HHHHhCCCCeecccCch
Confidence 8999988 66665443
No 36
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.90 E-value=5.2e-23 Score=207.52 Aligned_cols=227 Identities=14% Similarity=0.095 Sum_probs=146.5
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC----C--------ccEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP----D--------MQQII 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~----~--------~~~i~ 366 (658)
+++++|+|||||+. +..++++++++|++|+++|++|+++|||++..+..+.+++++..+ + +++++
T Consensus 3 kli~~DlDGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~ 79 (272)
T PRK15126 3 RLAAFDMDGTLLMP---DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLH 79 (272)
T ss_pred cEEEEeCCCcCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEE
Confidence 35689999999986 558999999999999999999999999999999999998886322 2 23344
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCcccccccccc-chhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHH
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLK-RSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLV 445 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 445 (658)
...++.+.+.++++..... ............+.. ...............+. ....... ......++. +...+...
T Consensus 80 ~~~i~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~ki~-~~~~~~~~ 155 (272)
T PRK15126 80 RQDLPADVAELVLHQQWDT-RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQ-LIDLKRL-PAHGVTKIC-FCGDHDDL 155 (272)
T ss_pred eecCCHHHHHHHHHHhhhc-CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceE-EecHHHc-cccCceEEE-EECCHHHH
Confidence 4556888999998877653 111111110111111 11111111111111110 0000000 001223333 33333332
Q ss_pred HHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccch
Q 041225 446 YILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGR 519 (658)
Q Consensus 446 ~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~ 519 (658)
..+...+...+ ..+..+...++++.+.+++|+.+|+.|+++ +.++|+|||||.||++||+.|++|||| +|+.+
T Consensus 156 ~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~Na~~ 234 (272)
T PRK15126 156 TRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM-GNAMP 234 (272)
T ss_pred HHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec-cCChH
Confidence 33333343322 234455567899999999999999999988 567899999999999999999999999 77888
Q ss_pred hhhhhccc--cccccc
Q 041225 520 QAVMASDF--AMGQFR 533 (658)
Q Consensus 520 ~~k~~AD~--vl~~~~ 533 (658)
++|++||+ ++.+.+
T Consensus 235 ~vK~~A~~~~v~~~n~ 250 (272)
T PRK15126 235 QLRAELPHLPVIGHCR 250 (272)
T ss_pred HHHHhCCCCeecCCCc
Confidence 89999997 555543
No 37
>PLN02887 hydrolase family protein
Probab=99.89 E-value=4.1e-23 Score=223.01 Aligned_cols=235 Identities=16% Similarity=0.182 Sum_probs=151.0
Q ss_pred HHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC---------------
Q 041225 296 LRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP--------------- 360 (658)
Q Consensus 296 ~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~--------------- 360 (658)
...+++++|+|||||+. +..+++.++++|++++++|++|++||||++..+..+.+.+++...
T Consensus 306 ~~iKLIa~DLDGTLLn~---d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NG 382 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNS---KSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQG 382 (580)
T ss_pred cCccEEEEeCCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecC
Confidence 34567899999999986 558999999999999999999999999999999999888765311
Q ss_pred ------CccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccccccc-chhHHHHHHhhc-CCCCCCCCCCCchhhhhcc
Q 041225 361 ------DMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLK-RSAEIEYLAISN-DAKFSDVPQGHDVKEVAAI 432 (658)
Q Consensus 361 ------~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 432 (658)
++++++...++.+.+.++++...+. .+..........+.. ............ ...................
T Consensus 383 A~I~d~~g~~I~~~~L~~e~v~eIi~~~~~~-~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i 461 (580)
T PLN02887 383 LLVYGRQGREIYRSNLDQEVCREACLYSLEH-KIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADI 461 (580)
T ss_pred eEEEECCCcEEEEEeCCHHHHHHHHHHHHHc-CCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCe
Confidence 2334444556889999999877653 111111111111111 111111111100 0000000000111011122
Q ss_pred CcEEEEEeCccHHHHHHHhhHHh---hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhh
Q 041225 433 ASLALIIDGNSLVYILEKDLESD---LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQM 506 (658)
Q Consensus 433 ~~~~l~~~~~~~~~~~~~~~~~~---~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~ 506 (658)
.++.+....+.....+.+.+... ...++.+.+.++++.+.+++|+.+|+.|+++ +.++|+|||||.||++||+.
T Consensus 462 ~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~ 541 (580)
T PLN02887 462 QKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQL 541 (580)
T ss_pred eEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHH
Confidence 23332222222222233333322 2345566677899999999999999999998 56789999999999999999
Q ss_pred cceeEEecCccchhhhhhcccccccccch
Q 041225 507 ADVGVGICGQEGRQAVMASDFAMGQFRFL 535 (658)
Q Consensus 507 A~vgIam~~~~~~~~k~~AD~vl~~~~~l 535 (658)
||+|||| +|+.+.+|++||+|+.+.+--
T Consensus 542 AG~gVAM-gNA~eeVK~~Ad~VT~sNdED 569 (580)
T PLN02887 542 ASLGVAL-SNGAEKTKAVADVIGVSNDED 569 (580)
T ss_pred CCCEEEe-CCCCHHHHHhCCEEeCCCCcC
Confidence 9999999 788888999999998765443
No 38
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.89 E-value=5.7e-23 Score=206.36 Aligned_cols=233 Identities=18% Similarity=0.189 Sum_probs=148.6
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC-----------CccEEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP-----------DMQQIII 367 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~-----------~~~~i~~ 367 (658)
.++++|+||||++. ...+++.++++|++++++|++++++|||++..+..+.+++++..+ .++.++.
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~ 80 (264)
T COG0561 4 KLLAFDLDGTLLDS---NKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQ 80 (264)
T ss_pred eEEEEcCCCCccCC---CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEee
Confidence 45689999999998 557999999999999999999999999999999999999998532 2344445
Q ss_pred cCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHH
Q 041225 368 NGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYI 447 (658)
Q Consensus 368 ~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 447 (658)
...+.+.+.++++..+......................... ..................... ..+............
T Consensus 81 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 157 (264)
T COG0561 81 KPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFA--EARIGFANLSPVGREAAELED-NKIIALDKDHEILEE 157 (264)
T ss_pred ecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCccc--ccccccccccccccchhhcCc-ceEEEEecChHhHHH
Confidence 55588899999988865422222111111111111110000 000000000000000011111 122222222222222
Q ss_pred HHHhhHHh----hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchh
Q 041225 448 LEKDLESD----LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQ 520 (658)
Q Consensus 448 ~~~~~~~~----~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~ 520 (658)
....+... ...+..+.+..+++.+.+++|+.+++.|+++ +.++|+|||||.||++||+.|++|||| +|+.+.
T Consensus 158 ~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam-~Na~~~ 236 (264)
T COG0561 158 LVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM-GNADEE 236 (264)
T ss_pred HHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec-cCCCHH
Confidence 22233322 2334444455599999999999999999997 556899999999999999999999999 677888
Q ss_pred hhhhcccccccccchHHH
Q 041225 521 AVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 521 ~k~~AD~vl~~~~~l~~l 538 (658)
+|+.||++..+.+--...
T Consensus 237 ~k~~A~~vt~~n~~~Gv~ 254 (264)
T COG0561 237 LKELADYVTTSNDEDGVA 254 (264)
T ss_pred HHhhCCcccCCccchHHH
Confidence 999999776666544433
No 39
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.88 E-value=1.2e-22 Score=203.01 Aligned_cols=226 Identities=18% Similarity=0.205 Sum_probs=157.8
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc------------CCCccEEEEcC
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL------------TPDMQQIIING 369 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~------------~~~~~~i~~~g 369 (658)
++|+||||+.. ...++++++++|++|+++|++++++|||++..+..+...+++. ...+++++...
T Consensus 2 ~~DlDGTLl~~---~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~ 78 (254)
T PF08282_consen 2 FSDLDGTLLNS---DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKP 78 (254)
T ss_dssp EEECCTTTCST---TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEES
T ss_pred EEEECCceecC---CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhh
Confidence 58999999997 5579999999999999999999999999999999999988864 33555666777
Q ss_pred CCHHHHHHHHHHHHHhcCcccCccccccccccch--hHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHH
Q 041225 370 NSEEECKDLLADAKARYGVKSSNRTKCNSKLKRS--AEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYI 447 (658)
Q Consensus 370 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 447 (658)
++.+.+..+++.+.... ...........+.... ........... ..................++. +....+....
T Consensus 79 i~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~ki~-~~~~~~~~~~ 155 (254)
T PF08282_consen 79 IDSDDVKKILKYLKEHN-ISFFFYTDDDIYIYENKDEEELFFEHKFF-NFKESIVSEDDLEDEEIFKIL-FFPDPEDLEQ 155 (254)
T ss_dssp B-HHHHHHHHHHHHHTT-CEEEEEESSEEEESSTTCHHHHHHHHHHT-SCEEEESHHHHHHCSSESEEE-EESCHHHHHH
T ss_pred eeccchhheeehhhhcc-cccccccceeeecccccccchhhhhhccc-ccccccccccccccccceeee-ccccchhhhh
Confidence 79999999999998853 2221111112222222 11111111111 000000001111122334444 5555555555
Q ss_pred HHHhhHHhhh---hhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhh
Q 041225 448 LEKDLESDLF---DLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQA 521 (658)
Q Consensus 448 ~~~~~~~~~~---~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~ 521 (658)
+.+.+...+. ....+.+..+++.+.+++|+.+++.|+++ +.+++++|||+.||++||+.||+|||| +|+.+.+
T Consensus 156 l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am-~na~~~~ 234 (254)
T PF08282_consen 156 LREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM-GNATPEL 234 (254)
T ss_dssp HHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE-TTS-HHH
T ss_pred hhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE-cCCCHHH
Confidence 5666665543 45667788999999999999999999987 568999999999999999999999999 6777789
Q ss_pred hhhcccccccccc
Q 041225 522 VMASDFAMGQFRF 534 (658)
Q Consensus 522 k~~AD~vl~~~~~ 534 (658)
+..||+++...+-
T Consensus 235 k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 235 KKAADYITPSNND 247 (254)
T ss_dssp HHHSSEEESSGTC
T ss_pred HHhCCEEecCCCC
Confidence 9999999877654
No 40
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.86 E-value=2e-21 Score=196.41 Aligned_cols=231 Identities=16% Similarity=0.160 Sum_probs=144.1
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC-------------CccEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP-------------DMQQI 365 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~-------------~~~~i 365 (658)
+++++|+||||++. +..++++++++|++++++|++|++||||++..+..+++.+++..+ +++++
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l 80 (272)
T PRK10530 4 RVIALDLDGTLLTP---KKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVL 80 (272)
T ss_pred cEEEEeCCCceECC---CCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEE
Confidence 45789999999986 557999999999999999999999999999999999988876322 23445
Q ss_pred EEcCCCHHHHHHHHHHHHHhcCcccCccccccccccch-hHHHHHH-hhcCCC---CCCCCCCCchhhh-hc-cCcEEEE
Q 041225 366 IINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRS-AEIEYLA-ISNDAK---FSDVPQGHDVKEV-AA-IASLALI 438 (658)
Q Consensus 366 ~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~---~~~~~~~~~~~~~-~~-~~~~~l~ 438 (658)
+...++.+.+.++++.+++.- ................ ....... ...... ........+.... .. .....+.
T Consensus 81 ~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 159 (272)
T PRK10530 81 EADPLPVQQALQVIEMLDEHQ-IHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFA 159 (272)
T ss_pred EecCCCHHHHHHHHHHHHhCC-cEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEE
Confidence 555668899999998887641 1110000000001110 0010000 000000 0000001111111 11 1122223
Q ss_pred EeCccH--HHHHHHhhHHhh-hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEE
Q 041225 439 IDGNSL--VYILEKDLESDL-FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVG 512 (658)
Q Consensus 439 ~~~~~~--~~~~~~~~~~~~-~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIa 512 (658)
...+.. ...+.+.+...+ .....+....+++.+.+.+|+.+++.++++ +.+++++||||.||++|++.||+|||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~va 239 (272)
T PRK10530 160 LTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVA 239 (272)
T ss_pred EecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEE
Confidence 332221 112222222221 222333445789999999999999999987 56789999999999999999999999
Q ss_pred ecCccchhhhhhcccccccccc
Q 041225 513 ICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 513 m~~~~~~~~k~~AD~vl~~~~~ 534 (658)
| +|+.+.+|+.||+++.+.+-
T Consensus 240 m-gna~~~lk~~Ad~v~~~n~~ 260 (272)
T PRK10530 240 M-GNADDAVKARADLVIGDNTT 260 (272)
T ss_pred e-cCchHHHHHhCCEEEecCCC
Confidence 9 56777889999999876544
No 41
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.86 E-value=2.7e-21 Score=193.33 Aligned_cols=226 Identities=18% Similarity=0.179 Sum_probs=148.2
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC------------CccEEEEc
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP------------DMQQIIIN 368 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~------------~~~~i~~~ 368 (658)
+++|+||||+.. ...+++++.++|++|+++|++++++|||++..+..+..++++..+ +++++...
T Consensus 2 i~~DlDGTLl~~---~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~ 78 (256)
T TIGR00099 2 IFIDLDGTLLND---DHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKK 78 (256)
T ss_pred EEEeCCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeec
Confidence 468999999986 457999999999999999999999999999999999888876322 23455566
Q ss_pred CCCHHHHHHHHHHHHHhcCcccCccccccccccc--hhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHH
Q 041225 369 GNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR--SAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVY 446 (658)
Q Consensus 369 g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 446 (658)
.++.+.++++++.+.+.. ...........+... ....................... .......+.++........
T Consensus 79 ~i~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 155 (256)
T TIGR00099 79 PLDLDLVEEILNFLKKHG-LDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQY--LPDDILKILLLFLDPEDLD 155 (256)
T ss_pred CCCHHHHHHHHHHHHHcC-cEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchh--hhcccceEEEEECCHHHHH
Confidence 678899999999887642 111111111111111 11111111111111100111000 0111223333333333333
Q ss_pred HHHHhhHH----hhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccch
Q 041225 447 ILEKDLES----DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGR 519 (658)
Q Consensus 447 ~~~~~~~~----~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~ 519 (658)
.+.+.+.. ....+..+.+.++++.+.+++|+.+++.++++ +.+++++|||+.||++||+.|++|+|| +++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~-~na~~ 234 (256)
T TIGR00099 156 LLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM-GNADE 234 (256)
T ss_pred HHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe-cCchH
Confidence 33333331 12334556677899999999999999999987 567899999999999999999999999 66777
Q ss_pred hhhhhccccccccc
Q 041225 520 QAVMASDFAMGQFR 533 (658)
Q Consensus 520 ~~k~~AD~vl~~~~ 533 (658)
.+|..|++++.+.+
T Consensus 235 ~~k~~a~~~~~~n~ 248 (256)
T TIGR00099 235 ELKALADYVTDSNN 248 (256)
T ss_pred HHHHhCCEEecCCC
Confidence 89999999987644
No 42
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.83 E-value=1.2e-20 Score=183.79 Aligned_cols=98 Identities=35% Similarity=0.572 Sum_probs=88.9
Q ss_pred ccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHH
Q 041225 305 CDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKA 384 (658)
Q Consensus 305 ~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~ 384 (658)
.++++++...+.+++++++.++|+.|+++|++++|+|||+..++..+++.+|+..
T Consensus 114 ~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~------------------------- 168 (215)
T PF00702_consen 114 VNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD------------------------- 168 (215)
T ss_dssp ESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-------------------------
T ss_pred ecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-------------------------
Confidence 4799999999999999999999999999999999999999999999999999821
Q ss_pred hcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCC
Q 041225 385 RYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCR 464 (658)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~ 464 (658)
T Consensus 169 -------------------------------------------------------------------------------- 168 (215)
T PF00702_consen 169 -------------------------------------------------------------------------------- 168 (215)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEEEEc--CcccH--HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcc
Q 041225 465 VVLCCRV--APLQK--AGIVDLIKSRTDDMTLAIGDGANDVSMIQMAD 508 (658)
Q Consensus 465 ~~i~~~~--~~~~K--~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~ 508 (658)
..++.+. +|.+| ..+++.|+.. +..|+|+|||.||++|++.||
T Consensus 169 ~~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 169 SIVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred ccccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 3467777 99999 8999998855 469999999999999999997
No 43
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.83 E-value=2.2e-20 Score=187.79 Aligned_cols=219 Identities=16% Similarity=0.153 Sum_probs=136.8
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc-----CCCccEEE-------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL-----TPDMQQII------- 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~-----~~~~~~i~------- 366 (658)
.++++|+|||||+. +..+++.++++|++|+++|++++++|||++..+..+++++|+. ..+|..++
T Consensus 8 ~lI~~DlDGTLL~~---~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~ 84 (271)
T PRK03669 8 LLIFTDLDGTLLDS---HTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQD 84 (271)
T ss_pred eEEEEeCccCCcCC---CCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccC
Confidence 45789999999986 4568889999999999999999999999999999999999863 23444443
Q ss_pred -------EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE
Q 041225 367 -------INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII 439 (658)
Q Consensus 367 -------~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 439 (658)
..+.+.+.+.++++..++.......... .. . ....... ....... .............+..
T Consensus 85 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~--~~--~-~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~ 152 (271)
T PRK03669 85 HPDFPRIISGISHGEIRQVLNTLREKEGFKFTTFD--DV--D-DATIAEW---TGLSRSQ----AALARLHEASVTLIWR 152 (271)
T ss_pred CCCceEeecCCCHHHHHHHHHHHHHhcCCceeecc--cC--C-HHHHHHH---hCCCHHH----HHHHhccccCceeEec
Confidence 2235778888888887654232211110 00 0 0000000 0000000 0000000111112222
Q ss_pred eCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc------CCCeEEEEcCCcCChhhhhhcceeEEe
Q 041225 440 DGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR------TDDMTLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~------~~~~v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
...+....+.+.+......+.. ...++++.+.+++|+.+++.|+++ +.++|+|||||.||++||+.||+||||
T Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~-~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM 231 (271)
T PRK03669 153 DSDERMAQFTARLAELGLQFVQ-GARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV 231 (271)
T ss_pred CCHHHHHHHHHHHHHCCCEEEe-cCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe
Confidence 2222222233333332233333 345789999999999999999986 357899999999999999999999999
Q ss_pred cCccchh-----hhhhccccccccc
Q 041225 514 CGQEGRQ-----AVMASDFAMGQFR 533 (658)
Q Consensus 514 ~~~~~~~-----~k~~AD~vl~~~~ 533 (658)
.++..+. .+..||++...-.
T Consensus 232 ~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (271)
T PRK03669 232 KGLNREGVHLQDDDPARVYRTQREG 256 (271)
T ss_pred cCCCCCCcccccccCCceEeccCCC
Confidence 5333221 3457888776543
No 44
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.83 E-value=3.9e-20 Score=182.01 Aligned_cols=196 Identities=20% Similarity=0.221 Sum_probs=128.4
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC--------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN-------- 370 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~-------- 370 (658)
+++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+++.+++.. .++..||.
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 4 KAIAIDIDGTITDK---DRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDG 77 (230)
T ss_pred eEEEEecCCCcCCC---CCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCC
Confidence 45679999999986 45799999999999999999999999999999999999988642 34444443
Q ss_pred ------CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccH
Q 041225 371 ------SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSL 444 (658)
Q Consensus 371 ------~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 444 (658)
+.+.+.++++.....+..... .+...... . ..... .+......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~--~----~~~~~-~~~~~~~~ 126 (230)
T PRK01158 78 KRIFLGDIEECEKAYSELKKRFPEAST------------------------SLTKLDPD--Y----RKTEV-ALRRTVPV 126 (230)
T ss_pred CEEEEcchHHHHHHHHHHHHhccccce------------------------eeecCCcc--c----cccee-eecccccH
Confidence 112333444433322110000 00000000 0 00001 11111111
Q ss_pred HHHHHHhhHHhh--hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccch
Q 041225 445 VYILEKDLESDL--FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGR 519 (658)
Q Consensus 445 ~~~~~~~~~~~~--~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~ 519 (658)
....+.+.... ..+.. ....+++.+.+++|+.+++.++++ +++++++||||.||++||+.|++|||| +|+.+
T Consensus 127 -~~~~~~l~~~~~~~~~~~-~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam-~Na~~ 203 (230)
T PRK01158 127 -EEVRELLEELGLDLEIVD-SGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAV-ANADE 203 (230)
T ss_pred -HHHHHHHHHcCCcEEEEe-cceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEe-cCccH
Confidence 11222222111 11222 234689999999999999999987 567899999999999999999999999 77888
Q ss_pred hhhhhcccccccccc
Q 041225 520 QAVMASDFAMGQFRF 534 (658)
Q Consensus 520 ~~k~~AD~vl~~~~~ 534 (658)
.+|++||+|+.+.+-
T Consensus 204 ~vk~~a~~v~~~n~~ 218 (230)
T PRK01158 204 ELKEAADYVTEKSYG 218 (230)
T ss_pred HHHHhcceEecCCCc
Confidence 899999999876544
No 45
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.81 E-value=1e-19 Score=176.76 Aligned_cols=201 Identities=18% Similarity=0.183 Sum_probs=126.6
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHH-HHH
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEEC-KDL 378 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~-~~i 378 (658)
++++|+||||++. +..+++++.++|++|+++|++++++|||++..+..+++.+++.. .++..||.-.-.- ..+
T Consensus 3 ~v~~DlDGTLl~~---~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 3 LVAIDIDGTLTEP---NRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDI 76 (215)
T ss_pred EEEEecCCCcCCC---CcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcE
Confidence 4678999999986 45799999999999999999999999999999999999888632 3555555310000 000
Q ss_pred HHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhh
Q 041225 379 LADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFD 458 (658)
Q Consensus 379 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 458 (658)
. ... ..................... . .. ......+....... ..+...+......
T Consensus 77 ~----------~~~--------~~~~~~~~~~~~~~~~~~~~~--~---~~-~~~~~~~~~~~~~~-~~~~~~l~~~~~~ 131 (215)
T TIGR01487 77 F----------LAN--------MEEEWFLDEEKKKRFPRDRLS--N---EY-PRASLVIMREGKDV-DEVREIIKERGLN 131 (215)
T ss_pred E----------Eec--------ccchhhHHHhhhhhhhhhhcc--c---cc-ceeEEEEecCCccH-HHHHHHHHhCCeE
Confidence 0 000 000000000000000000000 0 00 00111222223222 2233333332223
Q ss_pred hhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccccccc
Q 041225 459 LATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFR 533 (658)
Q Consensus 459 i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~ 533 (658)
...+ ...+++.+.+.+|+.+++.++++ +.+++++||||.||++||+.|++|||| +|+.+++|+.||+++.+.+
T Consensus 132 ~~~~-~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam-~na~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 132 LVDS-GFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV-ANADDQLKEIADYVTSNPY 207 (215)
T ss_pred EEec-CceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc-CCccHHHHHhCCEEcCCCC
Confidence 3333 45689999999999999999987 456799999999999999999999999 7778889999999986543
No 46
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.80 E-value=1.9e-19 Score=176.57 Aligned_cols=205 Identities=17% Similarity=0.130 Sum_probs=123.5
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHH
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLAD 381 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~ 381 (658)
++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+++.+++. ..+|..||.-......
T Consensus 2 ~~DlDGTLl~~---~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~---- 71 (225)
T TIGR01482 2 ASDIDGTLTDP---NRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP---DPVIAENGGEISYNEG---- 71 (225)
T ss_pred eEeccCccCCC---CcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CeEEEecCcEEEeCCC----
Confidence 57999999986 4579999999999999999999999999999999999998852 3456666641000000
Q ss_pred HHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhh-h
Q 041225 382 AKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDL-A 460 (658)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i-~ 460 (658)
.. ....... ........................ .......+.... ... .....+....... .
T Consensus 72 -~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~ 134 (225)
T TIGR01482 72 -MD---------DIFLAYL-EEEWFLDIVIAKTFPFSRLKVQYP----RRASLVKMRYGI-DVD-TVREIIKELGLNLVA 134 (225)
T ss_pred -Cc---------eEEeccc-CHHHHHHHHHhcccchhhhccccc----cccceEEEeecC-CHH-HHHHHHHhcCceEEE
Confidence 00 0000000 000000000000000000000000 000111111111 111 1111111110111 1
Q ss_pred ccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccc
Q 041225 461 TSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 461 ~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~ 534 (658)
.+....+++.+.+.+|+.+++.++++ +.+++++|||+.||++||+.|++|||| +|+.+.+|+.||+|..+...
T Consensus 135 ~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam-~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 135 VDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAV-ANAQPELKEWADYVTESPYG 210 (225)
T ss_pred ecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEc-CChhHHHHHhcCeecCCCCC
Confidence 13456789999999999999999987 567899999999999999999999999 77777899999999865443
No 47
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.77 E-value=6e-18 Score=168.86 Aligned_cols=215 Identities=15% Similarity=0.080 Sum_probs=134.1
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc----CCCccEEE----------
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL----TPDMQQII---------- 366 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~----~~~~~~i~---------- 366 (658)
+++|+||||++. +....+.+.++|++|+++|++++++|||++..+..+.+++|+. ..+|..++
T Consensus 2 i~~DlDGTll~~---~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~ 78 (256)
T TIGR01486 2 IFTDLDGTLLDP---HGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPE 78 (256)
T ss_pred EEEcCCCCCcCC---CCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCC
Confidence 468999999985 3324557999999999999999999999999999999998863 23443333
Q ss_pred ----EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCc
Q 041225 367 ----INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGN 442 (658)
Q Consensus 367 ----~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 442 (658)
....+.+.++++++.............. ... ....... ...... ...........+.. +. ..
T Consensus 79 ~~~~~~~i~~~~~~~il~~~~~~~~~~~~~~~--~~~---~~~~~~~---~~~~~~----~~~~~~~~~~~~~~-~~-~~ 144 (256)
T TIGR01486 79 YPVIALGIPYEKIRARLEELSEELGFKFRGLG--DLT---DAEIAEL---TGLSRE----LAALAQRREYSETI-LW-SE 144 (256)
T ss_pred eEEEEcCCCHHHHHHHHHHHHHHhCCCccchh--hCC---HHHHHHH---hCcCHH----HHHHHhhCccCCce-ec-Ch
Confidence 3345677788888765443222111100 000 0000000 000000 00000001122222 22 33
Q ss_pred cHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---C--CCeEEEEcCCcCChhhhhhcceeEEecCcc
Q 041225 443 SLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---T--DDMTLAIGDGANDVSMIQMADVGVGICGQE 517 (658)
Q Consensus 443 ~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~--~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~ 517 (658)
+....+...+......+..+ ...+++.+.+.+|+.+++.++++ + .+++++||||.||++||+.||+|||| +|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~s-~~~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam-~Na 222 (256)
T TIGR01486 145 ERRERFTEALVELGLEVTHG-NRFYHVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV-PGP 222 (256)
T ss_pred HHHHHHHHHHHHcCCEEEeC-CceEEEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe-CCC
Confidence 33333333333322333333 35889999999999999999988 5 78899999999999999999999999 445
Q ss_pred c---hhhhhh--c-ccccccccc
Q 041225 518 G---RQAVMA--S-DFAMGQFRF 534 (658)
Q Consensus 518 ~---~~~k~~--A-D~vl~~~~~ 534 (658)
. +.+|+. | ++|..+.+.
T Consensus 223 ~~~~~~lk~~~~a~~~vt~~~~~ 245 (256)
T TIGR01486 223 NGPNVSLKPGDPGSFLLTPAPGP 245 (256)
T ss_pred CCCccccCccCCCcEEEcCCCCc
Confidence 4 468886 4 477765443
No 48
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.76 E-value=3.1e-18 Score=172.46 Aligned_cols=213 Identities=18% Similarity=0.151 Sum_probs=135.9
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC----CccEEE--------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP----DMQQII-------- 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~----~~~~i~-------- 366 (658)
+++++|+|||||+. ++.+.++++++|++|+++|++++++|||++..+..+++++|+..+ ++.+++
T Consensus 5 kli~~DlDGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~ 81 (273)
T PRK00192 5 LLVFTDLDGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPF 81 (273)
T ss_pred eEEEEcCcccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccccccc
Confidence 46789999999986 457888999999999999999999999999999999999987432 333333
Q ss_pred --------------EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhcc
Q 041225 367 --------------INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAI 432 (658)
Q Consensus 367 --------------~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (658)
..+.+.+.+.++++.+.+.+...... +.... ....... ...... ..........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~---~~~~~~~---~~~~~~----~~~~~~~~~~ 149 (273)
T PRK00192 82 QPDGERLKGDYWVIELGPPYEELREILDEISDELGYPLKG--FGDLS---AEEVAEL---TGLSGE----SARLAKDREF 149 (273)
T ss_pred CCccccccCCceEEEcCCCHHHHHHHHHHHHHHhCCCeee--hhhCC---HHHHHHH---hCcCHH----HHHHHHhccc
Confidence 33456778888887665543322111 00000 0000000 000000 0000000111
Q ss_pred CcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CC-CeEEEEcCCcCChhhhhhcc
Q 041225 433 ASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TD-DMTLAIGDGANDVSMIQMAD 508 (658)
Q Consensus 433 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~-~~v~aiGDg~NDi~Ml~~A~ 508 (658)
....+..........+...+......+.. ++.++++.+.+ +|+.+++.+.++ +. +.|++||||.||++|++.||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag 227 (273)
T PRK00192 150 SEPFLWNGSEAAKERFEEALKRLGLKVTR-GGRFLHLLGGG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAAD 227 (273)
T ss_pred CCceeecCchHHHHHHHHHHHHcCCEEEE-CCeEEEEeCCC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCC
Confidence 11222122333333334434332222333 35688999999 999999999987 67 89999999999999999999
Q ss_pred eeEEecCccchhhh----hhc-cccc
Q 041225 509 VGVGICGQEGRQAV----MAS-DFAM 529 (658)
Q Consensus 509 vgIam~~~~~~~~k----~~A-D~vl 529 (658)
+|||| +|+.+++| .+| +.+.
T Consensus 228 ~~vam-~NA~~~~k~~~~~~a~~~v~ 252 (273)
T PRK00192 228 IAVVV-PGPDGPNPPLLPGIADGEFI 252 (273)
T ss_pred eeEEe-CCCCCCCcccCccccCCceE
Confidence 99999 77776788 666 5665
No 49
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.72 E-value=5.7e-17 Score=158.31 Aligned_cols=196 Identities=22% Similarity=0.166 Sum_probs=119.9
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc-C----CCccEEE---------
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL-T----PDMQQII--------- 366 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~-~----~~~~~i~--------- 366 (658)
+++|+|||||+. +....+.++++|++|+++|++++++|||++..+..+.+.+++. . .+|..++
T Consensus 2 i~~DlDGTLL~~---~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~ 78 (221)
T TIGR02463 2 VFSDLDGTLLDS---HSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWREEP 78 (221)
T ss_pred EEEeCCCCCcCC---CCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccccCC
Confidence 468999999985 3335555999999999999999999999999999999999864 1 1222222
Q ss_pred -----EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE-e
Q 041225 367 -----INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII-D 440 (658)
Q Consensus 367 -----~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 440 (658)
..+.+.+.+.++++...+.......... .... ...... ...... ......... ....+.. .
T Consensus 79 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~---~~~~~~---~~~~~~----~~~~~~~~~-~~~~~~~~~ 145 (221)
T TIGR02463 79 GYPRIILGISYGIIRLVLETLSEELHFKFTPFD--DLSD---AEIAEL---TGLSGS----QAALAQDRE-ASVPLLWRD 145 (221)
T ss_pred CceEEecCCCHHHHHHHHHHHHHHhCCCceehh--hCCH---HHHHHH---hCcCHH----HHHHHHhcc-CCccEEecC
Confidence 1233556667777665543222111110 0000 000000 000000 000000001 1222333 2
Q ss_pred CccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEe
Q 041225 441 GNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
..+....+.+.+......+.. .+..+++.+.+.+|+.+++.++++ +.++|++||||.||++||+.||+|||+
T Consensus 146 ~~~~~~~~~~~l~~~~~~~~~-~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 146 SDSRMPRFTALLADLGLAIVQ-GNRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred chhHHHHHHHHHHHcCCeEEe-cCCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 233333333333332233333 356789999999999999999987 678899999999999999999999997
No 50
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.72 E-value=2.9e-17 Score=176.35 Aligned_cols=213 Identities=13% Similarity=0.083 Sum_probs=135.4
Q ss_pred HHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc----CCC-----------
Q 041225 297 RQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL----TPD----------- 361 (658)
Q Consensus 297 ~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~----~~~----------- 361 (658)
-+.++++|+||||++. ++.+.+.+.++|++|+++|+.++++|||+...+..+++.+++. ..+
T Consensus 415 ~~KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~~ 491 (694)
T PRK14502 415 FKKIVYTDLDGTLLNP---LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKDYF 491 (694)
T ss_pred eeeEEEEECcCCCcCC---CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCCcc
Confidence 3467899999999986 4457778999999999999999999999999999999988852 222
Q ss_pred -----------ccEEEEcCCCHHHHHHHHHHHHHhcCcccCcc-ccccccccc--hhHHHHHHhhcCCCCCCCCCCCchh
Q 041225 362 -----------MQQIIINGNSEEECKDLLADAKARYGVKSSNR-TKCNSKLKR--SAEIEYLAISNDAKFSDVPQGHDVK 427 (658)
Q Consensus 362 -----------~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (658)
++++...+.+.+.++++++..++......... .....+... +............... .... .
T Consensus 492 ~~~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~---~a~~-a 567 (694)
T PRK14502 492 RLPFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLK---QAEL-A 567 (694)
T ss_pred cccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHH---HHHH-H
Confidence 23455567788899999998877432111100 000011111 1101111111110000 0000 0
Q ss_pred hhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEE--cCCcCChh
Q 041225 428 EVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAI--GDGANDVS 502 (658)
Q Consensus 428 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~ai--GDg~NDi~ 502 (658)
.........+..+.++....+...+......+.. ++.++++. .+++|+.+++.|+++ +.+++++| |||.||++
T Consensus 568 ~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~-g~rfleI~-~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDis 645 (694)
T PRK14502 568 KQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSF-GGRFYEVT-GGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYS 645 (694)
T ss_pred hhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEE-CCEEEEeC-CCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHH
Confidence 0011112333344445555555555554444444 67778877 699999999999988 44678888 99999999
Q ss_pred hhhhcceeEEecCccc
Q 041225 503 MIQMADVGVGICGQEG 518 (658)
Q Consensus 503 Ml~~A~vgIam~~~~~ 518 (658)
||+.||+||||++...
T Consensus 646 MLe~Ag~gVAM~~~~~ 661 (694)
T PRK14502 646 MLETVDSPILVQRPGN 661 (694)
T ss_pred HHHhCCceEEEcCCCC
Confidence 9999999999965554
No 51
>PTZ00174 phosphomannomutase; Provisional
Probab=99.71 E-value=1.2e-17 Score=165.31 Aligned_cols=214 Identities=13% Similarity=0.133 Sum_probs=124.7
Q ss_pred HHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc------CccCCCccEE------
Q 041225 298 QTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC------KLLTPDMQQI------ 365 (658)
Q Consensus 298 ~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~------gl~~~~~~~i------ 365 (658)
.+++++|+|||||+. +.++++.++++|++++++|++|++||||++..+....... -++..+|.++
T Consensus 5 ~klia~DlDGTLL~~---~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~~~ 81 (247)
T PTZ00174 5 KTILLFDVDGTLTKP---RNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDGEL 81 (247)
T ss_pred CeEEEEECcCCCcCC---CCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECCeE
Confidence 356789999999987 5689999999999999999999999999998876655422 1233333333
Q ss_pred -EEcC----CCHHHHHHHHHHHHHhc-CcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE
Q 041225 366 -IING----NSEEECKDLLADAKARY-GVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII 439 (658)
Q Consensus 366 -~~~g----~~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 439 (658)
+.+. .+.+.+.++++...... ..... .....+....... .. .................. ..
T Consensus 82 i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~---~~ 148 (247)
T PTZ00174 82 FHSQSILKFLGEEKLKKFINFCLRYIADLDIP--VKRGTFIEYRNGM-----IN---ISPIGRNCSQEERDEFEK---YD 148 (247)
T ss_pred EEEEcchhcCCHHHHHHHHHHHHHHHHhcCCc--cceeeeEEcCCce-----EE---eccccccCCHHHHHHHHh---cC
Confidence 3332 24577888887765431 11110 0000000000000 00 000000000000000000 11
Q ss_pred eCccHHHHHHHhhHHhhh--hhhcc--CCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhc-cee
Q 041225 440 DGNSLVYILEKDLESDLF--DLATS--CRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMA-DVG 510 (658)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~--~i~~s--~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A-~vg 510 (658)
........+.+.+...+. .+..+ ++.++++.+.+++|+.+|+.|+++ .++|+|||| |.||++||+.| -.|
T Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g 227 (247)
T PTZ00174 149 KEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIG 227 (247)
T ss_pred CcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCce
Confidence 111111222233333222 22223 246899999999999999999998 789999999 99999999965 456
Q ss_pred EEecCccchhhhhhccccc
Q 041225 511 VGICGQEGRQAVMASDFAM 529 (658)
Q Consensus 511 Iam~~~~~~~~k~~AD~vl 529 (658)
+++ +|+.+.+|..|.++.
T Consensus 228 ~~v-~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 228 HSV-KNPEDTIKILKELFL 245 (247)
T ss_pred EEe-CCHHHHHHHHHHHhc
Confidence 666 366666777776543
No 52
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.69 E-value=2e-16 Score=153.64 Aligned_cols=192 Identities=15% Similarity=0.153 Sum_probs=121.8
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC----CC---------------
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT----PD--------------- 361 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~----~~--------------- 361 (658)
+++|+||||+.. +...++++++|++|+++|++++++|||++..+..+..++|+.. .+
T Consensus 2 i~~DlDGTLl~~----~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~~~ 77 (225)
T TIGR02461 2 IFTDLDGTLLPP----GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPFPV 77 (225)
T ss_pred EEEeCCCCCcCC----CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccccc
Confidence 468999999983 3566789999999999999999999999999999999988632 22
Q ss_pred -------ccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCc
Q 041225 362 -------MQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIAS 434 (658)
Q Consensus 362 -------~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (658)
++.++..+.+.+.++++++.+++.+++..... . . ........ ...... ..........+
T Consensus 78 ~~~~~~~~~~i~~~~l~~~~~~~il~~~~~~~~~~~~~~----~--~-~~~~~~~~---~~~~~~----~~~~~~~~~~k 143 (225)
T TIGR02461 78 GAGREVGNYEVIELGKPVAKIRAALKEAENEYGLKYYGN----S--T-AEEVEKLT---GLPREL----APLAKRREYSE 143 (225)
T ss_pred cccccCCCeEEEEcCCCHHHHHHHHHHHHHhcCccchhc----C--C-HHHHHHHH---CcCHHH----HHHHHhhhcCC
Confidence 23355667788999999988877433221110 0 0 00000000 000000 00000111122
Q ss_pred EEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc-----CCCeEEEEcCCcCChhhhhhcce
Q 041225 435 LALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR-----TDDMTLAIGDGANDVSMIQMADV 509 (658)
Q Consensus 435 ~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~-----~~~~v~aiGDg~NDi~Ml~~A~v 509 (658)
. ++...++....+.+.++.....+..+.+. +++ +.+.+|+.+++.++++ +...+++|||+.||++||+.||+
T Consensus 144 i-~~~~~~e~~~~~~~~~~~~~~~~~~s~~~-~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 144 T-IFLWSREGWEAILVTARARGLKYTHGGRF-YTV-HGGSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred c-ccCCCHHHHHHHHHHHHHcCCcEEECCEE-EEE-CCCCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 2 23333333333333333333444555444 444 5599999999999876 23479999999999999999999
Q ss_pred eEEe
Q 041225 510 GVGI 513 (658)
Q Consensus 510 gIam 513 (658)
||++
T Consensus 221 ~v~v 224 (225)
T TIGR02461 221 AFLV 224 (225)
T ss_pred cEec
Confidence 9987
No 53
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.67 E-value=3.1e-16 Score=155.74 Aligned_cols=201 Identities=17% Similarity=0.173 Sum_probs=125.7
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCH-------
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSE------- 372 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~------- 372 (658)
+++.|+|||||+...-+.+++|++.+++++++++|+.++++|||++..+..+.+++++..++ .+|..||..-
T Consensus 3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~ 81 (249)
T TIGR01485 3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEV 81 (249)
T ss_pred EEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCc
Confidence 35689999999632115678899999999999999999999999999999999988876553 3444555410
Q ss_pred --HHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHH--
Q 041225 373 --EECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYIL-- 448 (658)
Q Consensus 373 --~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-- 448 (658)
......+... +. . ...... ...+........ ......++.+..+.......+
T Consensus 82 ~~~~~~~~~~~~---------------~~--~-~~~~~~----~~~~~~l~~~~~--~~~~~~k~~~~~~~~~~~~~~~~ 137 (249)
T TIGR01485 82 PDQHWAEYLSEK---------------WQ--R-DIVVAI----TDKFEELKPQPD--LEQRPHKVSFFLDPEAAPEVIKQ 137 (249)
T ss_pred CCHHHHHHHhcc---------------cC--H-HHHHHH----HhcCcccccCCc--cccCCeeEEEEechhhhhHHHHH
Confidence 0001100000 00 0 000000 001111110000 012344555554433322222
Q ss_pred -HHhhHHh--hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhh-cceeEEecCccchhh
Q 041225 449 -EKDLESD--LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQM-ADVGVGICGQEGRQA 521 (658)
Q Consensus 449 -~~~~~~~--~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~-A~vgIam~~~~~~~~ 521 (658)
.+.+... ...++.++..++++.+.+.+|+.+++.|+++ +.+++++|||+.||++||+. ++.||+| +|+.+++
T Consensus 138 l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~-~na~~~~ 216 (249)
T TIGR01485 138 LTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIV-SNAQEEL 216 (249)
T ss_pred HHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEE-CCCHHHH
Confidence 2222221 1223455667899999999999999999987 56899999999999999998 6799999 6676667
Q ss_pred hhhcc
Q 041225 522 VMASD 526 (658)
Q Consensus 522 k~~AD 526 (658)
|+.++
T Consensus 217 k~~~~ 221 (249)
T TIGR01485 217 LQWYD 221 (249)
T ss_pred HHHHH
Confidence 76543
No 54
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.67 E-value=2.5e-16 Score=155.22 Aligned_cols=205 Identities=17% Similarity=0.181 Sum_probs=124.8
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHH---H--
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEE---C-- 375 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~---~-- 375 (658)
+++|+||||++. +..+++.+ ++++ ++++|++++++|||++..+..+...+++..++ .+|..||...-. .
T Consensus 2 i~~DlDgTLl~~---~~~~~~~~-~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~-~~I~~nGa~i~~~~~~~~ 75 (236)
T TIGR02471 2 IITDLDNTLLGD---DEGLASFV-ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD-VLIARVGTEIYYGPELQP 75 (236)
T ss_pred eEEeccccccCC---HHHHHHHH-HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC-EEEECCCceEEeCCCCCC
Confidence 468999999985 44676655 6776 79999999999999999999999999875332 566666652100 0
Q ss_pred HHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCcc--HHHHHHHhhH
Q 041225 376 KDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNS--LVYILEKDLE 453 (658)
Q Consensus 376 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ 453 (658)
.......... .+. . ......... ..... ... .......++.+...++. ....+...+.
T Consensus 76 ~~~~~~~~~~-----------~~~--~-~~~~~~~~~----~~~~~-~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~l~ 135 (236)
T TIGR02471 76 DRFWQKHIDH-----------DWR--R-QAVVEALAD----IPGLT-LQD-DQEQGPFKISYLLDPEGEPILPQIRQRLR 135 (236)
T ss_pred ChhHHHHHhc-----------CCC--H-HHHHHHHhc----CCCcE-eCC-hhcCCCeeEEEEECcccchHHHHHHHHHH
Confidence 0000000000 000 0 000110000 00000 000 01112344444444432 1112222222
Q ss_pred Hhhh--hhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcc--
Q 041225 454 SDLF--DLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD-- 526 (658)
Q Consensus 454 ~~~~--~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD-- 526 (658)
.... .+..++...+++.+.+.+|+.+++.|+++ +.+.+++|||+.||++||+.+++||+| +|+.+++|+.|+
T Consensus 136 ~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav-~na~~~~k~~a~~~ 214 (236)
T TIGR02471 136 QQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV-GNHDPELEGLRHQQ 214 (236)
T ss_pred hccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE-cCCcHHHHHhhcCC
Confidence 2111 23344556789999999999999999987 456899999999999999999999999 677778999999
Q ss_pred --cccccc
Q 041225 527 --FAMGQF 532 (658)
Q Consensus 527 --~vl~~~ 532 (658)
+|....
T Consensus 215 ~~~v~~~~ 222 (236)
T TIGR02471 215 RIYFANNP 222 (236)
T ss_pred cEEEcCCC
Confidence 665543
No 55
>PLN02382 probable sucrose-phosphatase
Probab=99.64 E-value=5.3e-16 Score=163.31 Aligned_cols=200 Identities=18% Similarity=0.196 Sum_probs=124.1
Q ss_pred HHHhhhccceeeeccccccccCCChHHHH-HHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAI-EALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS------ 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI-~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~------ 371 (658)
.+++.|+|||||+..+ ..++++....++ ++++++|+.++++|||++..+..+.+..++..++ .+|..||..
T Consensus 10 ~lI~sDLDGTLL~~~~-~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~-~~I~~nGt~I~~~~~ 87 (413)
T PLN02382 10 LMIVSDLDHTMVDHHD-PENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPD-ITIMSVGTEIAYGES 87 (413)
T ss_pred EEEEEcCCCcCcCCCC-ccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCC-EEEEcCCcEEEeCCC
Confidence 3567899999997521 125665566666 8899999999999999999999999999987764 233334431
Q ss_pred ---HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHH
Q 041225 372 ---EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYIL 448 (658)
Q Consensus 372 ---~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 448 (658)
.......++. .. . .....+... .+.... .+....+...++.+..+.......
T Consensus 88 ~~~d~~w~~~l~~---~w------------~--~~~v~~~~~-----~~~~l~--~q~~~~~~~~Ki~~~~~~~~~~~~- 142 (413)
T PLN02382 88 MVPDHGWVEYLNK---KW------------D--REIVVEETS-----KFPELK--LQPETEQRPHKVSFYVDKKKAQEV- 142 (413)
T ss_pred CccChhHHHHHhc---cC------------C--hhhHHHHHh-----cCCCcc--cCCcccCCCeEEEEEechHHhHHH-
Confidence 1111111110 00 0 000000000 000000 000011234455555544333222
Q ss_pred HHhhHHhh------hhhhccCCeeEEEEcCcccHHHHHHHHHhc------CCCeEEEEcCCcCChhhhhhcc-eeEEecC
Q 041225 449 EKDLESDL------FDLATSCRVVLCCRVAPLQKAGIVDLIKSR------TDDMTLAIGDGANDVSMIQMAD-VGVGICG 515 (658)
Q Consensus 449 ~~~~~~~~------~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~------~~~~v~aiGDg~NDi~Ml~~A~-vgIam~~ 515 (658)
...+...+ ..++.++...+++.+.+.+|+.+++.|+++ +.+++++||||.||++||+.++ +||+| +
T Consensus 143 ~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam-~ 221 (413)
T PLN02382 143 IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV-S 221 (413)
T ss_pred HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE-c
Confidence 22222222 234456677899999999999999999887 3568999999999999999999 79999 7
Q ss_pred ccchhhhhhcc
Q 041225 516 QEGRQAVMASD 526 (658)
Q Consensus 516 ~~~~~~k~~AD 526 (658)
|+.+++|+.++
T Consensus 222 NA~~elk~~a~ 232 (413)
T PLN02382 222 NAQEELLQWYA 232 (413)
T ss_pred CCcHHHHHHHH
Confidence 77777887543
No 56
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.61 E-value=2.8e-15 Score=145.44 Aligned_cols=201 Identities=15% Similarity=0.122 Sum_probs=119.8
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC----CccEEE---------
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP----DMQQII--------- 366 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~----~~~~i~--------- 366 (658)
++++|+|||||+. ++.+.+.+.++|++|+++||.|+++|||....+..+.+++++..+ ++..|+
T Consensus 3 LIftDLDGTLLd~---~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~~~~~ 79 (302)
T PRK12702 3 LVLSSLDGSLLDL---EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHYFPAG 79 (302)
T ss_pred EEEEeCCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEcccccccc
Confidence 4688999999996 557888899999999999999999999999999999999997432 222222
Q ss_pred ---------------EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhc
Q 041225 367 ---------------INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAA 431 (658)
Q Consensus 367 ---------------~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (658)
.-|.+...++.+++.+...++........... .......+ .....-......
T Consensus 80 ~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~--------~ei~~~TG-----L~~~~A~~A~~R 146 (302)
T PRK12702 80 ILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTA--------SELAAATG-----IPLEEAERAQKR 146 (302)
T ss_pred ccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCH--------HHHHHHhC-----cCHHHHHHHHhc
Confidence 11223556666666666553332221111100 00000000 000000001112
Q ss_pred cCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCee--EE------------------EEcCcccHHHHHHHHHhc-C---
Q 041225 432 IASLALIIDGNSLVYILEKDLESDLFDLATSCRVV--LC------------------CRVAPLQKAGIVDLIKSR-T--- 487 (658)
Q Consensus 432 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~--i~------------------~~~~~~~K~~~v~~L~~~-~--- 487 (658)
.+.-.++..+..... .+.+......++..++.. +. ..+.+.+|+.+++.|++. .
T Consensus 147 e~SEp~~w~~~~~~~--~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~ 224 (302)
T PRK12702 147 EYSEIFSYSGDPARL--REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHL 224 (302)
T ss_pred cCCcceEecCCHHHH--HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhcc
Confidence 222233333433222 333444344444333221 11 223377999999999987 2
Q ss_pred -CCeEEEEcCCcCChhhhhhcceeEEecCccc
Q 041225 488 -DDMTLAIGDGANDVSMIQMADVGVGICGQEG 518 (658)
Q Consensus 488 -~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~ 518 (658)
.-.++++|||.||++||++||++|.+.+...
T Consensus 225 ~~~~tiaLGDspND~~mLe~~D~~vvi~~~~~ 256 (302)
T PRK12702 225 GPIKALGIGCSPPDLAFLRWSEQKVVLPSPIA 256 (302)
T ss_pred CCceEEEecCChhhHHHHHhCCeeEEecCCCC
Confidence 3389999999999999999999999955443
No 57
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.57 E-value=2.2e-14 Score=142.93 Aligned_cols=198 Identities=10% Similarity=0.080 Sum_probs=121.6
Q ss_pred HHHhhhccceeeeccc--cccccCCChHHHHHHHHh-cCCeEEEEecCChhHHHHHHHHcCc--cCCCccEEE-------
Q 041225 299 TAALIECDLTLLGATG--IEDKLQDGVPEAIEALRQ-AGIKVWVLTGDKQDTAISIALSCKL--LTPDMQQII------- 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~--~~d~l~~~~~~aI~~l~~-~GI~v~i~TGr~~~~a~~ia~~~gl--~~~~~~~i~------- 366 (658)
.++++|+||||+.... -...++++++++|++|++ .|++++++|||+...+..+...+++ +..++..+.
T Consensus 15 ~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~ 94 (266)
T PRK10187 15 YAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTH 94 (266)
T ss_pred EEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCee
Confidence 4567999999998411 023688999999999998 7999999999999999888766552 222332222
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE---e-Cc
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII---D-GN 442 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~-~~ 442 (658)
....+.+.+..+.+.+.+...-......+.. ...+.+.. + ..
T Consensus 95 ~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k----------------------------------~~~~~~h~r~~~~~~ 140 (266)
T PRK10187 95 IVHLPDAIARDISVQLHTALAQLPGAELEAK----------------------------------GMAFALHYRQAPQHE 140 (266)
T ss_pred eccCChhHHHHHHHHHHHHhccCCCcEEEeC----------------------------------CcEEEEECCCCCccH
Confidence 1222344444444444332100000000000 00000000 0 11
Q ss_pred cHHHHHHHhhHHhhh-hhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc----ceeEEec
Q 041225 443 SLVYILEKDLESDLF-DLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMA----DVGVGIC 514 (658)
Q Consensus 443 ~~~~~~~~~~~~~~~-~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A----~vgIam~ 514 (658)
+....+...+...+. ..+.+++.++++++.+.+|+.+++.+.++ ..+.+++|||+.||.+||+.+ ++||+|
T Consensus 141 ~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vav- 219 (266)
T PRK10187 141 DALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKV- 219 (266)
T ss_pred HHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEE-
Confidence 111112222222221 23446788999999999999999999988 357899999999999999999 999999
Q ss_pred Cccchhhhhhcccccccccch
Q 041225 515 GQEGRQAVMASDFAMGQFRFL 535 (658)
Q Consensus 515 ~~~~~~~k~~AD~vl~~~~~l 535 (658)
|++. ..|++.+.+-.-.
T Consensus 220 g~a~----~~A~~~l~~~~~v 236 (266)
T PRK10187 220 GTGA----TQASWRLAGVPDV 236 (266)
T ss_pred CCCC----CcCeEeCCCHHHH
Confidence 5543 3577777765533
No 58
>PLN02423 phosphomannomutase
Probab=99.57 E-value=2.5e-14 Score=140.88 Aligned_cols=198 Identities=14% Similarity=0.127 Sum_probs=116.1
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc------CccCCCcc-------EEEE
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC------KLLTPDMQ-------QIII 367 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~------gl~~~~~~-------~i~~ 367 (658)
.++|+||||+.. ++++++++.++|++|+++ ++|+++|||.+.......... .++..++. .++.
T Consensus 10 ~~~D~DGTLl~~---~~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~~i~~ 85 (245)
T PLN02423 10 ALFDVDGTLTAP---RKEATPEMLEFMKELRKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGKLIGT 85 (245)
T ss_pred EEEeccCCCcCC---CCcCCHHHHHHHHHHHhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCEEEEE
Confidence 348999999987 568999999999999987 999999999888775433322 23343333 3333
Q ss_pred ----cCCCHHHHHHHHHHHHHhc-CcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCc
Q 041225 368 ----NGNSEEECKDLLADAKARY-GVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGN 442 (658)
Q Consensus 368 ----~g~~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 442 (658)
...+.+.++++++..+... ..... .....+...... .................+..++..+ ..
T Consensus 86 ~~l~~~l~~~~~~~ii~~~~~~~~~~~i~--~~~~~~ie~~~~--------i~~~~~~~~~~~~~~~~~~~~i~~i--~~ 153 (245)
T PLN02423 86 QSLKSFLGEDKLKEFINFTLHYIADLDIP--IKRGTFIEFRSG--------MLNVSPIGRNCSQEERDEFEKYDKV--HN 153 (245)
T ss_pred ecccccCCHHHHHHHHHHHHHHHHHcCCc--cccCCeEEccCC--------ccccCcccccCCHhHHhhHHhhCcc--ch
Confidence 2235588899998876531 11111 110111110000 0000000011100111111111111 11
Q ss_pred cHHHHHHHhhHHhhh--hh--hccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhh-cceeEEe
Q 041225 443 SLVYILEKDLESDLF--DL--ATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQM-ADVGVGI 513 (658)
Q Consensus 443 ~~~~~~~~~~~~~~~--~i--~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~-A~vgIam 513 (658)
.. ......+...+. .+ ..++..++++.+.+++|+.+++.|+ +.++|+|||| |.||++||+. .-.|+++
T Consensus 154 ~~-~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~ 230 (245)
T PLN02423 154 IR-PKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTV 230 (245)
T ss_pred HH-HHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEe
Confidence 11 222233333332 23 3334479999999999999999999 5799999999 8999999997 6678888
Q ss_pred cCcc
Q 041225 514 CGQE 517 (658)
Q Consensus 514 ~~~~ 517 (658)
.+-+
T Consensus 231 ~~~~ 234 (245)
T PLN02423 231 TSPD 234 (245)
T ss_pred CCHH
Confidence 5543
No 59
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.56 E-value=4.4e-15 Score=121.36 Aligned_cols=90 Identities=29% Similarity=0.343 Sum_probs=68.8
Q ss_pred hhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCC
Q 041225 123 AACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFD 202 (658)
Q Consensus 123 ~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~ 202 (658)
+|||++........ ...+. .++|+|.||++|+..+|..+. ..+....+++++.+||+
T Consensus 1 ~LCn~a~~~~~~~~------------~~~~~-~G~ptE~ALl~~~~~~g~~~~----------~~~~~~~~~~~~~~pF~ 57 (91)
T PF13246_consen 1 ALCNDAEIEYDDES------------KTEEI-IGDPTEKALLRFAKKLGVGID----------IKEIRSKYKIVAEIPFD 57 (91)
T ss_pred CCccccEeecCCCC------------ccccc-cCCcCHHHHHHHHHHcCCCCc----------HHHHHhhcceeEEEccC
Confidence 58999877543321 11123 448999999999999975432 23345678999999999
Q ss_pred CCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhc
Q 041225 203 SVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAK 236 (658)
Q Consensus 203 s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~ 236 (658)
|+||||+||++ .++.+.+|+|||||.|+++|+.
T Consensus 58 S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 58 SERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999999999 3345778999999999999985
No 60
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.51 E-value=6.3e-14 Score=135.01 Aligned_cols=184 Identities=22% Similarity=0.281 Sum_probs=110.1
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcC--ccCCCccEEEEcCC-----CHH
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK--LLTPDMQQIIINGN-----SEE 373 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~g--l~~~~~~~i~~~g~-----~~~ 373 (658)
+++|+||||+..- ..++++++.++|++|+++|++++++|||+...+..+...++ ++..++..+...+. +.+
T Consensus 2 i~~D~DgTL~~~~--~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~ 79 (204)
T TIGR01484 2 LFFDLDGTLLDPN--AHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSD 79 (204)
T ss_pred EEEeCcCCCcCCC--CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccc
Confidence 4689999999852 14799999999999999999999999999999999887633 33344444433221 112
Q ss_pred HHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCc----cHHHHHH
Q 041225 374 ECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGN----SLVYILE 449 (658)
Q Consensus 374 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~ 449 (658)
..+.++..... ...... ... ........ + .+.....+...+. .....+.
T Consensus 80 ~~~~~~~~~~~-~~~~~~--~~~----------------------~~~~~~~~-e-~~~~~~~~~~~~~~~~~~~~~~~~ 132 (204)
T TIGR01484 80 VFEEILGIKEE-IGAELK--SLS----------------------EHYVGTFI-E-DKAIAVAIHYVGAELGQELDSKMR 132 (204)
T ss_pred cHHHHHHhhhh-cCceee--eec----------------------ccccccee-e-cccceeeEEEeccchhhHHHHHHH
Confidence 22333322211 000000 000 00000000 0 0111112211111 1111111
Q ss_pred HhhHH-----hhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEe
Q 041225 450 KDLES-----DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 450 ~~~~~-----~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
..+.. ....+..+++..+++.+.+.+|+.+++.++++ +.+.+++|||+.||++|++.+++||||
T Consensus 133 ~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 133 ERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 11111 11223335778899999999999999999987 457799999999999999999999997
No 61
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.42 E-value=9.5e-13 Score=108.95 Aligned_cols=116 Identities=22% Similarity=0.389 Sum_probs=97.6
Q ss_pred ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccc
Q 041225 316 EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTK 395 (658)
Q Consensus 316 ~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~ 395 (658)
-.++-+++.++|++|++. +++.++|||...+....|+-.|+-.
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~------------------------------------ 70 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV------------------------------------ 70 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce------------------------------------
Confidence 458999999999999999 9999999999999999999888622
Q ss_pred ccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCccc
Q 041225 396 CNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475 (658)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~ 475 (658)
..+++...+..
T Consensus 71 ---------------------------------------------------------------------~rv~a~a~~e~ 81 (152)
T COG4087 71 ---------------------------------------------------------------------ERVFAGADPEM 81 (152)
T ss_pred ---------------------------------------------------------------------eeeecccCHHH
Confidence 34677788889
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCc--cchhhhhhcccccccccchHHH
Q 041225 476 KAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQ--EGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 476 K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~--~~~~~k~~AD~vl~~~~~l~~l 538 (658)
|..+++.|++. .+.|+|+|||.||++||+.||+||..-++ ....+..+||+++.+-.-...+
T Consensus 82 K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl 145 (152)
T COG4087 82 KAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDL 145 (152)
T ss_pred HHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHH
Confidence 99999999985 78999999999999999999999966343 3445668999998876554444
No 62
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.29 E-value=2.9e-11 Score=137.99 Aligned_cols=194 Identities=20% Similarity=0.135 Sum_probs=116.6
Q ss_pred HHHhhhccceeeecccc--ccccCCChHHHHHHHHh-cCCeEEEEecCChhHHHHHHHHcC--ccCCCccEEEEcCC---
Q 041225 299 TAALIECDLTLLGATGI--EDKLQDGVPEAIEALRQ-AGIKVWVLTGDKQDTAISIALSCK--LLTPDMQQIIINGN--- 370 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~--~d~l~~~~~~aI~~l~~-~GI~v~i~TGr~~~~a~~ia~~~g--l~~~~~~~i~~~g~--- 370 (658)
.++++|.||||+..... ...+++++.++|++|.+ .|+.|+++|||+...+.......+ ++..+|..+...+.
T Consensus 493 rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~ 572 (726)
T PRK14501 493 RLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQ 572 (726)
T ss_pred eEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceE
Confidence 46789999999984210 12477899999999999 599999999999999887765444 33334433332111
Q ss_pred -----C---HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeC-
Q 041225 371 -----S---EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDG- 441 (658)
Q Consensus 371 -----~---~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 441 (658)
+ .+.+..+++.+..... + .... .+..........
T Consensus 573 ~~~~~~~~w~~~v~~il~~~~~~~~--------------------------g---s~ie--------~k~~~l~~~~r~~ 615 (726)
T PRK14501 573 LLEPVATEWKDAVRPILEEFVDRTP--------------------------G---SFIE--------EKEASLAWHYRNA 615 (726)
T ss_pred ECCCcchhHHHHHHHHHHHHHhcCC--------------------------C---cEEE--------EcceEEEEEccCC
Confidence 0 1122222222211100 0 0000 000111111111
Q ss_pred -ccHHHH----HHHhhHHh---hhhhhccCCeeEEEEcCcccHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhc---ce
Q 041225 442 -NSLVYI----LEKDLESD---LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR-TDDMTLAIGDGANDVSMIQMA---DV 509 (658)
Q Consensus 442 -~~~~~~----~~~~~~~~---~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A---~v 509 (658)
.+.... +...+... ....+..++.++++++.+.+||.+++.+.+. +.+.+++|||+.||.+||+.+ ++
T Consensus 616 d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~ 695 (726)
T PRK14501 616 DPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAI 695 (726)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCce
Confidence 111111 11111111 1112334678899999999999999999987 668999999999999999986 68
Q ss_pred eEEecCccchhhhhhcccccccccc
Q 041225 510 GVGICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 510 gIam~~~~~~~~k~~AD~vl~~~~~ 534 (658)
+|+| |+. +.+|++.+.+.+-
T Consensus 696 ~v~v-G~~----~s~A~~~l~~~~e 715 (726)
T PRK14501 696 TVKV-GPG----ESRARYRLPSQRE 715 (726)
T ss_pred EEEE-CCC----CCcceEeCCCHHH
Confidence 8888 443 4678898887643
No 63
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.26 E-value=9.5e-12 Score=113.34 Aligned_cols=121 Identities=16% Similarity=0.170 Sum_probs=90.0
Q ss_pred HHhhhccceeeec---cccccc------cCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC
Q 041225 300 AALIECDLTLLGA---TGIEDK------LQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN 370 (658)
Q Consensus 300 ~~~~d~DgTllg~---~~~~d~------l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~ 370 (658)
++++|+||||+.- ..-+++ +++. .+|++|+++|+++.|+||++...+..+++.+|+...
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~---------- 70 (154)
T TIGR01670 3 LLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YGIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL---------- 70 (154)
T ss_pred EEEEeCceeEEcCeEEECCCCcEEEEEechhH--HHHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE----------
Confidence 3578999999972 111110 2222 389999999999999999999999999988886210
Q ss_pred CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHH
Q 041225 371 SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEK 450 (658)
Q Consensus 371 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 450 (658)
T Consensus 71 -------------------------------------------------------------------------------- 70 (154)
T TIGR01670 71 -------------------------------------------------------------------------------- 70 (154)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccc
Q 041225 451 DLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDF 527 (658)
Q Consensus 451 ~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~ 527 (658)
+.. ...|...++.++++ +++.++++||+.||++|++.|+++++|. ++.+.++..|++
T Consensus 71 ----------------~~~---~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~ 130 (154)
T TIGR01670 71 ----------------YQG---QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADY 130 (154)
T ss_pred ----------------Eec---ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCE
Confidence 000 13466677777655 5678999999999999999999999994 444468888999
Q ss_pred ccccc
Q 041225 528 AMGQF 532 (658)
Q Consensus 528 vl~~~ 532 (658)
++.+.
T Consensus 131 i~~~~ 135 (154)
T TIGR01670 131 VTRIA 135 (154)
T ss_pred EecCC
Confidence 88644
No 64
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.25 E-value=7.9e-12 Score=123.19 Aligned_cols=190 Identities=18% Similarity=0.203 Sum_probs=105.9
Q ss_pred Hhhhccceee-eccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC------CccEEEE--cCCC
Q 041225 301 ALIECDLTLL-GATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP------DMQQIII--NGNS 371 (658)
Q Consensus 301 ~~~d~DgTll-g~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~------~~~~i~~--~g~~ 371 (658)
++.|.|+||+ |. ..-.....+.++...+.++.++++|||+...+..+..+.++..| .+..|+. +..+
T Consensus 5 l~sDlD~Tl~~~~----~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~ 80 (247)
T PF05116_consen 5 LASDLDGTLIDGD----DEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQP 80 (247)
T ss_dssp EEEETBTTTBHCH----HHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE
T ss_pred EEEECCCCCcCCC----HHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcC
Confidence 4679999999 43 22223334444445578899999999999999999999988654 2333333 1212
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHH-HHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHH---H
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEY-LAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVY---I 447 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~ 447 (658)
.....+.+..--. ...... ...... .. ......+...+..+.+....... .
T Consensus 81 d~~w~~~i~~~w~------------------~~~v~~~l~~~~~--l~-----~q~~~~q~~~k~sy~~~~~~~~~~~~~ 135 (247)
T PF05116_consen 81 DEEWQAHIDERWD------------------RERVEEILAELPG--LR-----PQPESEQRPFKISYYVDPDDSADILEE 135 (247)
T ss_dssp -HHHHHHHHTT--------------------HHHHHHHHHCHCC--EE-----EGGCCCGCCTCECEEEETTSHCHHHHH
T ss_pred hHHHHHHHHhcCC------------------hHHHHHHHHHhhC--cc-----cCCccccCCeeEEEEEecccchhHHHH
Confidence 2222221111000 000000 000000 00 00001112234455555544333 3
Q ss_pred HHHhhHHhhh--hhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchh
Q 041225 448 LEKDLESDLF--DLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQ 520 (658)
Q Consensus 448 ~~~~~~~~~~--~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~ 520 (658)
++..+..... .++.+....+++.+.+.+|+.+|+.|+++ +.+.|+++|||.||++||..+..||.+ +|+..+
T Consensus 136 i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV-~Na~~e 212 (247)
T PF05116_consen 136 IRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVV-GNAQPE 212 (247)
T ss_dssp HHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE--TTS-HH
T ss_pred HHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEE-cCCCHH
Confidence 3333333222 34556677899999999999999999998 567899999999999999999999999 555544
No 65
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.24 E-value=1.8e-11 Score=115.01 Aligned_cols=122 Identities=14% Similarity=0.131 Sum_probs=92.9
Q ss_pred HHHhhhccceeeecc----ccccccCCChH---HHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGAT----GIEDKLQDGVP---EAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~----~~~d~l~~~~~---~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
.++++|.||||++.. .-...+++... .+|+.|+++|+++.++||++...+..+++.+|+...
T Consensus 22 kli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~----------- 90 (183)
T PRK09484 22 RLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL----------- 90 (183)
T ss_pred eEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee-----------
Confidence 456789999999641 00123333333 799999999999999999999999999999886311
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 91 -------------------------------------------------------------------------------- 90 (183)
T PRK09484 91 -------------------------------------------------------------------------------- 90 (183)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
+. ....|...++.+++. .++++++|||+.||++|++.||+++++ +++...++..||++
T Consensus 91 ----------------f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v-~~~~~~~~~~a~~v 151 (183)
T PRK09484 91 ----------------YQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAV-ADAHPLLLPRADYV 151 (183)
T ss_pred ----------------ec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEec-CChhHHHHHhCCEE
Confidence 00 123567777777665 467899999999999999999999998 55555678889999
Q ss_pred cc
Q 041225 529 MG 530 (658)
Q Consensus 529 l~ 530 (658)
+.
T Consensus 152 ~~ 153 (183)
T PRK09484 152 TR 153 (183)
T ss_pred ec
Confidence 85
No 66
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.13 E-value=5.4e-10 Score=110.44 Aligned_cols=75 Identities=13% Similarity=0.096 Sum_probs=60.3
Q ss_pred hccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc--------ceeEEecCccchhhhhhcccc
Q 041225 460 ATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMA--------DVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 460 ~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A--------~vgIam~~~~~~~~k~~AD~v 528 (658)
+..++.++++++.+.+|+.+++.+.+. ....++++||+.||.+||+.+ ++||+|. .+ ..+..|+++
T Consensus 152 v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~ 228 (244)
T TIGR00685 152 VMDGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFH 228 (244)
T ss_pred EEECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEe
Confidence 345677899999999999999999987 346899999999999999999 5788883 22 256779999
Q ss_pred cccccchHH
Q 041225 529 MGQFRFLKR 537 (658)
Q Consensus 529 l~~~~~l~~ 537 (658)
+.+..-+..
T Consensus 229 ~~~~~~v~~ 237 (244)
T TIGR00685 229 LTGPQQVLE 237 (244)
T ss_pred CCCHHHHHH
Confidence 887765433
No 67
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.11 E-value=2.3e-10 Score=104.94 Aligned_cols=123 Identities=18% Similarity=0.213 Sum_probs=91.7
Q ss_pred HHHhhhccceeeec------cccc-cccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGA------TGIE-DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~------~~~~-d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
++..+|.||+|.+- .|-+ ...+..--.+|+.|+++|+++.|+|+.+...+....+.+|+...
T Consensus 8 ~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~----------- 76 (169)
T TIGR02726 8 KLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF----------- 76 (169)
T ss_pred eEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE-----------
Confidence 34568888888654 2211 12445667899999999999999999999999999999987321
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 77 -------------------------------------------------------------------------------- 76 (169)
T TIGR02726 77 -------------------------------------------------------------------------------- 76 (169)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
+... ..|-..++.+.++ .++++++|||+.||++|++.|++++|| +|+.+.++..|++|
T Consensus 77 ----------------f~~~--kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am-~nA~~~lk~~A~~I 137 (169)
T TIGR02726 77 ----------------HEGI--KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV-GDAVADVKEAAAYV 137 (169)
T ss_pred ----------------EecC--CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC-cCchHHHHHhCCEE
Confidence 0000 1333455555544 457899999999999999999999999 66666799999998
Q ss_pred ccc
Q 041225 529 MGQ 531 (658)
Q Consensus 529 l~~ 531 (658)
+..
T Consensus 138 ~~~ 140 (169)
T TIGR02726 138 TTA 140 (169)
T ss_pred cCC
Confidence 754
No 68
>PLN02580 trehalose-phosphatase
Probab=99.08 E-value=2.7e-09 Score=109.51 Aligned_cols=249 Identities=15% Similarity=0.134 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHH--HHHHHHHhhhccceeeecccccc--ccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 272 DEELKQWQHRYEDASTSLVDRAS--KLRQTAALIECDLTLLGATGIED--KLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~DgTllg~~~~~d--~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
+.++..|..++..+...++.-.. +-.+.++++|.||||.....--+ .+.++.++++++|.+.. .++|+|||+...
T Consensus 91 ~~~~~~~~~~~p~al~~~~~~~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~-~VAIVSGR~~~~ 169 (384)
T PLN02580 91 DFAYRTWMLKYPSALTSFEQIANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYF-PTAIISGRSRDK 169 (384)
T ss_pred hHHHHHHHHhCcHHHHHHHHHHHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCC-CEEEEeCCCHHH
Confidence 45677888887777665543222 22345678999999987632111 25789999999999885 899999999999
Q ss_pred HHHHHHHcCccCCCccEEEEcCCCHHHHHH-HH-HHHHHhcCcccCcccccccc-ccc--------hhHHHHHHhhcCCC
Q 041225 348 AISIALSCKLLTPDMQQIIINGNSEEECKD-LL-ADAKARYGVKSSNRTKCNSK-LKR--------SAEIEYLAISNDAK 416 (658)
Q Consensus 348 a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~-ii-~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~ 416 (658)
+.....-.++ .+...+|.+...... .. .... ..+........... ... ..-...+.......
T Consensus 170 L~~~l~~~~l-----~laGsHG~e~~~p~~~~~~~~~~--~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~ 242 (384)
T PLN02580 170 VYELVGLTEL-----YYAGSHGMDIMGPVRESVSNDHP--NCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDI 242 (384)
T ss_pred HHHHhCCCCc-----cEEEeCCceeecCCCCccccccc--ccccccccccccccccccchhhhhhHHHHHHHHHHHhccC
Confidence 8776543332 123333322100000 00 0000 00000000000000 000 00000000000000
Q ss_pred CCCCCCCCchhhhhccCcEEEEEe--CccHHHHHHHhhHH---hhh-hhhccCCeeEEEEc-CcccHHHHHHHHHhc-C-
Q 041225 417 FSDVPQGHDVKEVAAIASLALIID--GNSLVYILEKDLES---DLF-DLATSCRVVLCCRV-APLQKAGIVDLIKSR-T- 487 (658)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~---~~~-~i~~s~~~~i~~~~-~~~~K~~~v~~L~~~-~- 487 (658)
..... ..+...+++..- .+.........+.. .+. -.+..++.++++++ .+.+||.+|+.|.++ +
T Consensus 243 -----pGs~V--E~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~ 315 (384)
T PLN02580 243 -----KGAKV--ENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGL 315 (384)
T ss_pred -----CCCEE--EecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCC
Confidence 00000 001122222221 11111222222221 111 12344567899999 599999999999987 2
Q ss_pred -CC-e--EEEEcCCcCChhhhhh-----cceeEEecCccchhhhhhcccccccccchHHH
Q 041225 488 -DD-M--TLAIGDGANDVSMIQM-----ADVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 488 -~~-~--v~aiGDg~NDi~Ml~~-----A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
.. . +++|||+.||.+||+. +|+||+| +++. -...|++.+.+-.-...+
T Consensus 316 ~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~V-gn~~--~~t~A~y~L~dp~eV~~~ 372 (384)
T PLN02580 316 SNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILV-SSVP--KESNAFYSLRDPSEVMEF 372 (384)
T ss_pred CcccceeEEEECCCchHHHHHHhhhccCCceEEEE-ecCC--CCccceEEcCCHHHHHHH
Confidence 11 2 4899999999999996 6899999 4433 233678887776554444
No 69
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.05 E-value=9.8e-10 Score=111.80 Aligned_cols=129 Identities=26% Similarity=0.288 Sum_probs=92.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.|+.|+++|++++++||.....+..+.+.+|+... +. |..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~----~a-n~l--------------------------- 228 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAA----VA-NEL--------------------------- 228 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeE----EE-eEE---------------------------
Confidence 6889999999999999999999999988778888888887321 00 000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
. +.++.- . ..+..-...+..|.
T Consensus 229 --------------------------------------e-i~dg~l--------------t-----g~v~g~iv~~k~K~ 250 (322)
T PRK11133 229 --------------------------------------E-IMDGKL--------------T-----GNVLGDIVDAQYKA 250 (322)
T ss_pred --------------------------------------E-EECCEE--------------E-----eEecCccCCcccHH
Confidence 0 000000 0 00000012346899
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
.+++.++++ +++++++||||.||++|++.||+|||| |+.+.+++.||+++........|
T Consensus 251 ~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l 312 (322)
T PRK11133 251 DTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVL 312 (322)
T ss_pred HHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHH
Confidence 999999876 568999999999999999999999999 45556999999999754444433
No 70
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.03 E-value=1.2e-09 Score=124.51 Aligned_cols=174 Identities=16% Similarity=0.190 Sum_probs=103.8
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHH-HhcCCeEEEEecCChhHHHHHHHH---cCccCCCccEEEEcCCC---
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEAL-RQAGIKVWVLTGDKQDTAISIALS---CKLLTPDMQQIIINGNS--- 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l-~~~GI~v~i~TGr~~~~a~~ia~~---~gl~~~~~~~i~~~g~~--- 371 (658)
.++++|.||||+........+++++.++|++| ++.|+.|+++|||+..++...... ++++..+|..+...+..
T Consensus 597 rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~ 676 (854)
T PLN02205 597 RAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWE 676 (854)
T ss_pred eEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceee
Confidence 56789999999976433346778999999997 788999999999999998877643 45666666555433210
Q ss_pred ------HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEe-----
Q 041225 372 ------EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIID----- 440 (658)
Q Consensus 372 ------~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----- 440 (658)
....++.+....+.+.... .+... + .+...++..
T Consensus 677 ~~~~~~~~~w~~~v~~i~~~y~ert----------------------pGs~I----E---------~K~~slv~HyR~ad 721 (854)
T PLN02205 677 TCVPVADCSWKQIAEPVMQLYTETT----------------------DGSTI----E---------DKETALVWCYEDAD 721 (854)
T ss_pred ecchhhhHHHHHHHHHHHHHHhcCC----------------------Cchhh----e---------ecceEEEEehhhCC
Confidence 0011111111111000000 00000 0 001111110
Q ss_pred -------CccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc------CCCeEEEEcCCcCChhhhhhc
Q 041225 441 -------GNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR------TDDMTLAIGDGANDVSMIQMA 507 (658)
Q Consensus 441 -------~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~------~~~~v~aiGDg~NDi~Ml~~A 507 (658)
..+....+...+.... ..+.+++.++++++.+.+||.+++.+.+. +.+.+++|||+.||.+||+.+
T Consensus 722 pd~~~~qa~el~~~l~~~l~~~~-~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~ 800 (854)
T PLN02205 722 PDFGSCQAKELLDHLESVLANEP-VTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVI 800 (854)
T ss_pred hHHhhhhhHHHHHHHHHHHhcCc-eEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHh
Confidence 0111111111111111 23556778999999999999999999742 456899999999999999988
Q ss_pred c
Q 041225 508 D 508 (658)
Q Consensus 508 ~ 508 (658)
+
T Consensus 801 ~ 801 (854)
T PLN02205 801 T 801 (854)
T ss_pred h
Confidence 6
No 71
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.01 E-value=2.2e-09 Score=102.72 Aligned_cols=124 Identities=23% Similarity=0.234 Sum_probs=92.9
Q ss_pred cccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccc
Q 041225 317 DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 317 d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
.++.|++.+.++.++++|.+++++||-...-+.++++.+|+...-...+...
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~---------------------------- 127 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEID---------------------------- 127 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEe----------------------------
Confidence 3799999999999999999999999999999999999999854311111000
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
+| ...+.++...+.+..|
T Consensus 128 -------------------------------------------dG-------------------~ltG~v~g~~~~~~~K 145 (212)
T COG0560 128 -------------------------------------------DG-------------------KLTGRVVGPICDGEGK 145 (212)
T ss_pred -------------------------------------------CC-------------------EEeceeeeeecCcchH
Confidence 00 0012344566677899
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccc
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQF 532 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~ 532 (658)
...++.+.+. +.+.++|+|||.||+|||+.||.+|++.... .+...|+......
T Consensus 146 ~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~--~l~~~a~~~~~~~ 202 (212)
T COG0560 146 AKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKP--KLRALADVRIWPI 202 (212)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCH--HHHHHHHHhcChh
Confidence 9999888775 5568999999999999999999999994333 3666777655444
No 72
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.95 E-value=7.6e-09 Score=94.20 Aligned_cols=198 Identities=14% Similarity=0.166 Sum_probs=113.7
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc-----CCCccEEEEcC----
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL-----TPDMQQIIING---- 369 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~-----~~~~~~i~~~g---- 369 (658)
..+|.|+|+||++..+ -...+...+.+|+++|+.|++||..+.......-+.+|+- ..++..|+...
T Consensus 8 ~lIFtDlD~TLl~~~y----e~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~~~~~ 83 (274)
T COG3769 8 LLIFTDLDGTLLPHSY----EWQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPKGWFP 83 (274)
T ss_pred eEEEEcccCcccCCCC----CCCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecccccc
Confidence 4578999999999422 2234568999999999999999999999999988888874 23444444321
Q ss_pred -----------------CCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhcc
Q 041225 370 -----------------NSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAI 432 (658)
Q Consensus 370 -----------------~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (658)
...+.+++.++.+.+.++......... .+..... +.+... .......+.
T Consensus 84 ~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~-------~ei~e~T---Glpre~----aaLa~~rEy 149 (274)
T COG3769 84 FDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDD-------EEIAEWT---GLPREQ----AALAMLREY 149 (274)
T ss_pred cCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCH-------HHHHHHh---CCChHH----hHHHHHHHh
Confidence 144566666666666655543322111 0000000 000000 000000001
Q ss_pred CcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc----CCC-eEEEEcCCcCChhhhhhc
Q 041225 433 ASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR----TDD-MTLAIGDGANDVSMIQMA 507 (658)
Q Consensus 433 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~----~~~-~v~aiGDg~NDi~Ml~~A 507 (658)
....+--+.++...++...+....+.++...+.+. +......|+.+.+.+.+. +.. .+++.|||.||+|||...
T Consensus 150 seti~~rs~d~~~~~~~~~L~e~glt~v~garf~~-v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~ 228 (274)
T COG3769 150 SETIIWRSSDERMAQFTARLNERGLTFVHGARFWH-VLDASAGKGQAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVM 228 (274)
T ss_pred hhheeecccchHHHHHHHHHHhcCceEEeccceEE-EeccccCccHHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhh
Confidence 11112223344444455545544444444444332 222334588877777654 333 599999999999999999
Q ss_pred ceeEEecC
Q 041225 508 DVGVGICG 515 (658)
Q Consensus 508 ~vgIam~~ 515 (658)
|..+-+.|
T Consensus 229 d~AfiV~~ 236 (274)
T COG3769 229 DYAFIVKG 236 (274)
T ss_pred hhheeecc
Confidence 99997753
No 73
>PLN03017 trehalose-phosphatase
Probab=98.91 E-value=4.4e-08 Score=99.66 Aligned_cols=224 Identities=12% Similarity=0.110 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHH--HHHHHHhhhccceeeecccc-cc-ccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 272 DEELKQWQHRYEDASTSLVDRASK--LRQTAALIECDLTLLGATGI-ED-KLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~DgTllg~~~~-~d-~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
..++..|..++..+...+..-... -...++++|+||||+....- ++ .+.+++.++|++|. +|+.++++|||+...
T Consensus 83 ~~~~~~w~~~~psal~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~ 161 (366)
T PLN03017 83 QQQLNSWIMQHPSALEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDK 161 (366)
T ss_pred hhhhhHHHhhCChHHHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHH
Confidence 344566766655544443322211 12356789999999954331 22 58899999999999 889999999999999
Q ss_pred HHHHHHHcCccCCCccEEEEcCCCHH--------------------------HHHHHHHHHHHhcCcccCcccccccccc
Q 041225 348 AISIALSCKLLTPDMQQIIINGNSEE--------------------------ECKDLLADAKARYGVKSSNRTKCNSKLK 401 (658)
Q Consensus 348 a~~ia~~~gl~~~~~~~i~~~g~~~~--------------------------~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 401 (658)
+..+. ++ .+..++..+|.... .+.++.+.+...
T Consensus 162 l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~---------------- 220 (366)
T PLN03017 162 VYNFV---KL--AELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEK---------------- 220 (366)
T ss_pred HHHhh---cc--cCceEEEcCCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHH----------------
Confidence 88773 22 22334455554200 001111100000
Q ss_pred chhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCc--cHHHHHHHhhHH---hhh-hhhccCCeeEEEEcC-cc
Q 041225 402 RSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGN--SLVYILEKDLES---DLF-DLATSCRVVLCCRVA-PL 474 (658)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~---~~~-~i~~s~~~~i~~~~~-~~ 474 (658)
....+-. ..+ .+....++..-.. .....+...+.. ... ..+..++.++++++. +.
T Consensus 221 ----------~~~~pGa-~VE-------~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~ 282 (366)
T PLN03017 221 ----------TKSTPGA-KVE-------NHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEW 282 (366)
T ss_pred ----------HhcCCCC-EEE-------ecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCC
Confidence 0000000 000 0111222222111 110111111111 111 134567889999985 89
Q ss_pred cHHHHHHHHHhc-C-----CCeEEEEcCCcCChhhhhhc-----ceeEEecCccchhhhhhcccccccccchHHH
Q 041225 475 QKAGIVDLIKSR-T-----DDMTLAIGDGANDVSMIQMA-----DVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 475 ~K~~~v~~L~~~-~-----~~~v~aiGDg~NDi~Ml~~A-----~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
+||.+++.|.+. + ...++++||-..|-.||+.. ++||.+ |... -...|++.+.+-.-...+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-G~~~--k~T~A~y~L~dp~eV~~f 354 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV-SKFP--KDTDASYSLQDPSEVMDF 354 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE-CCCC--CCCcceEeCCCHHHHHHH
Confidence 999999999986 1 23589999999999999976 466666 4221 135688888776544433
No 74
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.75 E-value=6.4e-08 Score=92.19 Aligned_cols=114 Identities=21% Similarity=0.122 Sum_probs=82.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.|+.+++.| +++++||-....+.++++.+|+...-..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an---------------------------------- 112 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH---------------------------------- 112 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce----------------------------------
Confidence 68999999999999986 9999999999999999999998321000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.+.+++.. . .. .. ....+..|.
T Consensus 113 --------------------------------------~l~~~~~g---------------~-~t-G~---~~~~~~~K~ 134 (203)
T TIGR02137 113 --------------------------------------KLEIDDSD---------------R-VV-GY---QLRQKDPKR 134 (203)
T ss_pred --------------------------------------eeEEecCC---------------e-eE-Ce---eecCcchHH
Confidence 00000000 0 00 00 013456899
Q ss_pred HHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccc
Q 041225 478 GIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDF 527 (658)
Q Consensus 478 ~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~ 527 (658)
..++.+++. +..++++|||.||++|++.||+||++...+. ++++||-
T Consensus 135 ~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~--~~~~~~~ 181 (203)
T TIGR02137 135 QSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFHAPEN--VIREFPQ 181 (203)
T ss_pred HHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEecCCHH--HHHhCCC
Confidence 999999765 4589999999999999999999999955554 6666664
No 75
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.75 E-value=6.1e-08 Score=94.42 Aligned_cols=128 Identities=22% Similarity=0.316 Sum_probs=90.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.+++.+.|+.|+++|++++++||.....+..+++.+|+...-...+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~------------------------------- 133 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLE------------------------------- 133 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEE-------------------------------
Confidence 5889999999999999999999999999999999998887421000000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEE-cCcccH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCR-VAPLQK 476 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~-~~~~~K 476 (658)
.++.. .. ..+... ..+..|
T Consensus 134 -----------------------------------------~~~~~-------------~~------~~~~~~~~~~~~k 153 (219)
T TIGR00338 134 -----------------------------------------VEDGK-------------LT------GLVEGPIVDASYK 153 (219)
T ss_pred -----------------------------------------EECCE-------------EE------EEecCcccCCccc
Confidence 00000 00 000000 122347
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
..+++.+++. +++++++||||.+|++|.+.||+++++.+++ .++.+||+++.+.++...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~--~~~~~a~~~i~~~~~~~~~ 216 (219)
T TIGR00338 154 GKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKP--KLQQKADICINKKDLTDIL 216 (219)
T ss_pred HHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCH--HHHHhchhccCCCCHHHHH
Confidence 7777777665 4568999999999999999999999995543 4788999999888765443
No 76
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.69 E-value=3e-08 Score=85.76 Aligned_cols=56 Identities=11% Similarity=0.239 Sum_probs=47.8
Q ss_pred cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccccc
Q 041225 475 QKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQ 531 (658)
Q Consensus 475 ~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~ 531 (658)
+|..+.+.|++. ..++|+.+||-.||+|+|+.+|.++|. .++.+.++..||+|+..
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~-~dAh~~v~~~a~~Vt~~ 141 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV-ADAHPLLKQRADYVTSK 141 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc-cccCHHHHHhhHhhhhc
Confidence 677777777766 678999999999999999999999999 55666789999998753
No 77
>PLN02151 trehalose-phosphatase
Probab=98.62 E-value=8.2e-07 Score=90.23 Aligned_cols=223 Identities=12% Similarity=0.111 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHH--HHHHHhhhccceeeecccccc--ccCCChHHHHHHHHhcCCeEEEEecCChhHH
Q 041225 273 EELKQWQHRYEDASTSLVDRASKL--RQTAALIECDLTLLGATGIED--KLQDGVPEAIEALRQAGIKVWVLTGDKQDTA 348 (658)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~DgTllg~~~~~d--~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a 348 (658)
+++..|..++..+...+..-.... .+.++++|.||||+....--+ .+.++++++|++|. ++..++++|||+...+
T Consensus 71 ~~~~~w~~~~p~a~~~~~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l 149 (354)
T PLN02151 71 NKQSCWIKEHPSALNMFEEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKV 149 (354)
T ss_pred hhHHHHHHhCChHHHHHHHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHH
Confidence 456778877766655444322221 235678999999995432112 47889999999999 5679999999999998
Q ss_pred HHHHHHcCccCCCccEEEEcCCCH-------------------------HHHHHHHHHHHHhcCcccCccccccccccch
Q 041225 349 ISIALSCKLLTPDMQQIIINGNSE-------------------------EECKDLLADAKARYGVKSSNRTKCNSKLKRS 403 (658)
Q Consensus 349 ~~ia~~~gl~~~~~~~i~~~g~~~-------------------------~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 403 (658)
.....-.++ .+...+|... ..+.++.+.+.+.
T Consensus 150 ~~~~~~~~l-----~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~------------------ 206 (354)
T PLN02151 150 SSFVKLTEL-----YYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEK------------------ 206 (354)
T ss_pred HHHcCCccc-----eEEEeCCceeecCCCCccccccccccccccchhhHHHHHHHHHHHHHH------------------
Confidence 776542222 1222333210 0001111111100
Q ss_pred hHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccH--HHHHHHhhHH---hhh-hhhccCCeeEEEEcC-cccH
Q 041225 404 AEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSL--VYILEKDLES---DLF-DLATSCRVVLCCRVA-PLQK 476 (658)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~---~~~-~i~~s~~~~i~~~~~-~~~K 476 (658)
....+-. ..+ .+....++..-.... ...+...+.. ... --+..++.++++++. +.+|
T Consensus 207 --------~~~~pG~-~VE-------~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dK 270 (354)
T PLN02151 207 --------TKSIPGA-KVE-------NNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDK 270 (354)
T ss_pred --------HhcCCCC-EEE-------ecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCH
Confidence 0000000 000 011122222211111 1111121111 111 134567889999995 8999
Q ss_pred HHHHHHHHhc-C-----CCeEEEEcCCcCChhhhhhc-----ceeEEecCccchhhhhhcccccccccchHHH
Q 041225 477 AGIVDLIKSR-T-----DDMTLAIGDGANDVSMIQMA-----DVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 477 ~~~v~~L~~~-~-----~~~v~aiGDg~NDi~Ml~~A-----~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
|.+++.|.+. + ..-++++||-..|-.||+.. |+||-+ +... -...|++.+.+-.-...+
T Consensus 271 G~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-g~~~--k~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 271 GKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILV-SKYA--KETNASYSLQEPDEVMEF 340 (354)
T ss_pred HHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEe-ccCC--CCCcceEeCCCHHHHHHH
Confidence 9999999976 1 12489999999999999864 566666 3211 123688888777554444
No 78
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.61 E-value=1e-07 Score=86.66 Aligned_cols=54 Identities=20% Similarity=0.213 Sum_probs=44.4
Q ss_pred Hhhhccceeeecccc--------ccccCCChHHHHHHHHhcCCeEEEEecCChhHHH---HHHHH
Q 041225 301 ALIECDLTLLGATGI--------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAI---SIALS 354 (658)
Q Consensus 301 ~~~d~DgTllg~~~~--------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~---~ia~~ 354 (658)
+++|+||||+..-.+ ++.+++++.+++++++++|++++++|||+...+. ....+
T Consensus 2 VisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 2 VISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred EEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 468999999987311 1688999999999999999999999999998874 44444
No 79
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.58 E-value=1.1e-07 Score=85.08 Aligned_cols=130 Identities=18% Similarity=0.290 Sum_probs=88.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.++|++++.++.|+++|.++.++||--...+.+++.++||-..+- +.|.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~---yAN~---------------------------- 136 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNI---YANE---------------------------- 136 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhh---hhhe----------------------------
Confidence 588999999999999999999999999999999999999843210 0000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
+.++... .+.. ...-.-...+.-|+
T Consensus 137 ---------------------------------------l~fd~~G-----------k~~g-----fd~~~ptsdsggKa 161 (227)
T KOG1615|consen 137 ---------------------------------------LLFDKDG-----------KYLG-----FDTNEPTSDSGGKA 161 (227)
T ss_pred ---------------------------------------eeeccCC-----------cccc-----cccCCccccCCccH
Confidence 0000000 0000 00112334456899
Q ss_pred HHHHHHHhc-CCCeEEEEcCCcCChhhhhhcceeEEecCccc-hhhhhhccccccccc
Q 041225 478 GIVDLIKSR-TDDMTLAIGDGANDVSMIQMADVGVGICGQEG-RQAVMASDFAMGQFR 533 (658)
Q Consensus 478 ~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~-~~~k~~AD~vl~~~~ 533 (658)
.+|+.+++. ....++|+|||.||++|+..|+.=++..++-. ..+|..|+.-+.+|.
T Consensus 162 ~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 162 EVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred HHHHHHHhCCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHH
Confidence 999999987 56789999999999999999776666644432 235666666655554
No 80
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.52 E-value=5.1e-07 Score=86.61 Aligned_cols=118 Identities=24% Similarity=0.330 Sum_probs=81.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.|+.|+++|++++++||.....+..+++.+|+...-...+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~----------------------------- 130 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFD----------------------------- 130 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEc-----------------------------
Confidence 588999999999999999999999999999999999988632100000000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
... .. . +. ......+..|+
T Consensus 131 -------------------------------------------~~g---------------~~-~-p~-~~~~~~~~~k~ 149 (201)
T TIGR01491 131 -------------------------------------------EKG---------------FI-Q-PD-GIVRVTFDNKG 149 (201)
T ss_pred -------------------------------------------CCC---------------eE-e-cc-eeeEEccccHH
Confidence 000 00 0 00 11223455788
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcc
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD 526 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD 526 (658)
.+++.+++. ++++++++|||.||++|++.||+++++ +..+...+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~-~~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISL-GDEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEE-CCCccchhhccc
Confidence 888887655 457899999999999999999999999 443333444444
No 81
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.50 E-value=1.1e-07 Score=84.63 Aligned_cols=58 Identities=29% Similarity=0.338 Sum_probs=49.8
Q ss_pred Hhhhccceeeecccc-----ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 301 ALIECDLTLLGATGI-----EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 301 ~~~d~DgTllg~~~~-----~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
+++|.||||...... ..++.+++.+.+++|+++|++++++||+....+...+...|+.
T Consensus 2 ~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 2 VLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred eEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 368999999886321 1378899999999999999999999999999999999988874
No 82
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.24 E-value=1.1e-05 Score=77.63 Aligned_cols=122 Identities=21% Similarity=0.193 Sum_probs=83.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.++.|+++ ++++++||.....+..+...+|+...-...+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~------------------------------- 115 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLE------------------------------- 115 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEE-------------------------------
Confidence 5679999999999999 99999999999999999998887321000000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEE-EcCcccH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCC-RVAPLQK 476 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~-~~~~~~K 476 (658)
.++. ...+.. ...|..|
T Consensus 116 -----------------------------------------~~~~---------------------~~i~~~~~~~p~~k 133 (205)
T PRK13582 116 -----------------------------------------VDED---------------------GMITGYDLRQPDGK 133 (205)
T ss_pred -----------------------------------------ECCC---------------------CeEECccccccchH
Confidence 0000 000000 1235678
Q ss_pred HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccc-ccccccch
Q 041225 477 AGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDF-AMGQFRFL 535 (658)
Q Consensus 477 ~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~-vl~~~~~l 535 (658)
...++.+... +..+++||||.||++|.+.|++|++....+. .....+++ ++.++.-+
T Consensus 134 ~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~-~~~~~~~~~~~~~~~el 191 (205)
T PRK13582 134 RQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFRPPAN-VIAEFPQFPAVHTYDEL 191 (205)
T ss_pred HHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEECCCHH-HHHhCCcccccCCHHHH
Confidence 7888877765 5789999999999999999999998743322 23334554 66666544
No 83
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=98.22 E-value=3e-06 Score=83.30 Aligned_cols=196 Identities=16% Similarity=0.087 Sum_probs=84.6
Q ss_pred hhhccceeeecccccc--ccCCChHHHHHHHHhcC-CeEEEEecCChhHHHHHHH--HcCccCCCccEEEEcCC------
Q 041225 302 LIECDLTLLGATGIED--KLQDGVPEAIEALRQAG-IKVWVLTGDKQDTAISIAL--SCKLLTPDMQQIIINGN------ 370 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d--~l~~~~~~aI~~l~~~G-I~v~i~TGr~~~~a~~ia~--~~gl~~~~~~~i~~~g~------ 370 (658)
++|.||||.....-.+ .+.+++.++|++|.+.. ..|+|+|||+......... .++++..++-.+...+.
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~ 80 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNL 80 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-T
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccccccc
Confidence 4799999998755222 45688999999998775 4899999999988555432 23333344443333322
Q ss_pred ----CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCc----
Q 041225 371 ----SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGN---- 442 (658)
Q Consensus 371 ----~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---- 442 (658)
..+....+.+.++.... ...+..+ ..+...+.+.....
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~-----------------------~~pG~~i-----------E~K~~sv~~Hyr~~~~~~ 126 (235)
T PF02358_consen 81 PADEDLEWKDEVREILEYFAE-----------------------RTPGSFI-----------EDKEFSVAFHYRNAPPEF 126 (235)
T ss_dssp TGGGGHHHHHHHHHHHTTHHH-----------------------HSTT-EE-----------EEETTEEEEE-TTS-ST-
T ss_pred ccccchHHHHHHHHHHHHHHh-----------------------hccCcEE-----------EECCeEEEEEecCCCcch
Confidence 01111111111111000 0000000 00111122221111
Q ss_pred ------cHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcC------CCeEEEEcCCcCChhhhhhc---
Q 041225 443 ------SLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRT------DDMTLAIGDGANDVSMIQMA--- 507 (658)
Q Consensus 443 ------~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~------~~~v~aiGDg~NDi~Ml~~A--- 507 (658)
++...+.+........-+..++.++++++.+.+||.+++.|.+.. ..-++++||...|-.||+..
T Consensus 127 ~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 127 GEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALREL 206 (235)
T ss_dssp ---THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS
T ss_pred hhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhc
Confidence 111111121222212234566788999999999999999999882 24799999999999999974
Q ss_pred ---ceeEEecCccchhhhhhccccccc
Q 041225 508 ---DVGVGICGQEGRQAVMASDFAMGQ 531 (658)
Q Consensus 508 ---~vgIam~~~~~~~~k~~AD~vl~~ 531 (658)
+++|-+..........+|++-+.+
T Consensus 207 ~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 207 EEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp ----EEEEES-----------------
T ss_pred ccCCCCeEEEeeccccccccccccccc
Confidence 456666333222244566665544
No 84
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.21 E-value=3e-06 Score=81.29 Aligned_cols=41 Identities=10% Similarity=0.007 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.+++.+.|+.++++|++++++||.....+..+++.+|+.
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~ 127 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID 127 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc
Confidence 68899999999999999999999999999999999998873
No 85
>PLN02954 phosphoserine phosphatase
Probab=98.13 E-value=1.6e-05 Score=77.58 Aligned_cols=41 Identities=24% Similarity=0.498 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.+.++.|+++|++++|+||.....+..+++.+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999999998874
No 86
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.12 E-value=8.7e-06 Score=76.26 Aligned_cols=41 Identities=22% Similarity=0.248 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+.++.++++|++++++||.....+.+++..+|+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 46799999999999999999999999999999999988873
No 87
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.12 E-value=1.2e-05 Score=76.34 Aligned_cols=38 Identities=26% Similarity=0.337 Sum_probs=35.5
Q ss_pred CChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 321 DGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 321 ~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
+++.+.|+.++++|++++|+||.....+.++++.+|+.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC
Confidence 77779999999999999999999999999999999884
No 88
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.06 E-value=1.9e-05 Score=76.37 Aligned_cols=39 Identities=15% Similarity=0.324 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK 356 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~g 356 (658)
+++|++.+.++.|+++|++++|+||.....+.++++.++
T Consensus 70 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~ 108 (214)
T TIGR03333 70 EIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIV 108 (214)
T ss_pred cccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhC
Confidence 799999999999999999999999999888888887664
No 89
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.04 E-value=1.5e-05 Score=70.74 Aligned_cols=57 Identities=25% Similarity=0.303 Sum_probs=45.3
Q ss_pred Hhhhccceeeecccc-----ccccCCChHHHHHHHHhcCCeEEEEecCC--------hhHHHHHHHHcCc
Q 041225 301 ALIECDLTLLGATGI-----EDKLQDGVPEAIEALRQAGIKVWVLTGDK--------QDTAISIALSCKL 357 (658)
Q Consensus 301 ~~~d~DgTllg~~~~-----~d~l~~~~~~aI~~l~~~GI~v~i~TGr~--------~~~a~~ia~~~gl 357 (658)
+++|+||||++.... +..+.+++.++++.|+++|++++++|+.. ...+..+.+.+++
T Consensus 3 ~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 3 VVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred EEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 468999999963111 23678999999999999999999999998 5666667776665
No 90
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.00 E-value=4.1e-05 Score=73.51 Aligned_cols=108 Identities=14% Similarity=0.173 Sum_probs=77.6
Q ss_pred ccCCChHHHHH-HHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccc
Q 041225 318 KLQDGVPEAIE-ALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 318 ~l~~~~~~aI~-~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
.+.|++.++|+ .++++|++++++|+-....+.++++..++... ..+|...- +
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~l-e------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQI-E------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEe-E-------------------------
Confidence 57899999996 78889999999999999999999988665332 12222110 0
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
+.+| .......+.+..|
T Consensus 147 -----------------------------------------~~~g----------------------g~~~g~~c~g~~K 163 (210)
T TIGR01545 147 -----------------------------------------RGNG----------------------GWVLPLRCLGHEK 163 (210)
T ss_pred -----------------------------------------EeCC----------------------ceEcCccCCChHH
Confidence 0000 0112345667889
Q ss_pred HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecC
Q 041225 477 AGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICG 515 (658)
Q Consensus 477 ~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~ 515 (658)
...++.....+.....|-|||.||.|||+.||.+++++.
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 888876664334567899999999999999999999943
No 91
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.94 E-value=4.2e-05 Score=72.35 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=37.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+.++.|+++|++++++|+.....+..+....|+.
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 78899999999999999999999999999999988888874
No 92
>PRK11590 hypothetical protein; Provisional
Probab=97.92 E-value=0.00012 Score=70.64 Aligned_cols=108 Identities=15% Similarity=0.120 Sum_probs=77.8
Q ss_pred ccCCChHHHH-HHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccc
Q 041225 318 KLQDGVPEAI-EALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 318 ~l~~~~~~aI-~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
.+.|++.+.| +.++++|++++++||.....+.+++..+|+.. ...+|...-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l--------------------------- 146 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQM--------------------------- 146 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEE---------------------------
Confidence 4589999999 56888999999999999999999999988622 222322110
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
+ . ..........+.+..|
T Consensus 147 ----------------------------------------------~---------------~-~~tg~~~g~~c~g~~K 164 (211)
T PRK11590 147 ----------------------------------------------Q---------------R-RYGGWVLTLRCLGHEK 164 (211)
T ss_pred ----------------------------------------------E---------------E-EEccEECCccCCChHH
Confidence 0 0 0001122344667888
Q ss_pred HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecC
Q 041225 477 AGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICG 515 (658)
Q Consensus 477 ~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~ 515 (658)
...++.....+.....|-||+.||+|||+.|+.+++++.
T Consensus 165 ~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 165 VAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred HHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 888887654345667899999999999999999999943
No 93
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=97.92 E-value=0.00035 Score=68.55 Aligned_cols=172 Identities=15% Similarity=0.108 Sum_probs=99.6
Q ss_pred HHHhhhccceeeecccccc--ccCCChHHHHHHHHhc-CCeEEEEecCChhHHHHHHH--HcCccCCCccEE-EEcCC--
Q 041225 299 TAALIECDLTLLGATGIED--KLQDGVPEAIEALRQA-GIKVWVLTGDKQDTAISIAL--SCKLLTPDMQQI-IINGN-- 370 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d--~l~~~~~~aI~~l~~~-GI~v~i~TGr~~~~a~~ia~--~~gl~~~~~~~i-~~~g~-- 370 (658)
..+++|.||||....-..+ .+.++..+++++|... ...++|+|||+......... .+|++..+|-.+ ..+|.
T Consensus 19 ~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~ 98 (266)
T COG1877 19 RLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWW 98 (266)
T ss_pred eEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCee
Confidence 4578999999998754333 3567889999999888 45799999999998877765 333444444333 23332
Q ss_pred ----CHH------HHHHHHHHHHHhcC-cccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE
Q 041225 371 ----SEE------ECKDLLADAKARYG-VKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII 439 (658)
Q Consensus 371 ----~~~------~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 439 (658)
... ++.++++..-.... ..... +-..+.+..
T Consensus 99 ~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~--------------------------------------K~~a~~~Hy 140 (266)
T COG1877 99 INLAEEADLRWLKEVAAILEYYVERTPGSYIER--------------------------------------KGFAVALHY 140 (266)
T ss_pred EecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEE--------------------------------------cCcEEEEee
Confidence 111 12222222211110 00000 000111111
Q ss_pred eC--ccH--HHHHHHhhH-Hhhh-hhhccCCeeEEEEcCcccHHHHHHHHHhc-CC--CeEEEEcCCcCChhhhhhcc
Q 041225 440 DG--NSL--VYILEKDLE-SDLF-DLATSCRVVLCCRVAPLQKAGIVDLIKSR-TD--DMTLAIGDGANDVSMIQMAD 508 (658)
Q Consensus 440 ~~--~~~--~~~~~~~~~-~~~~-~i~~s~~~~i~~~~~~~~K~~~v~~L~~~-~~--~~v~aiGDg~NDi~Ml~~A~ 508 (658)
.. +.. ...+..... .... --+..++.+|++++.+.+||.+++.+.+. +. .-+++.||..-|=.||+..+
T Consensus 141 r~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 141 RNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred ccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 10 000 011111100 0111 22455678999999999999999988887 22 35999999999999999987
No 94
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.86 E-value=7.1e-05 Score=73.14 Aligned_cols=41 Identities=24% Similarity=0.320 Sum_probs=37.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|+++|++++++||.....+..+.+.+|+.
T Consensus 93 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 93 RLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 68899999999999999999999999999888888888874
No 95
>PRK08238 hypothetical protein; Validated
Probab=97.86 E-value=0.0003 Score=75.77 Aligned_cols=40 Identities=25% Similarity=0.266 Sum_probs=37.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.+++.+.+++++++|++++++||.+...+..+++.+|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999999999987
No 96
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.85 E-value=7.3e-05 Score=72.63 Aligned_cols=38 Identities=13% Similarity=0.321 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC 355 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~ 355 (658)
++.|++.+.++.|+++|++++|+||-....+..+.+..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 68999999999999999999999999998888888876
No 97
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.72 E-value=8.2e-05 Score=72.28 Aligned_cols=43 Identities=26% Similarity=0.284 Sum_probs=39.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
.+-|++.+++..|+++|++..++|+++...+..+.+..|+...
T Consensus 89 ~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~ 131 (220)
T COG0546 89 RLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADY 131 (220)
T ss_pred ccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccc
Confidence 5779999999999999999999999999999999999998554
No 98
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.71 E-value=0.00016 Score=69.57 Aligned_cols=41 Identities=32% Similarity=0.431 Sum_probs=37.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+.|++|+++|++++++||.....+..+.+..|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 67899999999999999999999999988888888888874
No 99
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.70 E-value=8.8e-05 Score=69.32 Aligned_cols=46 Identities=24% Similarity=0.343 Sum_probs=35.9
Q ss_pred HHhhhccceeeecccc-----ccccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 300 AALIECDLTLLGATGI-----EDKLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~-----~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
++++|.||||+...+. +-++.|++.++|+.|+++|++++++|.-+.
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 3 AIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred EEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4678999999942111 113568999999999999999999998663
No 100
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.69 E-value=0.00014 Score=72.99 Aligned_cols=40 Identities=15% Similarity=0.306 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.+++.++|+.|+++|++++++||.+...+..+....++
T Consensus 101 ~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 101 VVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 6789999999999999999999999988888888777776
No 101
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=97.68 E-value=0.00011 Score=72.88 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=53.2
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec---CChhHHHHHHHHcCccCCCccEEEEcCC
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG---DKQDTAISIALSCKLLTPDMQQIIINGN 370 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG---r~~~~a~~ia~~~gl~~~~~~~i~~~g~ 370 (658)
+++|+||||+.. .+.+ +++.++|++|+++|++++++|| |+...+....+.+|+-...++++..++.
T Consensus 4 ~~~D~DGtl~~~---~~~i-~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~ 72 (249)
T TIGR01457 4 YLIDLDGTMYKG---KERI-PEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMA 72 (249)
T ss_pred EEEeCCCceEcC---CeeC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHH
Confidence 468999999985 3344 5899999999999999999995 8888888888899986665666655443
No 102
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.67 E-value=0.00015 Score=70.08 Aligned_cols=41 Identities=22% Similarity=0.268 Sum_probs=37.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|+++|++++++|+.+...+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 68899999999999999999999999998999998888874
No 103
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.67 E-value=0.00018 Score=70.17 Aligned_cols=42 Identities=19% Similarity=0.231 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++-|++.++|+.|+++|++++++||.....+..+.+..++..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 688999999999999999999999999998888888888743
No 104
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.60 E-value=9.7e-05 Score=71.75 Aligned_cols=36 Identities=14% Similarity=0.296 Sum_probs=31.7
Q ss_pred hHHHHHHHHhcCCeEEEEecC----ChhHHHHHHHHcCcc
Q 041225 323 VPEAIEALRQAGIKVWVLTGD----KQDTAISIALSCKLL 358 (658)
Q Consensus 323 ~~~aI~~l~~~GI~v~i~TGr----~~~~a~~ia~~~gl~ 358 (658)
+.+.++.++++|+++.++|+| ...++..+.+.+|+.
T Consensus 119 a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 889999999999999999999 556788888888873
No 105
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.60 E-value=0.0001 Score=75.52 Aligned_cols=59 Identities=24% Similarity=0.228 Sum_probs=50.8
Q ss_pred HHhhhccceeeecccc---------ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 300 AALIECDLTLLGATGI---------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~---------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.+|.|||+.....- .+.+.+++.++|+.|+++|++++++|||+...+..+.+.+++.
T Consensus 160 ~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 160 AVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred EEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 4678999999976442 4578899999999999999999999999999999888888763
No 106
>PRK06769 hypothetical protein; Validated
Probab=97.56 E-value=0.00023 Score=66.14 Aligned_cols=46 Identities=26% Similarity=0.296 Sum_probs=37.3
Q ss_pred HHhhhccceeeecccccc----ccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 300 AALIECDLTLLGATGIED----KLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d----~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
.+++|.|||+.+...+.. ++-|++.+++++|+++|++++++|+.+.
T Consensus 6 ~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 6 AIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred EEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 457899999977644332 3579999999999999999999998753
No 107
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.54 E-value=0.0013 Score=65.03 Aligned_cols=44 Identities=18% Similarity=0.358 Sum_probs=40.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPD 361 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~ 361 (658)
+++|++.+.++.|+++|+++.++||-....+..+.+++|+..++
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 68999999999999999999999999999999999999986544
No 108
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.50 E-value=0.00039 Score=65.28 Aligned_cols=46 Identities=30% Similarity=0.307 Sum_probs=35.8
Q ss_pred HHHhhhccceeeecc-cccc-----ccCCChHHHHHHHHhcCCeEEEEecCC
Q 041225 299 TAALIECDLTLLGAT-GIED-----KLQDGVPEAIEALRQAGIKVWVLTGDK 344 (658)
Q Consensus 299 ~~~~~d~DgTllg~~-~~~d-----~l~~~~~~aI~~l~~~GI~v~i~TGr~ 344 (658)
+.+++|.||||.-.. .+.+ .+.|++.+++++|+++|++++++|..+
T Consensus 4 ~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 4 KAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred cEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 456899999976543 1111 256899999999999999999999876
No 109
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.48 E-value=0.00038 Score=67.38 Aligned_cols=41 Identities=22% Similarity=0.163 Sum_probs=37.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|+++|+++.++||.....+..+.+..|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47799999999999999999999999998888888888874
No 110
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.43 E-value=0.00013 Score=71.56 Aligned_cols=67 Identities=18% Similarity=0.236 Sum_probs=55.6
Q ss_pred HHHhhhccceeeeccccccc--cC-CChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcC
Q 041225 299 TAALIECDLTLLGATGIEDK--LQ-DGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIING 369 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~--l~-~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g 369 (658)
.++++|+||||++. +++ ++ |++.+++++|+++|++++++|+.....+....+.+|+...-+ .+..+|
T Consensus 127 kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFd-vIIs~G 196 (301)
T TIGR01684 127 HVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFD-IIISGG 196 (301)
T ss_pred eEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccC-EEEECC
Confidence 56889999999997 445 45 999999999999999999999999999999999999965432 344443
No 111
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.42 E-value=0.00043 Score=62.48 Aligned_cols=44 Identities=27% Similarity=0.293 Sum_probs=35.7
Q ss_pred Hhhhccceeeeccccc-------cccCCChHHHHHHHHhcCCeEEEEecCC
Q 041225 301 ALIECDLTLLGATGIE-------DKLQDGVPEAIEALRQAGIKVWVLTGDK 344 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~-------d~l~~~~~~aI~~l~~~GI~v~i~TGr~ 344 (658)
.++|.||||.....-. -++.|++.++++.|+++|++++++|+.+
T Consensus 3 ~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 3 LFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 3589999999864200 1358999999999999999999999875
No 112
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.41 E-value=0.00087 Score=67.16 Aligned_cols=41 Identities=17% Similarity=0.255 Sum_probs=37.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++-|++.+.++.|+++|+++.++|+.....+..+.+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57799999999999999999999999999999998888874
No 113
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=97.40 E-value=0.0046 Score=71.38 Aligned_cols=56 Identities=18% Similarity=0.062 Sum_probs=43.0
Q ss_pred HHHhhhccceeeecccc-----ccccCCChHHHHHHHHhc-CCeEEEEecCChhHHHHHHHH
Q 041225 299 TAALIECDLTLLGATGI-----EDKLQDGVPEAIEALRQA-GIKVWVLTGDKQDTAISIALS 354 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~-----~d~l~~~~~~aI~~l~~~-GI~v~i~TGr~~~~a~~ia~~ 354 (658)
.++++|.||||.....- .-.+.++..+++++|.+. +..|+|+|||+..........
T Consensus 508 rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 569 (797)
T PLN03063 508 RLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE 569 (797)
T ss_pred eEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence 45689999999964220 112667889999999865 789999999999998877654
No 114
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.40 E-value=0.00016 Score=63.48 Aligned_cols=56 Identities=14% Similarity=0.188 Sum_probs=43.4
Q ss_pred Hhhhccceeeeccc---ccc------ccCCChHHHHHHHHhcCCeEEEEecC-ChhHHHHHHHHcC
Q 041225 301 ALIECDLTLLGATG---IED------KLQDGVPEAIEALRQAGIKVWVLTGD-KQDTAISIALSCK 356 (658)
Q Consensus 301 ~~~d~DgTllg~~~---~~d------~l~~~~~~aI~~l~~~GI~v~i~TGr-~~~~a~~ia~~~g 356 (658)
+.+|+||||.+.-. .++ ++.+++.+.++.|+++|++++++|+. ....+..+.+..+
T Consensus 3 i~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 3 IVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred EEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 45799999998721 122 25789999999999999999999999 6666666655544
No 115
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.36 E-value=0.00075 Score=66.03 Aligned_cols=41 Identities=24% Similarity=0.156 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.+.++.|+++|+++.++|+.+...+..+.+..|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999888777777777763
No 116
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.35 E-value=0.00035 Score=64.36 Aligned_cols=48 Identities=21% Similarity=0.339 Sum_probs=36.7
Q ss_pred HHHHhhhccceeeeccccc----c--c---cCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 298 QTAALIECDLTLLGATGIE----D--K---LQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 298 ~~~~~~d~DgTllg~~~~~----d--~---l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
...+++|+||||+....-. + + +-|++.++|++|+++|+++.++|..+.
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred CcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3557889999999753211 0 1 348999999999999999999997543
No 117
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.31 E-value=8.2e-05 Score=64.27 Aligned_cols=50 Identities=14% Similarity=0.121 Sum_probs=40.0
Q ss_pred HHhhhccceeeecc-c--cccccCCChHHHHHHHHhcCCeEEEEecCChhHHH
Q 041225 300 AALIECDLTLLGAT-G--IEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAI 349 (658)
Q Consensus 300 ~~~~d~DgTllg~~-~--~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~ 349 (658)
.+++|+||||+..- + ..+++.+++.+++++++++|+.++++|||+.....
T Consensus 3 ~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 3 RLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred EEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 45789999998642 1 12457789999999999999999999999987754
No 118
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.31 E-value=0.00038 Score=63.67 Aligned_cols=44 Identities=27% Similarity=0.372 Sum_probs=35.4
Q ss_pred HHhhhccceeeeccccc--------cccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 300 AALIECDLTLLGATGIE--------DKLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~--------d~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
+.++|.||||....+.. -++-|++.++|++|+++|++++++|..
T Consensus 3 ~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 3 ILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred EEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999998854311 135689999999999999999999975
No 119
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.29 E-value=0.0012 Score=65.77 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=38.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++.+++.+.|+.|+++|++++++|+.+...+..+....|+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 578999999999999999999999999999998888888743
No 120
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=97.19 E-value=0.0056 Score=70.66 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=40.8
Q ss_pred hccCCeeEEEEcCcccHHHHHHHHHhc---------CCCeEEEEcCCcC-Chhhhhhcc
Q 041225 460 ATSCRVVLCCRVAPLQKAGIVDLIKSR---------TDDMTLAIGDGAN-DVSMIQMAD 508 (658)
Q Consensus 460 ~~s~~~~i~~~~~~~~K~~~v~~L~~~---------~~~~v~aiGDg~N-Di~Ml~~A~ 508 (658)
+..++.++++++.+.+||.+++.+.+. +.+-|+++||..- |=.||+.-.
T Consensus 753 V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~ 811 (934)
T PLN03064 753 VVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFE 811 (934)
T ss_pred EEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHh
Confidence 456778999999999999999999874 2467999999654 999999754
No 121
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.18 E-value=0.0016 Score=63.20 Aligned_cols=41 Identities=34% Similarity=0.336 Sum_probs=38.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+.++.|+++|+++.++||.....+..+.+..|+.
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 68899999999999999999999999999999988888874
No 122
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=97.15 E-value=0.00069 Score=61.23 Aligned_cols=56 Identities=20% Similarity=0.131 Sum_probs=45.7
Q ss_pred Hhhhccceeeeccc------ccc-----------------ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 301 ALIECDLTLLGATG------IED-----------------KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 301 ~~~d~DgTllg~~~------~~d-----------------~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
..+|+|+||+.... -.+ .++|++.+.++.|+ +++++.++|+-+...+..+.+.+++
T Consensus 5 lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 5 LVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 45789999998631 011 56899999999998 6799999999999999998888776
No 123
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.13 E-value=0.0015 Score=60.55 Aligned_cols=56 Identities=18% Similarity=0.310 Sum_probs=43.3
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCC-hhHHHHHHHHcCc
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDK-QDTAISIALSCKL 357 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~-~~~a~~ia~~~gl 357 (658)
++++|.|||+...- ...+.+++.++++.|++.|++++++|+.+ ...+..+.+.+|+
T Consensus 27 ~vv~D~Dgtl~~~~--~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 27 GVVLDKDNTLVYPD--HNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred EEEEecCCccccCC--CCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 35678999998641 23678999999999999999999999987 4555555555554
No 124
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.08 E-value=0.0028 Score=65.82 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=38.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
.+.+++.+.|+.|+++|+++.++|+.+...+..+.+..|+..
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~ 257 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG 257 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH
Confidence 577999999999999999999999999999999999888743
No 125
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.06 E-value=0.00058 Score=67.24 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=51.7
Q ss_pred HHHhhhccceeeecccccccc---CCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 299 TAALIECDLTLLGATGIEDKL---QDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l---~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
..+++|+||||+.. ++++ .|++.++|++|+++|++++++|+.+...+..+....|+...
T Consensus 129 ~~i~~D~D~TL~~~---~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y 190 (303)
T PHA03398 129 HVIVFDLDSTLITD---EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY 190 (303)
T ss_pred cEEEEecCCCccCC---CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc
Confidence 46789999999997 5565 48999999999999999999998888888999999999644
No 126
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.02 E-value=0.0039 Score=62.03 Aligned_cols=42 Identities=31% Similarity=0.287 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++-|++.+.|+.|+++|+++.++||.+...+..+.+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 577899999999999999999999999998888888887643
No 127
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.01 E-value=0.00083 Score=69.25 Aligned_cols=55 Identities=24% Similarity=0.324 Sum_probs=44.6
Q ss_pred HHhhhccceeeecccccc--------ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH
Q 041225 300 AALIECDLTLLGATGIED--------KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS 354 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d--------~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~ 354 (658)
.+.+|.|.||-+-+.-++ ++.+++.++|+.|+++|+++.+||..+...+..+.+.
T Consensus 5 ~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 5 VLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred EEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 456899999976543244 2347899999999999999999999999988887766
No 128
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.01 E-value=0.0033 Score=68.41 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++.|++.+.|+.|+++|+++.++|+.....+..+.+.+|+..
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~ 371 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ 371 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh
Confidence 678999999999999999999999999999999998888743
No 129
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=97.01 E-value=0.0042 Score=55.17 Aligned_cols=55 Identities=22% Similarity=0.286 Sum_probs=48.2
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
+.+|.|.||+.-- .....|+.++-+.+++++|+++.++|-.+...+...+..+|+
T Consensus 31 vi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 31 VILDLDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred EEEeccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 4568999999862 345789999999999999999999999999999999999887
No 130
>PRK11587 putative phosphatase; Provisional
Probab=96.97 E-value=0.0037 Score=60.61 Aligned_cols=40 Identities=18% Similarity=0.148 Sum_probs=33.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.|++.+.|+.|+++|++++++|+.+...+.......++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999887766655555555
No 131
>PLN02645 phosphoglycolate phosphatase
Probab=96.93 E-value=0.0013 Score=67.56 Aligned_cols=61 Identities=26% Similarity=0.440 Sum_probs=48.5
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHH---HHcCccCCCcc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA---LSCKLLTPDMQ 363 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia---~~~gl~~~~~~ 363 (658)
..+++|+||||+.. +.+-+++.++|++|+++|++++++|+++..+...++ +.+|+....+.
T Consensus 29 ~~~~~D~DGtl~~~----~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~ 92 (311)
T PLN02645 29 ETFIFDCDGVIWKG----DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEE 92 (311)
T ss_pred CEEEEeCcCCeEeC----CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhh
Confidence 45689999999984 356699999999999999999999999976666555 56777544333
No 132
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.90 E-value=0.0083 Score=59.33 Aligned_cols=59 Identities=14% Similarity=0.207 Sum_probs=43.3
Q ss_pred HHHhhhccceeeecccc------c-----------------cccCCChHHHHHHHHhcCCeEEEEecCChhHHH---HHH
Q 041225 299 TAALIECDLTLLGATGI------E-----------------DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAI---SIA 352 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~------~-----------------d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~---~ia 352 (658)
.++.+|+|+|+|..... . .++-|++.+.++.++++|++++++|+|...... ...
T Consensus 76 ~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~L 155 (266)
T TIGR01533 76 YAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNL 155 (266)
T ss_pred CEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHH
Confidence 47889999999865411 1 124588899999999999999999999854433 334
Q ss_pred HHcCc
Q 041225 353 LSCKL 357 (658)
Q Consensus 353 ~~~gl 357 (658)
+..|+
T Consensus 156 kk~Gi 160 (266)
T TIGR01533 156 KRFGF 160 (266)
T ss_pred HHcCc
Confidence 45555
No 133
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.86 E-value=0.0032 Score=60.36 Aligned_cols=30 Identities=17% Similarity=0.276 Sum_probs=26.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
+.-|.+.++++.++++|++|+++|||+...
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 456789999999999999999999999755
No 134
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.85 E-value=0.0013 Score=65.41 Aligned_cols=64 Identities=17% Similarity=0.182 Sum_probs=47.3
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhH---HHHHHHHcCccCCCccE
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDT---AISIALSCKLLTPDMQQ 364 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~---a~~ia~~~gl~~~~~~~ 364 (658)
+++|+||||+......+.+.|++.++|++|+++|++++++|||+..+ .......+|+-...+++
T Consensus 4 i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i 70 (257)
T TIGR01458 4 VLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEV 70 (257)
T ss_pred EEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHe
Confidence 56899999997522111288899999999999999999999988775 45555667764333333
No 135
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.83 E-value=0.0039 Score=55.77 Aligned_cols=49 Identities=22% Similarity=0.259 Sum_probs=40.0
Q ss_pred hhhccceeeec---------cccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHH
Q 041225 302 LIECDLTLLGA---------TGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISI 351 (658)
Q Consensus 302 ~~d~DgTllg~---------~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~i 351 (658)
+.|+|||+-.+ +| .|..++++.+..+.++++|++++-+|+|+...+...
T Consensus 3 vsDIDGTiT~SD~~G~i~~~~G-~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~T 60 (157)
T PF08235_consen 3 VSDIDGTITKSDVLGHILPILG-KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRT 60 (157)
T ss_pred EEeccCCcCccchhhhhhhccC-chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHH
Confidence 45788887655 45 567899999999999999999999999998665443
No 136
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.81 E-value=0.013 Score=58.70 Aligned_cols=41 Identities=29% Similarity=0.263 Sum_probs=35.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+-|++.++|+.|+++|+++.++||.....+..+.+..++.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56789999999999999999999999988887777766653
No 137
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.79 E-value=0.0058 Score=60.56 Aligned_cols=42 Identities=17% Similarity=0.128 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++-|++.++++.|+++|+++.++|+.+...+....+..|+..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 567899999999999999999999999999999998888754
No 138
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.75 E-value=0.0031 Score=64.98 Aligned_cols=45 Identities=27% Similarity=0.334 Sum_probs=36.6
Q ss_pred HHHhhhccceeeecccc--------ccccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 299 TAALIECDLTLLGATGI--------EDKLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~--------~d~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
...++|.|||+.-...- +-++.|++.++|+.|+++|++++|+|+.
T Consensus 3 k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 3 KILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred cEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 34679999999985320 1357799999999999999999999984
No 139
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.71 E-value=0.0047 Score=60.05 Aligned_cols=40 Identities=13% Similarity=0.232 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCC----hhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDK----QDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~----~~~a~~ia~~~gl 357 (658)
.+-+++++.|+.++++|+++.++|||. ..++..+.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 466789999999999999999999996 3466777766776
No 140
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.69 E-value=0.01 Score=57.69 Aligned_cols=41 Identities=15% Similarity=0.210 Sum_probs=36.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++|+.|+++|++++++|+.....+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999999888888888887763
No 141
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.63 E-value=0.0063 Score=60.06 Aligned_cols=55 Identities=9% Similarity=0.128 Sum_probs=43.6
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHH--HHHHHcCcc
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAI--SIALSCKLL 358 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~--~ia~~~gl~ 358 (658)
...+|.|||+... ..+-|++.++|++|+++|++++++|..+...+. .....+|+.
T Consensus 10 ~~~~D~dG~l~~~----~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 10 VFLLDLWGVIIDG----NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred EEEEecccccccC----CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 4578999999873 467899999999999999999999986654433 455677763
No 142
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=96.63 E-value=0.021 Score=66.47 Aligned_cols=85 Identities=14% Similarity=0.047 Sum_probs=56.7
Q ss_pred ccCcEEEEEeCcc---HHHHHHHhhHHhhh--hhhccC-CeeEEEEcCcccHHHHHHHHHhc---CCCeE-EEEcCCcC-
Q 041225 431 AIASLALIIDGNS---LVYILEKDLESDLF--DLATSC-RVVLCCRVAPLQKAGIVDLIKSR---TDDMT-LAIGDGAN- 499 (658)
Q Consensus 431 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~--~i~~s~-~~~i~~~~~~~~K~~~v~~L~~~---~~~~v-~aiGDg~N- 499 (658)
..+++.+.+.... ....+++.+...-+ .++.++ ...+++.+...+|+.+|+.|..+ +..+| +.+||+.|
T Consensus 906 ~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGnt 985 (1050)
T TIGR02468 906 TDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDT 985 (1050)
T ss_pred CCceEEEEecCcccCccHHHHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCC
Confidence 3455555533332 23444444444332 233443 47899999999999999999988 55666 55999999
Q ss_pred Chh-hhhhcceeEEecC
Q 041225 500 DVS-MIQMADVGVGICG 515 (658)
Q Consensus 500 Di~-Ml~~A~vgIam~~ 515 (658)
|.+ ||.--+-+|-+.|
T Consensus 986 D~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 986 DYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred CHHHHhCCceeEEEEec
Confidence 966 6667778887755
No 143
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.60 E-value=0.011 Score=59.72 Aligned_cols=38 Identities=26% Similarity=0.305 Sum_probs=32.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC 355 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~ 355 (658)
++.|++.+.++.|+++|+++.++|+.+...+..+....
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998887777665544
No 144
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.55 E-value=0.039 Score=59.28 Aligned_cols=137 Identities=15% Similarity=0.312 Sum_probs=93.8
Q ss_pred EEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh--hhhhhcceeEEecCccchh-------------hh---------
Q 041225 467 LCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV--SMIQMADVGVGICGQEGRQ-------------AV--------- 522 (658)
Q Consensus 467 i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi--~Ml~~A~vgIam~~~~~~~-------------~k--------- 522 (658)
++-..+|..--..|+.++++ ++.|++.|-..|-- -.+-.||++||+..-+... ..
T Consensus 971 LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglspl 1049 (1354)
T KOG4383|consen 971 LFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPL 1049 (1354)
T ss_pred eccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCce
Confidence 45666777778889999998 78999999998843 3457799999884322210 01
Q ss_pred --------hhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHH
Q 041225 523 --------MASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSL 593 (658)
Q Consensus 523 --------~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~ 593 (658)
-+.|+....-..++..-++ -.|.....+++.++|.++..+.+..++|...++ .-+..++.-.++|.+.
T Consensus 1050 QiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~---~LP~i~s~sdii~lSc 1126 (1354)
T KOG4383|consen 1050 QISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFF---FLPIIFSHSDIILLSC 1126 (1354)
T ss_pred eecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH---hccchhccchHHHHHH
Confidence 1223333333445555555 578888889999999999999888888877776 4456677777777653
Q ss_pred HHhhhhhhhhe-ecccC
Q 041225 594 LYTSVPTIVVG-IVDKD 609 (658)
Q Consensus 594 ~~~~~p~~~~~-~~~~~ 609 (658)
+ ..|.++++ ++.+.
T Consensus 1127 f--c~PlL~i~tL~gk~ 1141 (1354)
T KOG4383|consen 1127 F--CIPLLFIGTLFGKF 1141 (1354)
T ss_pred H--HHHHHHHHHHhcCC
Confidence 3 46777777 44443
No 145
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.51 E-value=0.014 Score=56.69 Aligned_cols=41 Identities=20% Similarity=0.169 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.+.++.|+++|++++++|+.+...+.......|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 67899999999999999999999998888887777777763
No 146
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.46 E-value=0.0073 Score=57.53 Aligned_cols=43 Identities=21% Similarity=0.141 Sum_probs=37.6
Q ss_pred ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 316 EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 316 ~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
..++.+...++++.|+++|+++.++||.+...+..+.+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 3356667799999999999999999999999999999998874
No 147
>PRK10444 UMP phosphatase; Provisional
Probab=96.37 E-value=0.0036 Score=61.74 Aligned_cols=60 Identities=18% Similarity=0.224 Sum_probs=48.5
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH---cCccCCCccE
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS---CKLLTPDMQQ 364 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~---~gl~~~~~~~ 364 (658)
+.+|+||||+.. +.+.|++.++|++|+++|++++++|||+..+...++++ +|+-...+++
T Consensus 4 v~~DlDGtL~~~----~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i 66 (248)
T PRK10444 4 VICDIDGVLMHD----NVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVF 66 (248)
T ss_pred EEEeCCCceEeC----CeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhE
Confidence 468999999984 47889999999999999999999999999888777665 4664333333
No 148
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.36 E-value=0.023 Score=52.40 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=41.7
Q ss_pred ceeeeccccccccCCChHHHHHHHHhcCCeEEEEecC-ChhHHHHHHHHcCcc
Q 041225 307 LTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGD-KQDTAISIALSCKLL 358 (658)
Q Consensus 307 gTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr-~~~~a~~ia~~~gl~ 358 (658)
|......+-+-++.|++.+.++.|+++|+++.++|+. ....+..+....++.
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 3444444444568899999999999999999999987 888888888888763
No 149
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.33 E-value=0.015 Score=55.46 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=36.6
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++|++|+++|++++++|+-+...+..+...+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 46799999999999999999999999988888888888863
No 150
>PLN02940 riboflavin kinase
Probab=96.25 E-value=0.019 Score=60.67 Aligned_cols=40 Identities=13% Similarity=0.124 Sum_probs=33.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHH-HcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIAL-SCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~-~~gl 357 (658)
++.|++.+.++.|+++|++++|+|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 567999999999999999999999998887776554 4555
No 151
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=96.11 E-value=0.013 Score=55.07 Aligned_cols=58 Identities=16% Similarity=0.192 Sum_probs=46.1
Q ss_pred hccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcc-eeEEecCcc
Q 041225 460 ATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMAD-VGVGICGQE 517 (658)
Q Consensus 460 ~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A~-vgIam~~~~ 517 (658)
..-+...+++.+.|.+|..+++.|.+...+++..||| |.||-|.+...+ +|+++.+-+
T Consensus 147 siGGqiSiDvfp~GwDKty~Lr~l~~~~~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p~ 209 (220)
T PF03332_consen 147 SIGGQISIDVFPKGWDKTYCLRHLEDEGFDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSPE 209 (220)
T ss_dssp EEETTTEEEEEETT-SGGGGGGGTTTTT-SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSHH
T ss_pred ecCCceEEccccCCccHHHHHHHHHhcccceEEEEehhccCCCCCceeeecCCccEEEeCCHH
Confidence 3445678999999999999999999865689999999 899999998765 588885443
No 152
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.11 E-value=0.01 Score=49.59 Aligned_cols=60 Identities=23% Similarity=0.261 Sum_probs=43.1
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHH---HHHHHHcCccCCCccEE
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTA---ISIALSCKLLTPDMQQI 365 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a---~~ia~~~gl~~~~~~~i 365 (658)
.+|+||+|.. .+.+-|++.++|+.|+++|++++++|-.+..+. ..-...+|+....++++
T Consensus 2 l~D~dGvl~~----g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ 64 (101)
T PF13344_consen 2 LFDLDGVLYN----GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEII 64 (101)
T ss_dssp EEESTTTSEE----TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEE
T ss_pred EEeCccEeEe----CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEE
Confidence 4799999997 457889999999999999999999998775443 33346778765444443
No 153
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.07 E-value=0.012 Score=54.41 Aligned_cols=43 Identities=19% Similarity=0.236 Sum_probs=39.0
Q ss_pred ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 316 EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 316 ~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
..++.+++.+.+++|+++|++++++|+.+...+....+.+|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 3378899999999999999999999999999999999998875
No 154
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.07 E-value=0.019 Score=51.67 Aligned_cols=43 Identities=14% Similarity=0.247 Sum_probs=36.0
Q ss_pred EcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEe
Q 041225 470 RVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 470 ~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
.+-|.+|+..|+.+++. .+.+..+|||.-|+++=+.+++=+|=
T Consensus 142 s~fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 142 SQFGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred cccCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhhH
Confidence 55688999999999997 67899999999999987777765543
No 155
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.05 E-value=0.016 Score=54.36 Aligned_cols=39 Identities=21% Similarity=0.261 Sum_probs=33.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.++|+.|+++|++++++|+. ..+..+.+..|+.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 68899999999999999999999998 5566677777763
No 156
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.04 E-value=0.029 Score=52.42 Aligned_cols=40 Identities=33% Similarity=0.355 Sum_probs=33.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.+.++.|+++|++++++|+..... ..+..++|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 678999999999999999999999988777 5444446663
No 157
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=96.03 E-value=0.049 Score=59.06 Aligned_cols=71 Identities=13% Similarity=0.104 Sum_probs=50.1
Q ss_pred CcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhhhhhHHHHHH
Q 041225 472 APLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIG 551 (658)
Q Consensus 472 ~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~gr~~~~~~~ 551 (658)
.+..|...++.....+... .+.||+.||.+||+.|+.++++.... . --++...+.+.+++..||..++-.-
T Consensus 173 ~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~~~~------~--~~~~~~~~~~~~~fhdgrl~~~p~~ 243 (497)
T PLN02177 173 VGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYMVPRTK------C--EPLPRNKLLSPVIFHEGRLVQRPTP 243 (497)
T ss_pred ccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEEeCCCC------C--CcCCcccCCCceeeeCCcccCCCCH
Confidence 4567888887443322223 89999999999999999999993311 1 1156667777787778998877543
No 158
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.90 E-value=0.02 Score=53.71 Aligned_cols=38 Identities=18% Similarity=0.334 Sum_probs=30.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.|++.++|+.|+++|+++.++|+... +....+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 5779999999999999999999998643 3455666665
No 159
>PRK09449 dUMP phosphatase; Provisional
Probab=95.84 E-value=0.069 Score=51.89 Aligned_cols=40 Identities=20% Similarity=0.155 Sum_probs=34.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|+ +|++++++|+.....+.......|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 47799999999999 68999999998888777777777763
No 160
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.63 E-value=0.018 Score=58.18 Aligned_cols=61 Identities=18% Similarity=0.260 Sum_probs=45.2
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHH---HHHHcCccCCCccE
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAIS---IALSCKLLTPDMQQ 364 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~---ia~~~gl~~~~~~~ 364 (658)
.+++|+||||+.. +..-+++.++|++|+++|++++++||++..+... -.+.+|+....+++
T Consensus 4 ~~~~D~DGtl~~~----~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i 67 (279)
T TIGR01452 4 GFIFDCDGVLWLG----ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQL 67 (279)
T ss_pred EEEEeCCCceEcC----CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhE
Confidence 3568999999884 3456779999999999999999999987544333 34567775443333
No 161
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=95.57 E-value=0.043 Score=50.51 Aligned_cols=44 Identities=32% Similarity=0.371 Sum_probs=36.0
Q ss_pred HHHhhhccceeeeccc-ccc-----ccCCChHHHHHHHHhcCCeEEEEec
Q 041225 299 TAALIECDLTLLGATG-IED-----KLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~-~~d-----~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
.++|+|.|||+.-..+ .-+ .+.+++.+++..++++|.+++|+|-
T Consensus 6 k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 6 KALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred cEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEEC
Confidence 5679999999986543 111 3579999999999999999999996
No 162
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.55 E-value=0.26 Score=46.13 Aligned_cols=60 Identities=27% Similarity=0.261 Sum_probs=45.7
Q ss_pred cccHHHHHHHHHhc--CCCeEEEEcCCcCChhhhhhcc----eeEEecCccchhhhhhcccccccccc
Q 041225 473 PLQKAGIVDLIKSR--TDDMTLAIGDGANDVSMIQMAD----VGVGICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 473 ~~~K~~~v~~L~~~--~~~~v~aiGDg~NDi~Ml~~A~----vgIam~~~~~~~~k~~AD~vl~~~~~ 534 (658)
+..|+.+++.+++. .....+++|||..|+.||+.+. +.||..||+- +...||+.+.+-..
T Consensus 189 gg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvisp~~ 254 (315)
T COG4030 189 GGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVISPTA 254 (315)
T ss_pred CcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEeccch
Confidence 46789999999987 2233799999999999999873 5566666665 78888987655544
No 163
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.34 E-value=0.045 Score=53.13 Aligned_cols=41 Identities=22% Similarity=0.353 Sum_probs=36.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++.|++.+.+++|+++ ++++++|+.....+..+.+..|+..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~ 137 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFP 137 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHh
Confidence 5788999999999999 9999999999888888888888743
No 164
>PLN02811 hydrolase
Probab=95.29 E-value=0.049 Score=52.82 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=27.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTA 348 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a 348 (658)
++.|++.+.|+.|+++|++++++||-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5779999999999999999999999876543
No 165
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.19 E-value=0.083 Score=50.41 Aligned_cols=39 Identities=13% Similarity=0.167 Sum_probs=31.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+-|++.++++.|+++|++++++|+-.. .+......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCc
Confidence 5778999999999999999999998654 34555666665
No 166
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=95.18 E-value=0.085 Score=48.12 Aligned_cols=55 Identities=18% Similarity=0.227 Sum_probs=45.2
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCe--EEEEecC-------ChhHHHHHHHHcCc
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIK--VWVLTGD-------KQDTAISIALSCKL 357 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~--v~i~TGr-------~~~~a~~ia~~~gl 357 (658)
+.+|.|.||... =++++.++..+.+++|++.+.. ++|+|-. ....|..+.+.+|+
T Consensus 44 li~DkDNTL~~~--~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 44 LIFDKDNTLTPP--YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred EEEcCCCCCCCC--CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 346899999865 2678999999999999999874 9999886 36778888888886
No 167
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.11 E-value=0.064 Score=48.62 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=32.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC 355 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~ 355 (658)
...+++.+.++.|+++|++++++|+.....+....+..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 45588999999999999999999999988877766553
No 168
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=94.88 E-value=0.13 Score=49.54 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=31.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS 354 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~ 354 (658)
++.+++.++|++|+++|+++.++|..+......+...
T Consensus 95 ~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 95 HLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 6889999999999999999999999887766655444
No 169
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=94.73 E-value=0.063 Score=58.48 Aligned_cols=47 Identities=19% Similarity=0.318 Sum_probs=37.1
Q ss_pred HHHhhhccceeeeccc----ccc-----ccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 299 TAALIECDLTLLGATG----IED-----KLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~----~~d-----~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
++.++|.||||+.... ..+ -+-|++.++|++|+++|++++|+|.-+.
T Consensus 169 Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 169 KIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 5678999999996432 011 1469999999999999999999998544
No 170
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=94.54 E-value=0.054 Score=53.13 Aligned_cols=53 Identities=26% Similarity=0.218 Sum_probs=43.5
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHH-cCcc
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALS-CKLL 358 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~-~gl~ 358 (658)
.+|+||||+.. +.+-+++.++|+.++++|++++++| ||+.........+ .|+-
T Consensus 2 lfD~DGvL~~~----~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 2 LFDIDGVLWLG----HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred EEeCcCccCcC----CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 47999999985 3455699999999999999999998 8888877666566 6763
No 171
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=93.30 E-value=0.33 Score=58.22 Aligned_cols=41 Identities=20% Similarity=0.093 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+-|++.+.++.|+++|++++|+|+.....+..+.+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36789999999999999999999999999888888888873
No 172
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=92.99 E-value=0.3 Score=47.35 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=38.0
Q ss_pred ccCCChHHHHHHH--HhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 318 KLQDGVPEAIEAL--RQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 318 ~l~~~~~~aI~~l--~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
++.|+..++++.+ .+.|+.+.|+|--+..-+..+.+.-|+...
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~ 115 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDC 115 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccc
Confidence 7889999999999 568999999999999999999999888543
No 173
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=92.81 E-value=0.24 Score=47.53 Aligned_cols=28 Identities=32% Similarity=0.424 Sum_probs=25.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
++.|++.+.++.|+++|++++++|....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5778999999999999999999998654
No 174
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=92.56 E-value=1.1 Score=41.98 Aligned_cols=40 Identities=10% Similarity=0.149 Sum_probs=35.4
Q ss_pred ccCCChHHHHHHHHhcCC-eEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGI-KVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI-~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.|+..++|+.+++.|. .++|+|--+.--+..+.+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 789999999999999997 8899998888888888877776
No 175
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=92.29 E-value=0.43 Score=46.41 Aligned_cols=29 Identities=28% Similarity=0.423 Sum_probs=26.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChh
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQD 346 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~ 346 (658)
+.-|++.+.++.++++|++|+++|||+..
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 55577999999999999999999999875
No 176
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=92.04 E-value=0.14 Score=46.94 Aligned_cols=39 Identities=13% Similarity=0.036 Sum_probs=35.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
..||++.+.++.|.+. ..+++.|.-....|..+...++.
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 3789999999999987 99999999999999999888775
No 177
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=91.61 E-value=0.32 Score=44.61 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=43.0
Q ss_pred ccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhc-ceeEEe
Q 041225 461 TSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMA-DVGVGI 513 (658)
Q Consensus 461 ~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A-~vgIam 513 (658)
..+...+++-+++=+|-.-++.+.+.+-+++-.||| |.||-+.+..- -+|.++
T Consensus 179 IGGQISfDvFP~GWDKtyCLqhle~dgf~~IhFFGDkT~~GGNDyEIf~dprtiGhsV 236 (252)
T KOG3189|consen 179 IGGQISFDVFPKGWDKTYCLQHLEKDGFDTIHFFGDKTMPGGNDYEIFADPRTIGHSV 236 (252)
T ss_pred ECCeEEEeecCCCcchhHHHHHhhhcCCceEEEeccccCCCCCcceeeeCCccccccc
Confidence 344567889999999999999999887789999999 88999988543 255555
No 178
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=91.48 E-value=0.23 Score=49.08 Aligned_cols=49 Identities=27% Similarity=0.335 Sum_probs=40.8
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHH
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia 352 (658)
...+|+|||+.. .+..-|++.++|++|+++|++++++|-.+..+...++
T Consensus 10 ~~l~DlDGvl~~----G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~ 58 (269)
T COG0647 10 GFLFDLDGVLYR----GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVA 58 (269)
T ss_pred EEEEcCcCceEe----CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Confidence 457899999996 4578899999999999999999999987766655333
No 179
>PHA02597 30.2 hypothetical protein; Provisional
Probab=91.30 E-value=1.2 Score=42.17 Aligned_cols=38 Identities=18% Similarity=0.202 Sum_probs=28.0
Q ss_pred HHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhc--ceeE-Ee
Q 041225 476 KAGIVDLIKSR-TDDMTLAIGDGANDVSMIQMA--DVGV-GI 513 (658)
Q Consensus 476 K~~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A--~vgI-am 513 (658)
|-..+..+.+. +++.+++|||+.+|+.+=+.| |+-+ ++
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 44455544443 456799999999999999999 9875 44
No 180
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=90.52 E-value=0.73 Score=43.76 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=26.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTA 348 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a 348 (658)
++.|++.++++.|+++|+++.++|.-+....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~ 114 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 114 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhH
Confidence 4678999999999999999999999875543
No 181
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=90.19 E-value=0.42 Score=46.26 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=31.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++-+++.++|+.| ++++.++|+.+...+....+..|+.
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 5678999999988 5999999999887777777777763
No 182
>PTZ00445 p36-lilke protein; Provisional
Probab=89.89 E-value=0.64 Score=43.71 Aligned_cols=49 Identities=20% Similarity=0.250 Sum_probs=36.4
Q ss_pred HHHhhhccceeee--ccccccc----------cCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 299 TAALIECDLTLLG--ATGIEDK----------LQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 299 ~~~~~d~DgTllg--~~~~~d~----------l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
.++.+|.|.|+++ +-|-.++ ++|+.+.-+++|+++||+++++|=-....
T Consensus 44 k~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 44 KVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred eEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 3455788899888 1122333 68899999999999999999999655433
No 183
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=89.61 E-value=2 Score=42.35 Aligned_cols=30 Identities=20% Similarity=0.254 Sum_probs=25.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
+.-|.+.+..+.+++.|++|+++|||....
T Consensus 145 pAlp~al~ly~~l~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 145 PALPETLKNYNKLVSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 445688889999999999999999998643
No 184
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=88.09 E-value=1.4 Score=41.18 Aligned_cols=35 Identities=20% Similarity=0.118 Sum_probs=30.0
Q ss_pred hHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 323 VPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 323 ~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
..+.+..|++. +++.++||.+...+....+..|+.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 46899999865 899999999999999888888874
No 185
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=87.88 E-value=0.43 Score=43.47 Aligned_cols=42 Identities=36% Similarity=0.582 Sum_probs=31.5
Q ss_pred Hhhhccceeeecccc-------cc-c-cCCChHHHHHHHHhcCCeEEEEec
Q 041225 301 ALIECDLTLLGATGI-------ED-K-LQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 301 ~~~d~DgTllg~~~~-------~d-~-l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
.++|+||||+-.-.- +| + +.+++.++|++|.+.|.+++|+|-
T Consensus 3 a~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 3 AFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp EEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeC
Confidence 368999999987432 22 2 356899999999999999999995
No 186
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=87.78 E-value=0.94 Score=43.87 Aligned_cols=43 Identities=28% Similarity=0.291 Sum_probs=39.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
++.+++.+.++.|+++|+.++++|+.+...+..+....|+...
T Consensus 86 ~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~ 128 (221)
T COG0637 86 KPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY 128 (221)
T ss_pred CCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh
Confidence 6889999999999999999999999999999999999998543
No 187
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=85.77 E-value=0.74 Score=42.96 Aligned_cols=39 Identities=15% Similarity=0.308 Sum_probs=26.7
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCc
Q 041225 580 TSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPK 620 (658)
Q Consensus 580 ~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~ 620 (658)
+.|+++.|++|+|++.+.+|+++++... .+++.+.+.|.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~--~~~~im~r~Pr 39 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEP--PDPDIMKRPPR 39 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS---
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCc--chhhhhhcccc
Confidence 4688999999999999999999997533 34455555554
No 188
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=85.48 E-value=2.9 Score=38.94 Aligned_cols=38 Identities=11% Similarity=-0.001 Sum_probs=31.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+++++|+ .+++++|+.+...+..+.+..|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 46688899999987 478999999988888888888874
No 189
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=83.57 E-value=1.3 Score=45.56 Aligned_cols=56 Identities=20% Similarity=0.177 Sum_probs=42.7
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhc----CCeEEEEecC---ChhH-HHHHHHHcCccCC
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQA----GIKVWVLTGD---KQDT-AISIALSCKLLTP 360 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~----GI~v~i~TGr---~~~~-a~~ia~~~gl~~~ 360 (658)
+.+|+||||... +++-+++.++++.|+++ |+++.++|-. +... +..+.+.+|+-..
T Consensus 3 ~ifD~DGvL~~g----~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~ 66 (321)
T TIGR01456 3 FAFDIDGVLFRG----KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVS 66 (321)
T ss_pred EEEeCcCceECC----ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCC
Confidence 358999999974 46689999999999999 9999999844 3444 4445577887433
No 190
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=81.34 E-value=14 Score=38.09 Aligned_cols=49 Identities=24% Similarity=0.232 Sum_probs=37.2
Q ss_pred HHhhhccceeeecccccccc--CCChHHHHHHHHhcCCeEEEEecCChhHHHHH
Q 041225 300 AALIECDLTLLGATGIEDKL--QDGVPEAIEALRQAGIKVWVLTGDKQDTAISI 351 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l--~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~i 351 (658)
.+-+|-|+||...-+ .+ ...+..-|-+|.++|++|.|+|.=.+..+...
T Consensus 149 LvTFDgDvTLY~DG~---sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY 199 (408)
T PF06437_consen 149 LVTFDGDVTLYEDGA---SLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKY 199 (408)
T ss_pred EEEEcCCcccccCCC---CCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHH
Confidence 345889999997633 44 45667778888999999999999887766444
No 191
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=81.26 E-value=5.2 Score=36.21 Aligned_cols=31 Identities=26% Similarity=0.565 Sum_probs=23.5
Q ss_pred HHHHhcCCCeEEEEcCCcCChhhhhhcce-eEEe
Q 041225 481 DLIKSRTDDMTLAIGDGANDVSMIQMADV-GVGI 513 (658)
Q Consensus 481 ~~L~~~~~~~v~aiGDg~NDi~Ml~~A~v-gIam 513 (658)
.+++++ ..-+.-||+.||+-+-+.||+ ||-+
T Consensus 179 ~~i~~~--~~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 179 QWIQDK--NIRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred HHHHhc--CceEEecCCchhhhHHHhcCccceeE
Confidence 344544 567899999999999999986 5643
No 192
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=77.68 E-value=9.6 Score=43.46 Aligned_cols=49 Identities=22% Similarity=0.279 Sum_probs=40.9
Q ss_pred hhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc
Q 041225 459 LATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMA 507 (658)
Q Consensus 459 i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A 507 (658)
.+..+...|++++.+++|+.++..+... ..+.++++||---|=.|+...
T Consensus 641 ~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~~~~df~~c~g~d~tDed~~~~~ 692 (732)
T KOG1050|consen 641 EVVRGKHIVEVRPQGVSKGLAAERILSEMVKEPDFVLCIGDDRTDEDMFEFI 692 (732)
T ss_pred EEEecCceEEEcccccchHHHHHHHHHhcCCCcceEEEecCCCChHHHHHHH
Confidence 3455678899999999999999998877 357899999988899898754
No 193
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=75.36 E-value=5.4 Score=30.86 Aligned_cols=47 Identities=13% Similarity=0.313 Sum_probs=33.4
Q ss_pred CCCeEEEEcCC-cCChhhhhhccee-EEe-cCccch-hh---hhhccccccccc
Q 041225 487 TDDMTLAIGDG-ANDVSMIQMADVG-VGI-CGQEGR-QA---VMASDFAMGQFR 533 (658)
Q Consensus 487 ~~~~v~aiGDg-~NDi~Ml~~A~vg-Iam-~~~~~~-~~---k~~AD~vl~~~~ 533 (658)
++.++++|||+ ..|+.+=+.+|+. |.+ .|.... +. ...+|+|+.+..
T Consensus 20 ~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~ 73 (75)
T PF13242_consen 20 DPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLK 73 (75)
T ss_dssp GGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGG
T ss_pred CHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHH
Confidence 46789999999 9999999999975 444 333222 12 257888877654
No 194
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=74.76 E-value=20 Score=32.85 Aligned_cols=51 Identities=25% Similarity=0.353 Sum_probs=33.6
Q ss_pred eeeeccccccccCCChHHHHHHHHhcCCeEEEEe-cCChhHHHHHHHHcCcc
Q 041225 308 TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT-GDKQDTAISIALSCKLL 358 (658)
Q Consensus 308 Tllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T-Gr~~~~a~~ia~~~gl~ 358 (658)
+++...|-.=.+-|++..+|+.|+++|+++.+|| -+.+..|..+.+.+++.
T Consensus 35 ~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 35 VVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp -EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 4454444333577999999999999999999999 46788899998888875
No 195
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=74.34 E-value=22 Score=34.69 Aligned_cols=47 Identities=19% Similarity=0.376 Sum_probs=34.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccE
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQ 364 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~ 364 (658)
.+|+++.+.++.|++.+|++.|.|+-=..-+..+.++.|...++-.+
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~V 136 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKV 136 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEE
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEE
Confidence 69999999999999999999999998777777787777776665443
No 196
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=74.04 E-value=3.3 Score=37.60 Aligned_cols=55 Identities=22% Similarity=0.274 Sum_probs=41.6
Q ss_pred Hhhhccceeeecccccc----------------ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcC
Q 041225 301 ALIECDLTLLGATGIED----------------KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK 356 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d----------------~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~g 356 (658)
..+|+||||+....-.. .+||+..+.++.+ .....++|.|......|..+...+.
T Consensus 3 LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l-~~~~ev~i~T~~~~~ya~~v~~~ld 73 (159)
T PF03031_consen 3 LVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEEL-SKHYEVVIWTSASEEYAEPVLDALD 73 (159)
T ss_dssp EEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHH-HHHCEEEEE-SS-HHHHHHHHHHHT
T ss_pred EEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHH-HHhceEEEEEeehhhhhhHHHHhhh
Confidence 35899999998765321 2799999999999 4559999999999999999998876
No 197
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=71.16 E-value=11 Score=36.98 Aligned_cols=28 Identities=7% Similarity=0.219 Sum_probs=23.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChh
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQD 346 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~ 346 (658)
.+.|++.++++.|++. +++.++|..+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 5778999999999875 889999886543
No 198
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=70.95 E-value=8.2 Score=38.30 Aligned_cols=50 Identities=16% Similarity=0.221 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCc-CChhhhhhcceeE-Ee-cCccc-h---hhhhhcccccccccchH
Q 041225 487 TDDMTLAIGDGA-NDVSMIQMADVGV-GI-CGQEG-R---QAVMASDFAMGQFRFLK 536 (658)
Q Consensus 487 ~~~~v~aiGDg~-NDi~Ml~~A~vgI-am-~~~~~-~---~~k~~AD~vl~~~~~l~ 536 (658)
+++++++|||+. +|+.+=+.+|+-. .+ .|... . .....+|+++.++.-+.
T Consensus 195 ~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~ 251 (257)
T TIGR01458 195 EPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAV 251 (257)
T ss_pred ChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHH
Confidence 468899999996 9999999999754 44 22211 1 11234677776654443
No 199
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=70.49 E-value=7.1 Score=38.50 Aligned_cols=61 Identities=15% Similarity=0.216 Sum_probs=50.4
Q ss_pred HHHhhhccceeeecccccccc-CCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 299 TAALIECDLTLLGATGIEDKL-QDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l-~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
..+++|+|-||+...+ +-++ .|.+.+++.+|++.|-.+++=|--+.+-+...++++++...
T Consensus 123 hVIVfDlD~TLItd~~-~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~ 184 (297)
T PF05152_consen 123 HVIVFDLDSTLITDEG-DVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGY 184 (297)
T ss_pred cEEEEECCCcccccCC-ccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccc
Confidence 4678999999998855 2233 47889999999999988888888788899999999998644
No 200
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=69.97 E-value=22 Score=35.09 Aligned_cols=41 Identities=24% Similarity=0.316 Sum_probs=32.7
Q ss_pred cccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHH---HHcCc
Q 041225 317 DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA---LSCKL 357 (658)
Q Consensus 317 d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia---~~~gl 357 (658)
..+.+++.+.|+.|+++|+.+.-+|.|.+......+ +++|+
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi 123 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGI 123 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCC
Confidence 356778999999999999999999999976665544 34455
No 201
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=65.48 E-value=33 Score=32.89 Aligned_cols=41 Identities=20% Similarity=0.096 Sum_probs=35.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
+..+++.+++++++.+ .+++++|--....+.....++|+..
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~ 139 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD 139 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh
Confidence 6788999999999999 9999999877777888888888644
No 202
>PF02261 Asp_decarbox: Aspartate decarboxylase; InterPro: IPR003190 Decarboxylation of aspartate is the major route of alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase. The enzyme is translated as an inactive proenzyme of two chains, A and B. This family contains both chains of aspartate decarboxylase.; GO: 0004068 aspartate 1-decarboxylase activity, 0006523 alanine biosynthetic process; PDB: 1PYU_C 1AW8_A 1PYQ_B 3TM7_C 1PT1_A 1PQH_A 1PPY_B 1PT0_B 1PQF_A 1PQE_A ....
Probab=63.33 E-value=6.3 Score=33.07 Aligned_cols=85 Identities=19% Similarity=0.289 Sum_probs=53.2
Q ss_pred cceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCch
Q 041225 149 EAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADS 228 (658)
Q Consensus 149 ~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e 228 (658)
..+.|.|+=-+|..|++.|.-.-+. .+.+..-++.-+..+.++..+.|.-.+..-||.-
T Consensus 18 a~L~Y~GSitID~~Ll~aagi~p~E---------------------~V~V~Nv~nG~Rf~TYvI~g~~GSg~I~lNGaAA 76 (116)
T PF02261_consen 18 ADLNYEGSITIDEDLLDAAGILPYE---------------------QVQVVNVNNGERFETYVIPGERGSGVICLNGAAA 76 (116)
T ss_dssp EETTSTSCEEEEHHHHHHCT--TTB---------------------EEEEEETTT--EEEEEEEEESTTTT-EEEEGGGG
T ss_pred cccccceeeEECHHHHHHcCCCcCC---------------------EEEEEECCCCcEEEEEEEEccCCCcEEEECCHHH
Confidence 4567888777899999987544322 2333444555555566667676666667777764
Q ss_pred HhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHH
Q 041225 229 SMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQ 279 (658)
Q Consensus 229 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~ 279 (658)
. +...|-++++.||..++++|...|.
T Consensus 77 r-------------------------l~~~GD~vII~sy~~~~~~e~~~~~ 102 (116)
T PF02261_consen 77 R-------------------------LVQVGDRVIIMSYAQVDEEEAKNHK 102 (116)
T ss_dssp G-------------------------CS-TT-EEEEEEEEEEEHHHHHH--
T ss_pred h-------------------------ccCCCCEEEEEEcccCCHHHHhhCC
Confidence 3 3455889999999999999887654
No 203
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=61.41 E-value=17 Score=34.08 Aligned_cols=55 Identities=24% Similarity=0.253 Sum_probs=41.0
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHH---HHHcCccCC
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISI---ALSCKLLTP 360 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~i---a~~~gl~~~ 360 (658)
.+|+-|||-. ++..-|++.+|+++|++++.+|-.+|--+.++-..+ ..++|+.-.
T Consensus 11 LlDlSGtLh~----e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~ 68 (262)
T KOG3040|consen 11 LLDLSGTLHI----EDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVS 68 (262)
T ss_pred EEeccceEec----ccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCcc
Confidence 4666777655 566889999999999999999999987766555544 455666433
No 204
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=60.27 E-value=10 Score=34.37 Aligned_cols=116 Identities=18% Similarity=0.185 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHhhcCCeEEEEEEec-CCHHHHHHHHHHHHHHhhhhhhHHH-HHHHHHHhhhccceeeeccccccccCC
Q 041225 244 IRHITQSHLSEYSSQGLRTLVVASRD-LADEELKQWQHRYEDASTSLVDRAS-KLRQTAALIECDLTLLGATGIEDKLQD 321 (658)
Q Consensus 244 ~~~~~~~~~~~~~~~G~r~l~~a~k~-l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~DgTllg~~~~~d~l~~ 321 (658)
.+..+.+..+++...|.+....+++. .+...+..|++..........-... --...+..++.|+.++|.+.++..+.+
T Consensus 13 ~k~a~le~~~e~~~~~~~~~~~~~~~~~~~~~fed~L~~~~~~~~~~~~~~g~V~~~~y~~v~~d~~ivG~i~lRh~Ln~ 92 (174)
T COG3981 13 DKDAFLEMKKEFLTDGSTEAGAAWKADYEQEDFEDWLEDLTRQEPGNNLPEGWVPASTYWAVDEDGQIVGFINLRHQLND 92 (174)
T ss_pred hHHHHHHHHHhhhhcCCcccCceeecccccccHHHHHHHHhccCCCcCCCCCceeceeEEEEecCCcEEEEEEeeeecch
Confidence 45567777788888888877766554 3457788888764322111110000 001123446669999999999887765
Q ss_pred Ch-------------------------HHHHHHHHhcCCeEEEEecCC--hhHHHHHHHHcCccC
Q 041225 322 GV-------------------------PEAIEALRQAGIKVWVLTGDK--QDTAISIALSCKLLT 359 (658)
Q Consensus 322 ~~-------------------------~~aI~~l~~~GI~v~i~TGr~--~~~a~~ia~~~gl~~ 359 (658)
.. +.+++++++.||+-+++|-|. ..+...|-.+.|+..
T Consensus 93 ~ll~~gGHIGY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~~NGGile 157 (174)
T COG3981 93 FLLEEGGHIGYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIEANGGILE 157 (174)
T ss_pred HHHhcCCcccceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHHhcCCEEe
Confidence 43 347888999999988888765 455566666777643
No 205
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=55.33 E-value=33 Score=29.98 Aligned_cols=53 Identities=26% Similarity=0.228 Sum_probs=42.8
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec--CChhHHHHHHHHcCc
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG--DKQDTAISIALSCKL 357 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG--r~~~~a~~ia~~~gl 357 (658)
.+|+||.+|.... .=.-+..+.|+.+.+.|..++++|- ..+.++..++..++-
T Consensus 47 ildL~G~~l~l~S---~R~~~~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia~~f~A 101 (138)
T PF04312_consen 47 ILDLDGELLDLKS---SRNMSRSEVIEWISEYGKPVIVATDVSPPPETVKKIARSFNA 101 (138)
T ss_pred EEecCCcEEEEEe---ecCCCHHHHHHHHHHcCCEEEEEecCCCCcHHHHHHHHHhCC
Confidence 3789999999855 3334566899999999999999996 456899999998874
No 206
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=55.27 E-value=22 Score=30.38 Aligned_cols=84 Identities=18% Similarity=0.234 Sum_probs=55.5
Q ss_pred cceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCch
Q 041225 149 EAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADS 228 (658)
Q Consensus 149 ~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e 228 (658)
..+.|.|+=-+|..|++.|.-.- ++.+.+..-++..+..+.++.-+.|.-.+.+-||.-
T Consensus 18 a~L~Y~GSitID~~Ll~aagi~p---------------------~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~lNGAAA 76 (126)
T PRK05449 18 ADLNYEGSITIDEDLLDAAGILE---------------------NEKVQIVNVNNGARFETYVIAGERGSGVICLNGAAA 76 (126)
T ss_pred cccccceeEEECHHHHHhcCCCC---------------------CCEEEEEECCCCcEEEEEEEEcCCCCCEEEeCCHHH
Confidence 46788887789999999875332 222333344444444455556555555566666643
Q ss_pred HhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHH
Q 041225 229 SMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQW 278 (658)
Q Consensus 229 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~ 278 (658)
.+..-|-|+++.||-.++++|...|
T Consensus 77 -------------------------r~~~~GD~vII~ay~~~~~~e~~~~ 101 (126)
T PRK05449 77 -------------------------RLVQVGDLVIIAAYAQMDEEEAKTH 101 (126)
T ss_pred -------------------------hcCCCCCEEEEEECccCCHHHHhcC
Confidence 3456699999999999999986544
No 207
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=54.68 E-value=21 Score=29.81 Aligned_cols=84 Identities=18% Similarity=0.236 Sum_probs=54.8
Q ss_pred cceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCch
Q 041225 149 EAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADS 228 (658)
Q Consensus 149 ~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e 228 (658)
..+.|.|+=-+|..|++.|.-.- ++.+.+..-++.-+..+.++.-+.|.-.+.+-||.-
T Consensus 17 a~L~YeGSitID~~Ll~aagi~~---------------------~E~V~I~Nv~NG~Rf~TYvI~g~~gSg~I~lNGAAA 75 (111)
T cd06919 17 ADLNYEGSITIDEDLLEAAGILP---------------------YEKVLVVNVNNGARFETYVIPGERGSGVICLNGAAA 75 (111)
T ss_pred cccccceeEEECHHHHHhcCCCC---------------------CCEEEEEECCCCcEEEEEEEEcCCCCCEEEeCCHHH
Confidence 46788887789999999875332 222333344444444455556555555566666643
Q ss_pred HhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHH
Q 041225 229 SMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQW 278 (658)
Q Consensus 229 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~ 278 (658)
.+..-|-|+++.+|-.+++++...|
T Consensus 76 -------------------------r~~~~GD~vII~sy~~~~~~e~~~~ 100 (111)
T cd06919 76 -------------------------RLGQPGDRVIIMAYALMDEEEAEGH 100 (111)
T ss_pred -------------------------hcCCCCCEEEEEECccCCHHHHhcC
Confidence 3456699999999999999876543
No 208
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=53.35 E-value=23 Score=30.18 Aligned_cols=84 Identities=18% Similarity=0.256 Sum_probs=54.8
Q ss_pred cceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCch
Q 041225 149 EAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADS 228 (658)
Q Consensus 149 ~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e 228 (658)
..+.|.|+=-+|..|++.|.-+-+ +.+.+..-++.-+.-+.++.-+.|.-.+.+-||.-
T Consensus 18 a~L~Y~GSItID~~Lm~aagi~p~---------------------E~V~V~Nv~NG~Rf~TYvI~G~~GSg~I~lNGAAA 76 (126)
T TIGR00223 18 ANLNYEGSITIDEDLLDAAGILEN---------------------EKVDIVNVNNGKRFSTYAIAGKRGSRIICVNGAAA 76 (126)
T ss_pred cccccceeEEECHHHHHhcCCCCC---------------------CEEEEEECCCCcEEEEEEEEcCCCCCEEEeCCHHH
Confidence 467888877899999998754322 22233334444444455555555555555666543
Q ss_pred HhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHH
Q 041225 229 SMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQW 278 (658)
Q Consensus 229 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~ 278 (658)
.+.+.|-++++.||-.++++|...|
T Consensus 77 -------------------------rl~~~GD~VII~sy~~~~~~e~~~~ 101 (126)
T TIGR00223 77 -------------------------RCVSVGDIVIIASYVTMPDEEARTH 101 (126)
T ss_pred -------------------------hcCCCCCEEEEEECCcCCHHHHhcC
Confidence 4466699999999999999886544
No 209
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=52.13 E-value=52 Score=28.24 Aligned_cols=81 Identities=21% Similarity=0.270 Sum_probs=53.8
Q ss_pred HHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHh
Q 041225 253 SEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQ 332 (658)
Q Consensus 253 ~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~ 332 (658)
..+...|++|+.++.. .+.+++.+ ...+.+-.+++..+......+..++.+++|++
T Consensus 21 ~~l~~~G~~vi~lG~~-vp~e~~~~-----------------------~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~ 76 (122)
T cd02071 21 RALRDAGFEVIYTGLR-QTPEEIVE-----------------------AAIQEDVDVIGLSSLSGGHMTLFPEVIELLRE 76 (122)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHH-----------------------HHHHcCCCEEEEcccchhhHHHHHHHHHHHHh
Confidence 3567889999988866 44444321 12234445555555455666778888999999
Q ss_pred cCC--eEEEEecCChhHHHHHHHHcCc
Q 041225 333 AGI--KVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 333 ~GI--~v~i~TGr~~~~a~~ia~~~gl 357 (658)
+|. ..+++-|+.+..-..-..+.|+
T Consensus 77 ~~~~~i~i~~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 77 LGAGDILVVGGGIIPPEDYELLKEMGV 103 (122)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHCCC
Confidence 976 3467777777665666778886
No 210
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=52.10 E-value=15 Score=33.61 Aligned_cols=33 Identities=15% Similarity=0.060 Sum_probs=25.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.|++.++++ +++++|.-+...+....+..|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l 122 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGL 122 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCC
Confidence 46788888887 3678888888777777777776
No 211
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=51.69 E-value=7.1 Score=36.42 Aligned_cols=31 Identities=32% Similarity=0.511 Sum_probs=26.3
Q ss_pred cHHHHHHHH---Hh-c-CCCeEEEEcCCcCChhhhh
Q 041225 475 QKAGIVDLI---KS-R-TDDMTLAIGDGANDVSMIQ 505 (658)
Q Consensus 475 ~K~~~v~~L---~~-~-~~~~v~aiGDg~NDi~Ml~ 505 (658)
.|...++.+ .. . +...++++|||.||++|||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 599999999 22 2 5789999999999999996
No 212
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=47.12 E-value=21 Score=33.43 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=24.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChh
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQD 346 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~ 346 (658)
++-|++.+++++|.+.|..++++|+|+..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 67789999999999999999999999865
No 213
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=43.46 E-value=52 Score=34.02 Aligned_cols=38 Identities=18% Similarity=0.181 Sum_probs=34.8
Q ss_pred cCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc-C
Q 041225 319 LQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC-K 356 (658)
Q Consensus 319 l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~-g 356 (658)
..|++.+.+++|+++|+++.++|+-+...+..+...+ |
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 4689999999999999999999999999999988885 5
No 214
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=42.93 E-value=18 Score=32.63 Aligned_cols=34 Identities=29% Similarity=0.391 Sum_probs=30.1
Q ss_pred cCCChHHHHHHHHhcCCeEEEEecCChhHHHHHH
Q 041225 319 LQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352 (658)
Q Consensus 319 l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia 352 (658)
=++.+.++++..+++|++++.+||++-.....++
T Consensus 121 NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 121 NSKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred CCHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 4678899999999999999999999987777666
No 215
>COG2044 Predicted peroxiredoxins [General function prediction only]
Probab=42.46 E-value=23 Score=30.20 Aligned_cols=40 Identities=23% Similarity=0.330 Sum_probs=30.7
Q ss_pred hhccceeeeccccccccC----CChHHHHHHHHhcCCeEEEEec
Q 041225 303 IECDLTLLGATGIEDKLQ----DGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 303 ~d~DgTllg~~~~~d~l~----~~~~~aI~~l~~~GI~v~i~TG 342 (658)
+-+||..+-.-+-.++++ |...+-+++++++|+++++|+-
T Consensus 40 ~t~dG~~l~~K~~~ekik~~~~~~l~~~~~~a~e~GVk~yvCe~ 83 (120)
T COG2044 40 FTMDGVTLVKKKVAEKIKHPNFPPLEELIKQAIEAGVKIYVCEQ 83 (120)
T ss_pred EEeccceeeeecchhhhcCCCCCCHHHHHHHHHHcCCEEEEEcc
Confidence 345676665544456666 8899999999999999999964
No 216
>COG0853 PanD Aspartate 1-decarboxylase [Coenzyme metabolism]
Probab=40.66 E-value=58 Score=27.65 Aligned_cols=84 Identities=17% Similarity=0.221 Sum_probs=51.8
Q ss_pred cceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCch
Q 041225 149 EAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADS 228 (658)
Q Consensus 149 ~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e 228 (658)
..+.|.|+=-+|.-|++.+.-+-+... .+..-++.-+..+.++..+.|.-.+.+-||.
T Consensus 17 A~L~Y~GSitID~dlldaagile~EkV---------------------~I~N~nNGaRf~TYvI~g~rGSg~I~lNGAA- 74 (126)
T COG0853 17 ADLNYVGSITIDEDLLDAAGILENEKV---------------------DIVNVNNGARFSTYVIAGERGSGVICLNGAA- 74 (126)
T ss_pred cccceEEeEEECHHHHhhcCCCCCceE---------------------EEEECCCCcEEEEEEEEccCCCcEEEechHH-
Confidence 467888877788889888754332221 2222233323333344555555555555654
Q ss_pred HhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHH
Q 041225 229 SMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQW 278 (658)
Q Consensus 229 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~ 278 (658)
..+.+.|-+|++++|..++++|...+
T Consensus 75 ------------------------Arl~~~GD~VII~sy~~~~e~e~~~~ 100 (126)
T COG0853 75 ------------------------ARLVQVGDLVIIMSYAQMSEEEAKTH 100 (126)
T ss_pred ------------------------HhhCCCCCEEEEEEcccCCHHHHhcc
Confidence 34456689999999999999987543
No 217
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=40.38 E-value=45 Score=31.41 Aligned_cols=61 Identities=11% Similarity=0.095 Sum_probs=49.5
Q ss_pred HHHhhhccceeeeccc----cccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 299 TAALIECDLTLLGATG----IEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~----~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
+...+|+|+||+.... ..--.||...+-++.+-+ ...++|-|.-...-|..+...+++..+
T Consensus 22 klLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l~~~~~ 86 (195)
T TIGR02245 22 KLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTELGVLTN 86 (195)
T ss_pred cEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHhcccCC
Confidence 4567899999997521 112478999999999988 789999999999999999999887543
No 218
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=39.73 E-value=25 Score=34.37 Aligned_cols=24 Identities=17% Similarity=0.270 Sum_probs=20.2
Q ss_pred CCeEEEEcCC-cCChhhhhhcceeE
Q 041225 488 DDMTLAIGDG-ANDVSMIQMADVGV 511 (658)
Q Consensus 488 ~~~v~aiGDg-~NDi~Ml~~A~vgI 511 (658)
.+++++|||+ .+|+.+=+.+|+..
T Consensus 213 ~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 213 KNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred cccEEEECCCcHHHHHHHHHCCCeE
Confidence 4589999999 69999988888754
No 219
>PRK08508 biotin synthase; Provisional
Probab=39.63 E-value=4e+02 Score=26.64 Aligned_cols=61 Identities=20% Similarity=0.112 Sum_probs=41.6
Q ss_pred hHHHHHHHHhcCCe-EE------------EEecCChhH---HHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHH
Q 041225 323 VPEAIEALRQAGIK-VW------------VLTGDKQDT---AISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKA 384 (658)
Q Consensus 323 ~~~aI~~l~~~GI~-v~------------i~TGr~~~~---a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~ 384 (658)
+.+.+++|+++|+. +- ++||..+.. +...|++.|+-...+-++.. |-+.++..+.+..+++
T Consensus 101 ~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~sg~I~Gl-GEt~ed~~~~l~~lr~ 177 (279)
T PRK08508 101 SVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGLCSGGIFGL-GESWEDRISFLKSLAS 177 (279)
T ss_pred CHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCeecceeEEec-CCCHHHHHHHHHHHHc
Confidence 58899999999983 32 466766666 34457888875555545444 7777777777776654
No 220
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=38.50 E-value=50 Score=28.09 Aligned_cols=37 Identities=16% Similarity=0.230 Sum_probs=28.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK 356 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~g 356 (658)
--.+++.++++.++++|++++.+|++.. ....+.+.+
T Consensus 54 G~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~ 90 (119)
T cd05017 54 GNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHG 90 (119)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcC
Confidence 4567889999999999999999998763 444555444
No 221
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=38.24 E-value=1.2e+02 Score=25.60 Aligned_cols=81 Identities=20% Similarity=0.262 Sum_probs=51.6
Q ss_pred HHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHh
Q 041225 253 SEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQ 332 (658)
Q Consensus 253 ~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~ 332 (658)
.-+...|++|+.++ ..++.+++.+. + .+.+-.+++.......--+.+.+.++.+++
T Consensus 21 ~~l~~~G~~V~~lg-~~~~~~~l~~~---------------------~--~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~ 76 (119)
T cd02067 21 RALRDAGFEVIDLG-VDVPPEEIVEA---------------------A--KEEDADAIGLSGLLTTHMTLMKEVIEELKE 76 (119)
T ss_pred HHHHHCCCEEEECC-CCCCHHHHHHH---------------------H--HHcCCCEEEEeccccccHHHHHHHHHHHHH
Confidence 34567899998877 44666654321 1 223334555544434555777889999999
Q ss_pred cCC--eEEEEecCChhHHHHHHHHcCc
Q 041225 333 AGI--KVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 333 ~GI--~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+- ..+++-|.........+++.|.
T Consensus 77 ~~~~~~~i~vGG~~~~~~~~~~~~~G~ 103 (119)
T cd02067 77 AGLDDIPVLVGGAIVTRDFKFLKEIGV 103 (119)
T ss_pred cCCCCCeEEEECCCCChhHHHHHHcCC
Confidence 975 4478888776654556777775
No 222
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=35.67 E-value=68 Score=28.97 Aligned_cols=40 Identities=20% Similarity=0.067 Sum_probs=36.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.++|++.+.+++|.+. +.++++|.-....|..+.+.++..
T Consensus 58 ~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 58 KLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 6899999999999955 999999999999999999988764
No 223
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=35.46 E-value=1.3e+02 Score=28.90 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=30.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIAL 353 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~ 353 (658)
.+-|++.+.++.|+..|+.+.++|+.+..++..-..
T Consensus 92 ~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~ 127 (222)
T KOG2914|consen 92 ILMPGAEKLVNHLKNNGIPVALATSSTSASFELKIS 127 (222)
T ss_pred ccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHH
Confidence 567799999999999999999999997766654433
No 224
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=35.40 E-value=4.6e+02 Score=27.63 Aligned_cols=78 Identities=13% Similarity=0.264 Sum_probs=48.9
Q ss_pred HHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHH
Q 041225 251 HLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEAL 330 (658)
Q Consensus 251 ~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l 330 (658)
....+..+|+++..+|-.......+.+....-.. ..--+.|. +.+-.+-.-+.+.++++
T Consensus 121 lA~y~kkkG~K~~LvcaDTFRagAfDQLkqnA~k--------------------~~iP~ygs-yte~dpv~ia~egv~~f 179 (483)
T KOG0780|consen 121 LAYYYKKKGYKVALVCADTFRAGAFDQLKQNATK--------------------ARVPFYGS-YTEADPVKIASEGVDRF 179 (483)
T ss_pred HHHHHHhcCCceeEEeecccccchHHHHHHHhHh--------------------hCCeeEec-ccccchHHHHHHHHHHH
Confidence 3456778999999999877665544332221111 11234443 12333444567899999
Q ss_pred HhcCCeEEEE--ecCChhHHH
Q 041225 331 RQAGIKVWVL--TGDKQDTAI 349 (658)
Q Consensus 331 ~~~GI~v~i~--TGr~~~~a~ 349 (658)
++.+..++|+ |||+...+.
T Consensus 180 Kke~fdvIIvDTSGRh~qe~s 200 (483)
T KOG0780|consen 180 KKENFDVIIVDTSGRHKQEAS 200 (483)
T ss_pred HhcCCcEEEEeCCCchhhhHH
Confidence 9999988887 899876553
No 225
>COG4996 Predicted phosphatase [General function prediction only]
Probab=33.54 E-value=96 Score=26.86 Aligned_cols=56 Identities=23% Similarity=0.159 Sum_probs=47.0
Q ss_pred ceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCc
Q 041225 307 LTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDM 362 (658)
Q Consensus 307 gTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~ 362 (658)
.|+.++-|.+=.+.+.++++++.+++.|..+..+|=.-...|....+.+++...-.
T Consensus 30 n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFh 85 (164)
T COG4996 30 NTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFH 85 (164)
T ss_pred cceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEE
Confidence 35555555556788999999999999999999999999999999999999866543
No 226
>PRK10053 hypothetical protein; Provisional
Probab=33.07 E-value=25 Score=30.51 Aligned_cols=27 Identities=26% Similarity=0.455 Sum_probs=23.0
Q ss_pred eeeccCCcccccccceEEEeccCcccc
Q 041225 27 FQCRTLSINEDLGQIRYIFSDKTGTLT 53 (658)
Q Consensus 27 i~vr~~~~~e~Lg~v~~i~~DKTGTLT 53 (658)
-++=...++..||.=.|+|.|+||+++
T Consensus 63 ~V~L~G~Iv~~lg~d~Y~F~D~tG~I~ 89 (130)
T PRK10053 63 TVSLRGNLIDHKGDDRYVFRDKSGEIN 89 (130)
T ss_pred eEEEEEEEEEEeCCceEEEECCCCcEE
Confidence 455567889999999999999999876
No 227
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=31.09 E-value=47 Score=28.41 Aligned_cols=34 Identities=15% Similarity=0.056 Sum_probs=27.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISI 351 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~i 351 (658)
.-.+++.++++.++++|.+++.+|+.+.......
T Consensus 57 G~t~e~~~~~~~a~~~g~~vi~iT~~~~s~la~~ 90 (126)
T cd05008 57 GETADTLAALRLAKEKGAKTVAITNVVGSTLARE 90 (126)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEECCCCChHHHh
Confidence 4556789999999999999999999865544433
No 228
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=30.37 E-value=6.2e+02 Score=26.06 Aligned_cols=72 Identities=21% Similarity=0.302 Sum_probs=45.2
Q ss_pred HHHHHHHhhcCCeEEEEEEecCC---HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHH
Q 041225 249 QSHLSEYSSQGLRTLVVASRDLA---DEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPE 325 (658)
Q Consensus 249 ~~~~~~~~~~G~r~l~~a~k~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~ 325 (658)
-+....|..+|++|+..|--.+. -+|+..|-++ .+..++..-. ...+..=+-.
T Consensus 157 aKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er-----------------------~gv~vI~~~~-G~DpAaVafD 212 (340)
T COG0552 157 AKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGER-----------------------LGVPVISGKE-GADPAAVAFD 212 (340)
T ss_pred HHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHH-----------------------hCCeEEccCC-CCCcHHHHHH
Confidence 33445677899999999987664 3455555443 2233333210 1123335678
Q ss_pred HHHHHHhcCCeEEEE--ecCC
Q 041225 326 AIEALRQAGIKVWVL--TGDK 344 (658)
Q Consensus 326 aI~~l~~~GI~v~i~--TGr~ 344 (658)
||+..+.+|+.++++ .||-
T Consensus 213 Ai~~Akar~~DvvliDTAGRL 233 (340)
T COG0552 213 AIQAAKARGIDVVLIDTAGRL 233 (340)
T ss_pred HHHHHHHcCCCEEEEeCcccc
Confidence 999999999998887 4554
No 229
>COG1433 Uncharacterized conserved protein [Function unknown]
Probab=29.91 E-value=1.7e+02 Score=25.14 Aligned_cols=47 Identities=36% Similarity=0.516 Sum_probs=35.9
Q ss_pred hhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 303 IECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 303 ~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
-..|..+++-+| ..+++.|+++||++..+-|...+.++.......+.
T Consensus 64 ~gvdvvi~~~iG---------~~a~~~l~~~GIkv~~~~~~~V~e~i~~~~~g~l~ 110 (121)
T COG1433 64 EGVDVVIASNIG---------PNAYNALKAAGIKVYVAPGGTVEEAIKAFLEGELE 110 (121)
T ss_pred cCCCEEEECccC---------HHHHHHHHHcCcEEEecCCCCHHHHHHHHhcCCcc
Confidence 446667776555 56888899999999999998888888777666653
No 230
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=29.49 E-value=4.1e+02 Score=25.96 Aligned_cols=30 Identities=20% Similarity=0.348 Sum_probs=27.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
+.-|++.+-++..-+.|..|..+|-|..+.
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~ 151 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQEN 151 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhc
Confidence 566899999999999999999999998766
No 231
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=29.08 E-value=53 Score=28.01 Aligned_cols=33 Identities=18% Similarity=0.138 Sum_probs=27.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAIS 350 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ 350 (658)
--.+++.++++.++++|.+++.+|+........
T Consensus 58 G~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~ 90 (120)
T cd05710 58 GNTKETVAAAKFAKEKGATVIGLTDDEDSPLAK 90 (120)
T ss_pred CCChHHHHHHHHHHHcCCeEEEEECCCCCcHHH
Confidence 456889999999999999999999987655443
No 232
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=28.86 E-value=45 Score=28.58 Aligned_cols=35 Identities=17% Similarity=0.326 Sum_probs=28.6
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia 352 (658)
.-.+++.++++.++++|++++.+|+.+-......+
T Consensus 58 G~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~a 92 (128)
T cd05014 58 GETDELLNLLPHLKRRGAPIIAITGNPNSTLAKLS 92 (128)
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCCCchhhhC
Confidence 46688999999999999999999998765544443
No 233
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=27.42 E-value=95 Score=34.52 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=39.6
Q ss_pred HHHhhhccceee---------eccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHH
Q 041225 299 TAALIECDLTLL---------GATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAIS 350 (658)
Q Consensus 299 ~~~~~d~DgTll---------g~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ 350 (658)
.++.-|+|||+- ..+| .|=-..++.+...+.+++|+++..||.|....|-.
T Consensus 531 kIVISDIDGTITKSDvLGh~lp~iG-kDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~ 590 (738)
T KOG2116|consen 531 KIVISDIDGTITKSDVLGHVLPMIG-KDWTHTGVAKLYTKIKENGYKILYLSARAIGQADS 590 (738)
T ss_pred cEEEecCCCceEhhhhhhhhhhhhc-CcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHH
Confidence 446678898864 3344 44456789999999999999999999998876643
No 234
>PF11549 Sec31: Protein transport protein SEC31; InterPro: IPR021614 Sec31 is involved in COPII coat formation as it forms through the sequential binding of three cytoplasmic proteins: Sar1, Sec23/24 and Sec13/31. Sec13/31 is recruited by the pre-budding complex and polymerisation of Sec13/31 occurs to form an octahedral cage that is the outer shell of the COPII coat []. Sec13/31 is a hetero-tetramer which is organised as a linear array of alpha-solenoid and beta-propeller domains to form a rod in which twenty-four copies assemble to form the COPII cub-octahedron []. ; PDB: 2QTV_D.
Probab=27.35 E-value=22 Score=24.58 Aligned_cols=11 Identities=36% Similarity=0.546 Sum_probs=3.8
Q ss_pred cCCcCChhhhh
Q 041225 495 GDGANDVSMIQ 505 (658)
Q Consensus 495 GDg~NDi~Ml~ 505 (658)
-||.||+++--
T Consensus 23 NdGWNDLpl~v 33 (51)
T PF11549_consen 23 NDGWNDLPLKV 33 (51)
T ss_dssp HS-TT---S--
T ss_pred cCcccccchhh
Confidence 38999999653
No 235
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=25.63 E-value=1.1e+02 Score=26.09 Aligned_cols=39 Identities=26% Similarity=0.512 Sum_probs=29.0
Q ss_pred cCCChHHHHHHHHhcCC-eEEEEecCChhHHHHHHHHcCc
Q 041225 319 LQDGVPEAIEALRQAGI-KVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 319 l~~~~~~aI~~l~~~GI-~v~i~TGr~~~~a~~ia~~~gl 357 (658)
..+.+.+.++++.+.|+ .+|+.+|.....+...+++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 45678899999999999 6899999888889999999886
No 236
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=25.56 E-value=1e+02 Score=31.19 Aligned_cols=59 Identities=17% Similarity=0.098 Sum_probs=43.2
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhc----CCeEEEEecCC--h--hHHHHHHHHcCccCCCcc
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQA----GIKVWVLTGDK--Q--DTAISIALSCKLLTPDMQ 363 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~----GI~v~i~TGr~--~--~~a~~ia~~~gl~~~~~~ 363 (658)
+.+|+||.|+- -...-+++.+|++.|.+. .|.++++|--. . ..|..+...+|.-...++
T Consensus 38 fafDIDGVL~R----G~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dq 104 (389)
T KOG1618|consen 38 FAFDIDGVLFR----GHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQ 104 (389)
T ss_pred EEEecccEEEe----cCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHH
Confidence 45899998875 236778999999999999 89999998432 2 345667777776444333
No 237
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=24.75 E-value=4.8e+02 Score=22.89 Aligned_cols=96 Identities=16% Similarity=0.153 Sum_probs=57.2
Q ss_pred HHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhc
Q 041225 254 EYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQA 333 (658)
Q Consensus 254 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~ 333 (658)
.+...|++|+.++... +.+++.+ .+ .+.+-.+++.......-.+..++.+++|+++
T Consensus 26 ~lr~~G~eVi~LG~~v-p~e~i~~---------------------~a--~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 26 ALTEAGFEVINLGVMT-SQEEFID---------------------AA--IETDADAILVSSLYGHGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHCCCEEEECCCCC-CHHHHHH---------------------HH--HHcCCCEEEEcCccccCHHHHHHHHHHHHhc
Confidence 4567899999998654 3333221 22 2334445555444455667788999999998
Q ss_pred CC--eEEEEecCC------hhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHH
Q 041225 334 GI--KVWVLTGDK------QDTAISIALSCKLLTPDMQQIIINGNSEEECKDL 378 (658)
Q Consensus 334 GI--~v~i~TGr~------~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~i 378 (658)
|. ..+++-|.. +.....-++++|+. .++--+.+.+++...
T Consensus 82 ~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~~-----~vf~~~~~~~~i~~~ 129 (137)
T PRK02261 82 GLGDILLYVGGNLVVGKHDFEEVEKKFKEMGFD-----RVFPPGTDPEEAIDD 129 (137)
T ss_pred CCCCCeEEEECCCCCCccChHHHHHHHHHcCCC-----EEECcCCCHHHHHHH
Confidence 54 346677765 34556678888852 344444444444333
No 238
>PF05198 IF3_N: Translation initiation factor IF-3, N-terminal domain; InterPro: IPR019814 Initiation factor 3 (IF-3) (gene infC) is one of the three factors required for the initiation of protein biosynthesis in bacteria. IF-3 is thought to function as a fidelity factor during the assembly of the ternary initiation complex which consist of the 30S ribosomal subunit, the initiator tRNA and the messenger RNA. IF-3 is a basic protein that binds to the 30S ribosomal subunit []. The chloroplast initiation factor IF-3(chl) is a protein that enhances the poly(A,U,G)-dependent binding of the initiator tRNA to chloroplast ribosomal 30s subunits in which the central section is evolutionary related to the sequence of bacterial IF-3 []. ; GO: 0003743 translation initiation factor activity, 0006413 translational initiation; PDB: 1TIF_A.
Probab=24.63 E-value=1.2e+02 Score=23.54 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=25.6
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
.+|.||+.+|.+. ..+|++.++++|...+.++..
T Consensus 17 lI~~~g~~lGv~~--------~~eAl~~A~~~~lDLV~v~~~ 50 (76)
T PF05198_consen 17 LIDEDGEQLGVMS--------LREALRLAKEKGLDLVEVSPN 50 (76)
T ss_dssp EE-TTS-EEEEEE--------HHHHHHHHHHTT-EEEEEETT
T ss_pred EECCCCcEeceEE--------HHHHHHHHHHcCCcEEEEcCC
Confidence 4678999998754 568999999999999999844
No 239
>TIGR00156 conserved hypothetical protein TIGR00156. As of the last revision, this family consists only of two proteins from Escherichia coli and one from the related species Haemophilus influenzae.
Probab=24.06 E-value=51 Score=28.49 Aligned_cols=27 Identities=30% Similarity=0.485 Sum_probs=22.5
Q ss_pred eeeccCCcccccccceEEEeccCcccc
Q 041225 27 FQCRTLSINEDLGQIRYIFSDKTGTLT 53 (658)
Q Consensus 27 i~vr~~~~~e~Lg~v~~i~~DKTGTLT 53 (658)
-++=...+++.+|.=.|+|-|+|||++
T Consensus 59 ~V~L~G~Iv~~l~~d~Y~F~D~TG~I~ 85 (126)
T TIGR00156 59 SVTLRGNIISHIGDDRYVFRDKSGEIN 85 (126)
T ss_pred EEEEEEEEEEEeCCceEEEECCCCCEE
Confidence 344567888999998999999999876
No 240
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=23.59 E-value=2.1e+02 Score=24.95 Aligned_cols=81 Identities=17% Similarity=0.229 Sum_probs=53.0
Q ss_pred HHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHh
Q 041225 253 SEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQ 332 (658)
Q Consensus 253 ~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~ 332 (658)
..|...|++|+-.+... +.+++-+ ...+.|-..++..++...-.+..++.++.|++
T Consensus 24 ~~l~~~GfeVi~lg~~~-s~e~~v~-----------------------aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~ 79 (132)
T TIGR00640 24 TAYADLGFDVDVGPLFQ-TPEEIAR-----------------------QAVEADVHVVGVSSLAGGHLTLVPALRKELDK 79 (132)
T ss_pred HHHHhCCcEEEECCCCC-CHHHHHH-----------------------HHHHcCCCEEEEcCchhhhHHHHHHHHHHHHh
Confidence 45677899998887653 3333221 22355666777766665666778899999999
Q ss_pred cCC-e-EEEEecCChhHHHHHHHHcCc
Q 041225 333 AGI-K-VWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 333 ~GI-~-v~i~TGr~~~~a~~ia~~~gl 357 (658)
+|. . .+++-|-.+..-....+++|+
T Consensus 80 ~g~~~i~vivGG~~~~~~~~~l~~~Gv 106 (132)
T TIGR00640 80 LGRPDILVVVGGVIPPQDFDELKEMGV 106 (132)
T ss_pred cCCCCCEEEEeCCCChHhHHHHHHCCC
Confidence 886 3 456655555544556777887
No 241
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=23.27 E-value=5.1e+02 Score=22.70 Aligned_cols=96 Identities=10% Similarity=0.094 Sum_probs=54.0
Q ss_pred HHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhc
Q 041225 254 EYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQA 333 (658)
Q Consensus 254 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~ 333 (658)
.+...|++|+-++...-+++-.. . ..+.|-.+++..++--.--+..++.++.|+++
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~----------------------a--a~~~~adiVglS~l~~~~~~~~~~~~~~l~~~ 79 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIK----------------------A--AIETKADAILVSSLYGHGEIDCKGLRQKCDEA 79 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHH----------------------H--HHHcCCCEEEEecccccCHHHHHHHHHHHHHC
Confidence 45678999999987654333211 1 12334445554443333334567888999999
Q ss_pred CC--eEEEEecCCh---hH---HHHHHHHcCccCCCccEEEEcCCCHHHHHHH
Q 041225 334 GI--KVWVLTGDKQ---DT---AISIALSCKLLTPDMQQIIINGNSEEECKDL 378 (658)
Q Consensus 334 GI--~v~i~TGr~~---~~---a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~i 378 (658)
|. ..|++-|-.. .. ...-++++|+. -++--+.+.+++-..
T Consensus 80 gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv~-----~vF~pgt~~~~iv~~ 127 (134)
T TIGR01501 80 GLEGILLYVGGNLVVGKQDFPDVEKRFKEMGFD-----RVFAPGTPPEVVIAD 127 (134)
T ss_pred CCCCCEEEecCCcCcChhhhHHHHHHHHHcCCC-----EEECcCCCHHHHHHH
Confidence 86 5677877532 11 23457888852 244444454444333
No 242
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=23.24 E-value=9.5e+02 Score=25.80 Aligned_cols=72 Identities=19% Similarity=0.344 Sum_probs=44.4
Q ss_pred HHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHh
Q 041225 253 SEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQ 332 (658)
Q Consensus 253 ~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~ 332 (658)
..|..+|++|+++|.-.....-+++... .. -..+-.+.+. +-+..+-+=++++++.+++
T Consensus 122 ~~lkk~~~kvllVaaD~~RpAA~eQL~~------------------La--~q~~v~~f~~-~~~~~Pv~Iak~al~~ak~ 180 (451)
T COG0541 122 KYLKKKGKKVLLVAADTYRPAAIEQLKQ------------------LA--EQVGVPFFGS-GTEKDPVEIAKAALEKAKE 180 (451)
T ss_pred HHHHHcCCceEEEecccCChHHHHHHHH------------------HH--HHcCCceecC-CCCCCHHHHHHHHHHHHHH
Confidence 3445589999999987665543332111 11 1233445665 2133344467899999999
Q ss_pred cCCeEEEE--ecCCh
Q 041225 333 AGIKVWVL--TGDKQ 345 (658)
Q Consensus 333 ~GI~v~i~--TGr~~ 345 (658)
.++.++|+ .||..
T Consensus 181 ~~~DvvIvDTAGRl~ 195 (451)
T COG0541 181 EGYDVVIVDTAGRLH 195 (451)
T ss_pred cCCCEEEEeCCCccc
Confidence 99888777 57765
No 243
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=22.49 E-value=1.8e+02 Score=27.89 Aligned_cols=68 Identities=19% Similarity=0.207 Sum_probs=40.7
Q ss_pred CcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHH
Q 041225 217 NSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKL 296 (658)
Q Consensus 217 ~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (658)
..+.+|+||.|+.- .|.-. ++.+.-+...|.+ .-.+-.|++++..+-.+.|.+-.+-
T Consensus 139 ~~v~lFmKG~p~~P--~CGFS-----------~~~v~iL~~~nV~--~~~fdIL~DeelRqglK~fSdWPTf-------- 195 (227)
T KOG0911|consen 139 KPVMLFMKGTPEEP--KCGFS-----------RQLVGILQSHNVN--YTIFDVLTDEELRQGLKEFSDWPTF-------- 195 (227)
T ss_pred CeEEEEecCCCCcc--ccccc-----------HHHHHHHHHcCCC--eeEEeccCCHHHHHHhhhhcCCCCc--------
Confidence 45789999999864 34321 1233444555655 4566677788776666655542221
Q ss_pred HHHHHhhhccceeee
Q 041225 297 RQTAALIECDLTLLG 311 (658)
Q Consensus 297 ~~~~~~~d~DgTllg 311 (658)
=.+=.+|.|+|
T Consensus 196 ----PQlyI~GEFiG 206 (227)
T KOG0911|consen 196 ----PQLYVKGEFIG 206 (227)
T ss_pred ----cceeECCEecc
Confidence 12347899998
No 244
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=22.15 E-value=69 Score=29.48 Aligned_cols=30 Identities=30% Similarity=0.390 Sum_probs=26.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
.-.+++.++++.++++|++++.+|+.+...
T Consensus 112 G~t~~~i~~~~~ak~~Ga~vI~IT~~~~s~ 141 (177)
T cd05006 112 GNSPNVLKALEAAKERGMKTIALTGRDGGK 141 (177)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCCCCc
Confidence 456889999999999999999999986555
No 245
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=21.56 E-value=3.1e+02 Score=24.25 Aligned_cols=62 Identities=19% Similarity=0.217 Sum_probs=43.6
Q ss_pred HHHHHHHHhcCCeEEEEecCC--hhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHh
Q 041225 324 PEAIEALRQAGIKVWVLTGDK--QDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKAR 385 (658)
Q Consensus 324 ~~aI~~l~~~GI~v~i~TGr~--~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~ 385 (658)
.+..+.|.++|-+.+++++|+ ...+.....++.=....-..+..+..+.+.++.+++...+.
T Consensus 14 ~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (167)
T PF00106_consen 14 RALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKR 77 (167)
T ss_dssp HHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccc
Confidence 356677888888999999998 66666666655411122344555677889999999888854
No 246
>PF13042 DUF3902: Protein of unknown function (DUF3902)
Probab=21.35 E-value=5.9e+02 Score=22.68 Aligned_cols=52 Identities=15% Similarity=0.257 Sum_probs=33.3
Q ss_pred HHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccc
Q 041225 568 LFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVV 624 (658)
Q Consensus 568 ~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~ 624 (658)
...++...-++...+.-.|.++..-.+++....+.+ ++..+-+ ..+|-+|+.
T Consensus 84 gI~~qll~~WslsiM~wYWll~LlLyl~tiisLViL-Vf~n~k~----~~~~~~y~~ 135 (161)
T PF13042_consen 84 GIIHQLLGKWSLSIMMWYWLLILLLYLITIISLVIL-VFVNRKN----SNYSILYKI 135 (161)
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhccCCC----CCccHHHHH
Confidence 344455555677777778888887778887777777 3433222 355767766
No 247
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=21.19 E-value=82 Score=29.00 Aligned_cols=35 Identities=14% Similarity=0.169 Sum_probs=28.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia 352 (658)
.-.+++.++++.++++|++++.+|+.........+
T Consensus 83 G~t~~~i~~~~~ak~~g~~ii~IT~~~~s~la~~a 117 (179)
T TIGR03127 83 GETESLVTVAKKAKEIGATVAAITTNPESTLGKLA 117 (179)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEECCCCCchHHhC
Confidence 35678889999999999999999998876655544
No 248
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=20.69 E-value=5.3e+02 Score=25.24 Aligned_cols=60 Identities=15% Similarity=0.224 Sum_probs=45.9
Q ss_pred HHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcC
Q 041225 325 EAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYG 387 (658)
Q Consensus 325 ~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~ 387 (658)
.+-+.|.++|.+ ++++||..+....++.+++= ..-..+..+-.+.+.++..+....+.++
T Consensus 21 A~A~~l~~~G~~-vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 21 ATARALAEAGAK-VVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred HHHHHHHHCCCe-EEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 345668899997 57899999999999999873 1223556677788899999988877654
No 249
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=20.60 E-value=67 Score=28.23 Aligned_cols=25 Identities=40% Similarity=0.469 Sum_probs=20.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEec
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
--++.+.++++..|++|.+++-+||
T Consensus 114 G~s~~vi~a~~~Ak~~G~~vIalTg 138 (138)
T PF13580_consen 114 GNSPNVIEAAEEAKERGMKVIALTG 138 (138)
T ss_dssp S-SHHHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3568889999999999999999997
No 250
>COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=20.32 E-value=6.2e+02 Score=25.31 Aligned_cols=29 Identities=21% Similarity=0.338 Sum_probs=24.6
Q ss_pred CCChHHHHHHHHhcCC-eEEEEecCChhHH
Q 041225 320 QDGVPEAIEALRQAGI-KVWVLTGDKQDTA 348 (658)
Q Consensus 320 ~~~~~~aI~~l~~~GI-~v~i~TGr~~~~a 348 (658)
+|-..-.++++.++|| .++++|||+....
T Consensus 35 KP~IqYiVeEa~~aGIe~i~iVTgr~K~~I 64 (291)
T COG1210 35 KPLIQYIVEEAVAAGIEEILIVTGRGKRAI 64 (291)
T ss_pred chhHHHHHHHHHHcCCCEEEEEecCCcchH
Confidence 5667789999999999 7999999987643
No 251
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.18 E-value=1.9e+02 Score=28.35 Aligned_cols=39 Identities=21% Similarity=0.267 Sum_probs=30.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK 356 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~g 356 (658)
.+|+++.+.+..|+..+|++.+.|.--......+.++..
T Consensus 138 ~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~ 176 (298)
T KOG3128|consen 138 ALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKL 176 (298)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHh
Confidence 478888999999999999999998776666666555443
No 252
>PRK13937 phosphoheptose isomerase; Provisional
Probab=20.12 E-value=86 Score=29.28 Aligned_cols=34 Identities=26% Similarity=0.288 Sum_probs=27.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISI 351 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~i 351 (658)
--.+++.++++.++++|++++.+||.........
T Consensus 117 G~t~~~~~~~~~ak~~g~~~I~iT~~~~s~L~~~ 150 (188)
T PRK13937 117 GNSPNVLAALEKARELGMKTIGLTGRDGGKMKEL 150 (188)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEeCCCCChhHHh
Confidence 3678899999999999999999999876554443
No 253
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=20.02 E-value=6.8e+02 Score=22.87 Aligned_cols=101 Identities=20% Similarity=0.265 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHH
Q 041225 246 HITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPE 325 (658)
Q Consensus 246 ~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~ 325 (658)
..+.+.+......|-++-+++|...... ... ....++.+...... .-.++...
T Consensus 64 ~Dil~al~~a~~~~~~Iavv~~~~~~~~-~~~---------------------~~~ll~~~i~~~~~-----~~~~e~~~ 116 (176)
T PF06506_consen 64 FDILRALAKAKKYGPKIAVVGYPNIIPG-LES---------------------IEELLGVDIKIYPY-----DSEEEIEA 116 (176)
T ss_dssp HHHHHHHHHCCCCTSEEEEEEESS-SCC-HHH---------------------HHHHHT-EEEEEEE-----SSHHHHHH
T ss_pred hHHHHHHHHHHhcCCcEEEEecccccHH-HHH---------------------HHHHhCCceEEEEE-----CCHHHHHH
Confidence 3455666777788889999999987643 111 11234556666554 12446789
Q ss_pred HHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHH
Q 041225 326 AIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAK 383 (658)
Q Consensus 326 aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~ 383 (658)
+|+++++.|+.+++-.| .+..+|++.|+- .+.. ....+.++..+....
T Consensus 117 ~i~~~~~~G~~viVGg~----~~~~~A~~~gl~-----~v~i-~sg~esi~~Al~eA~ 164 (176)
T PF06506_consen 117 AIKQAKAEGVDVIVGGG----VVCRLARKLGLP-----GVLI-ESGEESIRRALEEAL 164 (176)
T ss_dssp HHHHHHHTT--EEEESH----HHHHHHHHTTSE-----EEES-S--HHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEECCH----HHHHHHHHcCCc-----EEEE-EecHHHHHHHHHHHH
Confidence 99999999998877665 356788888873 1222 234556666555544
Done!