Query 041225
Match_columns 658
No_of_seqs 358 out of 3208
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 07:57:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041225.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041225hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 100.0 4.4E-62 1.5E-66 571.6 39.7 478 23-622 362-849 (1034)
2 3ar4_A Sarcoplasmic/endoplasmi 100.0 2.5E-60 8.4E-65 556.3 34.2 479 24-624 329-827 (995)
3 2zxe_A Na, K-ATPase alpha subu 100.0 1.2E-59 4E-64 550.1 32.4 478 23-622 357-844 (1028)
4 1mhs_A Proton pump, plasma mem 100.0 3.5E-56 1.2E-60 507.5 25.9 410 24-637 355-765 (920)
5 3b8c_A ATPase 2, plasma membra 100.0 5E-54 1.7E-58 490.4 3.5 409 23-634 305-716 (885)
6 3rfu_A Copper efflux ATPase; a 100.0 1.2E-40 4.2E-45 373.1 21.7 292 23-567 402-695 (736)
7 3j09_A COPA, copper-exporting 100.0 9.7E-40 3.3E-44 368.8 27.5 289 23-567 386-675 (723)
8 3j08_A COPA, copper-exporting 100.0 1.4E-39 4.7E-44 362.5 27.5 289 23-567 308-597 (645)
9 2yj3_A Copper-transporting ATP 99.9 2.2E-27 7.6E-32 236.7 0.0 142 302-552 120-262 (263)
10 3a1c_A Probable copper-exporti 99.9 1.2E-23 4.2E-28 212.8 18.5 274 22-551 13-287 (287)
11 3skx_A Copper-exporting P-type 99.9 9.4E-22 3.2E-26 198.2 21.1 275 29-559 1-276 (280)
12 4dw8_A Haloacid dehalogenase-l 99.9 2.6E-22 8.9E-27 202.4 9.9 229 299-534 6-258 (279)
13 3dao_A Putative phosphatse; st 99.9 1.4E-21 4.8E-26 197.4 15.3 230 299-536 22-274 (283)
14 3mpo_A Predicted hydrolase of 99.9 8.4E-22 2.9E-26 198.7 12.4 228 299-533 6-257 (279)
15 3pgv_A Haloacid dehalogenase-l 99.9 5.6E-22 1.9E-26 200.5 10.3 232 297-534 20-272 (285)
16 2pq0_A Hypothetical conserved 99.8 8.7E-21 3E-25 188.9 14.8 228 299-536 4-246 (258)
17 3dnp_A Stress response protein 99.8 6.3E-21 2.1E-25 193.4 13.0 231 298-534 6-263 (290)
18 3l7y_A Putative uncharacterize 99.8 3.1E-21 1.1E-25 196.9 10.5 232 298-535 37-290 (304)
19 1rkq_A Hypothetical protein YI 99.8 3E-20 1E-24 187.4 14.2 229 299-534 6-259 (282)
20 3fzq_A Putative hydrolase; YP_ 99.8 5E-20 1.7E-24 185.0 15.4 230 299-537 6-264 (274)
21 3r4c_A Hydrolase, haloacid deh 99.8 1.2E-20 4.2E-25 188.9 10.9 231 299-537 13-258 (268)
22 1rlm_A Phosphatase; HAD family 99.8 2.4E-20 8.2E-25 187.0 9.9 228 299-534 4-252 (271)
23 1nf2_A Phosphatase; structural 99.8 1.4E-19 4.9E-24 181.0 13.9 228 300-534 4-251 (268)
24 2b30_A Pvivax hypothetical pro 99.8 1.7E-19 5.7E-24 183.4 10.9 229 299-534 28-286 (301)
25 1nrw_A Hypothetical protein, h 99.8 7E-19 2.4E-23 178.0 14.8 233 299-536 5-279 (288)
26 2rbk_A Putative uncharacterize 99.8 9.7E-19 3.3E-23 174.3 9.5 226 300-534 4-248 (261)
27 2zos_A MPGP, mannosyl-3-phosph 99.8 6.7E-18 2.3E-22 166.8 15.0 207 300-532 4-240 (249)
28 1l6r_A Hypothetical protein TA 99.8 1.5E-18 5E-23 168.7 9.6 194 299-535 6-215 (227)
29 1xvi_A MPGP, YEDP, putative ma 99.7 3.2E-17 1.1E-21 164.4 13.6 219 299-534 10-259 (275)
30 1u02_A Trehalose-6-phosphate p 99.7 1.2E-17 4.2E-22 163.7 8.3 190 300-531 3-211 (239)
31 2fue_A PMM 1, PMMH-22, phospho 99.7 2.4E-17 8.4E-22 164.1 9.9 216 299-532 14-258 (262)
32 3f9r_A Phosphomannomutase; try 99.7 1.9E-18 6.5E-23 169.9 1.7 210 299-527 5-242 (246)
33 3gwi_A Magnesium-transporting 99.7 2.8E-18 9.7E-23 157.0 1.6 127 156-318 33-165 (170)
34 1wr8_A Phosphoglycolate phosph 99.7 9E-17 3.1E-21 156.8 11.9 192 300-534 5-214 (231)
35 3zx4_A MPGP, mannosyl-3-phosph 99.7 2.2E-16 7.5E-21 157.0 13.6 206 301-534 3-236 (259)
36 1s2o_A SPP, sucrose-phosphatas 99.7 1.2E-16 4E-21 157.2 10.9 203 300-534 5-230 (244)
37 2amy_A PMM 2, phosphomannomuta 99.7 4.4E-17 1.5E-21 160.7 7.7 211 299-529 7-246 (246)
38 4fe3_A Cytosolic 5'-nucleotida 99.6 4.8E-16 1.6E-20 157.7 11.0 144 316-540 139-291 (297)
39 1k1e_A Deoxy-D-mannose-octulos 99.5 3.1E-14 1.1E-18 132.9 8.1 150 299-558 9-173 (180)
40 3gyg_A NTD biosynthesis operon 99.5 2.3E-13 8E-18 137.4 14.5 198 300-535 24-273 (289)
41 3mn1_A Probable YRBI family ph 99.5 4.2E-14 1.4E-18 133.0 5.7 152 299-561 20-187 (189)
42 3ewi_A N-acylneuraminate cytid 99.4 9.4E-14 3.2E-18 127.1 7.7 60 473-533 81-143 (168)
43 3n07_A 3-deoxy-D-manno-octulos 99.4 7.9E-14 2.7E-18 131.4 6.8 125 299-533 26-160 (195)
44 3mmz_A Putative HAD family hyd 99.4 2.2E-13 7.5E-18 126.5 6.1 124 299-533 13-146 (176)
45 3n1u_A Hydrolase, HAD superfam 99.3 2.4E-12 8.2E-17 121.1 7.9 125 299-533 20-154 (191)
46 3ij5_A 3-deoxy-D-manno-octulos 99.3 3.6E-12 1.2E-16 121.5 7.9 124 300-533 51-184 (211)
47 3e8m_A Acylneuraminate cytidyl 99.3 2.6E-12 9E-17 117.7 6.1 124 300-533 6-139 (164)
48 2r8e_A 3-deoxy-D-manno-octulos 99.2 1.5E-11 5.3E-16 115.3 7.8 124 299-532 27-160 (188)
49 2p9j_A Hypothetical protein AQ 99.2 1.1E-11 3.9E-16 113.2 5.4 127 298-534 9-145 (162)
50 3pdw_A Uncharacterized hydrola 99.2 4.2E-12 1.4E-16 126.4 2.7 67 299-369 7-76 (266)
51 3qgm_A P-nitrophenyl phosphata 99.1 7.7E-11 2.6E-15 117.3 7.5 68 299-370 9-79 (268)
52 1l7m_A Phosphoserine phosphata 99.1 4.9E-10 1.7E-14 106.6 10.3 58 472-531 140-200 (211)
53 1vjr_A 4-nitrophenylphosphatas 99.0 1.1E-10 3.9E-15 116.2 5.0 68 300-371 19-89 (271)
54 2c4n_A Protein NAGD; nucleotid 99.0 5.8E-11 2E-15 116.3 2.6 67 468-534 170-246 (250)
55 3n28_A Phosphoserine phosphata 99.0 3.8E-10 1.3E-14 116.2 8.0 150 318-559 178-331 (335)
56 3m1y_A Phosphoserine phosphata 99.0 1E-09 3.5E-14 105.1 10.2 135 318-544 75-212 (217)
57 2x4d_A HLHPP, phospholysine ph 99.0 2.2E-10 7.5E-15 113.8 5.7 67 299-365 13-82 (271)
58 3epr_A Hydrolase, haloacid deh 99.0 2.7E-10 9.4E-15 113.1 4.3 68 299-370 6-76 (264)
59 4ap9_A Phosphoserine phosphata 98.9 1.8E-09 6.1E-14 101.8 7.2 62 469-538 134-195 (201)
60 3kd3_A Phosphoserine phosphohy 98.9 6.8E-09 2.3E-13 99.1 9.9 130 318-539 82-218 (219)
61 3l8h_A Putative haloacid dehal 98.8 5.9E-09 2E-13 96.7 7.1 46 300-345 3-54 (179)
62 1te2_A Putative phosphatase; s 98.8 2.5E-08 8.4E-13 95.7 10.2 62 477-538 153-220 (226)
63 1y8a_A Hypothetical protein AF 98.7 1.2E-08 4.2E-13 104.7 8.3 64 469-534 201-269 (332)
64 3m9l_A Hydrolase, haloacid deh 98.7 8.9E-09 3E-13 97.6 6.4 120 318-539 70-195 (205)
65 3p96_A Phosphoserine phosphata 98.7 3.9E-08 1.3E-12 104.2 11.9 138 318-548 256-398 (415)
66 3mc1_A Predicted phosphatase, 98.7 1.5E-08 5E-13 97.5 7.8 122 318-539 86-214 (226)
67 4ex6_A ALNB; modified rossman 98.7 1.3E-08 4.6E-13 98.6 5.4 121 318-538 104-231 (237)
68 2oyc_A PLP phosphatase, pyrido 98.6 1.4E-07 4.8E-12 95.6 12.2 66 299-368 22-91 (306)
69 2wm8_A MDP-1, magnesium-depend 98.6 6E-08 2.1E-12 90.5 8.1 60 299-358 28-109 (187)
70 4eze_A Haloacid dehalogenase-l 98.6 1.1E-07 3.8E-12 96.5 10.2 127 318-536 179-308 (317)
71 2gmw_A D,D-heptose 1,7-bisphos 98.6 9E-08 3.1E-12 91.2 8.9 47 299-345 26-77 (211)
72 3sd7_A Putative phosphatase; s 98.6 6.5E-08 2.2E-12 94.0 7.7 122 318-539 110-239 (240)
73 2wf7_A Beta-PGM, beta-phosphog 98.6 4.1E-08 1.4E-12 93.8 5.5 59 478-538 149-210 (221)
74 3s6j_A Hydrolase, haloacid deh 98.5 4.6E-08 1.6E-12 94.3 5.1 122 318-539 91-219 (233)
75 3nas_A Beta-PGM, beta-phosphog 98.5 1.1E-07 3.8E-12 91.8 7.5 60 477-538 149-211 (233)
76 3d6j_A Putative haloacid dehal 98.5 8.7E-08 3E-12 91.7 6.4 63 476-538 147-216 (225)
77 2ho4_A Haloacid dehalogenase-l 98.5 3.1E-07 1.1E-11 90.3 10.1 65 299-367 8-75 (259)
78 2pib_A Phosphorylated carbohyd 98.5 1.3E-07 4.4E-12 89.8 6.8 120 318-538 84-211 (216)
79 2go7_A Hydrolase, haloacid deh 98.5 1.2E-07 4.1E-12 89.2 5.7 56 477-537 143-202 (207)
80 3e58_A Putative beta-phosphogl 98.5 2.8E-07 9.5E-12 87.3 7.9 120 318-537 89-212 (214)
81 1swv_A Phosphonoacetaldehyde h 98.5 1.1E-07 3.8E-12 94.0 5.3 40 318-357 103-142 (267)
82 1rku_A Homoserine kinase; phos 98.5 1.6E-06 5.3E-11 82.0 13.0 122 318-535 69-192 (206)
83 3um9_A Haloacid dehalogenase, 98.4 3.5E-07 1.2E-11 87.9 7.5 121 318-538 96-222 (230)
84 2om6_A Probable phosphoserine 98.4 5E-07 1.7E-11 87.0 8.7 62 477-538 161-228 (235)
85 3nuq_A Protein SSM1, putative 98.4 1.4E-07 4.8E-12 94.3 4.3 125 318-538 142-277 (282)
86 3ddh_A Putative haloacid dehal 98.4 8.3E-07 2.8E-11 85.2 9.6 115 318-537 105-231 (234)
87 3fvv_A Uncharacterized protein 98.4 1E-06 3.5E-11 85.0 10.1 41 318-358 92-132 (232)
88 2o2x_A Hypothetical protein; s 98.4 1.9E-07 6.5E-12 89.5 4.3 45 301-345 34-83 (218)
89 3iru_A Phoshonoacetaldehyde hy 98.4 3E-07 1E-11 91.2 5.8 40 318-357 111-150 (277)
90 3u26_A PF00702 domain protein; 98.4 8.1E-07 2.8E-11 85.6 8.5 63 476-539 157-226 (234)
91 3umb_A Dehalogenase-like hydro 98.3 3.8E-07 1.3E-11 88.0 5.9 122 318-539 99-226 (233)
92 1nnl_A L-3-phosphoserine phosp 98.3 1.9E-06 6.4E-11 82.7 9.8 128 318-536 86-220 (225)
93 3qnm_A Haloacid dehalogenase-l 98.3 9.5E-07 3.2E-11 85.3 7.5 120 318-538 107-231 (240)
94 2hdo_A Phosphoglycolate phosph 98.3 3.5E-07 1.2E-11 86.7 3.6 62 474-536 136-205 (209)
95 3ib6_A Uncharacterized protein 98.3 2.4E-06 8.3E-11 79.6 9.2 61 299-359 4-78 (189)
96 2hsz_A Novel predicted phospha 98.3 9.1E-07 3.1E-11 86.2 6.3 41 318-358 114-154 (243)
97 3kzx_A HAD-superfamily hydrola 98.2 2.2E-06 7.4E-11 82.5 8.8 41 318-358 103-143 (231)
98 3l5k_A Protein GS1, haloacid d 98.2 4.3E-07 1.5E-11 88.8 3.7 62 476-538 173-242 (250)
99 3dv9_A Beta-phosphoglucomutase 98.2 1.2E-06 4.2E-11 85.1 6.8 64 475-538 166-236 (247)
100 2nyv_A Pgpase, PGP, phosphogly 98.2 2E-06 6.7E-11 82.5 8.1 41 318-358 83-123 (222)
101 3qxg_A Inorganic pyrophosphata 98.2 1.3E-06 4.5E-11 84.8 6.9 63 475-538 167-237 (243)
102 4gxt_A A conserved functionall 98.2 1.1E-06 3.9E-11 91.0 6.5 40 318-357 221-260 (385)
103 2hcf_A Hydrolase, haloacid deh 98.2 1.8E-06 6E-11 83.2 7.2 41 318-358 93-134 (234)
104 2ah5_A COG0546: predicted phos 98.2 2.8E-06 9.5E-11 80.6 8.4 115 318-536 84-206 (210)
105 2no4_A (S)-2-haloacid dehaloge 98.2 2.3E-06 7.8E-11 83.0 8.0 41 318-358 105-145 (240)
106 4eek_A Beta-phosphoglucomutase 98.2 1.1E-06 3.9E-11 86.2 5.2 40 318-357 110-149 (259)
107 1zrn_A L-2-haloacid dehalogena 98.2 1.3E-06 4.4E-11 84.1 5.4 41 318-358 95-135 (232)
108 3umc_A Haloacid dehalogenase; 98.2 9.7E-07 3.3E-11 86.3 4.4 67 473-539 172-250 (254)
109 2fdr_A Conserved hypothetical 98.2 1.4E-06 4.7E-11 83.6 5.3 65 474-538 143-218 (229)
110 3ed5_A YFNB; APC60080, bacillu 98.2 9.9E-06 3.4E-10 78.0 11.4 121 318-539 103-230 (238)
111 2hoq_A Putative HAD-hydrolase 98.1 9E-06 3.1E-10 78.8 10.9 41 318-358 94-134 (241)
112 2i33_A Acid phosphatase; HAD s 98.1 1.1E-06 3.9E-11 85.9 4.1 60 299-358 60-144 (258)
113 2hi0_A Putative phosphoglycola 98.1 2.7E-06 9.1E-11 82.6 6.4 40 318-357 110-149 (240)
114 1svj_A Potassium-transporting 98.1 1.3E-05 4.6E-10 71.2 10.2 109 153-321 47-156 (156)
115 3umg_A Haloacid dehalogenase; 98.1 2.8E-06 9.6E-11 82.7 5.2 66 475-540 170-247 (254)
116 1qq5_A Protein (L-2-haloacid d 98.0 5.1E-06 1.7E-10 81.3 6.9 39 318-358 93-131 (253)
117 2oda_A Hypothetical protein ps 98.0 7.6E-06 2.6E-10 76.7 7.5 52 299-351 7-69 (196)
118 2pr7_A Haloacid dehalogenase/e 98.0 1E-06 3.5E-11 77.1 1.1 54 301-358 5-58 (137)
119 2obb_A Hypothetical protein; s 98.0 1.2E-06 4.2E-11 76.5 1.5 60 299-358 4-67 (142)
120 3nvb_A Uncharacterized protein 98.0 8.3E-06 2.8E-10 83.5 7.6 54 301-354 225-292 (387)
121 2qlt_A (DL)-glycerol-3-phospha 98.0 7.5E-06 2.6E-10 81.3 7.2 40 318-357 114-154 (275)
122 2fi1_A Hydrolase, haloacid deh 98.0 5E-06 1.7E-10 77.1 5.5 51 475-526 138-189 (190)
123 1yv9_A Hydrolase, haloacid deh 98.0 7.6E-06 2.6E-10 80.6 7.1 64 300-367 7-74 (264)
124 2w43_A Hypothetical 2-haloalka 98.0 9.2E-06 3.1E-10 76.3 6.9 39 318-358 74-112 (201)
125 2fea_A 2-hydroxy-3-keto-5-meth 98.0 2.2E-05 7.6E-10 75.8 9.6 65 472-538 148-214 (236)
126 2pke_A Haloacid delahogenase-l 97.9 9.2E-05 3.2E-09 72.0 12.5 39 318-357 112-150 (251)
127 3k1z_A Haloacid dehalogenase-l 97.9 1.5E-05 5.3E-10 78.4 6.7 52 487-539 177-235 (263)
128 3smv_A S-(-)-azetidine-2-carbo 97.8 7.4E-06 2.5E-10 78.9 3.6 52 487-538 171-233 (240)
129 1zjj_A Hypothetical protein PH 97.8 0.00014 4.9E-09 71.4 12.1 65 301-369 4-71 (263)
130 3pct_A Class C acid phosphatas 97.8 2.4E-05 8.3E-10 75.6 6.0 59 300-358 60-145 (260)
131 3ocu_A Lipoprotein E; hydrolas 97.7 2.6E-05 8.9E-10 75.5 4.6 59 300-358 60-145 (262)
132 2fpr_A Histidine biosynthesis 97.6 2.5E-05 8.6E-10 71.7 3.3 58 300-357 16-96 (176)
133 2i6x_A Hydrolase, haloacid deh 97.6 1.8E-05 6.2E-10 74.7 2.4 36 318-354 89-124 (211)
134 3vay_A HAD-superfamily hydrola 97.6 7.6E-05 2.6E-09 71.3 6.5 65 475-539 156-226 (230)
135 3cnh_A Hydrolase family protei 97.4 7.8E-05 2.7E-09 69.6 3.9 40 318-358 86-125 (200)
136 1xpj_A Hypothetical protein; s 97.4 3.4E-05 1.2E-09 66.4 1.1 47 301-347 4-53 (126)
137 2gfh_A Haloacid dehalogenase-l 97.3 0.00067 2.3E-08 66.4 8.8 40 318-358 121-160 (260)
138 4dcc_A Putative haloacid dehal 97.2 0.00015 5.1E-09 69.4 3.3 35 318-353 112-146 (229)
139 2b0c_A Putative phosphatase; a 97.2 3.3E-05 1.1E-09 72.5 -1.6 30 318-347 91-120 (206)
140 3kbb_A Phosphorylated carbohyd 97.1 0.0016 5.4E-08 61.4 8.9 42 318-359 84-125 (216)
141 2b82_A APHA, class B acid phos 96.9 6.5E-05 2.2E-09 71.2 -2.0 28 320-347 90-117 (211)
142 2kmv_A Copper-transporting ATP 96.9 0.0019 6.3E-08 59.2 7.3 44 151-197 34-79 (185)
143 2p11_A Hypothetical protein; p 96.6 0.0012 4.2E-08 63.1 4.0 39 318-357 96-134 (231)
144 4gib_A Beta-phosphoglucomutase 96.6 0.002 7E-08 62.4 5.5 47 487-536 186-233 (250)
145 1ltq_A Polynucleotide kinase; 96.6 0.00095 3.3E-08 66.9 3.1 47 301-347 162-217 (301)
146 4as2_A Phosphorylcholine phosp 96.5 0.0015 5E-08 65.9 4.4 39 318-356 143-181 (327)
147 3zvl_A Bifunctional polynucleo 96.3 0.0041 1.4E-07 65.2 6.4 45 300-344 60-113 (416)
148 2zg6_A Putative uncharacterize 96.1 0.012 4.1E-07 55.5 8.1 40 318-358 95-134 (220)
149 1qyi_A ZR25, hypothetical prot 96.1 0.0072 2.5E-07 62.3 6.7 43 318-360 215-257 (384)
150 2hx1_A Predicted sugar phospha 96.0 0.006 2.1E-07 60.3 5.5 64 299-366 15-82 (284)
151 1yns_A E-1 enzyme; hydrolase f 95.6 0.023 7.9E-07 55.3 7.6 37 318-354 130-166 (261)
152 2hhl_A CTD small phosphatase-l 94.8 0.0047 1.6E-07 57.2 -0.1 59 299-358 29-107 (195)
153 2ght_A Carboxy-terminal domain 94.2 0.016 5.4E-07 53.0 1.9 59 299-358 16-94 (181)
154 3kc2_A Uncharacterized protein 93.8 0.058 2E-06 54.8 5.5 56 300-359 15-74 (352)
155 4g9b_A Beta-PGM, beta-phosphog 92.4 0.076 2.6E-06 50.8 3.6 40 318-359 95-134 (243)
156 2arf_A Wilson disease ATPase; 91.4 0.57 2E-05 41.7 8.0 45 151-197 32-77 (165)
157 3i28_A Epoxide hydrolase 2; ar 91.4 0.15 5E-06 55.0 4.9 26 318-343 100-125 (555)
158 2g80_A Protein UTR4; YEL038W, 86.1 0.68 2.3E-05 44.5 4.8 34 318-355 125-158 (253)
159 1y8a_A Hypothetical protein AF 81.4 0.054 1.9E-06 54.8 -5.5 38 299-345 22-59 (332)
160 3bwv_A Putative 5'(3')-deoxyri 78.6 4.8 0.00016 35.8 7.3 25 318-343 69-93 (180)
161 2i7d_A 5'(3')-deoxyribonucleot 75.3 0.98 3.4E-05 41.1 1.6 40 318-357 73-113 (193)
162 3n28_A Phosphoserine phosphata 75.2 1.9 6.3E-05 43.3 3.8 43 317-359 42-95 (335)
163 3qle_A TIM50P; chaperone, mito 67.5 3.7 0.00013 37.7 3.5 56 301-357 37-97 (204)
164 1q92_A 5(3)-deoxyribonucleotid 66.3 2.3 7.7E-05 38.8 1.9 40 318-357 75-115 (197)
165 2pke_A Haloacid delahogenase-l 64.7 0.74 2.5E-05 43.7 -1.9 63 476-538 164-239 (251)
166 2hcf_A Hydrolase, haloacid deh 57.1 1.4 4.7E-05 41.0 -1.5 64 476-539 153-225 (234)
167 3vay_A HAD-superfamily hydrola 54.0 0.53 1.8E-05 43.9 -5.0 49 300-351 4-52 (230)
168 3ef0_A RNA polymerase II subun 51.5 7.2 0.00024 39.5 2.7 39 319-358 76-114 (372)
169 2pju_A Propionate catabolism o 48.3 1.5E+02 0.0051 27.3 11.0 99 248-384 95-193 (225)
170 2q5c_A NTRC family transcripti 41.9 1.9E+02 0.0065 25.8 12.3 101 247-384 82-182 (196)
171 3kzx_A HAD-superfamily hydrola 40.0 2.7 9.2E-05 39.0 -2.5 59 476-538 161-224 (231)
172 1ccw_A Protein (glutamate muta 39.2 64 0.0022 27.1 6.5 81 253-357 25-113 (137)
173 3shq_A UBLCP1; phosphatase, hy 36.0 17 0.0006 35.8 2.6 58 300-358 142-203 (320)
174 3u26_A PF00702 domain protein; 34.4 1.2 4.1E-05 41.5 -6.0 34 300-336 4-37 (234)
175 1pqh_A Aspartate 1-decarboxyla 31.1 19 0.00065 30.2 1.6 84 149-278 35-118 (143)
176 2hx1_A Predicted sugar phospha 30.9 45 0.0015 31.8 4.7 56 478-533 212-281 (284)
177 3ddh_A Putative haloacid dehal 30.0 3.6 0.00012 37.8 -3.4 33 299-334 9-41 (234)
178 3to5_A CHEY homolog; alpha(5)b 28.6 2.2E+02 0.0074 23.5 8.1 69 304-381 57-129 (134)
179 3d6j_A Putative haloacid dehal 28.3 2.4 8.2E-05 38.9 -5.0 29 478-507 173-201 (225)
180 3oid_A Enoyl-[acyl-carrier-pro 27.2 1.7E+02 0.006 27.1 8.1 62 325-386 19-80 (258)
181 4iiu_A 3-oxoacyl-[acyl-carrier 27.0 1.5E+02 0.0053 27.6 7.8 63 324-386 40-102 (267)
182 2yxb_A Coenzyme B12-dependent 24.6 2.4E+02 0.0083 24.2 7.9 80 254-357 41-122 (161)
183 3ewi_A N-acylneuraminate cytid 23.3 23 0.00079 31.1 0.9 23 36-58 4-26 (168)
184 1nnx_A Protein YGIW; structura 22.7 35 0.0012 27.5 1.7 27 27-53 39-65 (109)
185 4e3z_A Putative oxidoreductase 21.6 2E+02 0.0069 26.9 7.4 63 324-386 40-102 (272)
186 3heb_A Response regulator rece 21.4 3.3E+02 0.011 22.1 9.9 74 304-386 59-136 (152)
187 3oug_A Aspartate 1-decarboxyla 20.2 38 0.0013 27.2 1.4 81 149-275 21-101 (114)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=4.4e-62 Score=571.64 Aligned_cols=478 Identities=20% Similarity=0.202 Sum_probs=359.0
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++++||+++++|+||++++||||||||||+|+|+|.++++++..+...... ..+..
T Consensus 362 ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~-------------~~~~~--------- 419 (1034)
T 3ixz_A 362 ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTE-------------DQSGQ--------- 419 (1034)
T ss_pred hhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcc-------------ccccc---------
Confidence 46789999999999999999999999999999999999999987655421100 00000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.........+.++.++++||++......... ..... ...++|+|.|+++++...+...
T Consensus 420 ----~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~---------~~~~~-~~~gdp~e~All~~~~~~~~~~-------- 477 (1034)
T 3ixz_A 420 ----TFDQSSETWRALCRVLTLCNRAAFKSGQDAV---------PVPKR-IVIGDASETALLKFSELTLGNA-------- 477 (1034)
T ss_pred ----ccCcCCHHHHHHHHHHHHhccceeccCcCCC---------cccCc-eeccCchHHHHHHHHHHhCCCh--------
Confidence 0011223456788999999988764332110 00112 2335999999999998876432
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCC---CcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHH
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPD---NSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLS 253 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~---~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~ 253 (658)
.+...+++++..+||+|+||||+++++..+ +.+.+|+|||||.|+++|+... ..++..++.+.+.++
T Consensus 478 ----~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~ 553 (1034)
T 3ixz_A 478 ----MGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYL 553 (1034)
T ss_pred ----HHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHH
Confidence 123346788899999999999999887643 6789999999999999998532 245677888999999
Q ss_pred HHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhc
Q 041225 254 EYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQA 333 (658)
Q Consensus 254 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~ 333 (658)
.++.+|+||+++|+|.++.+++..+..... ....+.+.|++|+|.++++|+++++++++|++|+++
T Consensus 554 ~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~--------------~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~a 619 (1034)
T 3ixz_A 554 SLGGLGERVLGFCQLYLSEKDYPPGYAFDV--------------EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTA 619 (1034)
T ss_pred HHHhcCcHhheEeEEecChhhcccccccch--------------hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHc
Confidence 999999999999999998776543221100 112345789999999999999999999999999999
Q ss_pred CCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhc
Q 041225 334 GIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISN 413 (658)
Q Consensus 334 GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (658)
||+++|+|||++.+|.++|+++|+...+.. .+.++ ... ......
T Consensus 620 GI~vvmiTGd~~~tA~~ia~~lgi~~~~~~----------~i~~~---~~~-~~~~~~---------------------- 663 (1034)
T 3ixz_A 620 GIRVIMVTGDHPITAKAIAASVGIISEGSE----------TVEDI---AAR-LRVPVD---------------------- 663 (1034)
T ss_pred CCeEEEEeCCCHHHHHHHHHHcCCCCCCch----------HHHHH---HHh-hCccch----------------------
Confidence 999999999999999999999999764321 11111 110 000000
Q ss_pred CCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEE
Q 041225 414 DAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLA 493 (658)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~a 493 (658)
. .........+.++..+.....+ .+.......+..++++.+|.+|..+++.+++. +..|+|
T Consensus 664 -----~---------~~~~~~~~~~~~g~~l~~~~~~----~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a 724 (1034)
T 3ixz_A 664 -----Q---------VNRKDARACVINGMQLKDMDPS----ELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAV 724 (1034)
T ss_pred -----h---------ccccccceeEEecHhhhhCCHH----HHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-CCEEEE
Confidence 0 0000111233444443332222 22233334445689999999999999999998 689999
Q ss_pred EcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 494 IGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYI 572 (658)
Q Consensus 494 iGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 572 (658)
||||.||++||+.||+||||++++.+.+|++||+|+.++++...+.++ |||.+|+|+++++.|.+++|+..+++.+++.
T Consensus 725 ~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~ 804 (1034)
T 3ixz_A 725 TGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYI 804 (1034)
T ss_pred ECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999995488888999999999999999999888 9999999999999999999999999999888
Q ss_pred HhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccc
Q 041225 573 LFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622 (658)
Q Consensus 573 ~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y 622 (658)
++ ..+.|+.+++++|+|++++.+|+++++... .+++.+.+.|.-.
T Consensus 805 ~~---~~~~pl~~~qiL~inl~~d~~palal~~e~--~~~~~m~~~Pr~~ 849 (1034)
T 3ixz_A 805 TV---SVPLPLGCITILFIELCTDIFPSVSLAYEK--AESDIMHLRPRNP 849 (1034)
T ss_pred HH---hhhhhHHHHHHHHHHHHHHHHHHHHhhcCC--CChhhhhCCCCCC
Confidence 87 456799999999999999999999997532 3444544556443
No 2
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=2.5e-60 Score=556.30 Aligned_cols=479 Identities=23% Similarity=0.254 Sum_probs=345.4
Q ss_pred CCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHHH
Q 041225 24 GSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELL 103 (658)
Q Consensus 24 ~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (658)
+++++||+++++|+||++++||||||||||+|+|+|.++++.+..++...... ... .....+.+.+....+.
T Consensus 329 ~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~-~~~-~~~~~~~p~~~~~~~~------ 400 (995)
T 3ar4_A 329 KKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLN-EFS-ITGSTYAPEGEVLKND------ 400 (995)
T ss_dssp HTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEE-EEE-ECCSSSSSCCCEEETT------
T ss_pred cCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccc-eee-ccCCCcCCcccccccc------
Confidence 46899999999999999999999999999999999999988653322100000 000 0000000100000000
Q ss_pred hhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEE
Q 041225 104 SKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIV 183 (658)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~ 183 (658)
........+...+++.++++||++.+...+ ..+.+.. .++|+|.||+.++++.|+ +...... +.
T Consensus 401 -~~~~~~~~~~~~~l~~~~alc~~~~~~~~~------------~~~~~~~-~g~p~E~Al~~~a~~~g~-~~~~~~~-i~ 464 (995)
T 3ar4_A 401 -KPIRSGQFDGLVELATICALCNDSSLDFNE------------TKGVYEK-VGEATETALTTLVEKMNV-FNTEVRN-LS 464 (995)
T ss_dssp -EECCGGGCHHHHHHHHHHHHSCCCEEEEET------------TTTEEEE-ESCHHHHHHHHHHHHHCT-TCCCCTT-SC
T ss_pred -ccccccccHHHHHHHHHHHHcCCCcccccC------------CCCceee-cCCccHHHHHHHHHHcCC-ccccccc-cc
Confidence 001112234567788999999987653211 0112222 359999999999999886 1110000 00
Q ss_pred EEe------CCcEEEEEEEEeeCCCCCCCeeEEEEEcCCC-----cEEEEEeCCchHhHHhhhcCc------cccHHHHH
Q 041225 184 IDI------NGEGLRLDVLGLHEFDSVRKRMSVVIRFPDN-----SVKVLVKGADSSMFNILAKDS------KRNDLIRH 246 (658)
Q Consensus 184 ~~~------~g~~~~~~il~~~~F~s~rk~msviv~~~~~-----~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~ 246 (658)
... .+....+++++.+||+|+||||||+++.+++ .+.+|+|||||.|+++|++.. ..++..++
T Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~ 544 (995)
T 3ar4_A 465 KVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKE 544 (995)
T ss_dssp TTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHH
T ss_pred cccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHH
Confidence 000 0012458999999999999999999998776 689999999999999997542 23456678
Q ss_pred HHHHHHHHH--hhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChH
Q 041225 247 ITQSHLSEY--SSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVP 324 (658)
Q Consensus 247 ~~~~~~~~~--~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~ 324 (658)
.+.++++++ +.+|+||+++|||.++..+. .....+ ......+|.|++|+|.++++|+++++++
T Consensus 545 ~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~----------~~~~~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~ 609 (995)
T 3ar4_A 545 KILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMVLDD-----SSRFMEYETDLTFVGVVGMLDPPRKEVM 609 (995)
T ss_dssp HHHHHHHHHHHSTTCCEEEEEEEESSCCCGG----------GCCTTC-----GGGHHHHTCSEEEEEEEEEECCBCTTHH
T ss_pred HHHHHHHHHHhhhccceEEEEEEEecCcccc----------cccccc-----chhhhhhccCcEEEEEEeecCCCchhHH
Confidence 889999999 99999999999999854210 000000 0123456889999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchh
Q 041225 325 EAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSA 404 (658)
Q Consensus 325 ~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (658)
++|+.|+++||+++|+|||+..+|..+|+++|+...+..+ .+
T Consensus 610 ~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i---~~----------------------------------- 651 (995)
T 3ar4_A 610 GSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV---AD----------------------------------- 651 (995)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCC---TT-----------------------------------
T ss_pred HHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcc---cc-----------------------------------
Confidence 9999999999999999999999999999999997542210 00
Q ss_pred HHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHH
Q 041225 405 EIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIK 484 (658)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~ 484 (658)
.+..|.++...-.+. ...++. ...++++.+|.+|+.+|+.++
T Consensus 652 --------------------------------~~~~g~~~~~l~~~~----~~~~~~--~~~v~~r~~P~~K~~~v~~l~ 693 (995)
T 3ar4_A 652 --------------------------------RAYTGREFDDLPLAE----QREACR--RACCFARVEPSHKSKIVEYLQ 693 (995)
T ss_dssp --------------------------------TEEEHHHHHTSCHHH----HHHHHH--HCCEEESCCSSHHHHHHHHHH
T ss_pred --------------------------------eEEEchhhhhCCHHH----HHHHHh--hCcEEEEeCHHHHHHHHHHHH
Confidence 001111110000000 111111 246899999999999999999
Q ss_pred hcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHH
Q 041225 485 SRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAV 563 (658)
Q Consensus 485 ~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~ 563 (658)
++ ++.|+|+|||.||++||+.||+|||| +++.+.++++||+++.++++.....++ |||++|.|+++++.|.+++|+.
T Consensus 694 ~~-g~~v~~~GDG~ND~~alk~Advgiam-g~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~ 771 (995)
T 3ar4_A 694 SY-DEITAMTGDGVNDAPALKKAEIGIAM-GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG 771 (995)
T ss_dssp TT-TCCEEEEECSGGGHHHHHHSTEEEEE-TTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HC-CCEEEEEcCCchhHHHHHHCCeEEEe-CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98 68999999999999999999999999 577777999999999998887777555 9999999999999999999999
Q ss_pred HHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccc
Q 041225 564 FVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVV 624 (658)
Q Consensus 564 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~ 624 (658)
.+++.+++.++ ..+.|+.+++++|+|++++.+|++++++++. +++.+.+.|..++.
T Consensus 772 ~~~~~~~~~~~---g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~--~~~~m~~~P~~~~~ 827 (995)
T 3ar4_A 772 EVVCIFLTAAL---GLPEALIPVQLLWVNLVTDGLPATALGFNPP--DLDIMDRPPRSPKE 827 (995)
T ss_dssp HHHHHHHHHHT---TCCCSSCHHHHHHHHHTTTHHHHHHHTTCCC--CTTGGGSCCCCTTC
T ss_pred HHHHHHHHHHH---cCcchHHHHHHHHHHHHHHHHHHHhhccCCC--ChhHHhCCCCCCcc
Confidence 98888888776 3457889999999999999999999987654 34566666765544
No 3
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=1.2e-59 Score=550.11 Aligned_cols=478 Identities=20% Similarity=0.229 Sum_probs=348.7
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.++++.+..+...... .....
T Consensus 357 ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~-------------~~~~~--------- 414 (1028)
T 2zxe_A 357 ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE-------------NQSGA--------- 414 (1028)
T ss_dssp HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCT-------------TCCSC---------
T ss_pred hhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCC-------------Ccccc---------
Confidence 35789999999999999999999999999999999999999887654211000 00000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.....+...++++.++++||++.+....+. +....... .++|+|.||++++...|...
T Consensus 415 ----~~~~~~~~~~~l~~~~alc~~~~~~~~~~~---------hp~~~~~~-~gdp~E~Al~~~a~~~~~~~-------- 472 (1028)
T 2zxe_A 415 ----AFDKTSATWSALSRIAALCNRAVFQAGQDN---------VPILKRSV-AGDASESALLKCIELCCGSV-------- 472 (1028)
T ss_dssp ----CCCSSCHHHHHHHHHHHHSCCCEECTTCTT---------SCGGGSCE-ESCHHHHHHHHHHHHHHSCH--------
T ss_pred ----ccccCCHHHHHHHHHHHhcCCCeeecCCCC---------Ccccccee-CCCchHHHHHHHHHHhCCCH--------
Confidence 001112345678899999999876432210 00112223 35999999999998763211
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcC---CCcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHH
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFP---DNSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLS 253 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~---~~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~ 253 (658)
.+....++++..+||+|.||||+++++.+ ++.+.+|+|||||.|+++|+... ..++..++.+.+.++
T Consensus 473 ----~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~ 548 (1028)
T 2zxe_A 473 ----QGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYL 548 (1028)
T ss_dssp ----HHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHH
T ss_pred ----HHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHH
Confidence 11122467788999999999999999975 57789999999999999997532 235667788999999
Q ss_pred HHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhc
Q 041225 254 EYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQA 333 (658)
Q Consensus 254 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~ 333 (658)
+++.+|+||+++|+|.++++++.++. .. ++ ......+.|++|+|.++++|+++++++++|++|+++
T Consensus 549 ~~a~~G~RvL~~A~~~l~~~~~~~~~--------~~-~~-----~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~a 614 (1028)
T 2zxe_A 549 ELGGLGERVLGFCHFALPEDKYNEGY--------PF-DA-----DEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSA 614 (1028)
T ss_dssp HHHHTTCEEEEEEEEECCSTTSCTTC--------CC-CT-----TTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHT
T ss_pred HHHhcCCEEEEEEEEecCcccccccc--------cc-ch-----hhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHc
Confidence 99999999999999998764321100 00 00 001124679999999999999999999999999999
Q ss_pred CCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhc
Q 041225 334 GIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISN 413 (658)
Q Consensus 334 GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (658)
||+++|+|||+..+|..+|+++|+...++..+ .+ ........
T Consensus 615 GI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i----------~~----~~~~~~~~------------------------ 656 (1028)
T 2zxe_A 615 GIKVIMVTGDHPITAKAIAKGVGIISEGNETI----------ED----IAARLNIP------------------------ 656 (1028)
T ss_dssp TCEEEEECSSCHHHHHHHHHHHTSSCTTCCCH----------HH----HHHHTTCC------------------------
T ss_pred CCEEEEECCCCHHHHHHHHHHcCCCCCCchhH----------HH----HHhhcCcc------------------------
Confidence 99999999999999999999999975543221 00 11100000
Q ss_pred CCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEE
Q 041225 414 DAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLA 493 (658)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~a 493 (658)
+... ........+++|.++.....+ .+..+...++..++++.+|.+|..+++.+++. ++.|+|
T Consensus 657 ---~~~~---------~~~~~~~~vi~G~~l~~~~~~----~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~ 719 (1028)
T 2zxe_A 657 ---IGQV---------NPRDAKACVVHGSDLKDLSTE----VLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAV 719 (1028)
T ss_dssp ---GGGS---------CGGGCCEEEEEHHHHTTCCHH----HHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEE
T ss_pred ---hhhc---------cccccceEEEEcHHhhhCCHH----HHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-CCEEEE
Confidence 0000 000011234444443222111 22223333445789999999999999999998 679999
Q ss_pred EcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 494 IGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYI 572 (658)
Q Consensus 494 iGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 572 (658)
+|||.||+|||+.||+||||+.++.+.+|++||+|+.+.++.....++ |||.+|.|+++++.|.++.|+..+++.+++.
T Consensus 720 iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~ 799 (1028)
T 2zxe_A 720 TGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFI 799 (1028)
T ss_dssp EECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred EcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999994367777999999999998887776655 9999999999999999999999988888877
Q ss_pred HhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccc
Q 041225 573 LFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622 (658)
Q Consensus 573 ~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y 622 (658)
++ ..+.++++++++|+|++++.+|+++++. +++ .++.+.+.|.-.
T Consensus 800 ~~---~~~~~l~~~qil~inl~~d~~pa~al~~-e~~-~~~~m~~~Pr~~ 844 (1028)
T 2zxe_A 800 IG---NVPLPLGTVTILCIDLGTDMVPAISLAY-EQA-ESDIMKRQPRNP 844 (1028)
T ss_dssp HH---CCCCSSCHHHHHHHHTTTTHHHHHHGGG-CCC-SSCGGGSCCCCT
T ss_pred HH---cccchhHHHHHHHHHHHHHHHHHHHhcc-Ccc-chhhhccCCCCc
Confidence 76 4467899999999999999999999974 442 445555556543
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=3.5e-56 Score=507.49 Aligned_cols=410 Identities=21% Similarity=0.264 Sum_probs=315.3
Q ss_pred CCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHHH
Q 041225 24 GSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELL 103 (658)
Q Consensus 24 ~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (658)
++|++||+++++|+||++++||||||||||+|+|+|.+++..+.. . +
T Consensus 355 k~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~-~--------------------------~------ 401 (920)
T 1mhs_A 355 KKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV-D--------------------------P------ 401 (920)
T ss_dssp HTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC-C--------------------------C------
T ss_pred hCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCC-C--------------------------H------
Confidence 568999999999999999999999999999999999987643210 0 0
Q ss_pred hhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEE
Q 041225 104 SKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIV 183 (658)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~ 183 (658)
.+++++.++|+... ..+.||+|.|+++++.+.+..
T Consensus 402 ------------~~ll~~a~l~~~~~-----------------------~~~~~P~e~Al~~~~~~~~~~---------- 436 (920)
T 1mhs_A 402 ------------EDLMLTACLAASRK-----------------------KKGIDAIDKAFLKSLKYYPRA---------- 436 (920)
T ss_dssp ------------THHHHHHHHSCCCS-----------------------SCSCCSHHHHHHHHHHHSSSC----------
T ss_pred ------------HHHHHHHHHhcCCc-----------------------ccCCChHHHHHHHHHHhcccc----------
Confidence 12456677886421 012399999999999876531
Q ss_pred EEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEE
Q 041225 184 IDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTL 263 (658)
Q Consensus 184 ~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l 263 (658)
.+....++++..+||+|.||||+++++.++|...+|+||||+.|+++|......++..++.+.+.+++++.+|+||+
T Consensus 437 ---~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL 513 (920)
T 1mhs_A 437 ---KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSL 513 (920)
T ss_dssp ---CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCC
T ss_pred ---hhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 01122467788999999999999999988888889999999999999986544566677888999999999999999
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 264 VVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 264 ~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
++|+|.. +.|++++|.++++|++||+++++|++|+++||+++|+|||
T Consensus 514 ~vA~~~~---------------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD 560 (920)
T 1mhs_A 514 GVARKRG---------------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGD 560 (920)
T ss_dssp EECCCSS---------------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEecc---------------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCC
Confidence 9999841 3478999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCC
Q 041225 344 KQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQG 423 (658)
Q Consensus 344 ~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (658)
+..+|..+|+++|+.... + +.. .... .+.
T Consensus 561 ~~~TA~aIA~~lGI~~~~---~--~~~----------------~~~~--~g~---------------------------- 589 (920)
T 1mhs_A 561 AVGIARETSRQLGLGTNI---Y--NAE----------------RLGL--GGG---------------------------- 589 (920)
T ss_dssp CHHHHHHHHHHHTSSCSC---C--CSS----------------SSSS--CBC----------------------------
T ss_pred CHHHHHHHHHHcCCCccc---c--Ccc----------------ceee--cCc----------------------------
Confidence 999999999999995320 0 000 0000 000
Q ss_pred CchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhh
Q 041225 424 HDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSM 503 (658)
Q Consensus 424 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~M 503 (658)
.. .+++ .+...+. ...++++++|.+|..+|+.|+++ ++.|+|+|||.||+||
T Consensus 590 ~~-------------~~~~------------el~~~~~--~~~V~arv~P~~K~~iV~~Lq~~-g~~Vam~GDGvNDapa 641 (920)
T 1mhs_A 590 GD-------------MPGS------------EVYDFVE--AADGFAEVFPQHKYNVVEILQQR-GYLVAMTGDGVNDAPS 641 (920)
T ss_dssp CC-------------GGGG------------GGGTTTT--TTSCEESCCSTHHHHHHHHHHTT-TCCCEECCCCGGGHHH
T ss_pred cc-------------CCHH------------HHHHHHh--hCeEEEEeCHHHHHHHHHHHHhC-CCeEEEEcCCcccHHH
Confidence 00 0000 0111111 13478999999999999999998 6899999999999999
Q ss_pred hhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 041225 504 IQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSA 582 (658)
Q Consensus 504 l~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 582 (658)
|+.||+|||| +++.+.++++||+++.+.++.....++ +||.+|+|+++++.|.++.|+.+.+..+++..+.+++
T Consensus 642 Lk~AdvGIAm-g~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~---- 716 (920)
T 1mhs_A 642 LKKADTGIAV-EGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRS---- 716 (920)
T ss_dssp HHHSSEEEEE-TTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCC----
T ss_pred HHhCCcCccc-ccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 9999999999 567777999999999999988777666 9999999999999999999998754444444443332
Q ss_pred hhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccccchHHHHHHHH
Q 041225 583 LTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLWPSDIQIAR 637 (658)
Q Consensus 583 ~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~ 637 (658)
+++.+++|.|++.+. |+++++....+.+ +.|..+......|..+++-+.
T Consensus 717 l~~~~il~~~l~~d~-~~lal~~e~~~~~-----~~P~~~~~~~~~~~~~~~g~~ 765 (920)
T 1mhs_A 717 LNIELVVFIAIFADV-ATLAIAYDNAPYS-----QTPVKWNLPKLWGMSVLLGVV 765 (920)
T ss_dssp CCHHHHHHHHHHHTT-HHHHCCCCCSGGG-----GSCCCCCSSSCSSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-HhhhhcccCcccc-----cCCCCchHHHHHHHHHHHHHH
Confidence 677888888888776 9999987654322 456666656666655544333
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=5e-54 Score=490.40 Aligned_cols=409 Identities=18% Similarity=0.228 Sum_probs=304.2
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.++.+. .++..
T Consensus 305 ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~~------------------------------ 352 (885)
T 3b8c_A 305 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCKG------------------------------ 352 (885)
T ss_dssp TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCSS------------------------------
T ss_pred HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCCC------------------------------
Confidence 5788999999999999999999999999999999999743211 01000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
....+++...++|+... ++||+|.|+++++.+..
T Consensus 353 ----------~~~~~ll~~aa~~~~~~-------------------------~~~p~~~Al~~~~~~~~----------- 386 (885)
T 3b8c_A 353 ----------VEKDQVLLFAAMASRVE-------------------------NQDAIDAAMVGMLADPK----------- 386 (885)
T ss_dssp ----------TTHHHHHHHHHHHCCSS-------------------------SCCSHHHHHHHTTCCTT-----------
T ss_pred ----------CCHHHHHHHHHHHhCCC-------------------------CCCchHHHHHHHhhchh-----------
Confidence 01124566778887421 35999999999864210
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeE
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRT 262 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 262 (658)
.....+++++.+||+|.||||+++++..+|...+|+||||+.|+++|+... ..++.+.+.+++++.+|+||
T Consensus 387 -----~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~----~~~~~~~~~~~~~a~~G~rv 457 (885)
T 3b8c_A 387 -----EARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASN----DLSKKVLSIIDKYAERGLRS 457 (885)
T ss_dssp -----CCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCS----TTTTTHHHHHHHHTTTTCEE
T ss_pred -----hHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCch----hhHHHHHHHHHHHHhCCCeE
Confidence 011235677889999999999999998788888999999999999997422 23445677889999999999
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec
Q 041225 263 LVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 263 l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
+++|++.+++++. ...+.|++++|.++++|++||+++++|++|+++||+++|+||
T Consensus 458 l~vA~~~~~~~~~-------------------------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTG 512 (885)
T 3b8c_A 458 LAVARQVVPEKTK-------------------------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITG 512 (885)
T ss_dssp EEECCBCCCSSSS-------------------------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEES
T ss_pred EEEEEeccccccc-------------------------cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcC
Confidence 9999998865320 123568999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHcCccCCC--ccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCC
Q 041225 343 DKQDTAISIALSCKLLTPD--MQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV 420 (658)
Q Consensus 343 r~~~~a~~ia~~~gl~~~~--~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (658)
|+..+|..+|+++|+.... ...+ .|
T Consensus 513 D~~~tA~~iA~~lGi~~~~~~~~~l--~g--------------------------------------------------- 539 (885)
T 3b8c_A 513 DQLAIGKETGRRLGMGTNMYPSSAL--LG--------------------------------------------------- 539 (885)
T ss_dssp SCHHHHTHHHHTTTCTTCCSTTSSC--CB---------------------------------------------------
T ss_pred CChHHHHHHHHHhCCccccCCccee--ec---------------------------------------------------
Confidence 9999999999999995320 0000 00
Q ss_pred CCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 041225 421 PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500 (658)
Q Consensus 421 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ND 500 (658)
.+ .+.. .++.++...+. ...++++++|.+|..+|+.++++ ++.|+|+|||.||
T Consensus 540 ---~~---~~~~------~~~~~l~~~~~--------------~~~v~arv~P~~K~~iV~~lq~~-g~~Vam~GDGvND 592 (885)
T 3b8c_A 540 ---TH---KDAN------LASIPVEELIE--------------KADGFAGVFPEHKYEIVKKLQER-KHIVGMTGDGVND 592 (885)
T ss_dssp ---GG---GGTT------SCCSCHHHHHH--------------TSCCEECCCHHHHHHHHHHHHHT-TCCCCBCCCSSTT
T ss_pred ---cc---cccc------cchhHHHHHHh--------------hCcEEEEECHHHHHHHHHHHHHC-CCeEEEEcCCchh
Confidence 00 0000 00111111111 13478999999999999999998 6899999999999
Q ss_pred hhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 041225 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFST 579 (658)
Q Consensus 501 i~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~ 579 (658)
+|||+.||+|||| +++.+.++++||+++.++++.....++ +||.+|+|+++++.|.+..|+..++..++..+ ++
T Consensus 593 apaLk~AdvGIAm-g~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~-- 667 (885)
T 3b8c_A 593 APALKKADIGIAV-ADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL--IW-- 667 (885)
T ss_dssp HHHHHHSSSCCCC-SSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SC--
T ss_pred HHHHHhCCEeEEe-CCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cc--
Confidence 9999999999999 567777999999999999988777666 99999999999999999999865544444333 22
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccccchHHHHH
Q 041225 580 TSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLWPSDIQ 634 (658)
Q Consensus 580 ~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~ 634 (658)
+.++++++++|+|++.+..+ +.++. +...+ .+.|.-+......|...+.
T Consensus 668 ~~~l~p~~il~i~l~~d~~~-l~l~~-~~~~~----~~~p~~~~~~~~~~~~~~~ 716 (885)
T 3b8c_A 668 EFDFSAFMVLIIAILNDGTI-MTISK-DRVKP----SPTPDSWKLKEIFATGVVL 716 (885)
T ss_dssp SSCSCHHHHHHHHHHHHTTT-CCCCC-CCCCC----SSCCCSTTTTTTTTTHHHH
T ss_pred CcCcCHHHHHHHHHHHHHHH-Hhhcc-cccCc----ccCCcchhHHHHHHHHHHH
Confidence 34788999999999988775 66653 22211 1345444444444444443
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.2e-40 Score=373.12 Aligned_cols=292 Identities=23% Similarity=0.285 Sum_probs=236.5
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++||+||+++++|+||++++||||||||||+|+|.|.+++..+.. +
T Consensus 402 a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~----------------------------~----- 448 (736)
T 3rfu_A 402 AQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV----------------------------E----- 448 (736)
T ss_dssp HHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSSC----------------------------H-----
T ss_pred hhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCCC----------------------------H-----
Confidence 3578999999999999999999999999999999999999843311 0
Q ss_pred HhhccCcchhHHHHHHH-HHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 103 LSKDLVGDERIAAHEFF-LTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~-~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
.+++ .+.+ ++..++||++.|++++++..|+.+.
T Consensus 449 -------------~~~l~~aa~---------------------------le~~s~hPla~Aiv~~a~~~~~~~~------ 482 (736)
T 3rfu_A 449 -------------DNALALAAA---------------------------LEHQSEHPLANAIVHAAKEKGLSLG------ 482 (736)
T ss_dssp -------------HHHHHHHHH---------------------------HHHSSCCHHHHHHHHHHHTTCCCCC------
T ss_pred -------------HHHHHHHHH---------------------------HhhcCCChHHHHHHHHHHhcCCCcc------
Confidence 0111 1222 2334569999999999998775432
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
...+|++.+++. +.... ++. .+.+|+++.+.+.... ...+.+..++++.+|.|
T Consensus 483 ---------------~~~~f~~~~g~g-v~~~~-~g~--~~~~G~~~~~~~~~~~--------~~~~~~~~~~~~~~G~~ 535 (736)
T 3rfu_A 483 ---------------SVEAFEAPTGKG-VVGQV-DGH--HVAIGNARLMQEHGGD--------NAPLFEKADELRGKGAS 535 (736)
T ss_dssp ---------------CCSCCCCCTTTE-EEECS-SSS--CEEEESHHHHHHHCCC--------CHHHHHHHHHHHHTTCE
T ss_pred ---------------CcccccccCCce-EEEEE-CCE--EEEEcCHHHHHHcCCC--------hhHHHHHHHHHHhcCCe
Confidence 234677666543 22222 222 2456998877654322 12345667889999999
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT 341 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T 341 (658)
++++|+ |++++|.++++|+++++++++|++|+++|++++|+|
T Consensus 536 vl~va~--------------------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlT 577 (736)
T 3rfu_A 536 VMFMAV--------------------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLT 577 (736)
T ss_dssp EEEEEE--------------------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEEC
T ss_pred EEEEEE--------------------------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEEC
Confidence 999984 579999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCC
Q 041225 342 GDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVP 421 (658)
Q Consensus 342 Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (658)
||+..++..+++++|+.
T Consensus 578 Gd~~~~a~~ia~~lgi~--------------------------------------------------------------- 594 (736)
T 3rfu_A 578 GDSKRTAEAVAGTLGIK--------------------------------------------------------------- 594 (736)
T ss_dssp SSCHHHHHHHHHHHTCC---------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHcCCC---------------------------------------------------------------
Confidence 99999999999999972
Q ss_pred CCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 041225 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV 501 (658)
Q Consensus 422 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi 501 (658)
.++++..|.+|...++.+++. +..|+|+|||.||+
T Consensus 595 --------------------------------------------~v~a~~~P~~K~~~v~~l~~~-g~~V~~vGDG~ND~ 629 (736)
T 3rfu_A 595 --------------------------------------------KVVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDA 629 (736)
T ss_dssp --------------------------------------------CEECSCCHHHHHHHHHHHHHH-SCCEEEEECSSTTH
T ss_pred --------------------------------------------EEEEecCHHHHHHHHHHHHhc-CCEEEEEECChHhH
Confidence 146677899999999999998 67899999999999
Q ss_pred hhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041225 502 SMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLM 567 (658)
Q Consensus 502 ~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~ 567 (658)
|||+.||+|||| +++.+.++++||+++.+.++.....++ +||..++++++.+.|.+.+|++.+.+
T Consensus 630 paL~~AdvGIAm-g~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~ipl 695 (736)
T 3rfu_A 630 PALAKADIGIAM-GTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPL 695 (736)
T ss_dssp HHHHHSSEEEEE-SSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEEe-CCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 678888999999999988888777666 89999999999999999999976544
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=9.7e-40 Score=368.76 Aligned_cols=289 Identities=22% Similarity=0.304 Sum_probs=232.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..
T Consensus 386 a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~---------------------------------- 431 (723)
T 3j09_A 386 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD---------------------------------- 431 (723)
T ss_dssp HTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC----------------------------------
T ss_pred HHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC----------------------------------
Confidence 4678999999999999999999999999999999999999876421
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
..+++...+.| +..+.||++.|+++++...|+.+....+
T Consensus 432 ------------~~~~l~~aa~~--------------------------e~~s~hP~~~Ai~~~a~~~~~~~~~~~~--- 470 (723)
T 3j09_A 432 ------------ERELLRLAAIA--------------------------ERRSEHPIAEAIVKKALEHGIELGEPEK--- 470 (723)
T ss_dssp ------------HHHHHHHHHHH--------------------------HTTCCSHHHHHHHHHHHHTTCCCCSCCC---
T ss_pred ------------HHHHHHHHHHH--------------------------hccCCCchhHHHHHHHHhcCCCcCCccc---
Confidence 01222333332 2234699999999999998875432221
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeE
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRT 262 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 262 (658)
+..+.|.+... ..+..|+++.+.+.... ..+.+...++.++.+|.|+
T Consensus 471 ~~~~~g~g~~~--------------------------~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~ 517 (723)
T 3j09_A 471 VEVIAGEGVVA--------------------------DGILVGNKRLMEDFGVA-------VSNEVELALEKLEREAKTA 517 (723)
T ss_dssp CEEETTTEEEE--------------------------TTEEEECHHHHHHTTCC-------CCHHHHHHHHHHHTTTCEE
T ss_pred eEEecCCceEE--------------------------EEEEECCHHHHHhcCCC-------ccHHHHHHHHHHHhcCCeE
Confidence 22333443221 12456777665443221 1245667788999999999
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec
Q 041225 263 LVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 263 l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
+++++ |++++|.++++|+++++++++|++|+++|++++|+||
T Consensus 518 ~~va~--------------------------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TG 559 (723)
T 3j09_A 518 VIVAR--------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITG 559 (723)
T ss_dssp EEEEE--------------------------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEE--------------------------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECC
Confidence 99985 5799999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCC
Q 041225 343 DKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQ 422 (658)
Q Consensus 343 r~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (658)
|+..++..+++++|+.
T Consensus 560 d~~~~a~~ia~~lgi~---------------------------------------------------------------- 575 (723)
T 3j09_A 560 DNWRSAEAISRELNLD---------------------------------------------------------------- 575 (723)
T ss_dssp SCHHHHHHHHHHHTCS----------------------------------------------------------------
T ss_pred CCHHHHHHHHHHcCCc----------------------------------------------------------------
Confidence 9999999999999972
Q ss_pred CCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 041225 423 GHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVS 502 (658)
Q Consensus 423 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~ 502 (658)
.++++..|.+|+.+++.++++ +.|+|+|||.||+|
T Consensus 576 -------------------------------------------~~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~ 610 (723)
T 3j09_A 576 -------------------------------------------LVIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAP 610 (723)
T ss_dssp -------------------------------------------EEECSCCTTCHHHHHHHHTTT--CCEEEEECSSTTHH
T ss_pred -------------------------------------------EEEccCCHHHHHHHHHHHhcC--CeEEEEECChhhHH
Confidence 256778899999999999986 78999999999999
Q ss_pred hhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041225 503 MIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLM 567 (658)
Q Consensus 503 Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~ 567 (658)
||+.||+|||| +++.+.++++||+++.+.++.....++ +||..++++++.+.|.+.+|++.+.+
T Consensus 611 al~~A~vgiam-g~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 675 (723)
T 3j09_A 611 ALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPA 675 (723)
T ss_dssp HHHHSSEEEEC-CCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCEEEEe-CCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 577778999999999888887777665 89999999999999999999985443
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.4e-39 Score=362.50 Aligned_cols=289 Identities=22% Similarity=0.302 Sum_probs=232.3
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..
T Consensus 308 a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~---------------------------------- 353 (645)
T 3j08_A 308 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD---------------------------------- 353 (645)
T ss_dssp HTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC----------------------------------
T ss_pred HHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC----------------------------------
Confidence 4679999999999999999999999999999999999999876421
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
..+++...+.|. ..+.||++.|+++++...|+......+
T Consensus 354 ------------~~~~l~~aa~~e--------------------------~~s~hPla~Aiv~~a~~~g~~~~~~~~--- 392 (645)
T 3j08_A 354 ------------ERELLRLAAIAE--------------------------RRSEHPIAEAIVKKALEHGIELGEPEK--- 392 (645)
T ss_dssp ------------HHHHHHHHHHHH--------------------------TTCCSHHHHHHHHHHHHTTCCCCSCCC---
T ss_pred ------------HHHHHHHHHHHh--------------------------hcCCChhHHHHHHHHHhcCCCcCCccc---
Confidence 012233333332 234699999999999998875432221
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeE
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRT 262 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 262 (658)
+....|.+... ..+..|+++.+.+.... ..+.+...++.++.+|.|+
T Consensus 393 ~~~~~g~g~~~--------------------------~~v~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~ 439 (645)
T 3j08_A 393 VEVIAGEGVVA--------------------------DGILVGNKRLMEDFGVA-------VSNEVELALEKLEREAKTA 439 (645)
T ss_dssp CEEETTTEEEE--------------------------TTEEEECHHHHHHTTCC-------CCHHHHHHHHHHHTTTCCC
T ss_pred eEEecCCceEE--------------------------EEEEECCHHHHHhcCCC-------ccHHHHHHHHHHHhcCCeE
Confidence 22333433221 12456776655432221 1245667788899999999
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec
Q 041225 263 LVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 263 l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
+++++ |++++|.++++|+++++++++|++|+++|++++|+||
T Consensus 440 l~va~--------------------------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TG 481 (645)
T 3j08_A 440 VIVAR--------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITG 481 (645)
T ss_dssp EEEEE--------------------------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEE--------------------------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeC
Confidence 99985 5789999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCC
Q 041225 343 DKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQ 422 (658)
Q Consensus 343 r~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (658)
|+..++..+++++|+.
T Consensus 482 d~~~~a~~ia~~lgi~---------------------------------------------------------------- 497 (645)
T 3j08_A 482 DNWRSAEAISRELNLD---------------------------------------------------------------- 497 (645)
T ss_dssp SCHHHHHHHHHHHTCS----------------------------------------------------------------
T ss_pred CCHHHHHHHHHHcCCC----------------------------------------------------------------
Confidence 9999999999999972
Q ss_pred CCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 041225 423 GHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVS 502 (658)
Q Consensus 423 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~ 502 (658)
.++++..|.+|+.+++.++++ +.|+|+|||.||++
T Consensus 498 -------------------------------------------~~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~ 532 (645)
T 3j08_A 498 -------------------------------------------LVIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAP 532 (645)
T ss_dssp -------------------------------------------EEECSCCTTCHHHHHHHHTTT--CCEEEEECSSSCHH
T ss_pred -------------------------------------------EEEEeCCHHhHHHHHHHHhhC--CeEEEEeCCHhHHH
Confidence 256777899999999999987 78999999999999
Q ss_pred hhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041225 503 MIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLM 567 (658)
Q Consensus 503 Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~ 567 (658)
||+.||+|||| +++.+.++++||+++.+.++.....++ +||..++++++.+.|.+.+|++.+.+
T Consensus 533 al~~A~vgiam-g~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 533 ALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp HHHHSSEEEEE-CCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCEEEEe-CCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 577778999999999888877776655 89999999999999999999985443
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.87 E-value=2.2e-27 Score=236.66 Aligned_cols=142 Identities=22% Similarity=0.325 Sum_probs=112.4
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHH
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLAD 381 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~ 381 (658)
+...++.+++.+.+.+++.|++.++|+.|+++|++++|+||++...+..+++.+|+...
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~--------------------- 178 (263)
T 2yj3_A 120 AVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEY--------------------- 178 (263)
Confidence 44567788888888999999999999999999999999999999999999998886211
Q ss_pred HHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhc
Q 041225 382 AKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLAT 461 (658)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 461 (658)
T Consensus 179 -------------------------------------------------------------------------------- 178 (263)
T 2yj3_A 179 -------------------------------------------------------------------------------- 178 (263)
Confidence
Q ss_pred cCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh
Q 041225 462 SCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV 541 (658)
Q Consensus 462 s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~ 541 (658)
+....|..|..+++.+... ++++++||||.||++|++.||+||++ ++....++..||+++.+.++...+.++
T Consensus 179 ------f~~~~p~~k~~~~~~l~~~-~~~~~~VGD~~~D~~aa~~Agv~va~-g~~~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 179 ------YSNLSPEDKVRIIEKLKQN-GNKVLMIGDGVNDAAALALADVSVAM-GNGVDISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 1112266788888888776 57899999999999999999999999 455556788899999444443333333
Q ss_pred -hhhhHHHHHHH
Q 041225 542 -HGHWNYQRIGY 552 (658)
Q Consensus 542 -~gr~~~~~~~~ 552 (658)
.+|..+++++.
T Consensus 251 ~~~r~~~~~i~~ 262 (263)
T 2yj3_A 251 KNRKRLSNAIPS 262 (263)
Confidence 68887777654
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.91 E-value=1.2e-23 Score=212.78 Aligned_cols=274 Identities=23% Similarity=0.283 Sum_probs=185.0
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
..++||++|+++++|+|+++++||||||||||.+.+.+..++..+. . .
T Consensus 13 ~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~-~----------------------------- 60 (287)
T 3a1c_A 13 GAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D-E----------------------------- 60 (287)
T ss_dssp -CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C-H-----------------------------
T ss_pred HHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C-H-----------------------------
Confidence 4578999999999999999999999999999999999998876542 0 0
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
.+++. +|.. ++..+.||.+.|+.++++..|+.......
T Consensus 61 --------------~~~l~---~~~~-----------------------~e~~s~hp~~~a~~~~~~~~g~~~~~~~~-- 98 (287)
T 3a1c_A 61 --------------RELLR---LAAI-----------------------AERRSEHPIAEAIVKKALEHGIELGEPEK-- 98 (287)
T ss_dssp --------------HHHHH---HHHH-----------------------HTTTCCSHHHHHHHHHHHHTTCCCCCCSC--
T ss_pred --------------HHHHH---HHHH-----------------------HhhcCCCHHHHHHHHHHHhcCCCcccccc--
Confidence 01111 1211 11234699999999999998875321111
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
+....|.+... ..+.+|.++.+.+..... .+.+....+.+..+|.+
T Consensus 99 -~~~~~G~~~~~--------------------------~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~ 144 (287)
T 3a1c_A 99 -VEVIAGEGVVA--------------------------DGILVGNKRLMEDFGVAV-------SNEVELALEKLEREAKT 144 (287)
T ss_dssp -EEEETTTEEEE--------------------------TTEEEECHHHHHHTTCCC-------CHHHHHHHHHHHHTTCE
T ss_pred -ceeecCCCeEE--------------------------EEEEECCHHHHHhcCCCc-------cHHHHHHHHHHHhCCCe
Confidence 22333433211 012345443322111100 01234445667778888
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT 341 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T 341 (658)
++.++ .|+++++......++.|++.++|+.|+++|++++++|
T Consensus 145 ~i~~~--------------------------------------~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T 186 (287)
T 3a1c_A 145 AVIVA--------------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT 186 (287)
T ss_dssp EEEEE--------------------------------------ETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEE--------------------------------------ECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEe
Confidence 87766 4577888776678999999999999999999999999
Q ss_pred cCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCC
Q 041225 342 GDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVP 421 (658)
Q Consensus 342 Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (658)
|++...+..+++.+|+...
T Consensus 187 ~~~~~~~~~~l~~~gl~~~------------------------------------------------------------- 205 (287)
T 3a1c_A 187 GDNWRSAEAISRELNLDLV------------------------------------------------------------- 205 (287)
T ss_dssp SSCHHHHHHHHHHHTCSEE-------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHhCCcee-------------------------------------------------------------
Confidence 9999999999988886210
Q ss_pred CCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 041225 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV 501 (658)
Q Consensus 422 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi 501 (658)
+....|..|..+++.+... +++++|||+.||+
T Consensus 206 ----------------------------------------------f~~i~~~~K~~~~~~l~~~--~~~~~vGDs~~Di 237 (287)
T 3a1c_A 206 ----------------------------------------------IAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDA 237 (287)
T ss_dssp ----------------------------------------------ECSCCTTCHHHHHHHHTTT--CCEEEEECTTTCH
T ss_pred ----------------------------------------------eeecChHHHHHHHHHHhcC--CeEEEEECCHHHH
Confidence 1112256898888888765 7899999999999
Q ss_pred hhhhhcceeEEecCccchhhhhhcccccccccchHHHH-hhhhhhHHHHHH
Q 041225 502 SMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLL-LVHGHWNYQRIG 551 (658)
Q Consensus 502 ~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~-l~~gr~~~~~~~ 551 (658)
+|.+.||++|++ ++.....+..||+++.+.++...+- +..+|..+.+++
T Consensus 238 ~~a~~ag~~v~~-~~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 238 PALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHHHHSSEEEEE-CCCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHHHCCeeEEe-CCCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 999999999999 4444456778999994333333332 347888777653
No 11
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.88 E-value=9.4e-22 Score=198.23 Aligned_cols=275 Identities=24% Similarity=0.292 Sum_probs=181.4
Q ss_pred eccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHHHhhccC
Q 041225 29 CRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELLSKDLV 108 (658)
Q Consensus 29 vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (658)
+|++.++|.|++++.||||+|||||.|+|.|.++...+. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~--~-------------------------------------- 40 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH--S-------------------------------------- 40 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS--C--------------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC--C--------------------------------------
Confidence 589999999999999999999999999999999876543 1
Q ss_pred cchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCC
Q 041225 109 GDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDING 188 (658)
Q Consensus 109 ~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g 188 (658)
..+++..++.+ +..+.+|...++.+++...|+.... ........|
T Consensus 41 ------~~~~~~~~~~~--------------------------~~~s~~~~~~a~~~~~~~~g~~~~~---~~~~~~~~g 85 (280)
T 3skx_A 41 ------EDELLQIAASL--------------------------EARSEHPIAAAIVEEAEKRGFGLTE---VEEFRAIPG 85 (280)
T ss_dssp ------HHHHHHHHHHH--------------------------HTTCCSHHHHHHHHHHHHTTCCCCC---CEEEEEETT
T ss_pred ------HHHHHHHHHHh--------------------------hccCCCHHHHHHHHHHHhcCCCCCC---ccceeecCC
Confidence 01122222221 1223588999999999998865321 112233344
Q ss_pred cEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEe
Q 041225 189 EGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASR 268 (658)
Q Consensus 189 ~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k 268 (658)
.+....+ ++ ..+..|.++.+........ .....+...|.+++..+
T Consensus 86 ~~~~~~~--------------------~~--~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-- 130 (280)
T 3skx_A 86 KGVEGIV--------------------NG--RRYMVVSPGYIRELGIKTD-----------ESVEKLKQQGKTVVFIL-- 130 (280)
T ss_dssp TEEEEEE--------------------TT--EEEEEECHHHHHHTTCCCC-----------TTHHHHHTTTCEEEEEE--
T ss_pred CEEEEEE--------------------CC--EEEEEecHHHHHHcCCCch-----------HHHHHHHhCCCeEEEEE--
Confidence 4332211 11 1122344444433222111 12334556677766555
Q ss_pred cCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHH
Q 041225 269 DLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTA 348 (658)
Q Consensus 269 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a 348 (658)
.++.+++...+.+++.|++.++++.|+++|++++++||++...+
T Consensus 131 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~ 174 (280)
T 3skx_A 131 ------------------------------------KNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVA 174 (280)
T ss_dssp ------------------------------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred ------------------------------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence 35678888888889999999999999999999999999999999
Q ss_pred HHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhh
Q 041225 349 ISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKE 428 (658)
Q Consensus 349 ~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (658)
..+++.+|+..
T Consensus 175 ~~~~~~~gl~~--------------------------------------------------------------------- 185 (280)
T 3skx_A 175 KWVAEELGLDD--------------------------------------------------------------------- 185 (280)
T ss_dssp HHHHHHHTCSE---------------------------------------------------------------------
T ss_pred HHHHHHcCChh---------------------------------------------------------------------
Confidence 99999888721
Q ss_pred hhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcc
Q 041225 429 VAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMAD 508 (658)
Q Consensus 429 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~ 508 (658)
.+....+.+|+..++.+.+. .++++||||.||++|++.||
T Consensus 186 --------------------------------------~f~~~~~~~k~~~~k~~~~~--~~~~~vGD~~nDi~~~~~Ag 225 (280)
T 3skx_A 186 --------------------------------------YFAEVLPHEKAEKVKEVQQK--YVTAMVGDGVNDAPALAQAD 225 (280)
T ss_dssp --------------------------------------EECSCCGGGHHHHHHHHHTT--SCEEEEECTTTTHHHHHHSS
T ss_pred --------------------------------------HhHhcCHHHHHHHHHHHHhc--CCEEEEeCCchhHHHHHhCC
Confidence 12233456899999999886 47899999999999999999
Q ss_pred eeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHH
Q 041225 509 VGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFY 559 (658)
Q Consensus 509 vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~ 559 (658)
+||+| +++...++..||+++...+......++ .+|..+.+++..+.|++.
T Consensus 226 ~~va~-~~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 226 VGIAI-GAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp EEEEC-SCCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred ceEEe-cCCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 666667889999998655554444444 678877777777666653
No 12
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=99.86 E-value=2.6e-22 Score=202.40 Aligned_cols=229 Identities=17% Similarity=0.180 Sum_probs=152.6
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC----------------CCc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT----------------PDM 362 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~----------------~~~ 362 (658)
+++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+++.. ..+
T Consensus 6 kli~fDlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~ 82 (279)
T 4dw8_A 6 KLIVLDLDGTLTNS---KKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESK 82 (279)
T ss_dssp CEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTC
T ss_pred eEEEEeCCCCCCCC---CCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCC
Confidence 45789999999997 55899999999999999999999999999999999999888621 133
Q ss_pred cEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccccccc-chhHH-HHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEe
Q 041225 363 QQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLK-RSAEI-EYLAISNDAKFSDVPQGHDVKEVAAIASLALIID 440 (658)
Q Consensus 363 ~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 440 (658)
+.+.....+.+.+.++++.+++. +...........+.. ..... ..........+........ .......++. +..
T Consensus 83 ~~~~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ki~-~~~ 159 (279)
T 4dw8_A 83 EMMYENVLPNEVVPVLYECARTN-HLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLT-DITLPVAKCL-IVG 159 (279)
T ss_dssp CEEEECCCCGGGHHHHHHHHHHT-TCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHH-HSCSCCSCEE-EES
T ss_pred eEEEEecCCHHHHHHHHHHHHHc-CCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHH-hhcCCceEEE-EeC
Confidence 44555667888899999888764 111111111111111 01111 1111111111111111000 0012233443 333
Q ss_pred CccHHHHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEec
Q 041225 441 GNSLVYILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGIC 514 (658)
Q Consensus 441 ~~~~~~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~ 514 (658)
..+....+.+.+...+ ..++.+.+..+++.+.+.+|+.+++.++++ +++++++||||.||++|++.||+||||
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam- 238 (279)
T 4dw8_A 160 DAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM- 238 (279)
T ss_dssp CHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-
T ss_pred CHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc-
Confidence 4333333333333322 345556677899999999999999999988 668899999999999999999999999
Q ss_pred Cccchhhhhhcccccccccc
Q 041225 515 GQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 515 ~~~~~~~k~~AD~vl~~~~~ 534 (658)
+|+.+.+|++||+|+.+.+-
T Consensus 239 ~na~~~~k~~A~~v~~~~~e 258 (279)
T 4dw8_A 239 GNAQEPVKKAADYITLTNDE 258 (279)
T ss_dssp TTSCHHHHHHCSEECCCGGG
T ss_pred CCCcHHHHHhCCEEcCCCCC
Confidence 77888899999999977643
No 13
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=99.86 E-value=1.4e-21 Score=197.35 Aligned_cols=230 Identities=14% Similarity=0.131 Sum_probs=153.5
Q ss_pred HHHhhhccceeeecccccc-ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc----C-------CCccEEE
Q 041225 299 TAALIECDLTLLGATGIED-KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL----T-------PDMQQII 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d-~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~----~-------~~~~~i~ 366 (658)
+++++|+||||++. .. .+++.+.++|++++++|++++++|||++..+..+...+++. . ..++.+.
T Consensus 22 kli~~DlDGTLl~~---~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~ 98 (283)
T 3dao_A 22 KLIATDIDGTLVKD---GSLLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILK 98 (283)
T ss_dssp CEEEECCBTTTBST---TCSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEE
T ss_pred eEEEEeCcCCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEE
Confidence 56789999999986 55 79999999999999999999999999999999888776642 1 1345556
Q ss_pred EcCCCHHHHHHHHHHHHHh-cCcccCccccccccccc-hhH-HHHHHhhcCCCCCCCCCCCchhhh--hccCcEEEEEeC
Q 041225 367 INGNSEEECKDLLADAKAR-YGVKSSNRTKCNSKLKR-SAE-IEYLAISNDAKFSDVPQGHDVKEV--AAIASLALIIDG 441 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~-~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~ 441 (658)
....+.+.++++++.+.+. .............+... ... ................ ..... ....++.++.+.
T Consensus 99 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~l~~~~~~ki~i~~~~ 175 (283)
T 3dao_A 99 TYPMDEDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVD---DITRLDRNDIIKFTVFHPD 175 (283)
T ss_dssp ECCCCHHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECS---CGGGCCCSCCCEEEEECSS
T ss_pred EecCCHHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcC---CHHHcCccCceEEEEEcCh
Confidence 6677889999999888765 12211111111111111 111 1112111111111111 11111 223344443233
Q ss_pred ccHHHHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecC
Q 041225 442 NSLVYILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICG 515 (658)
Q Consensus 442 ~~~~~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~ 515 (658)
..... +.+.+...+ ..++.+.+..+++.+.+.+|+.+++.++++ +.++|++|||+.||++|++.||+|||| +
T Consensus 176 ~~~~~-~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam-~ 253 (283)
T 3dao_A 176 KCEEL-CTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV-S 253 (283)
T ss_dssp CHHHH-HTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE-T
T ss_pred HHHHH-HHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc-C
Confidence 33322 222232222 345667778899999999999999999988 568899999999999999999999999 7
Q ss_pred ccchhhhhhcccccccccchH
Q 041225 516 QEGRQAVMASDFAMGQFRFLK 536 (658)
Q Consensus 516 ~~~~~~k~~AD~vl~~~~~l~ 536 (658)
|+.+.+|++||+|+.+.+--.
T Consensus 254 na~~~~k~~A~~v~~s~~edG 274 (283)
T 3dao_A 254 NARQEVIAAAKHTCAPYWENG 274 (283)
T ss_dssp TSCHHHHHHSSEEECCGGGTH
T ss_pred CCCHHHHHhcCeECCCCCCCh
Confidence 778889999999988765533
No 14
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=99.86 E-value=8.4e-22 Score=198.65 Aligned_cols=228 Identities=18% Similarity=0.160 Sum_probs=136.1
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC---------------CCcc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT---------------PDMQ 363 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~---------------~~~~ 363 (658)
+.+++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+|+.. ..++
T Consensus 6 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~ 82 (279)
T 3mpo_A 6 KLIAIDIDGTLLNE---KNELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGK 82 (279)
T ss_dssp CEEEECC--------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSC
T ss_pred EEEEEcCcCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCC
Confidence 45789999999998 55899999999999999999999999999999999999988753 2344
Q ss_pred EEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccch--hHHHHHH-hhcCCCCCCCCCCCchhhhhccCcEEEEEe
Q 041225 364 QIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRS--AEIEYLA-ISNDAKFSDVPQGHDVKEVAAIASLALIID 440 (658)
Q Consensus 364 ~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 440 (658)
.+.....+.+.++++++.+++. +...........+.... ....... ........ ..............++.+ ..
T Consensus 83 ~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ki~~-~~ 159 (279)
T 3mpo_A 83 VLTNHSLTYEDYIDLEAWARKV-RAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQ-YREVSETPRDLTISKAMF-VD 159 (279)
T ss_dssp EEEECCCCHHHHHHHHHHHHHT-TCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEE-ECCGGGSCTTCCCCEEEE-EC
T ss_pred EEEecCCCHHHHHHHHHHHHHc-CCeEEEEECCEEEEcCCcchHHHHHHhhccCCcce-ecCHHHhhccCCcEEEEE-cC
Confidence 5556667888999999888764 11111111111111110 0111110 11111100 000001111122333333 33
Q ss_pred CccHHHHHHHhhHH---hhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEec
Q 041225 441 GNSLVYILEKDLES---DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGIC 514 (658)
Q Consensus 441 ~~~~~~~~~~~~~~---~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~ 514 (658)
.......+.+.+.. ....++.+.+..+++.+.+.+|+.+++.++++ +++++++||||.||++|++.||+||||
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam- 238 (279)
T 3mpo_A 160 YPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM- 238 (279)
T ss_dssp CHHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC-
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec-
Confidence 33333333333322 22456667788999999999999999999988 568899999999999999999999999
Q ss_pred Cccchhhhhhccccccccc
Q 041225 515 GQEGRQAVMASDFAMGQFR 533 (658)
Q Consensus 515 ~~~~~~~k~~AD~vl~~~~ 533 (658)
+|+.+.+|++||+|+.+.+
T Consensus 239 ~na~~~~k~~A~~v~~~~~ 257 (279)
T 3mpo_A 239 GNAIDEVKEAAQAVTLTNA 257 (279)
T ss_dssp ---CCHHHHHCSCBC----
T ss_pred cCCCHHHHHhcceeccCCC
Confidence 7777789999999987654
No 15
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=99.86 E-value=5.6e-22 Score=200.53 Aligned_cols=232 Identities=16% Similarity=0.150 Sum_probs=147.4
Q ss_pred HHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC------------CCccE
Q 041225 297 RQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT------------PDMQQ 364 (658)
Q Consensus 297 ~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~------------~~~~~ 364 (658)
..+++++|+||||++. ...+++.+.++|++++++|++++++|||++..+..+.+.+|+.. .+++.
T Consensus 20 ~~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~ 96 (285)
T 3pgv_A 20 MYQVVASDLDGTLLSP---DHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQ 96 (285)
T ss_dssp -CCEEEEECCCCCSCT---TSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCE
T ss_pred cceEEEEeCcCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCE
Confidence 3467899999999997 55899999999999999999999999999999999998888732 23455
Q ss_pred EEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccc-hhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCcc
Q 041225 365 IIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR-SAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNS 443 (658)
Q Consensus 365 i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 443 (658)
+.....+.+.+.++++..................+... ..............+. ....... ......++.+.....+
T Consensus 97 l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~ki~~~~~~~~ 174 (285)
T 3pgv_A 97 IFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYK-LYEPGEL-DPQGISKVFFTCEDHE 174 (285)
T ss_dssp EEECCCCHHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEE-ECCTTCS-CCSSEEEEEEECSCHH
T ss_pred EEecCCCHHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccE-EecHHHc-CCCCceEEEEeCCCHH
Confidence 56667788888888763322211111000000111111 0000000000000000 0000000 0111222222212323
Q ss_pred HHHHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCcc
Q 041225 444 LVYILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQE 517 (658)
Q Consensus 444 ~~~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~ 517 (658)
....+.+.+...+ ..+..+....+++.+.+.+|+.+++.++++ +.+++++|||+.||++|++.||+|||| +|+
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm-~Na 253 (285)
T 3pgv_A 175 HLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM-ANA 253 (285)
T ss_dssp HHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTS
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc-cCC
Confidence 3333334343322 345567778899999999999999999987 568999999999999999999999999 788
Q ss_pred chhhhhhccc--ccccccc
Q 041225 518 GRQAVMASDF--AMGQFRF 534 (658)
Q Consensus 518 ~~~~k~~AD~--vl~~~~~ 534 (658)
.+.+|++||+ ++.+.+-
T Consensus 254 ~~~vk~~A~~~~v~~sn~e 272 (285)
T 3pgv_A 254 HQRLKDLHPELEVIGSNAD 272 (285)
T ss_dssp CHHHHHHCTTSEECCCGGG
T ss_pred CHHHHHhCCCCEecccCCc
Confidence 8889999995 5555443
No 16
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=99.84 E-value=8.7e-21 Score=188.87 Aligned_cols=228 Identities=17% Similarity=0.126 Sum_probs=147.4
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc---CC-------CccEEEEc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL---TP-------DMQQIIIN 368 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~---~~-------~~~~i~~~ 368 (658)
+++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+++. .. .++++...
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~ 80 (258)
T 2pq0_A 4 KIVFFDIDGTLLDE---QKQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQ 80 (258)
T ss_dssp CEEEECTBTTTBCT---TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEEC
T ss_pred eEEEEeCCCCCcCC---CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEe
Confidence 34679999999997 5579999999999999999999999999999998888887642 22 23444556
Q ss_pred CCCHHHHHHHHHHHHHhcCcccCccccccccccc-h-hHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHH
Q 041225 369 GNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR-S-AEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVY 446 (658)
Q Consensus 369 g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 446 (658)
..+.+.++++++.+++. +...........+... . .............+..... .........++. +...+....
T Consensus 81 ~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~k~~-~~~~~~~~~ 156 (258)
T 2pq0_A 81 PLRREKVRALTEEAHKN-GHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDP--LYYENKDIYQAL-LFCRAEEEE 156 (258)
T ss_dssp CCCHHHHHHHHHHHHHT-TCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCT--TGGGGSCCCEEE-ECSCHHHHH
T ss_pred cCCHHHHHHHHHHHHhC-CCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCcccccc--chhhccCceEEE-EECCHHHHH
Confidence 77899999999988764 1111111000101111 1 1111111111111111111 111112222322 222222222
Q ss_pred HHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhh
Q 041225 447 ILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVM 523 (658)
Q Consensus 447 ~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~ 523 (658)
.+.+.+. ...+..+.+..+++.+.+++|+.+++.++++ ++++++|||||.||++|++.||+|||| +|+.+.+|+
T Consensus 157 ~~~~~~~--~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam-~na~~~~k~ 233 (258)
T 2pq0_A 157 PYVRNYP--EFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM-GNAHEEVKR 233 (258)
T ss_dssp HHHHHCT--TEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE-TTCCHHHHH
T ss_pred HHHHhCC--CeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe-CCCcHHHHH
Confidence 2221111 1233445667899999999999999999987 678999999999999999999999999 678888999
Q ss_pred hcccccccccchH
Q 041225 524 ASDFAMGQFRFLK 536 (658)
Q Consensus 524 ~AD~vl~~~~~l~ 536 (658)
.||+|+.+.+.-.
T Consensus 234 ~A~~v~~~~~~dG 246 (258)
T 2pq0_A 234 VADFVTKPVDKEG 246 (258)
T ss_dssp TCSEEECCGGGTH
T ss_pred hCCEEeCCCCcch
Confidence 9999987765443
No 17
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.84 E-value=6.3e-21 Score=193.41 Aligned_cols=231 Identities=16% Similarity=0.147 Sum_probs=151.3
Q ss_pred HHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC------------CCccEE
Q 041225 298 QTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT------------PDMQQI 365 (658)
Q Consensus 298 ~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~------------~~~~~i 365 (658)
.+++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+|+.. ..++.+
T Consensus 6 ~kli~fDlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~ 82 (290)
T 3dnp_A 6 KQLLALNIDGALLRS---NGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPF 82 (290)
T ss_dssp CCEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCS
T ss_pred ceEEEEcCCCCCCCC---CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEE
Confidence 356789999999998 55899999999999999999999999999999999999888641 234445
Q ss_pred EEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchh-H--HHHHHhhcC-CCC-CCCCCCCchhh-----hhccCcE
Q 041225 366 IINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSA-E--IEYLAISND-AKF-SDVPQGHDVKE-----VAAIASL 435 (658)
Q Consensus 366 ~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~-~~~-~~~~~~~~~~~-----~~~~~~~ 435 (658)
.....+.+.+.++++.+++. +...........+..... . ......... ... ..........+ .....++
T Consensus 83 ~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki 161 (290)
T 3dnp_A 83 FEKRISDDHTFNIVQVLESY-QCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVI 161 (290)
T ss_dssp EECCCCHHHHHHHHHHHHTS-SCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEE
T ss_pred EecCCCHHHHHHHHHHHHHc-CceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEE
Confidence 55667888999999888764 111111110000110000 0 000000000 000 00000000111 1123344
Q ss_pred EEEEeCccHHHHHHHhhHH--hhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhccee
Q 041225 436 ALIIDGNSLVYILEKDLES--DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVG 510 (658)
Q Consensus 436 ~l~~~~~~~~~~~~~~~~~--~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vg 510 (658)
++....+....+.+.+.. ....+..+.+..+++.+.+.+|+.+++.++++ +++++++||||.||++|++.||+|
T Consensus 162 -~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~ 240 (290)
T 3dnp_A 162 -EVYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLG 240 (290)
T ss_dssp -EEECCGGGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred -EEeCCHHHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCE
Confidence 334444333333333221 22345566778899999999999999999988 668899999999999999999999
Q ss_pred EEecCccchhhhhhcccccccccc
Q 041225 511 VGICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 511 Iam~~~~~~~~k~~AD~vl~~~~~ 534 (658)
||| +|+.+.+|+.||+|+.+.+-
T Consensus 241 vam-~na~~~~k~~Ad~v~~s~~e 263 (290)
T 3dnp_A 241 VAM-GNAVPEIKRKADWVTRSNDE 263 (290)
T ss_dssp EEC-TTSCHHHHHHSSEECCCTTT
T ss_pred EEe-cCCcHHHHHhcCEECCCCCc
Confidence 999 77778899999999877654
No 18
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=99.84 E-value=3.1e-21 Score=196.91 Aligned_cols=232 Identities=14% Similarity=0.116 Sum_probs=152.9
Q ss_pred HHHHhhhccceeeeccccccccCCC-hHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc-----------CCCccEE
Q 041225 298 QTAALIECDLTLLGATGIEDKLQDG-VPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL-----------TPDMQQI 365 (658)
Q Consensus 298 ~~~~~~d~DgTllg~~~~~d~l~~~-~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~-----------~~~~~~i 365 (658)
.+++++|+||||++. +..+.+. +.++|++++++|+.++++|||++..+..+...+++. ...++.+
T Consensus 37 iKli~fDlDGTLld~---~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~i 113 (304)
T 3l7y_A 37 VKVIATDMDGTFLNS---KGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSL 113 (304)
T ss_dssp CSEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTEEE
T ss_pred eEEEEEeCCCCCCCC---CCccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCEEE
Confidence 356889999999997 5578888 899999999999999999999999988876665541 1234455
Q ss_pred EEcCCCHHHHHHHHHHHHHhc-CcccCccccccccccch--hHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCc
Q 041225 366 IINGNSEEECKDLLADAKARY-GVKSSNRTKCNSKLKRS--AEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGN 442 (658)
Q Consensus 366 ~~~g~~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 442 (658)
.....+.+.+.++++.+.+.+ +...........+.... ....................... ......++.+.. ..
T Consensus 114 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~ki~~~~-~~ 191 (304)
T 3l7y_A 114 IEVFQQREDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPL-PDERFFKLTLQV-KE 191 (304)
T ss_dssp EECCCCHHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSC-C-CCEEEEEEEC-CG
T ss_pred EEecCCHHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHc-CcCCeEEEEEEc-CH
Confidence 556678899999999887742 22222111111111111 11111111111111000011100 011223333333 33
Q ss_pred cHHHHHHHhhHHh----hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecC
Q 041225 443 SLVYILEKDLESD----LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICG 515 (658)
Q Consensus 443 ~~~~~~~~~~~~~----~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~ 515 (658)
.....+.+.+... ...++.+....+++.+.+.+|+.+++.++++ +++++++|||+.||++|++.||+|||| +
T Consensus 192 ~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam-~ 270 (304)
T 3l7y_A 192 EESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM-A 270 (304)
T ss_dssp GGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC-T
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc-C
Confidence 3333333333322 2445667778899999999999999999987 568899999999999999999999999 7
Q ss_pred ccchhhhhhcccccccccch
Q 041225 516 QEGRQAVMASDFAMGQFRFL 535 (658)
Q Consensus 516 ~~~~~~k~~AD~vl~~~~~l 535 (658)
|+.+.+|++||+|+.+.+--
T Consensus 271 na~~~~k~~Ad~v~~~~~ed 290 (304)
T 3l7y_A 271 NAPKNVKAAANYQAKSNDES 290 (304)
T ss_dssp TSCHHHHHHCSEECCCGGGT
T ss_pred CcCHHHHHhccEEcCCCCcc
Confidence 78888999999998876553
No 19
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=99.83 E-value=3e-20 Score=187.39 Aligned_cols=229 Identities=16% Similarity=0.142 Sum_probs=147.4
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC-------C---------Cc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT-------P---------DM 362 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~-------~---------~~ 362 (658)
+++++|+||||++. +..+++++.++|++++++|++++++|||++..+..+.+.+++.. . ++
T Consensus 6 kli~~DlDGTLl~~---~~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~ 82 (282)
T 1rkq_A 6 KLIAIDMDGTLLLP---DHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADG 82 (282)
T ss_dssp CEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTC
T ss_pred eEEEEeCCCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCC
Confidence 35689999999997 56899999999999999999999999999999999999887632 1 23
Q ss_pred cEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccc--hhHHHHHH-hhcCCCCCCCCCCCchhhhhccCcEEEEE
Q 041225 363 QQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR--SAEIEYLA-ISNDAKFSDVPQGHDVKEVAAIASLALII 439 (658)
Q Consensus 363 ~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 439 (658)
+++.....+.+.++++++.+++. +...........+... ........ ........ ..............++.+.
T Consensus 83 ~~i~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ki~~~- 159 (282)
T 1rkq_A 83 STVAQTALSYDDYRFLEKLSREV-GSHFHALDRTTLYTANRDISYYTVHESFVATIPLV-FCEAEKMDPNTQFLKVMMI- 159 (282)
T ss_dssp CEEEECCBCHHHHHHHHHHHHHH-TCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEE-ECCGGGSCTTCCBCEEEEE-
T ss_pred eEEEEecCCHHHHHHHHHHHHHc-CCEEEEEECCEEEEcCCchhHHHHHHhhhccCCcc-ccchhHhcccCCceEEEEE-
Confidence 34444556888899999888764 2211111111111111 00111110 01111100 0000000001123344333
Q ss_pred eCccHHHHHHHhhHHh---hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEe
Q 041225 440 DGNSLVYILEKDLESD---LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 440 ~~~~~~~~~~~~~~~~---~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
...+....+.+.+... ...+..+.+.++++.+.+++|+.+++.++++ +++++++|||+.||++|++.||+||||
T Consensus 160 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~ 239 (282)
T 1rkq_A 160 DEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV 239 (282)
T ss_dssp CCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred CCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEe
Confidence 3333222233333222 2344556677899999999999999999987 567899999999999999999999999
Q ss_pred cCccchhhhhhcccccccccc
Q 041225 514 CGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 514 ~~~~~~~~k~~AD~vl~~~~~ 534 (658)
+++.+.+++.||+++.+.+.
T Consensus 240 -~n~~~~~~~~a~~v~~~~~~ 259 (282)
T 1rkq_A 240 -DNAIPSVKEVANFVTKSNLE 259 (282)
T ss_dssp -TTSCHHHHHHCSEECCCTTT
T ss_pred -cCCcHHHHhhCCEEecCCCc
Confidence 56666788999999876543
No 20
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=99.83 E-value=5e-20 Score=185.04 Aligned_cols=230 Identities=16% Similarity=0.124 Sum_probs=151.2
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc---CC-------CccEEEEc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL---TP-------DMQQIIIN 368 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~---~~-------~~~~i~~~ 368 (658)
+++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+++. .. .++.+...
T Consensus 6 kli~fDlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~ 82 (274)
T 3fzq_A 6 KLLILDIDGTLRDE---VYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYNQ 82 (274)
T ss_dssp CEEEECSBTTTBBT---TTBCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEEEC
T ss_pred eEEEEECCCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEEEc
Confidence 35689999999998 5589999999999999999999999999999998888777652 11 33445566
Q ss_pred CCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHh--------------hcCCCCCCCCCCCchhhhhccCc
Q 041225 369 GNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAI--------------SNDAKFSDVPQGHDVKEVAAIAS 434 (658)
Q Consensus 369 g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~ 434 (658)
..+.+.+.++++.+++. +...........+.. ......+.. ............... ......+
T Consensus 83 ~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~k 159 (274)
T 3fzq_A 83 SFNQRLIKEVVCLLKKR-EVAFSIESQEKVFMN-QKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEY-KSQDIHK 159 (274)
T ss_dssp CCCHHHHHHHHHHHHHH-TCEEEEECSSCEEEC-HHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGC-SSCCCCE
T ss_pred CCCHHHHHHHHHHHHHC-CceEEEEeCCceEeC-CchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhh-cccCeEE
Confidence 67889999999888774 111111111111111 111111100 000000000100000 0122334
Q ss_pred EEEEEeCccHHHHHHHhhHHhhhhhhccCC--eeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce
Q 041225 435 LALIIDGNSLVYILEKDLESDLFDLATSCR--VVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV 509 (658)
Q Consensus 435 ~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~--~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v 509 (658)
+.+. ........+.+.+... ..+..+.+ .++++.+.+.+|+.+++.++++ +++++++|||+.||++|++.||+
T Consensus 160 i~~~-~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~ 237 (274)
T 3fzq_A 160 ICLW-SNEKVFDEVKDILQDK-MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDV 237 (274)
T ss_dssp EEEE-CCHHHHHHHHHHHGGG-EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSE
T ss_pred EEEE-cCHHHHHHHHHHhhcc-eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCc
Confidence 4444 3333333333333332 24444555 7899999999999999999987 67899999999999999999999
Q ss_pred eEEecCccchhhhhhcccccccccchHH
Q 041225 510 GVGICGQEGRQAVMASDFAMGQFRFLKR 537 (658)
Q Consensus 510 gIam~~~~~~~~k~~AD~vl~~~~~l~~ 537 (658)
|||| +|+.+++|+.||+|+.+.+--..
T Consensus 238 ~vam-~na~~~~k~~A~~v~~~~~edGv 264 (274)
T 3fzq_A 238 TIAM-KNSHQQLKDIATSICEDIFDNGI 264 (274)
T ss_dssp EEEE-TTSCHHHHHHCSEEECCGGGTHH
T ss_pred eEEe-cCccHHHHHhhhheeCCCchhHH
Confidence 9999 77778899999999987665433
No 21
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.83 E-value=1.2e-20 Score=188.91 Aligned_cols=231 Identities=18% Similarity=0.172 Sum_probs=145.8
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc----------c-CCCccEEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL----------L-TPDMQQIII 367 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl----------~-~~~~~~i~~ 367 (658)
+++++|+||||++.. ...+++.+.++|++++++|++++++|||+...+. ....+++ + ...++.+..
T Consensus 13 Kli~~DlDGTLl~~~--~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~-~~~~l~~~~~i~~nGa~i~~~~~~~~~~ 89 (268)
T 3r4c_A 13 KVLLLDVDGTLLSFE--THKVSQSSIDALKKVHDSGIKIVIATGRAASDLH-EIDAVPYDGVIALNGAECVLRDGSVIRK 89 (268)
T ss_dssp CEEEECSBTTTBCTT--TCSCCHHHHHHHHHHHHTTCEEEEECSSCTTCCG-GGTTSCCCEEEEGGGTEEEETTSCEEEE
T ss_pred EEEEEeCCCCCcCCC--CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHhH-HHHhcCCCcEEEeCCcEEEEcCCeEEEE
Confidence 457899999999831 3479999999999999999999999999987653 3334432 1 223345667
Q ss_pred cCCCHHHHHHHHHHHHHhcCcccCccccccccccc-hhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHH
Q 041225 368 NGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR-SAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVY 446 (658)
Q Consensus 368 ~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 446 (658)
...+.+.+.++++.+++. ............+... ...............................++.+....... .
T Consensus 90 ~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 167 (268)
T 3r4c_A 90 VAIPAQDFRKSMELAREF-DFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAE-Q 167 (268)
T ss_dssp CCCCHHHHHHHHHHHHHT-TCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEEECCHHHH-H
T ss_pred ecCCHHHHHHHHHHHHHc-CcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEEecChHHH-H
Confidence 778899999999888663 1111111111111111 111111111111111111111001111233344333322222 1
Q ss_pred HHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhh
Q 041225 447 ILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVM 523 (658)
Q Consensus 447 ~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~ 523 (658)
.+.+.+ .......+.+..+++.+.+.+|+.+++.++++ +++++++||||.||++|++.||+|||| +|+.+.+|+
T Consensus 168 ~~~~~~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam-~na~~~~k~ 244 (268)
T 3r4c_A 168 KVMPLL--SGLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM-GNASEKVQS 244 (268)
T ss_dssp HHGGGC--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHH
T ss_pred HHHHhC--CCcEEEEecCCeEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe-CCCcHHHHH
Confidence 111111 11234455667899999999999999999988 667899999999999999999999999 778888999
Q ss_pred hcccccccccchHH
Q 041225 524 ASDFAMGQFRFLKR 537 (658)
Q Consensus 524 ~AD~vl~~~~~l~~ 537 (658)
+||+|+.+.+--..
T Consensus 245 ~Ad~v~~~~~edGv 258 (268)
T 3r4c_A 245 VADFVTDTVDNSGL 258 (268)
T ss_dssp TCSEECCCTTTTHH
T ss_pred hcCEeeCCCCcCHH
Confidence 99999987655433
No 22
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=99.81 E-value=2.4e-20 Score=187.04 Aligned_cols=228 Identities=16% Similarity=0.195 Sum_probs=146.2
Q ss_pred HHHhhhccceeeeccccccccCCCh-HHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc----cCC-------CccEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGV-PEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL----LTP-------DMQQII 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~-~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl----~~~-------~~~~i~ 366 (658)
+++++|+||||++. +..+++.+ .++|++|+++|++++++|||++..+..+...+++ +.. +++++.
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~ 80 (271)
T 1rlm_A 4 KVIVTDMDGTFLND---AKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLF 80 (271)
T ss_dssp CEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEE
T ss_pred cEEEEeCCCCCCCC---CCcCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCeEEE
Confidence 34679999999997 45788885 9999999999999999999999988777665542 222 233455
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCccccccccccc--hhHHHHHHhhcCCCCCCCCCCCchhhh-hccCcEEEEEeCcc
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR--SAEIEYLAISNDAKFSDVPQGHDVKEV-AAIASLALIIDGNS 443 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~ 443 (658)
....+.+.++++++.+++..............+... ........... +............ ....++.+..+...
T Consensus 81 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ki~i~~~~~~ 157 (271)
T 1rlm_A 81 HGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKH---YHRLKPVKDYQEIDDVLFKFSLNLPDEQ 157 (271)
T ss_dssp ECCCCHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTT---CSSEEEESCGGGCCSCEEEEEEECCGGG
T ss_pred EecCCHHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHh---CCCCEEeCchhhCCCceEEEEEEcCHHH
Confidence 667789999999998876432211111111111111 11111111110 1110000011111 12233333333333
Q ss_pred HHHHHHHhhHHh---hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCcc
Q 041225 444 LVYILEKDLESD---LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQE 517 (658)
Q Consensus 444 ~~~~~~~~~~~~---~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~ 517 (658)
...+.+.+... ...+..+++.++++.+.+.+|+.+++.++++ +++++++|||+.||++|++.||+||+| +++
T Consensus 158 -~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~-~na 235 (271)
T 1rlm_A 158 -IPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNA 235 (271)
T ss_dssp -HHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTC
T ss_pred -HHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEe-CCc
Confidence 22222333321 2344556677899999999999999999987 567899999999999999999999999 667
Q ss_pred chhhhhhcccccccccc
Q 041225 518 GRQAVMASDFAMGQFRF 534 (658)
Q Consensus 518 ~~~~k~~AD~vl~~~~~ 534 (658)
.+.++..||+++.+.+.
T Consensus 236 ~~~~k~~a~~v~~~~~~ 252 (271)
T 1rlm_A 236 AENIKQIARYATDDNNH 252 (271)
T ss_dssp CHHHHHHCSEECCCGGG
T ss_pred cHHHHHhCCeeCcCCCC
Confidence 67789999999877654
No 23
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=99.81 E-value=1.4e-19 Score=180.97 Aligned_cols=228 Identities=17% Similarity=0.119 Sum_probs=147.9
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC------------C-CccEEE
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT------------P-DMQQII 366 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~------------~-~~~~i~ 366 (658)
++++|+||||++. +..+++++.++|++ +++|++++++|||++..+..+...+|+.. . +++++.
T Consensus 4 li~~DlDGTLl~~---~~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~i~ 79 (268)
T 1nf2_A 4 VFVFDLDGTLLND---NLEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVIL 79 (268)
T ss_dssp EEEEECCCCCSCT---TSCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEE
T ss_pred EEEEeCCCcCCCC---CCccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCCEEE
Confidence 4678999999997 55899999999999 99999999999999999999998887632 1 345555
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHH-HHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHH
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEY-LAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLV 445 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 445 (658)
....+.+.++++++.+++. +...........+......... .........................++.+. ...+..
T Consensus 80 ~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~~~~~ 157 (268)
T 1nf2_A 80 NEKIPPEVAKDIIEYIKPL-NVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLI-DTPERL 157 (268)
T ss_dssp ECCBCHHHHHHHHHHHGGG-CCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEE-CCHHHH
T ss_pred ecCCCHHHHHHHHHHHHhC-CCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEE-CCHHHH
Confidence 6677889999999888763 2111111111111111111111 111111100000000011111233444433 333333
Q ss_pred HHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccch
Q 041225 446 YILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGR 519 (658)
Q Consensus 446 ~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~ 519 (658)
..+.+.+...+ ..+..+.+.++++.+.+.+|+.+++.++++ +++++++|||+.||++|++.||+||+| +++.+
T Consensus 158 ~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~-~n~~~ 236 (268)
T 1nf2_A 158 DELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIE 236 (268)
T ss_dssp HHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCH
T ss_pred HHHHHHHHHHhcCCEEEEEecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe-cCCCH
Confidence 33333333222 334456667899999999999999999987 567899999999999999999999999 56677
Q ss_pred hhhhhcccccccccc
Q 041225 520 QAVMASDFAMGQFRF 534 (658)
Q Consensus 520 ~~k~~AD~vl~~~~~ 534 (658)
.++..||+++.+.+.
T Consensus 237 ~~~~~a~~v~~~~~~ 251 (268)
T 1nf2_A 237 KVKEASDIVTLTNND 251 (268)
T ss_dssp HHHHHCSEECCCTTT
T ss_pred HHHhhCCEEEccCCc
Confidence 788999999876554
No 24
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=99.79 E-value=1.7e-19 Score=183.37 Aligned_cols=229 Identities=14% Similarity=0.116 Sum_probs=146.2
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHH--HHcC-cc-------CC--------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA--LSCK-LL-------TP-------- 360 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia--~~~g-l~-------~~-------- 360 (658)
.++++|+||||++.. +..+++++.++|++|+++|++|+++|||++..+..+. ..++ +. ..
T Consensus 28 kli~~DlDGTLl~~~--~~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~~~ 105 (301)
T 2b30_A 28 KLLLIDFDGTLFVDK--DIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQ 105 (301)
T ss_dssp CEEEEETBTTTBCCT--TTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECT
T ss_pred cEEEEECCCCCcCCC--CCccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEEeC
Confidence 467899999999851 2379999999999999999999999999999998888 7665 42 22
Q ss_pred CccEEEEcCCCHHHHHHHHHHHHHhcCc-ccCcc-ccccccccch---hHHHHHHhhcCCCCCCCCCCCchhhhhccCcE
Q 041225 361 DMQQIIINGNSEEECKDLLADAKARYGV-KSSNR-TKCNSKLKRS---AEIEYLAISNDAKFSDVPQGHDVKEVAAIASL 435 (658)
Q Consensus 361 ~~~~i~~~g~~~~~~~~ii~~~~~~~~~-~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (658)
+++++.....+.+.++++++.+++. +. ..... .....+.... .................. .......+..++
T Consensus 106 ~~~~i~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~ki 182 (301)
T 2b30_A 106 IGYTLLDETIETDVYAELISYLVEK-NLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRH--NEMLKYRTMNKL 182 (301)
T ss_dssp TCCEEEECCCCHHHHHHHHHHHHHT-TCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECH--HHHTTCCCCSEE
T ss_pred CCCEEEEccCCHHHHHHHHHHHHHc-CCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecc--hhhhccCCceEE
Confidence 2344455566889999999888763 22 11111 0011111100 000100000000000000 000000123344
Q ss_pred EEEEeCccHHHHHHHhhHHh---hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce
Q 041225 436 ALIIDGNSLVYILEKDLESD---LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV 509 (658)
Q Consensus 436 ~l~~~~~~~~~~~~~~~~~~---~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v 509 (658)
.+..+...... +.+.+... ...+..+++.++++.+.+++|+.+++.++++ +++++++|||+.||++|++.||+
T Consensus 183 ~~~~~~~~~~~-~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~ 261 (301)
T 2b30_A 183 MIVLDPSESKT-VIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKY 261 (301)
T ss_dssp EECCCTTTHHH-HHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSE
T ss_pred EEECCHHHHHH-HHHHHHHHhcCCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCC
Confidence 33333333333 33333322 2345556778899999999999999999987 56789999999999999999999
Q ss_pred eEEecCccchhhhhhcccccc-cccc
Q 041225 510 GVGICGQEGRQAVMASDFAMG-QFRF 534 (658)
Q Consensus 510 gIam~~~~~~~~k~~AD~vl~-~~~~ 534 (658)
|||| +++.+.++..||+++. +...
T Consensus 262 ~va~-~na~~~~k~~a~~v~~~~~~~ 286 (301)
T 2b30_A 262 SFAV-ANATDSAKSHAKCVLPVSHRE 286 (301)
T ss_dssp EEEC-TTCCHHHHHHSSEECSSCTTT
T ss_pred eEEE-cCCcHHHHhhCCEEEccCCCC
Confidence 9999 5666678999999987 6544
No 25
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=99.79 E-value=7e-19 Score=177.99 Aligned_cols=233 Identities=16% Similarity=0.077 Sum_probs=149.7
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC------------CccEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP------------DMQQII 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~------------~~~~i~ 366 (658)
+++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+++..+ .++.+.
T Consensus 5 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~~~ 81 (288)
T 1nrw_A 5 KLIAIDLDGTLLNS---KHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRLYH 81 (288)
T ss_dssp CEEEEECCCCCSCT---TSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCEEE
T ss_pred EEEEEeCCCCCCCC---CCccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCcEEE
Confidence 45789999999997 558999999999999999999999999999999998887765321 344555
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchh--HHHHH-Hhh--------------------cCCCCCCCCCC
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSA--EIEYL-AIS--------------------NDAKFSDVPQG 423 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~--------------------~~~~~~~~~~~ 423 (658)
....+.+.++++++.+++. +...........+..... ..... ... ....+......
T Consensus 82 ~~~~~~~~~~~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (288)
T 1nrw_A 82 HETIDKKRAYDILSWLESE-NYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSF 160 (288)
T ss_dssp ECCCCHHHHHHHHHHHHHT-TCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEECSCG
T ss_pred EeeCCHHHHHHHHHHHHHC-CcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcCCceEcCCH
Confidence 6667889999999988764 211111111111111100 00000 000 00001111111
Q ss_pred Cchh---hhhccCcEEEEEeCccHHHHHHHhhHH-hhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcC
Q 041225 424 HDVK---EVAAIASLALIIDGNSLVYILEKDLES-DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGD 496 (658)
Q Consensus 424 ~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGD 496 (658)
.... ......++.+.....+....+.+.+.. ....+..+++.++++.+.+++|+.+++.++++ +++++++|||
T Consensus 161 ~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD 240 (288)
T 1nrw_A 161 QELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGD 240 (288)
T ss_dssp GGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred HHhhccccCCCceEEEEEcCCHHHHHHHHHHHhhCCCEEEEeeCCCcEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcC
Confidence 1100 001222333332232333333333322 12345567778899999999999999999987 5678999999
Q ss_pred CcCChhhhhhcceeEEecCccchhhhhhcccccccccchH
Q 041225 497 GANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLK 536 (658)
Q Consensus 497 g~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~ 536 (658)
+.||++|++.||+||+| +++.+.++..||+++.+.+.-.
T Consensus 241 ~~nD~~m~~~ag~~va~-~~~~~~~~~~a~~v~~~~~~dG 279 (288)
T 1nrw_A 241 SLNDKSMLEAAGKGVAM-GNAREDIKSIADAVTLTNDEHG 279 (288)
T ss_dssp SGGGHHHHHHSSEEEEC-TTCCHHHHHHCSEECCCGGGTH
T ss_pred CHHHHHHHHHcCcEEEE-cCCCHHHHhhCceeecCCCcCh
Confidence 99999999999999999 6666778999999987765433
No 26
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=99.76 E-value=9.7e-19 Score=174.30 Aligned_cols=226 Identities=19% Similarity=0.208 Sum_probs=142.4
Q ss_pred HHhhhccceeeeccccccc-cCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcC----c---cCCC-------ccE
Q 041225 300 AALIECDLTLLGATGIEDK-LQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK----L---LTPD-------MQQ 364 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~-l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~g----l---~~~~-------~~~ 364 (658)
++++|+||||++. +.. +++.++++|++++++|++++++|||+ ..+..+...++ + +..+ ++.
T Consensus 4 li~~DlDGTLl~~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~ 79 (261)
T 2rbk_A 4 ALFFDIDGTLVSF---ETHRIPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGEEV 79 (261)
T ss_dssp EEEECSBTTTBCT---TTSSCCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETTEE
T ss_pred EEEEeCCCCCcCC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECCEE
Confidence 4678999999997 456 89999999999999999999999999 87766655554 2 2222 344
Q ss_pred EEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCC-CCCCCCCchhhhhccCcEEEEEeCcc
Q 041225 365 IIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKF-SDVPQGHDVKEVAAIASLALIIDGNS 443 (658)
Q Consensus 365 i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 443 (658)
+.....+.+.++++++.+++. +...........+.................. ................++.+ ...+.
T Consensus 80 i~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~ 157 (261)
T 2rbk_A 80 IYKSAIPQEEVKAMAAFCEKK-GVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTP-FITEE 157 (261)
T ss_dssp EEECCCCHHHHHHHHHHHHHH-TCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEE-CCCHH
T ss_pred EEecCCCHHHHHHHHHHHHHc-CCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEE-EeCHH
Confidence 555667889999999988764 2211111111111111111100011110000 00000001111122333322 22222
Q ss_pred HHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchh
Q 041225 444 LVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQ 520 (658)
Q Consensus 444 ~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~ 520 (658)
....+.+.+.. ..+..+.+..+++.+.+.+|+.+++.++++ +++++++|||+.||++|++.||+||+| +++.+.
T Consensus 158 ~~~~~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~n~~~~ 234 (261)
T 2rbk_A 158 EEKEVLPSIPT--CEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKED 234 (261)
T ss_dssp HHHHHGGGSTT--CEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHH
T ss_pred HHHHHHHhcCC--eEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe-cCccHH
Confidence 21222222221 345556677899999999999999999987 567899999999999999999999999 666667
Q ss_pred hhhhcccccccccc
Q 041225 521 AVMASDFAMGQFRF 534 (658)
Q Consensus 521 ~k~~AD~vl~~~~~ 534 (658)
++..||+++.+..-
T Consensus 235 ~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 235 VKAAADYVTAPIDE 248 (261)
T ss_dssp HHHHSSEECCCGGG
T ss_pred HHhhCCEEeccCch
Confidence 89999999887765
No 27
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=99.75 E-value=6.7e-18 Score=166.78 Aligned_cols=207 Identities=16% Similarity=0.121 Sum_probs=132.3
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC----CC--------------
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT----PD-------------- 361 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~----~~-------------- 361 (658)
++++|+||||+ . ...++ +++++|++|+++|++++++|||++..+..+...+++.. .+
T Consensus 4 li~~DlDGTLl-~---~~~~~-~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~ 78 (249)
T 2zos_A 4 LIFLDIDKTLI-P---GYEPD-PAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFD 78 (249)
T ss_dssp EEEECCSTTTC-T---TSCSG-GGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCCC--
T ss_pred EEEEeCCCCcc-C---CCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCccccc
Confidence 46789999999 4 33454 49999999999999999999999999999988877532 22
Q ss_pred -------ccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCc
Q 041225 362 -------MQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIAS 434 (658)
Q Consensus 362 -------~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (658)
++++.....+.+.++++++.+.+...... +... ......... ..... ............
T Consensus 79 ~~~~~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~----~~~~---~~~~~~~~~---~~~~~----~~~~~~~~~~~~ 144 (249)
T 2zos_A 79 VKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKY----YGNS---TKEEIEKFT---GMPPE----LVPLAMEREYSE 144 (249)
T ss_dssp ----CCCCCCEEECSCCHHHHHHHHHHHHHHHTCEE----GGGS---CHHHHHHHH---CCCTT----THHHHHCCSSCE
T ss_pred ccccccCceEEEecCCCHHHHHHHHHHHHhhcCEEE----ecCC---CHHHHHHHh---CCChh----HhhhhhhhhhcC
Confidence 34555667788999999888776422110 0000 000010000 00000 000000001111
Q ss_pred EEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc----CCCeEEEEcCCcCChhhhhhccee
Q 041225 435 LALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR----TDDMTLAIGDGANDVSMIQMADVG 510 (658)
Q Consensus 435 ~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~----~~~~v~aiGDg~NDi~Ml~~A~vg 510 (658)
..+.....+.... +......+..+ ...+++.+ +.+|+.+++.|+++ +.++|+|||||.||++||+.||+|
T Consensus 145 ~~~~~~~~~~~~~----l~~~~~~~~~s-~~~~ei~~-g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~ 218 (249)
T 2zos_A 145 TIFEWSRDGWEEV----LVEGGFKVTMG-SRFYTVHG-NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV 218 (249)
T ss_dssp EEEECSSSCHHHH----HHHTTCEEEEC-SSSEEEEC-SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE
T ss_pred ceEecCCHHHHHH----HHhCCEEEEec-CCeEEEeC-CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE
Confidence 1122222222222 22211233333 35789999 99999999999987 568999999999999999999999
Q ss_pred EEecCccc-hhhhhhcccccccc
Q 041225 511 VGICGQEG-RQAVMASDFAMGQF 532 (658)
Q Consensus 511 Iam~~~~~-~~~k~~AD~vl~~~ 532 (658)
||| +|+. +.+++.||+++.+.
T Consensus 219 va~-gna~~~~~~~~a~~v~~~~ 240 (249)
T 2zos_A 219 FIV-GSLKHKKAQNVSSIIDVLE 240 (249)
T ss_dssp EEE-SSCCCTTEEEESSHHHHHH
T ss_pred EEe-CCCCccccchhceEEeccc
Confidence 999 5555 66888899987654
No 28
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=99.75 E-value=1.5e-18 Score=168.71 Aligned_cols=194 Identities=16% Similarity=0.080 Sum_probs=128.2
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC----CccEEE--------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP----DMQQII-------- 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~----~~~~i~-------- 366 (658)
.++++|+||||++. +..+++++.++|++|+++|++++++|||++..+..+++.+++..+ ++..++
T Consensus 6 kli~~DlDGTLl~~---~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~ 82 (227)
T 1l6r_A 6 RLAAIDVDGNLTDR---DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKK 82 (227)
T ss_dssp CEEEEEHHHHSBCT---TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEE
T ss_pred EEEEEECCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEE
Confidence 34679999999997 568999999999999999999999999999999999998886431 222222
Q ss_pred -EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHH
Q 041225 367 -INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLV 445 (658)
Q Consensus 367 -~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 445 (658)
.... +.++++ +.+.+.+ . ....+ .... .+ .+. .. . +.....+..
T Consensus 83 ~~~~l--~~~~~i-~~~~~~~-----~--~~~~~---------~~~~---~~------~~~---~~---~-~~~~~~~~~ 127 (227)
T 1l6r_A 83 FFSNE--GTNKFL-EEMSKRT-----S--MRSIL---------TNRW---RE------AST---GF---D-IDPEDVDYV 127 (227)
T ss_dssp SSCSH--HHHHHH-HHHTTTS-----S--CBCCG---------GGGG---CS------SSE---EE---B-CCGGGHHHH
T ss_pred EeccH--HHHHHH-HHHHHHh-----c--CCccc---------cccc---ee------ccc---ce---E-EecCCHHHH
Confidence 1111 334444 3333200 0 00000 0000 00 000 00 0 111111111
Q ss_pred HHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhh
Q 041225 446 YILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAV 522 (658)
Q Consensus 446 ~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k 522 (658)
..+.+.+ ...+. +++.++++.+.+.+|+.+++.++++ +++++++||||.||++|++.|++||+| +++.+.++
T Consensus 128 ~~~~~~~---~~~~~-~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~-~n~~~~~k 202 (227)
T 1l6r_A 128 RKEAESR---GFVIF-YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP-ANATDNIK 202 (227)
T ss_dssp HHHHHTT---TEEEE-EETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC-TTSCHHHH
T ss_pred HHHHHhc---CEEEE-ecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEe-cCchHHHH
Confidence 1111111 12334 6677899999999999999999986 457899999999999999999999999 66667789
Q ss_pred hhcccccccccch
Q 041225 523 MASDFAMGQFRFL 535 (658)
Q Consensus 523 ~~AD~vl~~~~~l 535 (658)
..||+++.+.+.-
T Consensus 203 ~~a~~v~~~~~~~ 215 (227)
T 1l6r_A 203 AVSDFVSDYSYGE 215 (227)
T ss_dssp HHCSEECSCCTTH
T ss_pred HhCCEEecCCCCc
Confidence 9999998776543
No 29
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=99.72 E-value=3.2e-17 Score=164.40 Aligned_cols=219 Identities=16% Similarity=0.116 Sum_probs=126.1
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC-----CCccEE--------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT-----PDMQQI-------- 365 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~-----~~~~~i-------- 365 (658)
.++++|+||||++. ++.+.+++.++|++|+++|++++++|||++..+..+...+++.. .++..+
T Consensus 10 ~li~~DlDGTLl~~---~~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 86 (275)
T 1xvi_A 10 LLVFSDLDGTLLDS---HSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQE 86 (275)
T ss_dssp EEEEEECTTTTSCS---SCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTT
T ss_pred eEEEEeCCCCCCCC---CCcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccc
Confidence 45789999999986 45678899999999999999999999999999999998887532 344433
Q ss_pred ------EEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE
Q 041225 366 ------IINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII 439 (658)
Q Consensus 366 ------~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 439 (658)
.....+.+.++++++.+.+..+....... ... ........ ..... ..............++.
T Consensus 87 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~--~~~---~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~ 154 (275)
T 1xvi_A 87 IDGFPRIISGISHGEISLVLNTLREKEHFKFTTFD--DVD---DATIAEWT---GLSRS----QAALTQLHEASVTLIWR 154 (275)
T ss_dssp STTTTEEECSSCHHHHHHHHHHHHHHHCCCEEEGG--GSC---HHHHHHHH---CCCHH----HHHHHHCCSSCEEEEEC
T ss_pred cCceEEEecCCCHHHHHHHHHHHHHhhCcceeccC--cCC---HHHHHHhh---CCchH----HHHHHHhhccCceeEec
Confidence 33445677888888877654222111100 000 00000000 00000 00000000111112222
Q ss_pred eCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc-C---CCe--EEEEcCCcCChhhhhhcceeEEe
Q 041225 440 DGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR-T---DDM--TLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~-~---~~~--v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
...+....+.+.+......+.. ++..+++.+.+++|+.+++.++++ + .++ +++|||+.||++||+.|++||||
T Consensus 155 ~~~~~~~~~~~~l~~~~~~~~~-~~~~leI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~ 233 (275)
T 1xvi_A 155 DSDERMAQFTARLNELGLQFMQ-GARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV 233 (275)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEE-CSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC
T ss_pred CCHHHHHHHHHHHHhhCeEEEE-CCceEEEecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEe
Confidence 2222333333333322223333 356799999999999999999875 2 456 99999999999999999999999
Q ss_pred cCccc---hhhhhh--cc-cccccccc
Q 041225 514 CGQEG---RQAVMA--SD-FAMGQFRF 534 (658)
Q Consensus 514 ~~~~~---~~~k~~--AD-~vl~~~~~ 534 (658)
+|+. +.+++. || +++.+.+.
T Consensus 234 -~n~~~~~~~~~~~~~a~~~v~~~~~~ 259 (275)
T 1xvi_A 234 -KGLNREGVHLHDEDPARVWRTQREGP 259 (275)
T ss_dssp -CCCC----------------------
T ss_pred -cCCCccchhhccccCCceeEccCCCc
Confidence 5543 445543 78 77765543
No 30
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=99.70 E-value=1.2e-17 Score=163.65 Aligned_cols=190 Identities=13% Similarity=0.133 Sum_probs=117.3
Q ss_pred HHhhhccceeeeccc--cccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc-CccCCCccEEEEcCC------
Q 041225 300 AALIECDLTLLGATG--IEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC-KLLTPDMQQIIINGN------ 370 (658)
Q Consensus 300 ~~~~d~DgTllg~~~--~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~-gl~~~~~~~i~~~g~------ 370 (658)
++++|+||||++... -...+++++.++|++|+++| +|+++|||++..+..+...+ .++..++..+..++.
T Consensus 3 li~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~~~~~~ 81 (239)
T 1u02_A 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQIVYNNG 81 (239)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEEEECTT
T ss_pred EEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCeeeeccc
Confidence 357899999998421 02368899999999999999 99999999999988876554 233344444443221
Q ss_pred -------CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCcc
Q 041225 371 -------SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNS 443 (658)
Q Consensus 371 -------~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 443 (658)
+.+.++++++.+......... ... ..+. ..+..... . ...
T Consensus 82 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~--~~~-~~~~-------------~~~~~~~~---~--------------~~~ 128 (239)
T 1u02_A 82 SDRFLGVFDRIYEDTRSWVSDFPGLRIY--RKN-LAVL-------------YHLGLMGA---D--------------MKP 128 (239)
T ss_dssp GGGGHHHHHHHHHHHTTHHHHSTTCEEE--EET-TEEE-------------EECTTSCS---T--------------THH
T ss_pred ccccchhhHHHHHHHHHHHhhCCCcEEE--ecC-CEEE-------------EEcCCCCh---h--------------HHH
Confidence 122333333333321110000 000 0000 00000000 0 001
Q ss_pred HHHHHHHhhHH-hhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhc--ceeEEecCccchh
Q 041225 444 LVYILEKDLES-DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMA--DVGVGICGQEGRQ 520 (658)
Q Consensus 444 ~~~~~~~~~~~-~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A--~vgIam~~~~~~~ 520 (658)
....+...+.. .... +.+++.++++.+.+.+|+.+++.|+++- . |++||||.||++||+.| ++|||| +|+
T Consensus 129 ~~~~~~~~l~~~~~~~-~~~~~~~lei~~~~~~Kg~al~~l~~~~-g-via~GD~~ND~~Ml~~a~~g~~vam-~Na--- 201 (239)
T 1u02_A 129 KLRSRIEEIARIFGVE-TYYGKMIIELRVPGVNKGSAIRSVRGER-P-AIIAGDDATDEAAFEANDDALTIKV-GEG--- 201 (239)
T ss_dssp HHHHHHHHHHHHHTCE-EEECSSEEEEECTTCCHHHHHHHHHTTS-C-EEEEESSHHHHHHHHTTTTSEEEEE-SSS---
T ss_pred HHHHHHHHHhccCCcE-EEeCCcEEEEEcCCCCHHHHHHHHHhhC-C-eEEEeCCCccHHHHHHhhCCcEEEE-CCC---
Confidence 11122222222 1122 3456778999999999999999999983 3 99999999999999999 999999 555
Q ss_pred hhhhccccccc
Q 041225 521 AVMASDFAMGQ 531 (658)
Q Consensus 521 ~k~~AD~vl~~ 531 (658)
+..||+++.+
T Consensus 202 -~~~A~~v~~~ 211 (239)
T 1u02_A 202 -ETHAKFHVAD 211 (239)
T ss_dssp -CCCCSEEESS
T ss_pred -CCcceEEeCC
Confidence 5789998876
No 31
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=99.70 E-value=2.4e-17 Score=164.05 Aligned_cols=216 Identities=13% Similarity=0.134 Sum_probs=130.4
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH--------cCccCCCccEEEEcC-
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS--------CKLLTPDMQQIIING- 369 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~--------~gl~~~~~~~i~~~g- 369 (658)
.++++|+||||++. +..++++++++|++|+++ ++|+++|||++..+...... ..++..+|..++.++
T Consensus 14 kli~~DlDGTLl~~---~~~is~~~~~al~~l~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~NGa~i~~~~~ 89 (262)
T 2fue_A 14 VLCLFDVDGTLTPA---RQKIDPEVAAFLQKLRSR-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGR 89 (262)
T ss_dssp EEEEEESBTTTBST---TSCCCHHHHHHHHHHTTT-SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEETTE
T ss_pred EEEEEeCccCCCCC---CCcCCHHHHHHHHHHHhC-CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEECCCcEEEeCCe
Confidence 56789999999997 558999999999999999 99999999999877655432 123444555544332
Q ss_pred ----------CCHHHHHHHHHHHHHh-cCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEE
Q 041225 370 ----------NSEEECKDLLADAKAR-YGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALI 438 (658)
Q Consensus 370 ----------~~~~~~~~ii~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 438 (658)
.+.+.++++++.+.+. ........ ...+....... .. .............. ++...
T Consensus 90 ~i~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~---~~~~~ 156 (262)
T 2fue_A 90 LLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKK--RGTFIEFRNGM-----LN---ISPIGRSCTLEERI---EFSEL 156 (262)
T ss_dssp ECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCC--CSCSEEECSSC-----EE---ECSSCTTCCHHHHH---HHHHH
T ss_pred EEEEeeccccCCHHHHHHHHHHHHHcCceEEEEeC--CeEEEechHHh-----hh---HHhhcCCCcccccc---cEEEE
Confidence 2467788888776653 11111100 00000000000 00 00000000000000 00000
Q ss_pred EeCccHHHHHHHhhHHhh----hhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcc-e
Q 041225 439 IDGNSLVYILEKDLESDL----FDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMAD-V 509 (658)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~----~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A~-v 509 (658)
.........+.+.+...+ ..+..+++.++++.+.+++|+.+++.|...+.++|+|||| |.||++||+.|+ .
T Consensus 157 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~ 236 (262)
T 2fue_A 157 DKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTV 236 (262)
T ss_dssp HHHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSE
T ss_pred cCCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccC
Confidence 000111111112222222 2233345668999999999999999992227789999999 999999999999 5
Q ss_pred eEEecCccchhhhhhcccccccc
Q 041225 510 GVGICGQEGRQAVMASDFAMGQF 532 (658)
Q Consensus 510 gIam~~~~~~~~k~~AD~vl~~~ 532 (658)
|++| +|+.+.+|+.||+++.+.
T Consensus 237 g~av-~NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 237 GHSV-VSPQDTVQRCREIFFPET 258 (262)
T ss_dssp EEEC-SSHHHHHHHHHHHHCTTC
T ss_pred cEEe-cCCCHHHHHhhheeCCCC
Confidence 9999 888888999999998654
No 32
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=99.70 E-value=1.9e-18 Score=169.85 Aligned_cols=210 Identities=12% Similarity=0.095 Sum_probs=126.6
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH------cCccCCC-------ccEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS------CKLLTPD-------MQQI 365 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~------~gl~~~~-------~~~i 365 (658)
+++++|+||||++. +..++++++++|++|+++|++++++|||++......... ..++..+ ++++
T Consensus 5 kli~~DlDGTLl~~---~~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~~~i 81 (246)
T 3f9r_A 5 VLLLFDVDGTLTPP---RLCQTDEMRALIKRARGAGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNGLEI 81 (246)
T ss_dssp EEEEECSBTTTBST---TSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETTEEE
T ss_pred eEEEEeCcCCcCCC---CCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECCEEE
Confidence 45689999999997 558999999999999999999999999999865433221 0122233 3344
Q ss_pred EEcC----CCHHHHHHHHHHHHHhc-CcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEe
Q 041225 366 IING----NSEEECKDLLADAKARY-GVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIID 440 (658)
Q Consensus 366 ~~~g----~~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 440 (658)
+... .+.+.++++++...+.. ...... ....+...... ...+................ ..+
T Consensus 82 ~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~ 147 (246)
T 3f9r_A 82 HRQSLLNALGNDRIVKFVKKTLRLIADLDIPV--QRGTFVEYRNG--------MINVSPIGRNCSQAERDEFE----VYD 147 (246)
T ss_dssp EECCHHHHTCHHHHHHHHHHHHHHHHTCCCSC--CCSCCEEECSS--------CEEECSSCTTSCHHHHHHHH----HHH
T ss_pred EEeeccccCCHHHHHHHHHHHHhhhhceeeec--CCceEEEeecc--------eeccccccccCchhhceeee----Eec
Confidence 4444 34888888888766531 111110 00000000000 00000000000000000000 000
Q ss_pred Cc-cHHHHHHHhhHHhh----hhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcc-ee
Q 041225 441 GN-SLVYILEKDLESDL----FDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMAD-VG 510 (658)
Q Consensus 441 ~~-~~~~~~~~~~~~~~----~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A~-vg 510 (658)
.. .....+.+.+...+ ..+..+++.++++.+.+++|+.+++.|++ +.++|+|||| |.||++||+.|+ +|
T Consensus 148 ~~~~~~~~~~~~l~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g 226 (246)
T 3f9r_A 148 NEHRVRASLIAELENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIG 226 (246)
T ss_dssp HHHCHHHHHHHHHHHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEE
T ss_pred ccchHHHHHHHHHHhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccE
Confidence 10 01122223333333 23467888999999999999999999999 7899999999 699999999996 89
Q ss_pred EEecCccchhhhhhccc
Q 041225 511 VGICGQEGRQAVMASDF 527 (658)
Q Consensus 511 Iam~~~~~~~~k~~AD~ 527 (658)
++| +|+.+.+|..+.+
T Consensus 227 ~~v-~n~~~~~~~~~~~ 242 (246)
T 3f9r_A 227 HKV-TSYKDTIAEVEKI 242 (246)
T ss_dssp EEC-SSHHHHHHHHHHH
T ss_pred EEe-CCHHHHHHHHHHH
Confidence 999 6666666665544
No 33
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=99.69 E-value=2.8e-18 Score=157.02 Aligned_cols=127 Identities=23% Similarity=0.260 Sum_probs=99.7
Q ss_pred CChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhh
Q 041225 156 ESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILA 235 (658)
Q Consensus 156 ~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~ 235 (658)
.+|+|.||++++...+.. .....|+++..+||+|.|||||++++.+++.+.+|+|||||.|+++|+
T Consensus 33 ~n~~d~Ail~~~~~~~~~--------------~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~ 98 (170)
T 3gwi_A 33 KNLLDTAVLEGTDEESAR--------------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCS 98 (170)
T ss_dssp CCHHHHHHHHTSCHHHHH--------------HHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEE
T ss_pred CChHHHHHHHHHHhcChh--------------hhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhH
Confidence 499999999987542210 012246788999999999999999998888899999999999999998
Q ss_pred cCc------cccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhcccee
Q 041225 236 KDS------KRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTL 309 (658)
Q Consensus 236 ~~~------~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTl 309 (658)
... ..++..++.+.+.++.|+.+|+|||++|+|.++..+.. .....|.|+||
T Consensus 99 ~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~----------------------~~~~~E~~L~f 156 (170)
T 3gwi_A 99 QVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD----------------------YQRADESDLIL 156 (170)
T ss_dssp EEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC----------------------CCGGGSCSEEE
T ss_pred HHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc----------------------cCccccCCcEE
Confidence 532 24567788999999999999999999999998654210 00124789999
Q ss_pred eeccccccc
Q 041225 310 LGATGIEDK 318 (658)
Q Consensus 310 lg~~~~~d~ 318 (658)
+|.+|+-|.
T Consensus 157 ~G~~g~~~~ 165 (170)
T 3gwi_A 157 EGYIAFLDH 165 (170)
T ss_dssp EEEEEEEC-
T ss_pred Eehhccccc
Confidence 999997654
No 34
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=99.69 E-value=9e-17 Score=156.80 Aligned_cols=192 Identities=17% Similarity=0.170 Sum_probs=129.5
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC---------
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN--------- 370 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~--------- 370 (658)
++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+|+..+ .+..||.
T Consensus 5 li~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~---~i~~nGa~i~~~~~~~ 78 (231)
T 1wr8_A 5 AISIDIDGTITYP---NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP---VVAEDGGAISYKKKRI 78 (231)
T ss_dssp EEEEESTTTTBCT---TSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC---EEEGGGTEEEETTEEE
T ss_pred EEEEECCCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCe---EEEeCCcEEEeCCEEE
Confidence 4678999999997 558999999999999999999999999999999999888876321 2332321
Q ss_pred ---CHHHHHHHHHHHHHhc-CcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHH
Q 041225 371 ---SEEECKDLLADAKARY-GVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVY 446 (658)
Q Consensus 371 ---~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 446 (658)
..+.++++++.++..+ +..... . .. + ....+. +........
T Consensus 79 ~~~~l~~~~~i~~~~~~~~~~~~~~~---~-------~~-----------~-------------~~~~~~-~~~~~~~~~ 123 (231)
T 1wr8_A 79 FLASMDEEWILWNEIRKRFPNARTSY---T-------MP-----------D-------------RRAGLV-IMRETINVE 123 (231)
T ss_dssp ESCCCSHHHHHHHHHHHHCTTCCBCT---T-------GG-----------G-------------CSSCEE-ECTTTSCHH
T ss_pred EeccHHHHHHHHHHHHHhCCCceEEe---c-------CC-----------C-------------ceeeEE-EECCCCCHH
Confidence 0055666666655222 211100 0 00 0 000111 122010111
Q ss_pred HHHHhhHH--hhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhh
Q 041225 447 ILEKDLES--DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQA 521 (658)
Q Consensus 447 ~~~~~~~~--~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~ 521 (658)
.....++. ....+. +++..+++.+.+.+|+.+++.++++ +++++++|||+.||++|++.||+||+| +++.+.+
T Consensus 124 ~~~~~~~~~~~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~~~~~~~ 201 (231)
T 1wr8_A 124 TVREIINELNLNLVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV-AQAPKIL 201 (231)
T ss_dssp HHHHHHHHTTCSCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHH
T ss_pred HHHHHHHhcCCcEEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe-cCCCHHH
Confidence 11111111 113334 5566789999999999999999886 567899999999999999999999999 5566678
Q ss_pred hhhcccccccccc
Q 041225 522 VMASDFAMGQFRF 534 (658)
Q Consensus 522 k~~AD~vl~~~~~ 534 (658)
+..||+++.+...
T Consensus 202 ~~~a~~v~~~~~e 214 (231)
T 1wr8_A 202 KENADYVTKKEYG 214 (231)
T ss_dssp HTTCSEECSSCHH
T ss_pred HhhCCEEecCCCc
Confidence 8899999877654
No 35
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=99.68 E-value=2.2e-16 Score=156.98 Aligned_cols=206 Identities=16% Similarity=0.149 Sum_probs=130.4
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc----cCCCcc-------------
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL----LTPDMQ------------- 363 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl----~~~~~~------------- 363 (658)
+++|+||||++. . .+.+.+.++|++++++|++++++|||++..+. .+|+ +..++.
T Consensus 3 i~~DlDGTLl~~---~-~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~----~l~~~~~~i~~nGa~i~~~~~~~~~~~ 74 (259)
T 3zx4_A 3 VFTDLDGTLLDE---R-GELGPAREALERLRALGVPVVPVTAKTRKEVE----ALGLEPPFIVENGGGLYLPRDWPVRAG 74 (259)
T ss_dssp EEECCCCCCSCS---S-SSCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH----HTTCCSSEEEGGGTEEEEETTCSSCCS
T ss_pred EEEeCCCCCcCC---C-cCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH----HcCCCCcEEEECCcEEEeCCCCccccc
Confidence 468999999997 4 78999999999999999999999999998877 5554 222222
Q ss_pred ------EEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEE
Q 041225 364 ------QIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLAL 437 (658)
Q Consensus 364 ------~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 437 (658)
.+.....+.+.+.++++.+.+.++....... ... ........ ...... ... .........+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~---~~~~~~~~---~~~~~~----~~~-~~~~~~~~~~ 141 (259)
T 3zx4_A 75 RPKGGYRVVSLAWPYRKVRARLREAEALAGRPILGYG--DLT---AEAVARLT---GLSREA----ARR-AKAREYDETL 141 (259)
T ss_dssp EEETTEEEEECSCCHHHHHHHHHHHHHHHTSCCCBGG--GBC---HHHHHHHH---CCCHHH----HHH-HTCCSSCEEB
T ss_pred ccCCceEEEEcCCCHHHHHHHHHHHHHhcCceEEEcC--CCC---HHHHHHHc---CCCHHH----hhh-hhccccceeE
Confidence 4445566788899999888764433221111 100 00110000 000000 000 0000001111
Q ss_pred EEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CC--CeEEEEcCCcCChhhhhhcceeEE
Q 041225 438 IIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TD--DMTLAIGDGANDVSMIQMADVGVG 512 (658)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~--~~v~aiGDg~NDi~Ml~~A~vgIa 512 (658)
....+ ....+.+.+......++.+. .++++.+. .+|+.+++.++++ +. +++++|||+.||++|++.||+|||
T Consensus 142 ~~~~~-~~~~~~~~l~~~~~~~~~s~-~~~ei~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va 218 (259)
T 3zx4_A 142 VLCPE-EVEAVLEALEAVGLEWTHGG-RFYHAAKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVY 218 (259)
T ss_dssp CCCTT-THHHHHHHHHHTTCEEEECS-SSEEEESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEE
T ss_pred EeCcH-HHHHHHHHHHHCCcEEEecC-ceEEEcCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEE
Confidence 11223 33444444444334444444 35699998 9999999999988 34 889999999999999999999999
Q ss_pred ecCccchhhhhhcccccccccc
Q 041225 513 ICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 513 m~~~~~~~~k~~AD~vl~~~~~ 534 (658)
| +|+.+ + .|+++..+...
T Consensus 219 ~-~na~~-~--~~~~~~~~~~~ 236 (259)
T 3zx4_A 219 V-GRGDP-P--EGVLATPAPGP 236 (259)
T ss_dssp C-SSSCC-C--TTCEECSSCHH
T ss_pred e-CChhh-c--CCcEEeCCCCc
Confidence 9 55554 4 67788766543
No 36
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=99.67 E-value=1.2e-16 Score=157.24 Aligned_cols=203 Identities=13% Similarity=0.129 Sum_probs=126.6
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC--------C
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN--------S 371 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~--------~ 371 (658)
++++|+||||++.- ..+ +.+.++|++++ +|++|+++|||++..+..+.+.+++..+ +.+|..||. +
T Consensus 5 li~~DlDGTLl~~~---~~~-~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~-~~~I~~NGa~i~~~~~~~ 78 (244)
T 1s2o_A 5 LLISDLDNTWVGDQ---QAL-EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEP-DYWLTAVGSEIYHPEGLD 78 (244)
T ss_dssp EEEECTBTTTBSCH---HHH-HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCC-SEEEETTTTEEEETTEEC
T ss_pred EEEEeCCCCCcCCH---HHH-HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCC-CEEEECCCcEEEeCCCcC
Confidence 45789999999852 233 57778888855 6899999999999999999998776422 335555554 2
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccH---HHHH
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSL---VYIL 448 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~ 448 (658)
......+ ...+ . ........... ...... .. ...+..++.+....... ...+
T Consensus 79 ~~~~~~~----~~~~--------------~-~~~~~~~~~~~----~~~~~~-~~-~~~~~~ki~~~~~~~~~~~~~~~l 133 (244)
T 1s2o_A 79 QHWADYL----SEHW--------------Q-RDILQAIADGF----EALKPQ-SP-LEQNPWKISYHLDPQACPTVIDQL 133 (244)
T ss_dssp HHHHHHH----HTTC--------------C-HHHHHHHHHTC----TTEEEC-CG-GGCBTTBEEEEECTTSCTHHHHHH
T ss_pred hHHHHHH----hccc--------------c-HHHHHHHHHhc----cCcccc-Cc-ccCCCeEEEEEeChhhHHHHHHHH
Confidence 2211111 0000 0 00001111000 000000 00 01223445554443322 2222
Q ss_pred HHhhHHh--hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhh
Q 041225 449 EKDLESD--LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVM 523 (658)
Q Consensus 449 ~~~~~~~--~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~ 523 (658)
.+.+... ...+..+.+.++++.+.+++|+.+++.++++ +.+++++|||+.||++|++.|++||+| +++.+.+++
T Consensus 134 ~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~-~na~~~~k~ 212 (244)
T 1s2o_A 134 TEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV-RNAQPELLH 212 (244)
T ss_dssp HHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC-TTCCHHHHH
T ss_pred HHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEE-cCCcHHHHH
Confidence 2222211 1334456677899999999999999999987 557899999999999999999999999 667777888
Q ss_pred h-------cccccccccc
Q 041225 524 A-------SDFAMGQFRF 534 (658)
Q Consensus 524 ~-------AD~vl~~~~~ 534 (658)
. ||+++.+...
T Consensus 213 ~a~~~~~~a~~v~~~~~~ 230 (244)
T 1s2o_A 213 WYDQWGDSRHYRAQSSHA 230 (244)
T ss_dssp HHHHHCCTTEEECSSCHH
T ss_pred HHhcccccceeecCCcch
Confidence 5 7898876654
No 37
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=99.67 E-value=4.4e-17 Score=160.70 Aligned_cols=211 Identities=13% Similarity=0.123 Sum_probs=124.1
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHH-H----c-CccCCCccEE-------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIAL-S----C-KLLTPDMQQI------- 365 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~-~----~-gl~~~~~~~i------- 365 (658)
+++++|+||||++. +..++++++++|++|+++ ++|+++|||++..+..... . . .++..+|..+
T Consensus 7 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~~~~i 82 (246)
T 2amy_A 7 ALCLFDVDGTLTAP---RQKITKEMDDFLQKLRQK-IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDGKLL 82 (246)
T ss_dssp EEEEEESBTTTBCT---TSCCCHHHHHHHHHHTTT-SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETTEEE
T ss_pred eEEEEECCCCcCCC---CcccCHHHHHHHHHHHhC-CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeCCcEE
Confidence 45789999999997 558999999999999999 9999999999876443322 0 1 2333444333
Q ss_pred EEcC----CCHHHHHHHHHHHHHh---cCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEE
Q 041225 366 IING----NSEEECKDLLADAKAR---YGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALI 438 (658)
Q Consensus 366 ~~~g----~~~~~~~~ii~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 438 (658)
+... .+.+.++++++.+.+. +........+ ....... .....+. ......... ++...
T Consensus 83 ~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~---~~~~~~~~~---~~~~~ 147 (246)
T 2amy_A 83 CRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTF----IEFRNGM-----LNVSPIG---RSCSQEERI---EFYEL 147 (246)
T ss_dssp EECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCS----EEEETTE-----EEECSSC---TTCCHHHHH---HHHHH
T ss_pred EeeecccccCHHHHHHHHHHHHhcCceEEEecCCcee----Eecccce-----eehhhhc---CcCchhhhh---hheee
Confidence 3333 2678888888877653 1111110000 0000000 0000000 000000000 00000
Q ss_pred EeCccHHHHHHHhhHHhh----hhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcce-
Q 041225 439 IDGNSLVYILEKDLESDL----FDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMADV- 509 (658)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~----~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A~v- 509 (658)
.........+.+.+...+ ..+..+++.++++.+.+++|+.+++.|...+.++|+|||| |.||++||+.|+.
T Consensus 148 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~a 227 (246)
T 2amy_A 148 DKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTM 227 (246)
T ss_dssp HHHHCHHHHHHHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcc
Confidence 000111111112222222 2233345678999999999999999992227789999999 9999999999998
Q ss_pred eEEecCccchhhhhhccccc
Q 041225 510 GVGICGQEGRQAVMASDFAM 529 (658)
Q Consensus 510 gIam~~~~~~~~k~~AD~vl 529 (658)
|++| +|+.+.+|+.||+|.
T Consensus 228 g~av-~Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 228 GYSV-TAPEDTRRICELLFS 246 (246)
T ss_dssp EEEC-SSHHHHHHHHHHHCC
T ss_pred eEEe-eCCCHHHHHHHhhcC
Confidence 9999 778888999999873
No 38
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=99.64 E-value=4.8e-16 Score=157.70 Aligned_cols=144 Identities=13% Similarity=0.086 Sum_probs=99.0
Q ss_pred ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccc
Q 041225 316 EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTK 395 (658)
Q Consensus 316 ~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~ 395 (658)
..+++|++.++++.|+++|+++.|+||+...++.++++++|+...+..++. +.... ..
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~-n~l~~------------------~~--- 196 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVS-NFMDF------------------DE--- 196 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEE-ECEEE------------------CT---
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEe-eeEEE------------------cc---
Confidence 458999999999999999999999999999999999999998655432221 11000 00
Q ss_pred ccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCccc
Q 041225 396 CNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475 (658)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~ 475 (658)
........++. ...+....|.+
T Consensus 197 -------------------------------------~~~~~~~~~~~---------------------i~~~~k~~~~~ 218 (297)
T 4fe3_A 197 -------------------------------------NGVLKGFKGEL---------------------IHVFNKHDGAL 218 (297)
T ss_dssp -------------------------------------TSBEEEECSSC---------------------CCTTCHHHHHH
T ss_pred -------------------------------------cceeEeccccc---------------------cchhhcccHHH
Confidence 00000000000 00122233445
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCcCChhhhh---hcceeEEecC------ccchhhhhhcccccccccchHHHHh
Q 041225 476 KAGIVDLIKSRTDDMTLAIGDGANDVSMIQ---MADVGVGICG------QEGRQAVMASDFAMGQFRFLKRLLL 540 (658)
Q Consensus 476 K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~---~A~vgIam~~------~~~~~~k~~AD~vl~~~~~l~~l~l 540 (658)
|...+..+++. +..|+++|||.||+||++ .|++||+|.- +..+.++++||+|+.++++...+..
T Consensus 219 k~~~~~~~~~~-~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 219 KNTDYFSQLKD-NSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp TCHHHHHHTTT-CCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred HHHHHHHhhcc-CCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 66666666655 678999999999999955 8999999931 4555679999999999999877643
No 39
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=99.49 E-value=3.1e-14 Score=132.89 Aligned_cols=150 Identities=13% Similarity=0.055 Sum_probs=110.2
Q ss_pred HHHhhhccceeeeccccc-------cccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGATGIE-------DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~-------d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
..+++|+||||+.....- ..+.+++.++|++|+++|++++++||++...+..+++.+|+...
T Consensus 9 k~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~----------- 77 (180)
T 1k1e_A 9 KFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF----------- 77 (180)
T ss_dssp CEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE-----------
T ss_pred eEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee-----------
Confidence 456799999999752110 13556788999999999999999999999999999998887310
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 78 -------------------------------------------------------------------------------- 77 (180)
T 1k1e_A 78 -------------------------------------------------------------------------------- 77 (180)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
+ .....|..+++.+++. +++++++|||+.||++|++.||++++| +++.+.++..||++
T Consensus 78 ----------------~--~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~~~~~ad~v 138 (180)
T 1k1e_A 78 ----------------F--LGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV-ADAPIYVKNAVDHV 138 (180)
T ss_dssp ----------------E--ESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHTTSSEE
T ss_pred ----------------e--cCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe-CCccHHHHhhCCEE
Confidence 0 0125688888877765 457899999999999999999999999 55666688999999
Q ss_pred cccccchHHH-----HhhhhhhHHHHHHHHHHHHH
Q 041225 529 MGQFRFLKRL-----LLVHGHWNYQRIGYLVLYNF 558 (658)
Q Consensus 529 l~~~~~l~~l-----~l~~gr~~~~~~~~~i~~~~ 558 (658)
+.+.+....+ .+...|..+.++...+.|.+
T Consensus 139 ~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 139 LSTHGGKGAFREMSDMILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp CSSCTTTTHHHHHHHHHHHHTTCTHHHHCHHHHHH
T ss_pred ecCCCCCcHHHHHHHHHHHhcCchhhhhhccchhh
Confidence 9876432222 11234445666655555543
No 40
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=99.48 E-value=2.3e-13 Score=137.36 Aligned_cols=198 Identities=13% Similarity=0.086 Sum_probs=127.6
Q ss_pred HHhhhccceeeeccccccccCCChHHHHH--------HHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEE-----
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIE--------ALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQII----- 366 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~--------~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~----- 366 (658)
.+++|+||||++. .+.+.+..++. .+++.|++++++|||+...+..+...+|+......++.
T Consensus 24 liifDlDGTLlds-----~i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~~g~~ 98 (289)
T 3gyg_A 24 IVFCDFDETYFPH-----TIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASDLGTE 98 (289)
T ss_dssp EEEEETBTTTBCS-----SCCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEETTTTE
T ss_pred EEEEECCCCCcCC-----CCCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeecCCce
Confidence 4679999999996 27888888888 66789999999999999999999999887433222221
Q ss_pred --E---cC---------------CCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCch
Q 041225 367 --I---NG---------------NSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDV 426 (658)
Q Consensus 367 --~---~g---------------~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (658)
. +| .+.+.+.++++.+++.++...........
T Consensus 99 i~~~~~ng~~~~~~~~~~~~~~~~~~~~v~e~l~~l~~~~g~~l~~~t~~~~---------------------------- 150 (289)
T 3gyg_A 99 ITYFSEHNFGQQDNKWNSRINEGFSKEKVEKLVKQLHENHNILLNPQTQLGK---------------------------- 150 (289)
T ss_dssp EEECCSSSTTEECHHHHHHHHTTCCHHHHHHHHHHHHHHSSCCCEEGGGTCG----------------------------
T ss_pred EEEEcCCCcEeecCchhhhhcccCCHHHHHHHHHHHHhhhCceeeecccccc----------------------------
Confidence 1 22 23455666666665543221111000000
Q ss_pred hhhhccCcEEEEEeCcc------HHHHHHHhhHHhhhh--hhcc--------CCeeEEEEcCcccHHHHHHHHHhc---C
Q 041225 427 KEVAAIASLALIIDGNS------LVYILEKDLESDLFD--LATS--------CRVVLCCRVAPLQKAGIVDLIKSR---T 487 (658)
Q Consensus 427 ~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~--i~~s--------~~~~i~~~~~~~~K~~~v~~L~~~---~ 487 (658)
............. ....+...+...... +..+ ....+++.+.+.+|+.+++.+++. +
T Consensus 151 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 226 (289)
T 3gyg_A 151 ----SRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLN 226 (289)
T ss_dssp ----GGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHTCC
T ss_pred ----cceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcCCC
Confidence 0000001111110 111112222221111 1112 125688889999999999999987 5
Q ss_pred CCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccch
Q 041225 488 DDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFL 535 (658)
Q Consensus 488 ~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l 535 (658)
++++++|||+.||++|++.||+||+| +++...++..||+++.+...-
T Consensus 227 ~~~~~~~GDs~~D~~~~~~ag~~~~~-~~~~~~~~~~a~~v~~~~~~~ 273 (289)
T 3gyg_A 227 TERAIAFGDSGNDVRMLQTVGNGYLL-KNATQEAKNLHNLITDSEYSK 273 (289)
T ss_dssp GGGEEEEECSGGGHHHHTTSSEEEEC-TTCCHHHHHHCCCBCSSCHHH
T ss_pred hhhEEEEcCCHHHHHHHHhCCcEEEE-CCccHHHHHhCCEEcCCCCcC
Confidence 67899999999999999999999999 667777899999998776543
No 41
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.45 E-value=4.2e-14 Score=133.04 Aligned_cols=152 Identities=13% Similarity=0.070 Sum_probs=110.3
Q ss_pred HHHhhhccceeeeccccccccCC-------ChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGATGIEDKLQD-------GVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~-------~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
..+++|+||||+.....-..... ....+|+.|+++|++++++||++...+..+++.+|+...
T Consensus 20 k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~----------- 88 (189)
T 3mn1_A 20 KLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQGIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHL----------- 88 (189)
T ss_dssp CEEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEE-----------
T ss_pred CEEEEcCCCCcCCccEeeccCCcEeeeeccccHHHHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHH-----------
Confidence 45788999999985321111100 111389999999999999999999999999999987321
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 89 -------------------------------------------------------------------------------- 88 (189)
T 3mn1_A 89 -------------------------------------------------------------------------------- 88 (189)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
.....+|..+++.+++. +++++++|||+.||++|++.||+++++ +++...++..||++
T Consensus 89 ------------------f~~~~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~-~~~~~~~~~~ad~v 149 (189)
T 3mn1_A 89 ------------------FQGREDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAV-ANAASFVREHAHGI 149 (189)
T ss_dssp ------------------ECSCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHTSSEE
T ss_pred ------------------hcCcCChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEe-CCccHHHHHhCCEE
Confidence 00115788888888776 568899999999999999999999999 55666789999999
Q ss_pred cccccc------hHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 041225 529 MGQFRF------LKRLLLVHGHWNYQRIGYLVLYNFYRN 561 (658)
Q Consensus 529 l~~~~~------l~~l~l~~gr~~~~~~~~~i~~~~~~~ 561 (658)
+.+.+. +..+ +...|..+.++.+.+.|.+..|
T Consensus 150 ~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 150 TRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp CSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC---
T ss_pred ecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhcccccc
Confidence 887532 2222 2356777778777766655443
No 42
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=99.45 E-value=9.4e-14 Score=127.13 Aligned_cols=60 Identities=12% Similarity=0.022 Sum_probs=52.4
Q ss_pred cccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccccccc
Q 041225 473 PLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFR 533 (658)
Q Consensus 473 ~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~ 533 (658)
+.+|..+++.++++ +++++++|||+.||++|++.||++++| +++.+.+++.||+++.+..
T Consensus 81 ~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~-~na~~~~k~~Ad~v~~~~~ 143 (168)
T 3ewi_A 81 VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVP-ADACSGAQKAVGYICKCSG 143 (168)
T ss_dssp CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEEC-TTCCHHHHTTCSEECSSCT
T ss_pred CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEe-CChhHHHHHhCCEEeCCCC
Confidence 35799999988876 568999999999999999999999999 6677789999999987653
No 43
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=99.44 E-value=7.9e-14 Score=131.36 Aligned_cols=125 Identities=13% Similarity=0.067 Sum_probs=98.1
Q ss_pred HHHhhhccceeeeccccccccCCC-------hHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDG-------VPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~-------~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
..+++|+||||++.....+...++ ...+|+.|+++|++++|+||++...+..+++.+|+...
T Consensus 26 k~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~----------- 94 (195)
T 3n07_A 26 KLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKALGISLI----------- 94 (195)
T ss_dssp CEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEE-----------
T ss_pred CEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEE-----------
Confidence 456789999999832222222233 34459999999999999999999999999999987310
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 95 -------------------------------------------------------------------------------- 94 (195)
T 3n07_A 95 -------------------------------------------------------------------------------- 94 (195)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
......|..+++.+++. +++++++|||+.||++|++.||++++| +++.+.++..||++
T Consensus 95 ------------------~~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~-~na~~~~~~~ad~v 155 (195)
T 3n07_A 95 ------------------YQGQDDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCV-ADGHPLLAQRANYV 155 (195)
T ss_dssp ------------------ECSCSSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCHHHHHHCSEE
T ss_pred ------------------eeCCCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEE-CChHHHHHHhCCEE
Confidence 01125788888888876 568999999999999999999999999 56667799999999
Q ss_pred ccccc
Q 041225 529 MGQFR 533 (658)
Q Consensus 529 l~~~~ 533 (658)
+.+..
T Consensus 156 ~~~~~ 160 (195)
T 3n07_A 156 THIKG 160 (195)
T ss_dssp CSSCT
T ss_pred EcCCC
Confidence 87653
No 44
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=99.39 E-value=2.2e-13 Score=126.50 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=95.1
Q ss_pred HHHhhhccceeeeccccccccCCChH-------HHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVP-------EAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~-------~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
..+++|+||||+.....-....+... .+|+.|+++|++++++||++...+..+++.+|+.
T Consensus 13 k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------- 79 (176)
T 3mmz_A 13 DAVVLDFDGTQTDDRVLIDSDGREFVSVHRGDGLGIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------- 79 (176)
T ss_dssp SEEEECCTTTTSCSCCEECTTCCEEEEEEHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------
T ss_pred CEEEEeCCCCcCcCCEeecCCccHhHhcccccHHHHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------
Confidence 34679999999983221111111111 2499999999999999999999999999998872
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 80 -------------------------------------------------------------------------------- 79 (176)
T 3mmz_A 80 -------------------------------------------------------------------------------- 79 (176)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
+......|..+++.+++. +++++++|||+.||++|++.||++++| +++.+.++..||++
T Consensus 80 -----------------~~~~~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~-~~~~~~~~~~ad~v 141 (176)
T 3mmz_A 80 -----------------VLHGIDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV-ASAHDVVRGAARAV 141 (176)
T ss_dssp -----------------EEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHHHHHHSSEE
T ss_pred -----------------eEeCCCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC-CChhHHHHHhCCEE
Confidence 001125788888888876 467899999999999999999999999 55666789999999
Q ss_pred ccccc
Q 041225 529 MGQFR 533 (658)
Q Consensus 529 l~~~~ 533 (658)
+.+.+
T Consensus 142 ~~~~~ 146 (176)
T 3mmz_A 142 TTVPG 146 (176)
T ss_dssp CSSCT
T ss_pred ecCCC
Confidence 98743
No 45
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=99.31 E-value=2.4e-12 Score=121.08 Aligned_cols=125 Identities=18% Similarity=0.184 Sum_probs=95.9
Q ss_pred HHHhhhccceeeeccccccccCCChHHH-------HHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEA-------IEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~a-------I~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
..+++|.||||.......++..+...+. |+.|+++|++++++||++...+..+++.+|+...
T Consensus 20 k~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~----------- 88 (191)
T 3n1u_A 20 KCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHY----------- 88 (191)
T ss_dssp SEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEE-----------
T ss_pred CEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccc-----------
Confidence 4568899999988332222333444455 9999999999999999999999999999887321
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 89 -------------------------------------------------------------------------------- 88 (191)
T 3n1u_A 89 -------------------------------------------------------------------------------- 88 (191)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
+. ....|..+++.+.+. +++++++|||+.||++|++.||++++| +++.+.++..||++
T Consensus 89 ----------------~~--~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~~~~~ad~v 149 (191)
T 3n1u_A 89 ----------------YK--GQVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV-SNAVPQVLEFADWR 149 (191)
T ss_dssp ----------------EC--SCSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHHHHHHSSEE
T ss_pred ----------------ee--CCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe-CCccHHHHHhCCEE
Confidence 00 003466666666654 567899999999999999999999999 55666789999999
Q ss_pred ccccc
Q 041225 529 MGQFR 533 (658)
Q Consensus 529 l~~~~ 533 (658)
+.+..
T Consensus 150 ~~~~~ 154 (191)
T 3n1u_A 150 TERTG 154 (191)
T ss_dssp CSSCT
T ss_pred ecCCC
Confidence 98754
No 46
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=99.29 E-value=3.6e-12 Score=121.53 Aligned_cols=124 Identities=11% Similarity=0.051 Sum_probs=94.7
Q ss_pred HHhhhccceeeeccccccc-------cCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCH
Q 041225 300 AALIECDLTLLGATGIEDK-------LQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSE 372 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~-------l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~ 372 (658)
.+.+|+||||++....-.. .......+|+.|+++|+++.++||++...+..+++.+|+...
T Consensus 51 ~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~------------ 118 (211)
T 3ij5_A 51 LLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYGIRCLITSDIDVAIITGRRAKLLEDRANTLGITHL------------ 118 (211)
T ss_dssp EEEECCTTTTSSSEEEEETTSCEEEEEEHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEE------------
T ss_pred EEEEeCCCCEECCHHHHhhhhHHHHHhccchHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchh------------
Confidence 4678999998864321100 000111279999999999999999999999999999987311
Q ss_pred HHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhh
Q 041225 373 EECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDL 452 (658)
Q Consensus 373 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 452 (658)
T Consensus 119 -------------------------------------------------------------------------------- 118 (211)
T 3ij5_A 119 -------------------------------------------------------------------------------- 118 (211)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccc
Q 041225 453 ESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAM 529 (658)
Q Consensus 453 ~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl 529 (658)
+. ....|..+++.+++. +++++++|||+.||++|++.||++++| +++.+.++..||+++
T Consensus 119 ---------------f~--~~k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~-~~~~~~~~~~Ad~v~ 180 (211)
T 3ij5_A 119 ---------------YQ--GQSDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAV-ADAHPLLLPKAHYVT 180 (211)
T ss_dssp ---------------EC--SCSSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC-TTSCTTTGGGSSEEC
T ss_pred ---------------hc--ccCChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEe-CCccHHHHhhCCEEE
Confidence 00 015788888888776 578999999999999999999999999 556667899999998
Q ss_pred cccc
Q 041225 530 GQFR 533 (658)
Q Consensus 530 ~~~~ 533 (658)
.+..
T Consensus 181 ~~~~ 184 (211)
T 3ij5_A 181 RIKG 184 (211)
T ss_dssp SSCT
T ss_pred eCCC
Confidence 7663
No 47
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=99.28 E-value=2.6e-12 Score=117.75 Aligned_cols=124 Identities=16% Similarity=0.066 Sum_probs=94.7
Q ss_pred HHhhhccceeeeccccccccC-------CChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCH
Q 041225 300 AALIECDLTLLGATGIEDKLQ-------DGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSE 372 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~-------~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~ 372 (658)
.+++|.||||+.....-.... .....+++.|+++|++++++||++...+..+++.+|+...
T Consensus 6 ~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------------ 73 (164)
T 3e8m_A 6 LILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------------ 73 (164)
T ss_dssp EEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------------
T ss_pred EEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------------
Confidence 357899999998421111111 1233459999999999999999999999999999887321
Q ss_pred HHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhh
Q 041225 373 EECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDL 452 (658)
Q Consensus 373 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 452 (658)
T Consensus 74 -------------------------------------------------------------------------------- 73 (164)
T 3e8m_A 74 -------------------------------------------------------------------------------- 73 (164)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccc
Q 041225 453 ESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAM 529 (658)
Q Consensus 453 ~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl 529 (658)
......|..+++.+.+. +++++++|||+.||++|++.||+++++ +++.+.+++.||+++
T Consensus 74 -----------------~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~~~~~ad~v~ 135 (164)
T 3e8m_A 74 -----------------FQGVVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP-ASAPFYIRRLSTIFL 135 (164)
T ss_dssp -----------------ECSCSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC-TTSCHHHHTTCSSCC
T ss_pred -----------------ecccCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc-CChHHHHHHhCcEEe
Confidence 00124677777777765 567899999999999999999999999 556667899999999
Q ss_pred cccc
Q 041225 530 GQFR 533 (658)
Q Consensus 530 ~~~~ 533 (658)
.+.+
T Consensus 136 ~~~~ 139 (164)
T 3e8m_A 136 EKRG 139 (164)
T ss_dssp CCCT
T ss_pred ccCC
Confidence 8755
No 48
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=99.21 E-value=1.5e-11 Score=115.33 Aligned_cols=124 Identities=11% Similarity=0.092 Sum_probs=92.5
Q ss_pred HHHhhhccceeeeccc-ccc------ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGATG-IED------KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~-~~d------~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
..+++|.||||+.... +.. .+......+|++|+++|++++++||++...+..+++.+|+...
T Consensus 27 k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~----------- 95 (188)
T 2r8e_A 27 RLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL----------- 95 (188)
T ss_dssp SEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE-----------
T ss_pred CEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee-----------
Confidence 3467899999996311 000 1111123479999999999999999999999999988886210
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 96 -------------------------------------------------------------------------------- 95 (188)
T 2r8e_A 96 -------------------------------------------------------------------------------- 95 (188)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
...+..|..+++.+.+. +++++++|||+.||++|++.||+++++ +++...++..||++
T Consensus 96 ------------------~~~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~-~~~~~~~~~~ad~v 156 (188)
T 2r8e_A 96 ------------------YQGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAV-ADAHPLLIPRADYV 156 (188)
T ss_dssp ------------------ECSCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCTTTGGGSSEE
T ss_pred ------------------ecCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEe-cCcCHHHHhcCCEE
Confidence 01134567777777665 457899999999999999999999999 44555678889999
Q ss_pred cccc
Q 041225 529 MGQF 532 (658)
Q Consensus 529 l~~~ 532 (658)
+.+.
T Consensus 157 ~~~~ 160 (188)
T 2r8e_A 157 TRIA 160 (188)
T ss_dssp CSSC
T ss_pred EeCC
Confidence 9887
No 49
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=99.19 E-value=1.1e-11 Score=113.22 Aligned_cols=127 Identities=15% Similarity=0.126 Sum_probs=95.1
Q ss_pred HHHHhhhccceeeecccc-------ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC
Q 041225 298 QTAALIECDLTLLGATGI-------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN 370 (658)
Q Consensus 298 ~~~~~~d~DgTllg~~~~-------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~ 370 (658)
...+++|+||||+..... -..+++++.++|+.|+++|++++++||++...+..+.+.+|+...
T Consensus 9 ~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~---------- 78 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI---------- 78 (162)
T ss_dssp CCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE----------
T ss_pred eeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh----------
Confidence 356789999999963211 112355678999999999999999999999999999998886210
Q ss_pred CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHH
Q 041225 371 SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEK 450 (658)
Q Consensus 371 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 450 (658)
T Consensus 79 -------------------------------------------------------------------------------- 78 (162)
T 2p9j_A 79 -------------------------------------------------------------------------------- 78 (162)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccc
Q 041225 451 DLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDF 527 (658)
Q Consensus 451 ~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~ 527 (658)
+. .+..|..+++.+.+. +++++++|||+.||++|.+.||+++++ .++....+..||+
T Consensus 79 ----------------~~---~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~-~~~~~~~~~~a~~ 138 (162)
T 2p9j_A 79 ----------------YT---GSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAV-RNAVEEVRKVAVY 138 (162)
T ss_dssp ----------------EE---CC--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSE
T ss_pred ----------------cc---CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEe-cCccHHHHhhCCE
Confidence 00 023355555555443 567899999999999999999999998 4445567888999
Q ss_pred ccccccc
Q 041225 528 AMGQFRF 534 (658)
Q Consensus 528 vl~~~~~ 534 (658)
++.+...
T Consensus 139 v~~~~~~ 145 (162)
T 2p9j_A 139 ITQRNGG 145 (162)
T ss_dssp ECSSCSS
T ss_pred EecCCCC
Confidence 9987765
No 50
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.19 E-value=4.2e-12 Score=126.41 Aligned_cols=67 Identities=15% Similarity=0.178 Sum_probs=54.2
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec---CChhHHHHHHHHcCccCCCccEEEEcC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG---DKQDTAISIALSCKLLTPDMQQIIING 369 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG---r~~~~a~~ia~~~gl~~~~~~~i~~~g 369 (658)
+.+++|+||||++. +.+.++++++|++++++|++++++|| |+...+......+|+....+.++..++
T Consensus 7 kli~~DlDGTLl~~----~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~~~ 76 (266)
T 3pdw_A 7 KGYLIDLDGTMYNG----TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSM 76 (266)
T ss_dssp SEEEEECSSSTTCH----HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEHHH
T ss_pred CEEEEeCcCceEeC----CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCHHH
Confidence 45789999999985 45667899999999999999999988 777777888889998665555665444
No 51
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=99.11 E-value=7.7e-11 Score=117.33 Aligned_cols=68 Identities=12% Similarity=0.086 Sum_probs=55.9
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec---CChhHHHHHHHHcCccCCCccEEEEcCC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG---DKQDTAISIALSCKLLTPDMQQIIINGN 370 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG---r~~~~a~~ia~~~gl~~~~~~~i~~~g~ 370 (658)
+.+++|+||||++. +.+.++++++|++++++|++++++|| |+..........+|+....+.++..++.
T Consensus 9 kli~~DlDGTLl~~----~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~~~ 79 (268)
T 3qgm_A 9 KGYIIDIDGVIGKS----VTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYA 79 (268)
T ss_dssp SEEEEECBTTTEET----TEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHHHH
T ss_pred CEEEEcCcCcEECC----CEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHHHH
Confidence 46789999999984 34667899999999999999999999 6777777888888987666667766554
No 52
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=99.05 E-value=4.9e-10 Score=106.62 Aligned_cols=58 Identities=28% Similarity=0.418 Sum_probs=49.3
Q ss_pred CcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccccc
Q 041225 472 APLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQ 531 (658)
Q Consensus 472 ~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~ 531 (658)
.+.+|+.++..+.++ +++++++|||+.||++|++.||++++|. +.+.++..||+++.+
T Consensus 140 ~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~ 200 (211)
T 1l7m_A 140 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEK 200 (211)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECS
T ss_pred CCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecc
Confidence 357899998888876 5678999999999999999999999994 334578889999877
No 53
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=99.03 E-value=1.1e-10 Score=116.24 Aligned_cols=68 Identities=16% Similarity=0.138 Sum_probs=57.5
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
.+++|+||||++. +++.+++.++|++++++|++++++| ||+...+....+.+|+....++++..++..
T Consensus 19 ~v~~DlDGTLl~~----~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~ 89 (271)
T 1vjr_A 19 LFILDMDGTFYLD----DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEIT 89 (271)
T ss_dssp EEEECCBTTTEET----TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHH
T ss_pred EEEEcCcCcEEeC----CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHH
Confidence 4679999999985 4688999999999999999999999 999999988889999865556677655543
No 54
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=99.03 E-value=5.8e-11 Score=116.28 Aligned_cols=67 Identities=10% Similarity=0.042 Sum_probs=51.4
Q ss_pred EEEcCcccHHHHHHHHHhc---CCCeEEEEcCC-cCChhhhhhcceeEEe--cCccc-hhhh---hhcccccccccc
Q 041225 468 CCRVAPLQKAGIVDLIKSR---TDDMTLAIGDG-ANDVSMIQMADVGVGI--CGQEG-RQAV---MASDFAMGQFRF 534 (658)
Q Consensus 468 ~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg-~NDi~Ml~~A~vgIam--~~~~~-~~~k---~~AD~vl~~~~~ 534 (658)
+....+..|+.+++.++++ +++++++|||+ .||++|++.||+++++ .|+.. .+++ ..+|+++.+..-
T Consensus 170 ~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~e 246 (250)
T 2c4n_A 170 KPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAE 246 (250)
T ss_dssp CCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGG
T ss_pred CceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHH
Confidence 4456788899999999887 67899999999 7999999999999654 23332 3343 468888877654
No 55
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=99.01 E-value=3.8e-10 Score=116.23 Aligned_cols=150 Identities=21% Similarity=0.211 Sum_probs=98.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.++++.|+++|++++++||.....+..+++.+|+...-...+..
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~------------------------------ 227 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEI------------------------------ 227 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEE------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEe------------------------------
Confidence 68899999999999999999999999999999999999874211000000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.++ .. ...+.+....+..|.
T Consensus 228 -----------------------------------------~d~-~~------------------tg~~~~~~~~~kpk~ 247 (335)
T 3n28_A 228 -----------------------------------------VSG-KL------------------TGQVLGEVVSAQTKA 247 (335)
T ss_dssp -----------------------------------------ETT-EE------------------EEEEESCCCCHHHHH
T ss_pred -----------------------------------------eCC-ee------------------eeeecccccChhhhH
Confidence 000 00 000011122345788
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhh-hhhHHHHHHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVH-GHWNYQRIGYL 553 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~-gr~~~~~~~~~ 553 (658)
.+++.+.+. +++++++||||.||++|++.||+||+| ++.+.+++.||+++...++...+.++. ....-.|++..
T Consensus 248 ~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~ 325 (335)
T 3n28_A 248 DILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWK 325 (335)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccc
Confidence 888888776 568899999999999999999999999 444568999999986666554443332 22222244444
Q ss_pred HHHHHH
Q 041225 554 VLYNFY 559 (658)
Q Consensus 554 i~~~~~ 559 (658)
+.+.+.
T Consensus 326 ~~~~~~ 331 (335)
T 3n28_A 326 SKEGHH 331 (335)
T ss_dssp ------
T ss_pred cccccc
Confidence 444433
No 56
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=99.00 E-value=1e-09 Score=105.07 Aligned_cols=135 Identities=19% Similarity=0.252 Sum_probs=97.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.++.|+++|++++++|+.....+..+.+.+|+...-+.++..
T Consensus 75 ~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~------------------------------ 124 (217)
T 3m1y_A 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIV------------------------------ 124 (217)
T ss_dssp CBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEE------------------------------
T ss_pred cCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEE------------------------------
Confidence 68899999999999999999999999998888888888874321111000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.... . ..........+..|.
T Consensus 125 ------------------------------------------~~~~-------------~-----~~~~~~~~~~~k~k~ 144 (217)
T 3m1y_A 125 ------------------------------------------ENDA-------------L-----NGLVTGHMMFSHSKG 144 (217)
T ss_dssp ------------------------------------------ETTE-------------E-----EEEEEESCCSTTHHH
T ss_pred ------------------------------------------eCCE-------------E-----EeeeccCCCCCCChH
Confidence 0000 0 000111223567889
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhhhh
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGH 544 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~gr 544 (658)
.+++.+++. +++++++|||+.||++|++.||++++| ++.+.+++.||+++.+.++...+-+++|+
T Consensus 145 ~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 145 EMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp HHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred HHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 998888876 568899999999999999999999999 34456899999999988776665555444
No 57
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=99.00 E-value=2.2e-10 Score=113.83 Aligned_cols=67 Identities=13% Similarity=0.131 Sum_probs=53.0
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHHcCccCCCccEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALSCKLLTPDMQQI 365 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~~gl~~~~~~~i 365 (658)
..+++|+||||++...-.+.+.+.+.++++.++++|++++++| ||+...+......+|+..+...++
T Consensus 13 k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~~~~~ 82 (271)
T 2x4d_A 13 RGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDISEQEVT 82 (271)
T ss_dssp CEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCCCGGGEE
T ss_pred CEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCCCHHHee
Confidence 4578999999999621123477899999999999999999999 999999988888888754433333
No 58
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=98.96 E-value=2.7e-10 Score=113.05 Aligned_cols=68 Identities=18% Similarity=0.189 Sum_probs=57.3
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHHcCccCCCccEEEEcCC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALSCKLLTPDMQQIIINGN 370 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~ 370 (658)
+.+++|+||||++. +..+ ++++++|++++++|++++++| ||+...+......+|+....+.++..++.
T Consensus 6 kli~~DlDGTLl~~---~~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~ 76 (264)
T 3epr_A 6 KGYLIDLDGTIYKG---KSRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMA 76 (264)
T ss_dssp CEEEECCBTTTEET---TEEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHH
T ss_pred CEEEEeCCCceEeC---CEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHH
Confidence 35689999999997 5577 899999999999999999999 88888888899999987666666665543
No 59
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=98.89 E-value=1.8e-09 Score=101.79 Aligned_cols=62 Identities=27% Similarity=0.466 Sum_probs=51.0
Q ss_pred EEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHH
Q 041225 469 CRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 469 ~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
..+.+..|+.+++.+ +++++++|||+.||++|++.||++|+| +++.. .||+++.++.-+..+
T Consensus 134 ~~~~~~~k~~~l~~l---~~~~~i~iGD~~~Di~~~~~ag~~v~~-~~~~~----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF---RDGFILAMGDGYADAKMFERADMGIAV-GREIP----GADLLVKDLKELVDF 195 (201)
T ss_dssp EECCSSCHHHHHGGG---TTSCEEEEECTTCCHHHHHHCSEEEEE-SSCCT----TCSEEESSHHHHHHH
T ss_pred CcCCccCHHHHHHhc---CcCcEEEEeCCHHHHHHHHhCCceEEE-CCCCc----cccEEEccHHHHHHH
Confidence 456678899999988 468999999999999999999999999 44443 899999887654433
No 60
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=98.85 E-value=6.8e-09 Score=99.09 Aligned_cols=130 Identities=17% Similarity=0.235 Sum_probs=88.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|+++|++++++||.....+..+.+.+|+.... ++.
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~------------------------------- 128 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFA------------------------------- 128 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEE-------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEE-------------------------------
Confidence 47799999999999999999999999999888888888873210 000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
..+... .......+.....+|+
T Consensus 129 -------------------------------------~~~~~~---------------------~~~~~~~~~~~~~~~~ 150 (219)
T 3kd3_A 129 -------------------------------------VETIWN---------------------SDGSFKELDNSNGACD 150 (219)
T ss_dssp -------------------------------------EEEEEC---------------------TTSBEEEEECTTSTTT
T ss_pred -------------------------------------eeeeec---------------------CCCceeccCCCCCCcc
Confidence 000000 0012223444444555
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhh----cceeEEecCccchhhhhhcccccccccchHHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQM----ADVGVGICGQEGRQAVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~----A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~ 539 (658)
..++.+++. +++++++|||+.||++|++. +++++++ +++....+..||+++.++.-+..++
T Consensus 151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~-~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 151 SKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYME-HIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp CHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECS-SCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccC-ccccHHHHhhcceeeCCHHHHHHhh
Confidence 555555443 67899999999999999976 4555566 4555567889999998887665543
No 61
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=98.80 E-value=5.9e-09 Score=96.66 Aligned_cols=46 Identities=22% Similarity=0.110 Sum_probs=37.4
Q ss_pred HHhhhccceeeeccc------cccccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 300 AALIECDLTLLGATG------IEDKLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 300 ~~~~d~DgTllg~~~------~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
++++|.||||+.... -+-++.|++.++|++|+++|++++++|+++.
T Consensus 3 ~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 3 LIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp EEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTT
T ss_pred EEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHHCCCEEEEEECCCc
Confidence 357899999986421 0125789999999999999999999999975
No 62
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=98.76 E-value=2.5e-08 Score=95.67 Aligned_cols=62 Identities=8% Similarity=0.050 Sum_probs=47.9
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecC---ccchhhhhhcccccccccchHHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICG---QEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~---~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
..+++.+.++ +++++++|||+.||++|++.||+++++-. ++....+..||+++.++.-+..-
T Consensus 153 ~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 153 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 6667766665 56889999999999999999999998822 22334678899999888765443
No 63
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=98.75 E-value=1.2e-08 Score=104.67 Aligned_cols=64 Identities=20% Similarity=0.201 Sum_probs=52.0
Q ss_pred EEcCcccHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhc----ceeEEecCccchhhhhhcccccccccc
Q 041225 469 CRVAPLQKAGIVDLIKSR-TDDMTLAIGDGANDVSMIQMA----DVGVGICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 469 ~~~~~~~K~~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A----~vgIam~~~~~~~~k~~AD~vl~~~~~ 534 (658)
+.+.+.+|+.+++.+... ....|++||||.||++||+.| |+|||| |+.+.+|+.||+++.+.+.
T Consensus 201 i~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~lk~~Ad~v~~~~~~ 269 (332)
T 1y8a_A 201 KAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYALKHADVVIISPTA 269 (332)
T ss_dssp BCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHHTTCSEEEECSST
T ss_pred ecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHHHhhCcEEecCCCC
Confidence 567789999999965432 123399999999999999999 999999 4566799999999877544
No 64
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=98.74 E-value=8.9e-09 Score=97.64 Aligned_cols=120 Identities=16% Similarity=0.126 Sum_probs=89.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCC--ccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPD--MQQIIINGNSEEECKDLLADAKARYGVKSSNRTK 395 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~--~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~ 395 (658)
.+.+++.+.++.|+++|++++++|+.....+..+...+|+...- +.++
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~------------------------------ 119 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVL------------------------------ 119 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEE------------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEE------------------------------
Confidence 57889999999999999999999999998888888888763211 0000
Q ss_pred ccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCccc
Q 041225 396 CNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475 (658)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~ 475 (658)
+.. . ..+..
T Consensus 120 ------------------------------------------------------------------~~~----~-~~~kp 128 (205)
T 3m9l_A 120 ------------------------------------------------------------------GRD----E-APPKP 128 (205)
T ss_dssp ------------------------------------------------------------------CTT----T-SCCTT
T ss_pred ------------------------------------------------------------------eCC----C-CCCCC
Confidence 000 0 11223
Q ss_pred HHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce-eEEecCccchhhhhhcccccccccchHHHH
Q 041225 476 KAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV-GVGICGQEGRQAVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 476 K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v-gIam~~~~~~~~k~~AD~vl~~~~~l~~l~ 539 (658)
|..+++.+.+. +++++++|||+.||++|.+.||+ +|+| +++....+..||+++.++.-+..++
T Consensus 129 ~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v-~~~~~~~~~~ad~v~~~~~el~~~~ 195 (205)
T 3m9l_A 129 HPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLV-NLPDNPWPELTDWHARDCAQLRDLL 195 (205)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEC-SSSSCSCGGGCSEECSSHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEE-eCCCCcccccCCEEeCCHHHHHHHH
Confidence 44556666554 56889999999999999999999 9999 4555557888999999887766554
No 65
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.74 E-value=3.9e-08 Score=104.24 Aligned_cols=138 Identities=21% Similarity=0.275 Sum_probs=98.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEE-EcCCCHHHHHHHHHHHHHhcCcccCccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQII-INGNSEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~-~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
++.|++.+.++.|+++|++++++||.....+..+++.+|+...-...+. .++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg--------------------------- 308 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG--------------------------- 308 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT---------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC---------------------------
Confidence 6889999999999999999999999999999999999998321000000 000
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
...+ ....-...+..|
T Consensus 309 -----------------------------------------~~tg-----------------------~~~~~v~~~kpk 324 (415)
T 3p96_A 309 -----------------------------------------TLTG-----------------------RVVGPIIDRAGK 324 (415)
T ss_dssp -----------------------------------------EEEE-----------------------EECSSCCCHHHH
T ss_pred -----------------------------------------EEEe-----------------------eEccCCCCCcch
Confidence 0000 000011124567
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQ 548 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~ 548 (658)
..+++.+.+. +++++++||||.||++|++.||+|+++ ++.+.+++.||+++...++...+-++ .+|.-+.
T Consensus 325 ~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~ 398 (415)
T 3p96_A 325 ATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGEIE 398 (415)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHH
Confidence 8888888776 568899999999999999999999999 34445889999998877766655444 4544433
No 66
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=98.73 E-value=1.5e-08 Score=97.54 Aligned_cols=122 Identities=16% Similarity=0.124 Sum_probs=91.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|+++|++++++|+.....+..+...+|+...-+.++.
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 134 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVG------------------------------- 134 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE-------------------------------
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeec-------------------------------
Confidence 5789999999999999999999999988888888888776322110000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.+....+..|.
T Consensus 135 ---------------------------------------------------------------------~~~~~~~kp~~ 145 (226)
T 3mc1_A 135 ---------------------------------------------------------------------SSLDGKLSTKE 145 (226)
T ss_dssp ---------------------------------------------------------------------ECTTSSSCSHH
T ss_pred ---------------------------------------------------------------------cCCCCCCCCCH
Confidence 01112345688
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce---eEEecCccchhh-hhhcccccccccchHHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV---GVGICGQEGRQA-VMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v---gIam~~~~~~~~-k~~AD~vl~~~~~l~~l~ 539 (658)
.+++.+.++ +++++++|||+.||++|.+.||+ +|++........ +..||+++.++.-+..++
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 888888876 56799999999999999999999 666633233333 588999999888776664
No 67
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=98.67 E-value=1.3e-08 Score=98.63 Aligned_cols=121 Identities=20% Similarity=0.149 Sum_probs=88.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|+++|++++++|+.....+..+.+.+|+...-+.++.
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 152 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAG------------------------------- 152 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEEC-------------------------------
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEe-------------------------------
Confidence 6789999999999999999999999998888888888776322110000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
+ +....+..|.
T Consensus 153 -------------------------------------------~--------------------------~~~~~~kp~~ 163 (237)
T 4ex6_A 153 -------------------------------------------D--------------------------DSVERGKPHP 163 (237)
T ss_dssp -------------------------------------------T--------------------------TTSSSCTTSS
T ss_pred -------------------------------------------C--------------------------CCCCCCCCCH
Confidence 0 0011234456
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce---eEEecCccchhhhh-hcccccccccchHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV---GVGICGQEGRQAVM-ASDFAMGQFRFLKRL 538 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v---gIam~~~~~~~~k~-~AD~vl~~~~~l~~l 538 (658)
.+++.+.++ +++++++|||+.||++|.+.||+ +|++.++.....+. .||+++.++.-+..+
T Consensus 164 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ 231 (237)
T 4ex6_A 164 DMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA 231 (237)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 666666665 56899999999999999999999 77874444344554 799999887766544
No 68
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=98.64 E-value=1.4e-07 Score=95.59 Aligned_cols=66 Identities=18% Similarity=0.206 Sum_probs=52.3
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHHcCcc-CCCccEEEEc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALSCKLL-TPDMQQIIIN 368 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~~gl~-~~~~~~i~~~ 368 (658)
..+++|+||||+.. +.+.+++.+++++|+++|++++++| ||+........+.+|+. .....++..+
T Consensus 22 k~i~~D~DGTL~~~----~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~ 91 (306)
T 2oyc_A 22 QGVLFDCDGVLWNG----ERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSA 91 (306)
T ss_dssp SEEEECSBTTTEET----TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCGGGEEEHH
T ss_pred CEEEECCCCcEecC----CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCChhhEEcHH
Confidence 45789999999974 4677899999999999999999999 68888777777888875 3334444433
No 69
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=98.62 E-value=6e-08 Score=90.53 Aligned_cols=60 Identities=22% Similarity=0.238 Sum_probs=49.0
Q ss_pred HHHhhhccceeeecc---------------------ccccccCCChHHHHHHHHhcCCeEEEEecCC-hhHHHHHHHHcC
Q 041225 299 TAALIECDLTLLGAT---------------------GIEDKLQDGVPEAIEALRQAGIKVWVLTGDK-QDTAISIALSCK 356 (658)
Q Consensus 299 ~~~~~d~DgTllg~~---------------------~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~-~~~a~~ia~~~g 356 (658)
..+++|+||||.... .-.-++.|++.++|++|+++|++++++||++ ...+..+.+.+|
T Consensus 28 k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~g 107 (187)
T 2wm8_A 28 KLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFD 107 (187)
T ss_dssp SEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTT
T ss_pred CEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcC
Confidence 457899999998321 1123678999999999999999999999999 688888888888
Q ss_pred cc
Q 041225 357 LL 358 (658)
Q Consensus 357 l~ 358 (658)
+.
T Consensus 108 l~ 109 (187)
T 2wm8_A 108 LF 109 (187)
T ss_dssp CT
T ss_pred cH
Confidence 73
No 70
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=98.61 E-value=1.1e-07 Score=96.45 Aligned_cols=127 Identities=17% Similarity=0.213 Sum_probs=88.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.++.|+++|++++++||.....+..+++.+|+...-+..+...
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~----------------------------- 229 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIR----------------------------- 229 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEE-----------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEee-----------------------------
Confidence 588999999999999999999999999999999999998732111000000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
+... . .........+..|.
T Consensus 230 -------------------------------------------dg~~-----------------t-g~i~~~~~~~kpkp 248 (317)
T 4eze_A 230 -------------------------------------------DNVL-----------------T-DNITLPIMNAANKK 248 (317)
T ss_dssp -------------------------------------------TTEE-----------------E-EEECSSCCCHHHHH
T ss_pred -------------------------------------------CCee-----------------e-eeEecccCCCCCCH
Confidence 0000 0 00000011234567
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLK 536 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~ 536 (658)
.+++.+.+. +++++++|||+.||++|.+.||+|+++ + +...++..|+.++...++..
T Consensus 249 ~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~-~~~~~~~~a~~~i~~~~L~~ 308 (317)
T 4eze_A 249 QTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-K-AKPVVREKIHHQINYHGFEL 308 (317)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S-CCHHHHHHCCEEESSSCGGG
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-C-CCHHHHHhcCeeeCCCCHHH
Confidence 777777665 567899999999999999999999999 3 34457888998876444433
No 71
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=98.60 E-value=9e-08 Score=91.24 Aligned_cols=47 Identities=26% Similarity=0.346 Sum_probs=38.4
Q ss_pred HHHhhhccceeeeccccc-----cccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 299 TAALIECDLTLLGATGIE-----DKLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~-----d~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
..+++|.||||+....+. -++.|++.++|++|+++|++++++|+++.
T Consensus 26 k~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~ 77 (211)
T 2gmw_A 26 PAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSG 77 (211)
T ss_dssp CEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred CEEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHHHCCCeEEEEECcCC
Confidence 356899999998642111 26789999999999999999999999984
No 72
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=98.59 E-value=6.5e-08 Score=94.01 Aligned_cols=122 Identities=15% Similarity=0.102 Sum_probs=89.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|+++|++++++|+.....+..+...+|+...-+.++.
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 158 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAG------------------------------- 158 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE-------------------------------
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEe-------------------------------
Confidence 6789999999999999999999999988888888888877432111100
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.+....+..|.
T Consensus 159 ---------------------------------------------------------------------~~~~~~~kp~~ 169 (240)
T 3sd7_A 159 ---------------------------------------------------------------------SNLDGTRVNKN 169 (240)
T ss_dssp ---------------------------------------------------------------------ECTTSCCCCHH
T ss_pred ---------------------------------------------------------------------ccccCCCCCCH
Confidence 01112245677
Q ss_pred HHHHHHHhc---C-CCeEEEEcCCcCChhhhhhcce---eEEecCccchh-hhhhcccccccccchHHHH
Q 041225 478 GIVDLIKSR---T-DDMTLAIGDGANDVSMIQMADV---GVGICGQEGRQ-AVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 478 ~~v~~L~~~---~-~~~v~aiGDg~NDi~Ml~~A~v---gIam~~~~~~~-~k~~AD~vl~~~~~l~~l~ 539 (658)
.+++.+.+. + ++++++|||+.||++|.+.||+ +|++....... .+..||+++.++.-+..++
T Consensus 170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 888887776 5 7899999999999999999998 44442222222 2578999999988776654
No 73
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=98.57 E-value=4.1e-08 Score=93.83 Aligned_cols=59 Identities=5% Similarity=-0.098 Sum_probs=45.9
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
.+++.+.++ +++++++|||+.||++|++.||++++|. ++...++ .||+++.++.-+...
T Consensus 149 ~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~ 210 (221)
T 2wf7_A 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLE 210 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHH
T ss_pred HHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHH
Confidence 355555544 5689999999999999999999999994 4445567 899999887765443
No 74
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=98.54 E-value=4.6e-08 Score=94.34 Aligned_cols=122 Identities=18% Similarity=0.046 Sum_probs=87.6
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|++.|++++++|+.....+..+....|+...-+.++.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 139 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVT------------------------------- 139 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEEC-------------------------------
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeec-------------------------------
Confidence 5778999999999999999999999998888888888776432111000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
. +....+..|.
T Consensus 140 -------------------------------------------~--------------------------~~~~~~kp~~ 150 (233)
T 3s6j_A 140 -------------------------------------------R--------------------------DDVSYGKPDP 150 (233)
T ss_dssp -------------------------------------------G--------------------------GGSSCCTTST
T ss_pred -------------------------------------------c--------------------------ccCCCCCCCh
Confidence 0 0001233456
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce---eEEecCccchhhhhh-cccccccccchHHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV---GVGICGQEGRQAVMA-SDFAMGQFRFLKRLL 539 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v---gIam~~~~~~~~k~~-AD~vl~~~~~l~~l~ 539 (658)
.+++.+.+. +++++++|||+.||++|.+.||+ +|++..+.....+.. ||+++.++.-+..++
T Consensus 151 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 151 DLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 667776665 56889999999999999999999 444533444445554 999999887766553
No 75
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=98.53 E-value=1.1e-07 Score=91.81 Aligned_cols=60 Identities=18% Similarity=0.098 Sum_probs=42.0
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
..+++.+.++ +++++++|||+.||+.|.+.||++++|. +.....+ .||+++.++.-+...
T Consensus 149 ~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el~~~ 211 (233)
T 3nas_A 149 PDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDLTLE 211 (233)
T ss_dssp CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGCCHH
T ss_pred hHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhCCHH
Confidence 3345555444 5689999999999999999999999994 4444455 899999888766533
No 76
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.52 E-value=8.7e-08 Score=91.68 Aligned_cols=63 Identities=17% Similarity=0.099 Sum_probs=44.2
Q ss_pred HHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCc---cchhhhhh-cccccccccchHHH
Q 041225 476 KAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQ---EGRQAVMA-SDFAMGQFRFLKRL 538 (658)
Q Consensus 476 K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~---~~~~~k~~-AD~vl~~~~~l~~l 538 (658)
|..+++.+.++ +++++++|||+.||++|++.||++++|-++ ....++.. ||+++.++.-+..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 216 (225)
T 3d6j_A 147 DPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISV 216 (225)
T ss_dssp STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC--
T ss_pred ChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHh
Confidence 34555555554 567899999999999999999999877222 22334544 89999887766544
No 77
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=98.50 E-value=3.1e-07 Score=90.28 Aligned_cols=65 Identities=18% Similarity=0.205 Sum_probs=48.3
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHHcCccCCCccEEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALSCKLLTPDMQQIII 367 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~~gl~~~~~~~i~~ 367 (658)
..+++|+||||++. +..-+++.++++.++++|++++++| |++...+......+|+......++..
T Consensus 8 k~i~fDlDGTLld~----~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 75 (259)
T 2ho4_A 8 KAVLVDLNGTLHIE----DAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEISEDEIFTS 75 (259)
T ss_dssp CEEEEESSSSSCC-------CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCCGGGEEEH
T ss_pred CEEEEeCcCcEEeC----CEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCccHHHeecH
Confidence 35689999999985 3344789999999999999999999 66666666666777875554455443
No 78
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=98.50 E-value=1.3e-07 Score=89.78 Aligned_cols=120 Identities=18% Similarity=0.073 Sum_probs=84.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.|++.+.++.|+++|++++++|+.....+..+.+.+|+...-+.++..
T Consensus 84 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~------------------------------ 133 (216)
T 2pib_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFG------------------------------ 133 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECG------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHHhcCEEeec------------------------------
Confidence 57899999999999999999999999998888888888874321100000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
+....+..|.
T Consensus 134 ----------------------------------------------------------------------~~~~~~kp~~ 143 (216)
T 2pib_A 134 ----------------------------------------------------------------------DQVKNGKPDP 143 (216)
T ss_dssp ----------------------------------------------------------------------GGSSSCTTST
T ss_pred ----------------------------------------------------------------------ccCCCCCcCc
Confidence 0001122344
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce-----eEEecCccchhhhhhcccccccccchHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV-----GVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v-----gIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
.+++.+.++ +++++++|||+.||++|.+.||+ +|++.++... ....||+++.++.-+..+
T Consensus 144 ~~~~~~~~~~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~v~~~~~~~~-~~~~a~~~~~~~~el~~~ 211 (216)
T 2pib_A 144 EIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKA-LLEAGAVALVKPEEILNV 211 (216)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCEEEEECCSSSCCHH-HHHTTCSEEECGGGHHHH
T ss_pred HHHHHHHHHcCCCCceEEEEeCcHHHHHHHHHcCCcEEehccCCCCCchh-hcchhheeeCCHHHHHHH
Confidence 555555554 56889999999999999999999 4444333333 336899999988776554
No 79
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=98.47 E-value=1.2e-07 Score=89.24 Aligned_cols=56 Identities=16% Similarity=0.229 Sum_probs=41.2
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhccee-EEecCccchhhhhhcccccccccchHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVG-VGICGQEGRQAVMASDFAMGQFRFLKR 537 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vg-Iam~~~~~~~~k~~AD~vl~~~~~l~~ 537 (658)
..+++.+.++ +++++++|||+.||++|++.||++ |+| +++. . .||+++.++.-+..
T Consensus 143 ~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~-~~~~-~---~a~~v~~~~~el~~ 202 (207)
T 2go7_A 143 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF-LEST-Y---EGNHRIQALADISR 202 (207)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEES-SCCS-C---TTEEECSSTTHHHH
T ss_pred cHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEE-ecCC-C---CCCEEeCCHHHHHH
Confidence 3344444443 568899999999999999999998 677 4443 2 68999887765543
No 80
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=98.45 E-value=2.8e-07 Score=87.26 Aligned_cols=120 Identities=10% Similarity=-0.023 Sum_probs=84.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-+.++...
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~----------------------------- 139 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGE----------------------------- 139 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGG-----------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecc-----------------------------
Confidence 578899999999999999999999999988888888888743211111000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
....+..|.
T Consensus 140 -----------------------------------------------------------------------~~~~~kp~~ 148 (214)
T 3e58_A 140 -----------------------------------------------------------------------EFKESKPNP 148 (214)
T ss_dssp -----------------------------------------------------------------------GCSSCTTSS
T ss_pred -----------------------------------------------------------------------cccCCCCCh
Confidence 000112234
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCcc-chhhhhhcccccccccchHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQE-GRQAVMASDFAMGQFRFLKR 537 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~-~~~~k~~AD~vl~~~~~l~~ 537 (658)
.+++.+.++ +++++++|||+.||++|.+.||+++++.++. ....+..||+++.++.-+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 149 EIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGG
T ss_pred HHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHh
Confidence 455555544 5688999999999999999999988773432 22345789999988776543
No 81
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=98.45 E-value=1.1e-07 Score=94.00 Aligned_cols=40 Identities=33% Similarity=0.402 Sum_probs=33.6
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.+++.+.++.|++.|++++++|+.....+..+...+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4678999999999999999999999988777776666554
No 82
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=98.45 E-value=1.6e-06 Score=82.01 Aligned_cols=122 Identities=23% Similarity=0.190 Sum_probs=86.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.++.|+++ ++++++|+.....+..+.+.+|+...-...+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~-------------------------------- 115 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKL-------------------------------- 115 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEE--------------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceeccee--------------------------------
Confidence 5789999999999999 9999999999999999999888742100000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.... .........+.|..|.
T Consensus 116 ----------------------------------------~~~~--------------------~~~~~~~~~p~p~~~~ 135 (206)
T 1rku_A 116 ----------------------------------------EIDD--------------------SDRVVGYQLRQKDPKR 135 (206)
T ss_dssp ----------------------------------------EECT--------------------TSCEEEEECCSSSHHH
T ss_pred ----------------------------------------EEcC--------------------CceEEeeecCCCchHH
Confidence 0000 0000011237888999
Q ss_pred HHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhc-ccc-cccccch
Q 041225 478 GIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMAS-DFA-MGQFRFL 535 (658)
Q Consensus 478 ~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~A-D~v-l~~~~~l 535 (658)
.+++.+... +.++++|||+.||++|.+.||+++++ +... ..+..+ +++ +.++.-+
T Consensus 136 ~~l~~l~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~-~~~~-~~~~~~~~~~~~~~~~~l 192 (206)
T 1rku_A 136 QSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILF-HAPE-NVIREFPQFPAVHTYEDL 192 (206)
T ss_dssp HHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEE-SCCH-HHHHHCTTSCEECSHHHH
T ss_pred HHHHHHHhc-CCEEEEEeCChhhHHHHHhcCccEEE-CCcH-HHHHHHhhhccccchHHH
Confidence 999999775 67999999999999999999999998 3332 355544 443 4554433
No 83
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=98.41 E-value=3.5e-07 Score=87.94 Aligned_cols=121 Identities=15% Similarity=0.099 Sum_probs=86.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|+++|++++++|+.....+..+...+|+...-+.++...
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~----------------------------- 146 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVD----------------------------- 146 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGG-----------------------------
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehh-----------------------------
Confidence 678999999999999999999999999888888888777632211110000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
....+..|.
T Consensus 147 -----------------------------------------------------------------------~~~~~kp~~ 155 (230)
T 3um9_A 147 -----------------------------------------------------------------------EVRLFKPHQ 155 (230)
T ss_dssp -----------------------------------------------------------------------GTTCCTTCH
T ss_pred -----------------------------------------------------------------------hcccCCCCh
Confidence 001122345
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecC---ccchhhhhhcccccccccchHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICG---QEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~---~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
.+++.+.++ +++++++|||+.||+.|.+.||+++++-. +.....+..+|+++.++.-+..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 566666555 56889999999999999999999998822 23334567899999888765544
No 84
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=98.41 E-value=5e-07 Score=87.00 Aligned_cols=62 Identities=13% Similarity=0.139 Sum_probs=44.9
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcceeEEec--CccchhhhhhcccccccccchHHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGA-NDVSMIQMADVGVGIC--GQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~-NDi~Ml~~A~vgIam~--~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
..+++.++++ +++++++|||+. ||++|.+.||++++|- +++....+..+|+++.++.-+..+
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 3455555544 578999999999 9999999999999882 233333456688888887665443
No 85
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=98.39 E-value=1.4e-07 Score=94.26 Aligned_cols=125 Identities=12% Similarity=0.056 Sum_probs=87.2
Q ss_pred ccCCChHHHHHHHHhcCC--eEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccc
Q 041225 318 KLQDGVPEAIEALRQAGI--KVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTK 395 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI--~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~ 395 (658)
.+.+++.++++.|+++|+ +++++|+.....+..+.+.+|+...-+.++...
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~--------------------------- 194 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCD--------------------------- 194 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCC---------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEec---------------------------
Confidence 567889999999999999 999999999888888888888743211111000
Q ss_pred ccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCccc
Q 041225 396 CNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475 (658)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~ 475 (658)
........+..
T Consensus 195 ---------------------------------------------------------------------~~~~~~~~~Kp 205 (282)
T 3nuq_A 195 ---------------------------------------------------------------------YSRTDTLVCKP 205 (282)
T ss_dssp ---------------------------------------------------------------------CSSCSSCCCTT
T ss_pred ---------------------------------------------------------------------cCCCcccCCCc
Confidence 00000122345
Q ss_pred HHHHHHHHHhc---CC-CeEEEEcCCcCChhhhhhcceeEEecCccch-----hhhhhcccccccccchHHH
Q 041225 476 KAGIVDLIKSR---TD-DMTLAIGDGANDVSMIQMADVGVGICGQEGR-----QAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 476 K~~~v~~L~~~---~~-~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~-----~~k~~AD~vl~~~~~l~~l 538 (658)
|..+++.+.++ ++ +++++|||+.||+.|.+.||+|++|...... .....||+++.+..-+..+
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 67777777765 56 8999999999999999999998877322221 1134788999888766544
No 86
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=98.39 E-value=8.3e-07 Score=85.24 Aligned_cols=115 Identities=14% Similarity=-0.010 Sum_probs=83.3
Q ss_pred ccCCChHHHHHHHHhcC-CeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccc
Q 041225 318 KLQDGVPEAIEALRQAG-IKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~G-I~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
.+.+++.+.++.|+++| ++++++|+.....+..+...+|+...-+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 57789999999999999 9999999988877777777776632100
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
. +... +..|
T Consensus 151 --------------------------------------------------------------------~-~~~~--~kpk 159 (234)
T 3ddh_A 151 --------------------------------------------------------------------H-IEVM--SDKT 159 (234)
T ss_dssp --------------------------------------------------------------------E-EEEE--SCCS
T ss_pred --------------------------------------------------------------------e-eeec--CCCC
Confidence 1 1111 2347
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcceeEEec------Cccchhhhhh-cccccccccchHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGA-NDVSMIQMADVGVGIC------GQEGRQAVMA-SDFAMGQFRFLKR 537 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~-NDi~Ml~~A~vgIam~------~~~~~~~k~~-AD~vl~~~~~l~~ 537 (658)
..+++.++++ +++++++|||+. ||+.|.+.||+++++- +++....+.. +|+++.++.-+..
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~ 231 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLS 231 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHH
T ss_pred HHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHH
Confidence 7888888776 678999999996 9999999999998773 1222222333 4899888766544
No 87
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=98.38 E-value=1e-06 Score=84.96 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.+.|+.|+++|++++++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999999999973
No 88
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=98.36 E-value=1.9e-07 Score=89.47 Aligned_cols=45 Identities=29% Similarity=0.258 Sum_probs=37.2
Q ss_pred Hhhhccceeeecccc-----ccccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 301 ALIECDLTLLGATGI-----EDKLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 301 ~~~d~DgTllg~~~~-----~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
+++|+|||++....+ ..++.|++.++|++|+++|++++++|+++.
T Consensus 34 i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 34 LFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp EEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred EEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 568999999864110 136789999999999999999999999987
No 89
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=98.36 E-value=3e-07 Score=91.20 Aligned_cols=40 Identities=28% Similarity=0.232 Sum_probs=35.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.+++.+.++.|++.|++++++|+.....+..+...+|+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~ 150 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKE 150 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCc
Confidence 5778999999999999999999999998887777776665
No 90
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=98.35 E-value=8.1e-07 Score=85.59 Aligned_cols=63 Identities=16% Similarity=0.237 Sum_probs=46.9
Q ss_pred HHHHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcce---eEEecCccchhhhhhcccccccccchHHHH
Q 041225 476 KAGIVDLIKSR---TDDMTLAIGDGA-NDVSMIQMADV---GVGICGQEGRQAVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 476 K~~~v~~L~~~---~~~~v~aiGDg~-NDi~Ml~~A~v---gIam~~~~~~~~k~~AD~vl~~~~~l~~l~ 539 (658)
|..+++.+.++ +++++++|||+. ||+.|.+.||+ +|++ ++.....+..||+++.++.-+..++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~-~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 157 HPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDR-KGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECS-SSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred CHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECC-CCCccccccCCCEeeCCHHHHHHHH
Confidence 34555555554 568999999997 99999999995 5555 4555556779999999887665553
No 91
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=98.34 E-value=3.8e-07 Score=87.95 Aligned_cols=122 Identities=11% Similarity=0.004 Sum_probs=86.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.++++.|+++|++++++|+.....+..+...+|+...-+.++....
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~---------------------------- 150 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDA---------------------------- 150 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGG----------------------------
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecc----------------------------
Confidence 5779999999999999999999999998888888888877432111110000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
...+..|.
T Consensus 151 ------------------------------------------------------------------------~~~~kp~~ 158 (233)
T 3umb_A 151 ------------------------------------------------------------------------VRLYKTAP 158 (233)
T ss_dssp ------------------------------------------------------------------------TTCCTTSH
T ss_pred ------------------------------------------------------------------------cCCCCcCH
Confidence 00111233
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEec---CccchhhhhhcccccccccchHHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGIC---GQEGRQAVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~---~~~~~~~k~~AD~vl~~~~~l~~l~ 539 (658)
.+++.+.++ +++++++|||+.||+.|.+.||+++++- ++.....+..||+++.++.-+..++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 159 AAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp HHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 444444443 5689999999999999999999999882 3333445678999999887766554
No 92
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=98.30 E-value=1.9e-06 Score=82.70 Aligned_cols=128 Identities=19% Similarity=0.236 Sum_probs=86.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.++|+.|+++|++++++||.+...+..+.+.+|+... .++..
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--~~f~~------------------------------ 133 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFAN------------------------------ 133 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEE------------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcc--cEEee------------------------------
Confidence 6889999999999999999999999999999999999887420 00000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEc-----C
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRV-----A 472 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~-----~ 472 (658)
.+.... ...+..... .
T Consensus 134 --------------------------------------~~~~~~---------------------~~~~~~~~~~~~~~~ 154 (225)
T 1nnl_A 134 --------------------------------------RLKFYF---------------------NGEYAGFDETQPTAE 154 (225)
T ss_dssp --------------------------------------CEEECT---------------------TSCEEEECTTSGGGS
T ss_pred --------------------------------------eEEEcC---------------------CCcEecCCCCCcccC
Confidence 000000 000001110 1
Q ss_pred cccHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhcceeEEecCcc-chhhhhhcccccccccchH
Q 041225 473 PLQKAGIVDLIKSR-TDDMTLAIGDGANDVSMIQMADVGVGICGQE-GRQAVMASDFAMGQFRFLK 536 (658)
Q Consensus 473 ~~~K~~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~-~~~~k~~AD~vl~~~~~l~ 536 (658)
+..|..+++.+.+. +.+++++|||+.||++|.+.||++|++.... .......+|+++.++.-+.
T Consensus 155 ~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~ 220 (225)
T 1nnl_A 155 SGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELL 220 (225)
T ss_dssp TTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred CCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHH
Confidence 23577777777665 4478999999999999999999988884322 2234566899988876543
No 93
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=98.29 E-value=9.5e-07 Score=85.34 Aligned_cols=120 Identities=13% Similarity=0.068 Sum_probs=86.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.++++.++ +|++++++|+.....+......+|+...-+.++..
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~------------------------------ 155 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILS------------------------------ 155 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEe------------------------------
Confidence 57789999999999 99999999999888888887777764321111000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
+....+..|.
T Consensus 156 ----------------------------------------------------------------------~~~~~~kp~~ 165 (240)
T 3qnm_A 156 ----------------------------------------------------------------------EDLGVLKPRP 165 (240)
T ss_dssp ----------------------------------------------------------------------GGTTCCTTSH
T ss_pred ----------------------------------------------------------------------ccCCCCCCCH
Confidence 0001223456
Q ss_pred HHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcceeEEecCccc-hhhhhhcccccccccchHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGA-NDVSMIQMADVGVGICGQEG-RQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~-NDi~Ml~~A~vgIam~~~~~-~~~k~~AD~vl~~~~~l~~l 538 (658)
.+++.+.++ +++++++|||+. ||++|.+.||++++|.+... ...+..+|+++.++.-+..+
T Consensus 166 ~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 166 EIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH
Confidence 666666665 578999999995 99999999999998844333 14567899999988766544
No 94
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=98.26 E-value=3.5e-07 Score=86.66 Aligned_cols=62 Identities=16% Similarity=0.079 Sum_probs=44.8
Q ss_pred ccH--HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecC--c-cchhhhhhcccccccccchH
Q 041225 474 LQK--AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICG--Q-EGRQAVMASDFAMGQFRFLK 536 (658)
Q Consensus 474 ~~K--~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~--~-~~~~~k~~AD~vl~~~~~l~ 536 (658)
..| ..+++.+.+. +++++++|||+.||++|.+.||+++++.+ . .....+. ||+++.++.-+.
T Consensus 136 ~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~ 205 (209)
T 2hdo_A 136 KRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDIL 205 (209)
T ss_dssp CCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGG
T ss_pred CCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHH
Confidence 345 5555555544 56889999999999999999999998732 2 2333455 999988776553
No 95
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=98.26 E-value=2.4e-06 Score=79.64 Aligned_cols=61 Identities=16% Similarity=0.248 Sum_probs=48.1
Q ss_pred HHHhhhccceeeecc-------ccc----cccCCChHHHHHHHHhcCCeEEEEecCCh---hHHHHHHHHcCccC
Q 041225 299 TAALIECDLTLLGAT-------GIE----DKLQDGVPEAIEALRQAGIKVWVLTGDKQ---DTAISIALSCKLLT 359 (658)
Q Consensus 299 ~~~~~d~DgTllg~~-------~~~----d~l~~~~~~aI~~l~~~GI~v~i~TGr~~---~~a~~ia~~~gl~~ 359 (658)
..+++|+||||+... ..+ -++.|++.++++.|+++|++++++|+.+. ..+..+.+.+|+..
T Consensus 4 k~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~ 78 (189)
T 3ib6_A 4 THVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID 78 (189)
T ss_dssp CEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG
T ss_pred eEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh
Confidence 346789999996521 111 26789999999999999999999999876 77888888888743
No 96
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=98.25 E-value=9.1e-07 Score=86.20 Aligned_cols=41 Identities=24% Similarity=0.287 Sum_probs=37.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+.++.|+++|++++++|+.....+..+.+.+|+.
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 57789999999999999999999999998888888888873
No 97
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=98.24 E-value=2.2e-06 Score=82.51 Aligned_cols=41 Identities=20% Similarity=0.282 Sum_probs=37.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.+++.+.++.|+++|++++++|+.....+..+.+.+|+.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 143 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLT 143 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCch
Confidence 57899999999999999999999999988888888888764
No 98
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=98.24 E-value=4.3e-07 Score=88.78 Aligned_cols=62 Identities=16% Similarity=0.172 Sum_probs=46.7
Q ss_pred HHHHHHHHHhc---CC--CeEEEEcCCcCChhhhhhccee---EEecCccchhhhhhcccccccccchHHH
Q 041225 476 KAGIVDLIKSR---TD--DMTLAIGDGANDVSMIQMADVG---VGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 476 K~~~v~~L~~~---~~--~~v~aiGDg~NDi~Ml~~A~vg---Iam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
|..+++.+.++ ++ +++++|||+.||++|.+.||++ |++ ++.....+..||+++.++.-+...
T Consensus 173 ~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~-~~~~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 173 DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPD-GNLSRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCC-TTSCGGGSTTSSEECSCGGGCCGG
T ss_pred ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcC-CCCchhhcccccEeecCHHHhhHH
Confidence 44556666655 44 8999999999999999999954 444 444455788999999988766444
No 99
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=98.23 E-value=1.2e-06 Score=85.06 Aligned_cols=64 Identities=6% Similarity=-0.035 Sum_probs=44.3
Q ss_pred cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeE-EecC-ccc-hh-hhhhcccccccccchHHH
Q 041225 475 QKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGV-GICG-QEG-RQ-AVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 475 ~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgI-am~~-~~~-~~-~k~~AD~vl~~~~~l~~l 538 (658)
.|..+++.+.++ +++++++|||+.||++|.+.||+++ ++.. ... .. .+..||+++.++.-+..+
T Consensus 166 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~ 236 (247)
T 3dv9_A 166 PNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKN 236 (247)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHH
T ss_pred CCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 344556666555 5688999999999999999999764 4522 221 11 124799999988766544
No 100
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=98.23 E-value=2e-06 Score=82.49 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=37.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|+++|++++++|+.....+..+.+.+|+.
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH
Confidence 67899999999999999999999999988888888888863
No 101
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=98.23 E-value=1.3e-06 Score=84.84 Aligned_cols=63 Identities=10% Similarity=0.035 Sum_probs=44.0
Q ss_pred cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeE-EecCccchhh----hhhcccccccccchHHH
Q 041225 475 QKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGV-GICGQEGRQA----VMASDFAMGQFRFLKRL 538 (658)
Q Consensus 475 ~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgI-am~~~~~~~~----k~~AD~vl~~~~~l~~l 538 (658)
.|..+++.+.++ +++++++|||+.||+.|.+.||+++ ++ +++.... +..||+++.++.-+..+
T Consensus 167 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v-~~~~~~~~~l~~~~ad~v~~s~~el~~~ 237 (243)
T 3qxg_A 167 PNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAV-NTGPLDGQVLLDAGADLLFPSMQTLCDS 237 (243)
T ss_dssp TSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEE-CCSSSCHHHHHHTTCSEEESCHHHHHHH
T ss_pred CChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEE-eCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 344555555554 5689999999999999999999965 44 3322112 23699999888766544
No 102
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=98.22 E-value=1.1e-06 Score=91.01 Aligned_cols=40 Identities=15% Similarity=0.267 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.|+.++.|+.|+++|++++|+||.....+.++|.++|+
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 4789999999999999999999999999999999999986
No 103
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=98.20 E-value=1.8e-06 Score=83.16 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=36.2
Q ss_pred ccCCChHHHHHHHHhc-CCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQA-GIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~-GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.+++.+.++.|+++ |++++++|+.....+......+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 5679999999999999 9999999999988888888777764
No 104
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=98.20 E-value=2.8e-06 Score=80.64 Aligned_cols=115 Identities=13% Similarity=0.125 Sum_probs=83.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.++.|++ |+++.++|+.+...+..+.+.+|+...-+
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 127 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----------------------------------
Confidence 567899999999999 99999999998888888888887743211
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.++.....+..|.
T Consensus 128 -------------------------------------------------------------------~i~~~~~~~Kp~p 140 (210)
T 2ah5_A 128 -------------------------------------------------------------------GIYGSSPEAPHKA 140 (210)
T ss_dssp -------------------------------------------------------------------EEEEECSSCCSHH
T ss_pred -------------------------------------------------------------------eeecCCCCCCCCh
Confidence 1111113345677
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce---eEEecCcc-chhhh-hhcccccccccchH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV---GVGICGQE-GRQAV-MASDFAMGQFRFLK 536 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v---gIam~~~~-~~~~k-~~AD~vl~~~~~l~ 536 (658)
.+++.+.++ +++++++|||+.||+.|.+.||+ +|++ ++. ....+ ..+|+++.++.-+.
T Consensus 141 ~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~-~~~~~~~l~~~~a~~v~~~~~el~ 206 (210)
T 2ah5_A 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITW-GFGEQADLLNYQPDYIAHKPLEVL 206 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESS-SSSCHHHHHTTCCSEEESSTTHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcC-CCCCHHHHHhCCCCEEECCHHHHH
Confidence 777777665 56889999999999999999998 4555 333 22333 35899988776543
No 105
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=98.20 E-value=2.3e-06 Score=82.96 Aligned_cols=41 Identities=22% Similarity=0.256 Sum_probs=37.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.+.++.|+++|++++++|+.....+..+.+.+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57799999999999999999999999988888888888874
No 106
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=98.17 E-value=1.1e-06 Score=86.22 Aligned_cols=40 Identities=20% Similarity=0.236 Sum_probs=36.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.+++.+.++.|+++|++++++|+.....+..+.+.+|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 149 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGL 149 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcCh
Confidence 6788999999999999999999999998888888888776
No 107
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=98.17 E-value=1.3e-06 Score=84.14 Aligned_cols=41 Identities=17% Similarity=0.333 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.+.++.|+++|++++++|+.+...+..+.+.+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57799999999999999999999999988888888888764
No 108
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=98.16 E-value=9.7e-07 Score=86.26 Aligned_cols=67 Identities=7% Similarity=-0.017 Sum_probs=50.8
Q ss_pred cccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCc-------cchhh--hhhcccccccccchHHHH
Q 041225 473 PLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQ-------EGRQA--VMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 473 ~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~-------~~~~~--k~~AD~vl~~~~~l~~l~ 539 (658)
+..|..+++.+.++ +++++++|||+.||++|.+.||++++|.+. ....+ +..||+++.++.-+..++
T Consensus 172 ~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 172 YKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 44567777777766 578999999999999999999999988441 11123 678999999887665553
No 109
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=98.16 E-value=1.4e-06 Score=83.60 Aligned_cols=65 Identities=14% Similarity=0.198 Sum_probs=48.6
Q ss_pred ccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhccee-EEecCccc------hhhhhh-cccccccccchHHH
Q 041225 474 LQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVG-VGICGQEG------RQAVMA-SDFAMGQFRFLKRL 538 (658)
Q Consensus 474 ~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vg-Iam~~~~~------~~~k~~-AD~vl~~~~~l~~l 538 (658)
..|+.+++.+.++ +++++++|||+.||++|++.||++ |++.+... ..+++. ||+++.+..-+..+
T Consensus 143 kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 143 KPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred CcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 4567777777765 568999999999999999999998 56633222 136666 99999887765443
No 110
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=98.16 E-value=9.9e-06 Score=77.99 Aligned_cols=121 Identities=17% Similarity=0.185 Sum_probs=84.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.++++.|+++ ++++++|+.....+......+|+...-+.++...
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~----------------------------- 152 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSE----------------------------- 152 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGG-----------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEec-----------------------------
Confidence 5778999999999999 9999999999888888888877643211110000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
....+..|.
T Consensus 153 -----------------------------------------------------------------------~~~~~kp~~ 161 (238)
T 3ed5_A 153 -----------------------------------------------------------------------DTGFQKPMK 161 (238)
T ss_dssp -----------------------------------------------------------------------GTTSCTTCH
T ss_pred -----------------------------------------------------------------------ccCCCCCCh
Confidence 001122345
Q ss_pred HHHHHHHhc----CCCeEEEEcCCc-CChhhhhhcceeE-Ee-cCccchhhhhhcccccccccchHHHH
Q 041225 478 GIVDLIKSR----TDDMTLAIGDGA-NDVSMIQMADVGV-GI-CGQEGRQAVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 478 ~~v~~L~~~----~~~~v~aiGDg~-NDi~Ml~~A~vgI-am-~~~~~~~~k~~AD~vl~~~~~l~~l~ 539 (658)
.+++.+.++ +++++++|||+. ||++|.+.||++. .+ .++.....+..||+++.++.-+..++
T Consensus 162 ~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp HHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred HHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 556655554 357899999998 9999999999965 44 22224446778999999988776664
No 111
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=98.15 E-value=9e-06 Score=78.78 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=36.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.+++.+.++.|+++|++++++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 46789999999999999999999999888888888887763
No 112
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=98.13 E-value=1.1e-06 Score=85.95 Aligned_cols=60 Identities=15% Similarity=0.221 Sum_probs=46.2
Q ss_pred HHHhhhccceeeecccc----------------------ccccCCChHHHHHHHHhcCCeEEEEecCChhH---HHHHHH
Q 041225 299 TAALIECDLTLLGATGI----------------------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDT---AISIAL 353 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~----------------------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~---a~~ia~ 353 (658)
..+++|+||||+..... ..++.|++.++|+.|+++|++++++|||+... +.....
T Consensus 60 kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~ 139 (258)
T 2i33_A 60 PAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLE 139 (258)
T ss_dssp EEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHH
T ss_pred CEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHH
Confidence 35789999999986300 14788999999999999999999999999543 444455
Q ss_pred HcCcc
Q 041225 354 SCKLL 358 (658)
Q Consensus 354 ~~gl~ 358 (658)
.+|+.
T Consensus 140 ~~Gl~ 144 (258)
T 2i33_A 140 RVGAP 144 (258)
T ss_dssp HHTCS
T ss_pred HcCCC
Confidence 66663
No 113
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=98.12 E-value=2.7e-06 Score=82.60 Aligned_cols=40 Identities=18% Similarity=0.244 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4668999999999999999999999888777777777775
No 114
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=98.11 E-value=1.3e-05 Score=71.23 Aligned_cols=109 Identities=17% Similarity=0.256 Sum_probs=74.5
Q ss_pred eecCChhHHHHHHHHHHc-CcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhH
Q 041225 153 YQGESPDEQALVSAASAY-GYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMF 231 (658)
Q Consensus 153 ~~~~~p~e~al~~~a~~~-g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~ 231 (658)
..+.||+.+|++++|+.. |+.+..... . .....+|++..++..|.+ +| ..+.+|++..|.
T Consensus 47 ~~SeHPla~AIv~~A~~~~~l~~~~~~~---------~-----~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~i~ 107 (156)
T 1svj_A 47 LADETPEGRSIVILAKQRFNLRERDVQS---------L-----HATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIR 107 (156)
T ss_dssp SSCCSHHHHHHHHHHHHHTTCCCCCHHH---------H-----TCEEEEEETTTTEEEEEE---TT--EEEEEEEHHHHH
T ss_pred CcCCCHHHHHHHHHHHHhcCCCcccccc---------c-----ccceeeccccCCCCeEEE---CC--EEEEEeCcHHHH
Confidence 345799999999999986 654311000 0 001346777777667644 34 457899998877
Q ss_pred HhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeee
Q 041225 232 NILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLG 311 (658)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg 311 (658)
.++...... ....+...++.++.+|.+++.+| .|+.++|
T Consensus 108 ~l~~~~gi~---~~~~~~~~~~~la~~G~T~v~VA--------------------------------------~d~~l~G 146 (156)
T 1svj_A 108 RHVEANGGH---FPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLG 146 (156)
T ss_dssp HHHHHHTCC---CCHHHHHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEE
T ss_pred HHHHHcCCC---CcHHHHHHHHHHHhCCCCEEEEE--------------------------------------ECCEEEE
Confidence 776532111 11235677888999999999998 3689999
Q ss_pred ccccccccCC
Q 041225 312 ATGIEDKLQD 321 (658)
Q Consensus 312 ~~~~~d~l~~ 321 (658)
.+++.|+++|
T Consensus 147 vIalaD~iK~ 156 (156)
T 1svj_A 147 VIALKDIVKG 156 (156)
T ss_dssp EEEEEECCCC
T ss_pred EEEEecCCCC
Confidence 9999999986
No 115
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=98.05 E-value=2.8e-06 Score=82.75 Aligned_cols=66 Identities=6% Similarity=-0.055 Sum_probs=49.5
Q ss_pred cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccc-------hh--hhhhcccccccccchHHHHh
Q 041225 475 QKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEG-------RQ--AVMASDFAMGQFRFLKRLLL 540 (658)
Q Consensus 475 ~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~-------~~--~k~~AD~vl~~~~~l~~l~l 540 (658)
.|..+++.+.++ +++++++|||+.||+.|.+.||++++|.+... .. .+..+|+++.++.-+..++.
T Consensus 170 p~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~ 247 (254)
T 3umg_A 170 PDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLR 247 (254)
T ss_dssp TSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhc
Confidence 345666666665 56899999999999999999999998844211 11 25778999999887766643
No 116
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=98.05 E-value=5.1e-06 Score=81.27 Aligned_cols=39 Identities=13% Similarity=0.159 Sum_probs=34.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+.++.|+ |++++++|+.+...+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 57799999999999 9999999999998888888888764
No 117
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=98.04 E-value=7.6e-06 Score=76.68 Aligned_cols=52 Identities=21% Similarity=0.277 Sum_probs=41.4
Q ss_pred HHHhhhccceeeecccc-----------ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHH
Q 041225 299 TAALIECDLTLLGATGI-----------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISI 351 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~-----------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~i 351 (658)
..+++|+||||+.. +. .-++-|++.++|+.|+++|+++.++||.....+..+
T Consensus 7 kav~fDlDGTL~d~-~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 7 PALLFGLSGCLVDF-GAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp SCEEEETBTTTBCT-TSTTTSCSSCCGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred CEEEEcCCCceEec-cccccchhhcccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence 35689999999873 21 125679999999999999999999999987766443
No 118
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=98.02 E-value=1e-06 Score=77.12 Aligned_cols=54 Identities=15% Similarity=0.149 Sum_probs=44.9
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
+++|+||||.+ ..++.|++.+++++|+++|++++++|+++...+..+.+.+|+.
T Consensus 5 i~~D~DgtL~~----~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 5 LIVDYAGVLDG----TDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp EEECSTTTTSS----CHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred EEEeccceecC----CCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 46899999943 3457789999999999999999999999988877777776653
No 119
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=98.02 E-value=1.2e-06 Score=76.48 Aligned_cols=60 Identities=15% Similarity=0.049 Sum_probs=46.1
Q ss_pred HHHhhhccceeeeccc-cccccCCChHHHHHHHHhcCCeEEEEecCC---hhHHHHHHHHcCcc
Q 041225 299 TAALIECDLTLLGATG-IEDKLQDGVPEAIEALRQAGIKVWVLTGDK---QDTAISIALSCKLL 358 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~-~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~---~~~a~~ia~~~gl~ 358 (658)
.++++|+||||+..-. --.+..+.+.++|++|+++|++++++|||+ ...+...+.+.|+.
T Consensus 4 k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 4 MTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp CEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred eEEEEECcCCCCCCCCccccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 4568999999998421 001345799999999999999999999998 45566667777763
No 120
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=98.01 E-value=8.3e-06 Score=83.53 Aligned_cols=54 Identities=20% Similarity=0.222 Sum_probs=42.3
Q ss_pred Hhhhccceeeecccccc--------------ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH
Q 041225 301 ALIECDLTLLGATGIED--------------KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS 354 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d--------------~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~ 354 (658)
+.+|.||||.+-...++ ++-+++.+.|+.|+++|+++.++|+++...+..+++.
T Consensus 225 lv~DvDnTL~~G~l~~dG~~~~~~~dg~g~g~~ypgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~ 292 (387)
T 3nvb_A 225 LILDLDNTIWGGVVGDDGWENIQVGHGLGIGKAFTEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFER 292 (387)
T ss_dssp EEECCBTTTBBSCHHHHCGGGSBCSSSSSTHHHHHHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHH
T ss_pred EEEcCCCCCCCCeecCCCceeEEeccCccccccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 45689999987321111 2235688999999999999999999999999998877
No 121
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=98.00 E-value=7.5e-06 Score=81.28 Aligned_cols=40 Identities=23% Similarity=0.019 Sum_probs=34.7
Q ss_pred ccCCChHHHHHHHHhc-CCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQA-GIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~-GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.+++.+.++.|++. |++++++|+.....+.......|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4678999999999999 999999999988887777777665
No 122
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=98.00 E-value=5e-06 Score=77.13 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=36.0
Q ss_pred cHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcc
Q 041225 475 QKAGIVDLIKSR-TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD 526 (658)
Q Consensus 475 ~K~~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD 526 (658)
.|..+++.+.++ +..++++|||+.||++|.+.||+++++-+. +...++..+
T Consensus 138 p~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~-~~~~~~~l~ 189 (190)
T 2fi1_A 138 PNPESMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHLFTS-IVNLRQVLD 189 (190)
T ss_dssp TSCHHHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEECSC-HHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCeEEEECC-CCChhhccC
Confidence 345566666655 222899999999999999999999887343 333555443
No 123
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=98.00 E-value=7.6e-06 Score=80.64 Aligned_cols=64 Identities=14% Similarity=0.195 Sum_probs=49.5
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH----cCccCCCccEEEE
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS----CKLLTPDMQQIII 367 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~----~gl~~~~~~~i~~ 367 (658)
.+++|+||||+.. +..+ +++.++++.++++|++++++|||...+...++.. +|+......++..
T Consensus 7 ~v~fDlDGTL~~~---~~~~-~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 74 (264)
T 1yv9_A 7 GYLIDLDGTIYLG---KEPI-PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTA 74 (264)
T ss_dssp EEEECCBTTTEET---TEEC-HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEH
T ss_pred EEEEeCCCeEEeC---CEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcH
Confidence 4679999999985 3345 6889999999999999999999998777666654 7775444445543
No 124
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=97.97 E-value=9.2e-06 Score=76.26 Aligned_cols=39 Identities=13% Similarity=0.160 Sum_probs=34.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.+ ++.|+++ ++++++|+.+...+..+...+|+.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 112 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL 112 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH
Confidence 56788889 9999999 999999999988888888888864
No 125
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=97.96 E-value=2.2e-05 Score=75.84 Aligned_cols=65 Identities=12% Similarity=0.183 Sum_probs=47.4
Q ss_pred CcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhh--cccccccccchHHH
Q 041225 472 APLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMA--SDFAMGQFRFLKRL 538 (658)
Q Consensus 472 ~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~--AD~vl~~~~~l~~l 538 (658)
.+..|..+++.+.- +++++++|||+.+|++|.+.||+.++..+ ....+... +|+++.++.-+..+
T Consensus 148 ~~~~K~~~~~~~~~-~~~~~~~vGDs~~Di~~a~~aG~~~~~~~-~~~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 148 CGCCKPSVIHELSE-PNQYIIMIGDSVTDVEAAKLSDLCFARDY-LLNECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp CSSCHHHHHHHHCC-TTCEEEEEECCGGGHHHHHTCSEEEECHH-HHHHHHHTTCCEECCSSHHHHHHH
T ss_pred cCCcHHHHHHHHhc-cCCeEEEEeCChHHHHHHHhCCeeeechH-HHHHHHHCCCCeeecCCHHHHHHH
Confidence 36689888888764 36899999999999999999999987522 22223333 78888777655443
No 126
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=97.88 E-value=9.2e-05 Score=72.00 Aligned_cols=39 Identities=23% Similarity=0.180 Sum_probs=33.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.+++.+.++.|+ +|++++++|+.....+......+|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l 150 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGL 150 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCc
Confidence 56799999999999 9999999999988777777766665
No 127
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=97.87 E-value=1.5e-05 Score=78.38 Aligned_cols=52 Identities=10% Similarity=0.022 Sum_probs=40.4
Q ss_pred CCCeEEEEcCCc-CChhhhhhcceeEEecCccchhhh------hhcccccccccchHHHH
Q 041225 487 TDDMTLAIGDGA-NDVSMIQMADVGVGICGQEGRQAV------MASDFAMGQFRFLKRLL 539 (658)
Q Consensus 487 ~~~~v~aiGDg~-NDi~Ml~~A~vgIam~~~~~~~~k------~~AD~vl~~~~~l~~l~ 539 (658)
+++++++|||+. ||+.|.+.||+++++.+... ..+ ..||+++.++.-+..++
T Consensus 177 ~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~-~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 177 EPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQ-ALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp CGGGEEEEESCHHHHTHHHHTTTCEEEEECCSS-CCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred CHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCC-CCchhhcccCCCceEeCCHHHHHHHH
Confidence 568999999997 99999999999998833332 122 26899999988776654
No 128
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=97.83 E-value=7.4e-06 Score=78.87 Aligned_cols=52 Identities=10% Similarity=-0.002 Sum_probs=40.5
Q ss_pred CCCeEEEEcCCc-CChhhhhhcceeEEecCcc----------chhhhhhcccccccccchHHH
Q 041225 487 TDDMTLAIGDGA-NDVSMIQMADVGVGICGQE----------GRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 487 ~~~~v~aiGDg~-NDi~Ml~~A~vgIam~~~~----------~~~~k~~AD~vl~~~~~l~~l 538 (658)
+++++++|||+. ||+.|.+.||++++|-+.. ....+..||+++.++.-+..+
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~ 233 (240)
T 3smv_A 171 EKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEA 233 (240)
T ss_dssp CGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHH
T ss_pred CchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHH
Confidence 578999999996 9999999999999883322 122457899999887765544
No 129
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=97.78 E-value=0.00014 Score=71.39 Aligned_cols=65 Identities=22% Similarity=0.190 Sum_probs=49.7
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH---cCccCCCccEEEEcC
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS---CKLLTPDMQQIIING 369 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~---~gl~~~~~~~i~~~g 369 (658)
+++|+||||+.. ...+ +++.++|++++++|++++++|||+..+...+++. +|+....+.++..++
T Consensus 4 i~~D~DGtL~~~---~~~~-~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~ 71 (263)
T 1zjj_A 4 IIFDMDGVLYRG---NRAI-PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGL 71 (263)
T ss_dssp EEEECBTTTEET---TEEC-TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHH
T ss_pred EEEeCcCceEeC---CEeC-ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHH
Confidence 468999999974 3344 8999999999999999999999998777766655 576444445555443
No 130
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=97.77 E-value=2.4e-05 Score=75.56 Aligned_cols=59 Identities=12% Similarity=0.205 Sum_probs=46.2
Q ss_pred HHhhhccceeeecccc-----------------------ccccCCChHHHHHHHHhcCCeEEEEecCChh----HHHHHH
Q 041225 300 AALIECDLTLLGATGI-----------------------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQD----TAISIA 352 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~-----------------------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~----~a~~ia 352 (658)
++.+|+|||++..... ..++-|++.+.++.|+++|++++++|||+.. .+..-.
T Consensus 60 avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L 139 (260)
T 3pct_A 60 AVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDM 139 (260)
T ss_dssp EEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHH
T ss_pred EEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHH
Confidence 5789999999976411 1356689999999999999999999999764 555666
Q ss_pred HHcCcc
Q 041225 353 LSCKLL 358 (658)
Q Consensus 353 ~~~gl~ 358 (658)
+.+|+.
T Consensus 140 ~~lGi~ 145 (260)
T 3pct_A 140 KRLGFT 145 (260)
T ss_dssp HHHTCC
T ss_pred HHcCcC
Confidence 677774
No 131
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=97.68 E-value=2.6e-05 Score=75.47 Aligned_cols=59 Identities=17% Similarity=0.153 Sum_probs=45.5
Q ss_pred HHhhhccceeeeccc-----------c------------ccccCCChHHHHHHHHhcCCeEEEEecCChh----HHHHHH
Q 041225 300 AALIECDLTLLGATG-----------I------------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQD----TAISIA 352 (658)
Q Consensus 300 ~~~~d~DgTllg~~~-----------~------------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~----~a~~ia 352 (658)
++.+|+|||++.... + ..++-|++.+.++.|+++|++++++|||+.. .+..-.
T Consensus 60 avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L 139 (262)
T 3ocu_A 60 AVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDM 139 (262)
T ss_dssp EEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHH
T ss_pred EEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHH
Confidence 567899999997641 1 2346689999999999999999999999764 455556
Q ss_pred HHcCcc
Q 041225 353 LSCKLL 358 (658)
Q Consensus 353 ~~~gl~ 358 (658)
+.+|+.
T Consensus 140 ~~lGi~ 145 (262)
T 3ocu_A 140 KRLGFN 145 (262)
T ss_dssp HHHTCS
T ss_pred HHcCcC
Confidence 667764
No 132
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=97.61 E-value=2.5e-05 Score=71.73 Aligned_cols=58 Identities=22% Similarity=0.283 Sum_probs=44.0
Q ss_pred HHhhhccceeeeccc--c------ccccCCChHHHHHHHHhcCCeEEEEecC---------------ChhHHHHHHHHcC
Q 041225 300 AALIECDLTLLGATG--I------EDKLQDGVPEAIEALRQAGIKVWVLTGD---------------KQDTAISIALSCK 356 (658)
Q Consensus 300 ~~~~d~DgTllg~~~--~------~d~l~~~~~~aI~~l~~~GI~v~i~TGr---------------~~~~a~~ia~~~g 356 (658)
.+++|.||||+.... + .-++.|++.++|+.|+++|++++++|+. ....+..+.+.+|
T Consensus 16 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 95 (176)
T 2fpr_A 16 YLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQG 95 (176)
T ss_dssp EEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcC
Confidence 346899999986521 1 2357799999999999999999999998 3455566666666
Q ss_pred c
Q 041225 357 L 357 (658)
Q Consensus 357 l 357 (658)
+
T Consensus 96 l 96 (176)
T 2fpr_A 96 V 96 (176)
T ss_dssp C
T ss_pred C
Confidence 5
No 133
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=97.61 E-value=1.8e-05 Score=74.70 Aligned_cols=36 Identities=11% Similarity=0.160 Sum_probs=30.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS 354 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~ 354 (658)
.+.|++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 466889999999999 999999999887776666554
No 134
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=97.59 E-value=7.6e-05 Score=71.30 Aligned_cols=65 Identities=15% Similarity=0.125 Sum_probs=46.9
Q ss_pred cHHHHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcceeEEecCc--cchhhhhhcccccccccchHHHH
Q 041225 475 QKAGIVDLIKSR---TDDMTLAIGDGA-NDVSMIQMADVGVGICGQ--EGRQAVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 475 ~K~~~v~~L~~~---~~~~v~aiGDg~-NDi~Ml~~A~vgIam~~~--~~~~~k~~AD~vl~~~~~l~~l~ 539 (658)
.|..+++.+.++ +++++++|||+. ||+.|.+.||+++++-.. ........+|+++.++.-+..++
T Consensus 156 p~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 156 PDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred cCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 345666666655 578999999997 999999999999866222 21112567899999887766553
No 135
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=97.41 E-value=7.8e-05 Score=69.61 Aligned_cols=40 Identities=15% Similarity=0.062 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.+.++.|+++| +++++|+.+...+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 46788999999999999 99999999988888888777763
No 136
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=97.40 E-value=3.4e-05 Score=66.39 Aligned_cols=47 Identities=21% Similarity=0.187 Sum_probs=38.2
Q ss_pred Hhhhccceeeecccc---ccccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 301 ALIECDLTLLGATGI---EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 301 ~~~d~DgTllg~~~~---~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
+++|+||||++...- +..+.+.+.+++++++++|++++++|||+...
T Consensus 4 i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 4 LIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp EEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred EEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 578999999975220 01466889999999999999999999998765
No 137
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=97.26 E-value=0.00067 Score=66.39 Aligned_cols=40 Identities=23% Similarity=0.358 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|++ |++++++|+.+...+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 577899999999998 5999999999988888888888874
No 138
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=97.20 E-value=0.00015 Score=69.44 Aligned_cols=35 Identities=11% Similarity=0.089 Sum_probs=29.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIAL 353 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~ 353 (658)
++.|++.++++.|+++ ++++++|+.....+..+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~ 146 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCK 146 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHh
Confidence 4668899999999999 9999999998887776653
No 139
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=97.18 E-value=3.3e-05 Score=72.51 Aligned_cols=30 Identities=27% Similarity=0.351 Sum_probs=26.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
.+.|++.+.++.|+++|++++++|+.+...
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 567899999999999999999999976544
No 140
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=97.06 E-value=0.0016 Score=61.40 Aligned_cols=42 Identities=29% Similarity=0.265 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++.|++.++++.|+++|+++.++|+.+...+....+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 567899999999999999999999999999999998888754
No 141
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=96.95 E-value=6.5e-05 Score=71.17 Aligned_cols=28 Identities=14% Similarity=0.280 Sum_probs=24.3
Q ss_pred CCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 320 QDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 320 ~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
.+++.+.++.|+++|++++++||++...
T Consensus 90 ~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 90 KEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred cHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 4578899999999999999999997643
No 142
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=96.89 E-value=0.0019 Score=59.25 Aligned_cols=44 Identities=16% Similarity=0.068 Sum_probs=29.3
Q ss_pred eeeecCChhHHHHHHHHHHc-CcE-EEEEcCCeEEEEeCCcEEEEEEEE
Q 041225 151 IDYQGESPDEQALVSAASAY-GYT-LFERTSGHIVIDINGEGLRLDVLG 197 (658)
Q Consensus 151 ~~~~~~~p~e~al~~~a~~~-g~~-~~~~~~~~~~~~~~g~~~~~~il~ 197 (658)
++..+.||+..|++++++.. +.. +.. -.-+..+.|.+.+..+-.
T Consensus 34 ~E~~SeHPlA~AIv~~a~~~~~~~~~~~---~~~f~~i~G~Gv~~~V~g 79 (185)
T 2kmv_A 34 AESNSEHPLGTAITKYCKQELDTETLGT---CIDFQVVPGCGISCKVTN 79 (185)
T ss_dssp GGGSSSCHHHHHHHHHHHHHHTCSCCCC---CBCCEEETTTEEEEEECC
T ss_pred HHccCCCHHHHHHHHHHHhhcCCCCCCC---ccceEEeccceEEEEECC
Confidence 45567899999999999764 432 111 112457888988887643
No 143
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=96.60 E-value=0.0012 Score=63.12 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=35.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.|++.++++.|+++| +++++|+.+...+..+.+.+|+
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 68899999999999999 9999999998888888888776
No 144
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=96.57 E-value=0.002 Score=62.43 Aligned_cols=47 Identities=17% Similarity=0.295 Sum_probs=36.6
Q ss_pred CCCeEEEEcCCcCChhhhhhcce-eEEecCccchhhhhhcccccccccchH
Q 041225 487 TDDMTLAIGDGANDVSMIQMADV-GVGICGQEGRQAVMASDFAMGQFRFLK 536 (658)
Q Consensus 487 ~~~~v~aiGDg~NDi~Ml~~A~v-gIam~~~~~~~~k~~AD~vl~~~~~l~ 536 (658)
.++++++|||+.+|+.+=+.||+ .|++. +.. -...||+++.++.-+.
T Consensus 186 ~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~--~~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 186 NPQNCIGIEDASAGIDAINSANMFSVGVG-NYE--NLKKANLVVDSTNQLK 233 (250)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEES-CTT--TTTTSSEEESSGGGCC
T ss_pred ChHHeEEECCCHHHHHHHHHcCCEEEEEC-Chh--HhccCCEEECChHhCC
Confidence 46899999999999999999997 46773 332 2346899998887653
No 145
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=96.57 E-value=0.00095 Score=66.87 Aligned_cols=47 Identities=23% Similarity=0.299 Sum_probs=36.0
Q ss_pred Hhhhccceeeecccc---------ccccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 301 ALIECDLTLLGATGI---------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 301 ~~~d~DgTllg~~~~---------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
+.+|.|||+.....- +.++.|++.++++.|+++|++++++||++...
T Consensus 162 i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 162 VIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp EEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred EEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 347888887654331 12357899999999999999999999998643
No 146
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=96.55 E-value=0.0015 Score=65.89 Aligned_cols=39 Identities=21% Similarity=0.378 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK 356 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~g 356 (658)
.+.++.++.++.++++|+.++|+||-...-+.++|...+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~ 181 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPR 181 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcc
Confidence 577899999999999999999999999999999998753
No 147
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=96.34 E-value=0.0041 Score=65.24 Aligned_cols=45 Identities=24% Similarity=0.363 Sum_probs=36.2
Q ss_pred HHhhhccceeeeccc-------ccc--ccCCChHHHHHHHHhcCCeEEEEecCC
Q 041225 300 AALIECDLTLLGATG-------IED--KLQDGVPEAIEALRQAGIKVWVLTGDK 344 (658)
Q Consensus 300 ~~~~d~DgTllg~~~-------~~d--~l~~~~~~aI~~l~~~GI~v~i~TGr~ 344 (658)
++++|+||||+.... ..+ .+-|++.++|+.|+++|++++++|+.+
T Consensus 60 ~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 60 VAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp EEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred EEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 467899999987531 001 267999999999999999999999965
No 148
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=96.14 E-value=0.012 Score=55.50 Aligned_cols=40 Identities=20% Similarity=0.239 Sum_probs=33.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|+++|++++++|+... .+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5789999999999999999999999865 466777777763
No 149
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=96.12 E-value=0.0072 Score=62.25 Aligned_cols=43 Identities=21% Similarity=0.213 Sum_probs=38.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
++.|++.++++.|+++|++++++|+.+...+..+...+|+...
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~ 257 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY 257 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHh
Confidence 4567999999999999999999999999999988888888544
No 150
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=96.02 E-value=0.006 Score=60.29 Aligned_cols=64 Identities=13% Similarity=0.155 Sum_probs=51.5
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec---CChhHHHHHHHHcCcc-CCCccEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG---DKQDTAISIALSCKLL-TPDMQQII 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG---r~~~~a~~ia~~~gl~-~~~~~~i~ 366 (658)
..+++|+||||+.. +.+.+++.++|++++++|++++++|| |.........+.+|+. .....++.
T Consensus 15 k~i~~D~DGtL~~~----~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~ 82 (284)
T 2hx1_A 15 KCIFFDAFGVLKTY----NGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIIS 82 (284)
T ss_dssp SEEEECSBTTTEET----TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEE
T ss_pred CEEEEcCcCCcCcC----CeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEc
Confidence 45689999999984 34668999999999999999999995 7788888888888885 44344443
No 151
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=95.59 E-value=0.023 Score=55.33 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=32.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS 354 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~ 354 (658)
.+.|++.++++.|+++|++++++|+.+...+..+.+.
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~ 166 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH 166 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh
Confidence 6789999999999999999999999988777766553
No 152
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=94.82 E-value=0.0047 Score=57.22 Aligned_cols=59 Identities=17% Similarity=0.061 Sum_probs=49.0
Q ss_pred HHHhhhccceeeecccc--------------------ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 299 TAALIECDLTLLGATGI--------------------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~--------------------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
....+|+|+||+....- .-.++|++.+.++.+++. ++++++|.-....|..+...+++.
T Consensus 29 ~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~ 107 (195)
T 2hhl_A 29 KCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW 107 (195)
T ss_dssp CEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS
T ss_pred eEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc
Confidence 34568999999987321 124689999999999998 999999999999999999988863
No 153
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=94.19 E-value=0.016 Score=52.97 Aligned_cols=59 Identities=15% Similarity=0.041 Sum_probs=49.0
Q ss_pred HHHhhhccceeeecccc--------------------ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 299 TAALIECDLTLLGATGI--------------------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~--------------------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
....+|+|+||+....- .-.++|++.+.++.+.+. +.+++.|.-....|..+...++..
T Consensus 16 ~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~ 94 (181)
T 2ght_A 16 ICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW 94 (181)
T ss_dssp CEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT
T ss_pred eEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC
Confidence 34568999999986421 124799999999999998 999999999999999999988763
No 154
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=93.85 E-value=0.058 Score=54.83 Aligned_cols=56 Identities=20% Similarity=0.166 Sum_probs=43.1
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCCh----hHHHHHHHHcCccC
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQ----DTAISIALSCKLLT 359 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~----~~a~~ia~~~gl~~ 359 (658)
..++|+||||... +.+-|++.++|+.|+++|++++++|+.+. ..+..+.+.+|+-.
T Consensus 15 ~~l~D~DGvl~~g----~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~ 74 (352)
T 3kc2_A 15 AFAFDIDGVLFRG----KKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDV 74 (352)
T ss_dssp EEEECCBTTTEET----TEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCC
T ss_pred EEEEECCCeeEcC----CeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCC
Confidence 4679999999974 34568999999999999999999997653 33444555678743
No 155
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=92.36 E-value=0.076 Score=50.84 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=32.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
.+.|++.+.++.|+++|+++.++|++.. +..+...+|+..
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~ 134 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE 134 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc
Confidence 5789999999999999999999998754 455667777643
No 156
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=91.39 E-value=0.57 Score=41.68 Aligned_cols=45 Identities=16% Similarity=0.106 Sum_probs=29.9
Q ss_pred eeeecCChhHHHHHHHHHHc-CcEEEEEcCCeEEEEeCCcEEEEEEEE
Q 041225 151 IDYQGESPDEQALVSAASAY-GYTLFERTSGHIVIDINGEGLRLDVLG 197 (658)
Q Consensus 151 ~~~~~~~p~e~al~~~a~~~-g~~~~~~~~~~~~~~~~g~~~~~~il~ 197 (658)
++..|.||+.+|++++++.. +.... ..-.-+..+.|.+.+.++-.
T Consensus 32 lE~~SeHPlA~AIv~~a~~~~~~~~~--~~~~~f~~i~G~Gv~a~v~g 77 (165)
T 2arf_A 32 AEASSEHPLGVAVTKYCKEELGTETL--GYCTDFQAVPGCGIGCKVSN 77 (165)
T ss_dssp HHTTSCSTTHHHHHHHHHHHHTCCCC--CCEEEEEEETTTEEEEEEEC
T ss_pred HHccCCChHHHHHHHHHHHhcCCCCC--CCcCceEEecCccEEEEEcC
Confidence 44567799999999999765 43200 01122567899998887754
No 157
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=91.36 E-value=0.15 Score=54.98 Aligned_cols=26 Identities=27% Similarity=0.358 Sum_probs=24.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
.+.+++.++|+.|+++|++++++|+.
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 57789999999999999999999996
No 158
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=86.10 E-value=0.68 Score=44.50 Aligned_cols=34 Identities=6% Similarity=0.031 Sum_probs=27.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC 355 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~ 355 (658)
++.|++.+++++ |+++.++|..+...+..+....
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~ 158 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYV 158 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSB
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhh
Confidence 566777777776 9999999999988777776654
No 159
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=81.43 E-value=0.054 Score=54.75 Aligned_cols=38 Identities=0% Similarity=-0.147 Sum_probs=32.4
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
.++++|+||||++.-. . +++.+++..|+.++++|||+.
T Consensus 22 kli~fDlDGTLld~~~----~-----~~l~~~~~~g~~~~~~tGR~~ 59 (332)
T 1y8a_A 22 HMFFTDWEGPWILTDF----A-----LELCMAVFNNARFFSNLSEYD 59 (332)
T ss_dssp CEEEECSBTTTBCCCH----H-----HHHHHHHHCCHHHHHHHHHHH
T ss_pred eEEEEECcCCCcCccH----H-----HHHHHHHHCCCEEEEEcCCCc
Confidence 4678999999998632 1 789999999999999999987
No 160
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=78.55 E-value=4.8 Score=35.80 Aligned_cols=25 Identities=12% Similarity=0.317 Sum_probs=23.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
++.|++.+.++.|++. +++.++|+.
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~ 93 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAA 93 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCC
Confidence 6789999999999985 999999998
No 161
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=75.27 E-value=0.98 Score=41.08 Aligned_cols=40 Identities=10% Similarity=0.155 Sum_probs=35.3
Q ss_pred ccCCChHHHHHHHHhc-CCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQA-GIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~-GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.|++.++++.|+++ |++++++|+.+...+..+...+|+
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 6789999999999999 999999999988877777777665
No 162
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=75.23 E-value=1.9 Score=43.26 Aligned_cols=43 Identities=14% Similarity=0.104 Sum_probs=37.7
Q ss_pred cccCCChHHHHHHHH-hc----------CCeEEEEecCChhHHHHHHHHcCccC
Q 041225 317 DKLQDGVPEAIEALR-QA----------GIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 317 d~l~~~~~~aI~~l~-~~----------GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
.++.+....++.++. .+ |+.++++|||+...+..++.++|+..
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~ 95 (335)
T 3n28_A 42 HYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDY 95 (335)
T ss_dssp SCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEE
T ss_pred CCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCE
Confidence 378899999999988 33 89999999999999999999999854
No 163
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=67.52 E-value=3.7 Score=37.74 Aligned_cols=56 Identities=11% Similarity=-0.016 Sum_probs=47.7
Q ss_pred Hhhhccceeeeccc-----cccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 301 ALIECDLTLLGATG-----IEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 301 ~~~d~DgTllg~~~-----~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
..+|+|+||+-... ..-..||++.+.++.+. +++.++|.|.-....|..+...++.
T Consensus 37 LVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp 97 (204)
T 3qle_A 37 LVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDP 97 (204)
T ss_dssp EEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTST
T ss_pred EEEeccccEEeeeccccCceeEEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCC
Confidence 45799999998632 22368999999999998 7899999999999999999998875
No 164
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=66.28 E-value=2.3 Score=38.77 Aligned_cols=40 Identities=13% Similarity=0.071 Sum_probs=34.4
Q ss_pred ccCCChHHHHHHHHhc-CCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQA-GIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~-GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.|++.++++.|+++ |+++.++|+.+...+..+....|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 5789999999999999 999999999988776666666665
No 165
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=64.69 E-value=0.74 Score=43.75 Aligned_cols=63 Identities=8% Similarity=-0.083 Sum_probs=43.2
Q ss_pred HHHHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcceeEEecCccch------h-h-hhhccc-ccccccchHHH
Q 041225 476 KAGIVDLIKSR---TDDMTLAIGDGA-NDVSMIQMADVGVGICGQEGR------Q-A-VMASDF-AMGQFRFLKRL 538 (658)
Q Consensus 476 K~~~v~~L~~~---~~~~v~aiGDg~-NDi~Ml~~A~vgIam~~~~~~------~-~-k~~AD~-vl~~~~~l~~l 538 (658)
+..+++.+.++ +++++++|||+. ||+.|.+.||+++++-..... + . ...+|+ ++.++.-+..+
T Consensus 164 ~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 239 (251)
T 2pke_A 164 DPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAA 239 (251)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHH
T ss_pred CHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHH
Confidence 46666666655 578999999999 999999999999866322110 0 1 235787 78877665444
No 166
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=57.06 E-value=1.4 Score=41.00 Aligned_cols=64 Identities=13% Similarity=0.170 Sum_probs=42.4
Q ss_pred HHHHHHHHHhc-----CCCeEEEEcCCcCChhhhhhccee-EEec-Cccchh-hhh-hcccccccccchHHHH
Q 041225 476 KAGIVDLIKSR-----TDDMTLAIGDGANDVSMIQMADVG-VGIC-GQEGRQ-AVM-ASDFAMGQFRFLKRLL 539 (658)
Q Consensus 476 K~~~v~~L~~~-----~~~~v~aiGDg~NDi~Ml~~A~vg-Iam~-~~~~~~-~k~-~AD~vl~~~~~l~~l~ 539 (658)
+..+++.+.++ +++++++|||+.||++|.+.||++ |++. ++.... .+. .||+++.++.-+..++
T Consensus 153 ~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l 225 (234)
T 2hcf_A 153 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHH
Confidence 34555555442 357899999999999999999966 3432 322222 222 3899998887765553
No 167
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=53.99 E-value=0.53 Score=43.88 Aligned_cols=49 Identities=12% Similarity=-0.029 Sum_probs=38.9
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHH
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISI 351 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~i 351 (658)
.+++|+||||+.. +..+.+...++++.+.+.|..+..+||+........
T Consensus 4 ~i~fDlDGTL~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 52 (230)
T 3vay_A 4 LVTFDLDDTLWDT---APAIVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSR 52 (230)
T ss_dssp EEEECCBTTTBCS---HHHHHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHH
T ss_pred EEEecCcccCcCC---chHHHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHH
Confidence 3578999999987 345666777899999999999888898887665443
No 168
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=51.52 E-value=7.2 Score=39.51 Aligned_cols=39 Identities=10% Similarity=0.124 Sum_probs=35.4
Q ss_pred cCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 319 LQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 319 l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
+||++.+.++.+. .++.++|.|.-....|.++.+.++..
T Consensus 76 ~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~ 114 (372)
T 3ef0_A 76 FRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPT 114 (372)
T ss_dssp ECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTT
T ss_pred ECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccC
Confidence 4899999999998 88999999999999999999988753
No 169
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=48.34 E-value=1.5e+02 Score=27.32 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=68.2
Q ss_pred HHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHH
Q 041225 248 TQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAI 327 (658)
Q Consensus 248 ~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI 327 (658)
+...+......+-++-+++|......- . .....++.|...... .-.+++.++|
T Consensus 95 il~aL~~a~~~~~kIavVg~~~~~~~~-~---------------------~i~~ll~~~i~~~~~-----~~~ee~~~~i 147 (225)
T 2pju_A 95 VLQFLAKAGKLTSSIGVVTYQETIPAL-V---------------------AFQKTFNLRLDQRSY-----ITEEDARGQI 147 (225)
T ss_dssp HHHHHHHTTCTTSCEEEEEESSCCHHH-H---------------------HHHHHHTCCEEEEEE-----SSHHHHHHHH
T ss_pred HHHHHHHHHhhCCcEEEEeCchhhhHH-H---------------------HHHHHhCCceEEEEe-----CCHHHHHHHH
Confidence 445555666667799999999886641 1 122346677666654 2345678999
Q ss_pred HHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHH
Q 041225 328 EALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKA 384 (658)
Q Consensus 328 ~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~ 384 (658)
+++++.|+.+++-.| .+..+|++.|+. .+...+ .+.+.+.++....
T Consensus 148 ~~l~~~G~~vVVG~~----~~~~~A~~~Gl~-----~vlI~s--~eSI~~Ai~eA~~ 193 (225)
T 2pju_A 148 NELKANGTEAVVGAG----LITDLAEEAGMT-----GIFIYS--AATVRQAFSDALD 193 (225)
T ss_dssp HHHHHTTCCEEEESH----HHHHHHHHTTSE-----EEESSC--HHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEECCH----HHHHHHHHcCCc-----EEEECC--HHHHHHHHHHHHH
Confidence 999999999987644 457788999973 344553 6888888877665
No 170
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=41.93 E-value=1.9e+02 Score=25.83 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=65.9
Q ss_pred HHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHH
Q 041225 247 ITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEA 326 (658)
Q Consensus 247 ~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~a 326 (658)
.+.+.+......+-++-+++|......- . .....++.|.+.... .-.+++.++
T Consensus 82 Dil~al~~a~~~~~kIavvg~~~~~~~~-~---------------------~~~~ll~~~i~~~~~-----~~~~e~~~~ 134 (196)
T 2q5c_A 82 DTMRAVYNAKRFGNELALIAYKHSIVDK-H---------------------EIEAMLGVKIKEFLF-----SSEDEITTL 134 (196)
T ss_dssp HHHHHHHHHGGGCSEEEEEEESSCSSCH-H---------------------HHHHHHTCEEEEEEE-----CSGGGHHHH
T ss_pred HHHHHHHHHHhhCCcEEEEeCcchhhHH-H---------------------HHHHHhCCceEEEEe-----CCHHHHHHH
Confidence 3445566666677799999999876541 1 122345667666654 334577899
Q ss_pred HHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHH
Q 041225 327 IEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKA 384 (658)
Q Consensus 327 I~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~ 384 (658)
++++++.|+.+++-.| .+..+|++.|+.. +.. ....+.+++.++....
T Consensus 135 i~~l~~~G~~vvVG~~----~~~~~A~~~Gl~~-----vli-~sg~eSI~~Ai~eA~~ 182 (196)
T 2q5c_A 135 ISKVKTENIKIVVSGK----TVTDEAIKQGLYG-----ETI-NSGEESLRRAIEEALN 182 (196)
T ss_dssp HHHHHHTTCCEEEECH----HHHHHHHHTTCEE-----EEC-CCCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCeEEECCH----HHHHHHHHcCCcE-----EEE-ecCHHHHHHHHHHHHH
Confidence 9999999999987643 4577888998731 221 2346666666666554
No 171
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=39.97 E-value=2.7 Score=38.98 Aligned_cols=59 Identities=14% Similarity=0.159 Sum_probs=41.0
Q ss_pred HHHHHHHHHhc---CCC-eEEEEcCCcCChhhhhhcce-eEEecCccchhhhhhcccccccccchHHH
Q 041225 476 KAGIVDLIKSR---TDD-MTLAIGDGANDVSMIQMADV-GVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 476 K~~~v~~L~~~---~~~-~v~aiGDg~NDi~Ml~~A~v-gIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
|..+++.+.++ +++ ++++|||+.||++|.+.||+ +|++ ++... ..+++++.++.-+..+
T Consensus 161 ~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~-~~~~~---~~~~~~~~~~~el~~~ 224 (231)
T 3kzx_A 161 SPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKY-GSTNI---IKDILSFKNFYDIRNF 224 (231)
T ss_dssp SSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEE-CC--------CCEEESSHHHHHHH
T ss_pred ChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEE-CCCCC---CCCceeeCCHHHHHHH
Confidence 35666666655 566 89999999999999999997 5566 54432 4677888887666554
No 172
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=39.22 E-value=64 Score=27.05 Aligned_cols=81 Identities=9% Similarity=0.061 Sum_probs=47.9
Q ss_pred HHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHh
Q 041225 253 SEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQ 332 (658)
Q Consensus 253 ~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~ 332 (658)
..|...|++|+-++. ..+.+++.+ .+...+-| +++..+....-.+..++.++.|++
T Consensus 25 ~~l~~~G~~Vi~lG~-~~p~e~~v~---------------------~a~~~~~d--~v~lS~~~~~~~~~~~~~i~~l~~ 80 (137)
T 1ccw_A 25 HAFTNAGFNVVNIGV-LSPQELFIK---------------------AAIETKAD--AILVSSLYGQGEIDCKGLRQKCDE 80 (137)
T ss_dssp HHHHHTTCEEEEEEE-EECHHHHHH---------------------HHHHHTCS--EEEEEECSSTHHHHHTTHHHHHHH
T ss_pred HHHHHCCCEEEECCC-CCCHHHHHH---------------------HHHhcCCC--EEEEEecCcCcHHHHHHHHHHHHh
Confidence 356778999998887 456655432 12223344 444433333333456678888888
Q ss_pred cCC--eEEEEecCC------hhHHHHHHHHcCc
Q 041225 333 AGI--KVWVLTGDK------QDTAISIALSCKL 357 (658)
Q Consensus 333 ~GI--~v~i~TGr~------~~~a~~ia~~~gl 357 (658)
+|. ..+++-|.. +......+++.|.
T Consensus 81 ~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~ 113 (137)
T 1ccw_A 81 AGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGY 113 (137)
T ss_dssp TTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTC
T ss_pred cCCCCCEEEEECCCcCchHhhhhhHHHHHHCCC
Confidence 875 345677864 2223556788887
No 173
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=35.97 E-value=17 Score=35.80 Aligned_cols=58 Identities=7% Similarity=0.017 Sum_probs=48.4
Q ss_pred HHhhhccceeeeccc----cccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 300 AALIECDLTLLGATG----IEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 300 ~~~~d~DgTllg~~~----~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
...+|+|+||+.... ..-..||.+.+.++.+. .++.+++.|.-....|.++...++..
T Consensus 142 tLVLDLDeTLvh~~~~~~~~~~~~RP~l~eFL~~l~-~~yeivIfTas~~~ya~~vld~Ld~~ 203 (320)
T 3shq_A 142 LLVLDIDYTLFDHRSPAETGTELMRPYLHEFLTSAY-EDYDIVIWSATSMRWIEEKMRLLGVA 203 (320)
T ss_dssp EEEECCBTTTBCSSSCCSSHHHHBCTTHHHHHHHHH-HHEEEEEECSSCHHHHHHHHHHTTCT
T ss_pred EEEEeccccEEcccccCCCcceEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCC
Confidence 345799999998642 12247999999999998 67999999999999999999998764
No 174
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=34.36 E-value=1.2 Score=41.46 Aligned_cols=34 Identities=18% Similarity=0.091 Sum_probs=24.8
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCe
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIK 336 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~ 336 (658)
.+++|+||||+.. +..+......+++.+++.|+.
T Consensus 4 ~i~fDlDGTL~d~---~~~~~~~~~~~~~~~~~~g~~ 37 (234)
T 3u26_A 4 AVFFDSLGTLNSV---EGAAKSHLKIMEEVLGDYPLN 37 (234)
T ss_dssp EEEECSTTTTBCH---HHHHHHHHHHHHHHCSSSSSC
T ss_pred EEEEcCCCccccc---cchhHHHHHHHHHHHhhcCCC
Confidence 3578999999987 334555566777778888874
No 175
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=31.14 E-value=19 Score=30.16 Aligned_cols=84 Identities=19% Similarity=0.307 Sum_probs=53.1
Q ss_pred cceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCch
Q 041225 149 EAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADS 228 (658)
Q Consensus 149 ~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e 228 (658)
..+.|.|+=-+|..|++.|.-+-+... .+..-++.-+..+.++.-+.|.-.+.+-||.-
T Consensus 35 AdL~Y~GSITID~dLldaAgIl~~EkV---------------------~IvNvnNG~RfeTYvI~GerGSG~I~lNGAAA 93 (143)
T 1pqh_A 35 ADLHYEGTCAIDQDFLDAAGILENEAI---------------------DIWNVTNGKRFSTYAIAAERGSRIISVNGAAA 93 (143)
T ss_dssp CCSSSCCCEEEEHHHHHHHTCCTTCEE---------------------EEEETTTCCEEEEEEEEECTTCCCEECCGGGG
T ss_pred cccccceeEEECHHHHHHcCCCCCCEE---------------------EEEECCCCceEEEEEEEccCCCceEEechHHH
Confidence 467888877899999999865433221 22223333333344555555555555666653
Q ss_pred HhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHH
Q 041225 229 SMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQW 278 (658)
Q Consensus 229 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~ 278 (658)
. +..-|-+++++||-.++++|...|
T Consensus 94 r-------------------------l~~~GD~VII~sYa~~~~~E~~~~ 118 (143)
T 1pqh_A 94 H-------------------------CASVGDIVIIASFVTMPDEEARTW 118 (143)
T ss_dssp G-------------------------TCCTTCEEEEEEEEEEEHHHHTTC
T ss_pred c-------------------------cCCCCCEEEEEECccCCHHHhccC
Confidence 2 344588999999999999886543
No 176
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=30.89 E-value=45 Score=31.76 Aligned_cols=56 Identities=13% Similarity=0.078 Sum_probs=35.4
Q ss_pred HHHHHHH---hcCCCeEEEEcCCc-CChhhhhhcceeE-Eec-Ccc-chhhh-------hhccccccccc
Q 041225 478 GIVDLIK---SRTDDMTLAIGDGA-NDVSMIQMADVGV-GIC-GQE-GRQAV-------MASDFAMGQFR 533 (658)
Q Consensus 478 ~~v~~L~---~~~~~~v~aiGDg~-NDi~Ml~~A~vgI-am~-~~~-~~~~k-------~~AD~vl~~~~ 533 (658)
.+++.+. ..+++++++|||+. +|+.+=+.||+.. .+. |.. ..... ..+|+++.+..
T Consensus 212 ~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~ 281 (284)
T 2hx1_A 212 FAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAV 281 (284)
T ss_dssp HHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSC
T ss_pred HHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchh
Confidence 3445552 22467899999995 9999999999864 442 221 11222 35788776653
No 177
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=29.96 E-value=3.6 Score=37.81 Aligned_cols=33 Identities=21% Similarity=0.219 Sum_probs=26.2
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAG 334 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~G 334 (658)
..+++|+||||+.. +..+.+.+.++++.+++.|
T Consensus 9 k~i~fDlDGTL~~~---~~~~~~~~~~~~~~l~~~g 41 (234)
T 3ddh_A 9 KVIAFDADDTLWSN---EPFFQEVEKQYTDLLKPYG 41 (234)
T ss_dssp CEEEECCBTTTBCC---HHHHHHHHHHHHHHTGGGS
T ss_pred cEEEEeCCCCCccC---cchHHHHHHHHHHHHHhcC
Confidence 45789999999987 4456667777888898888
No 178
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=28.63 E-value=2.2e+02 Score=23.53 Aligned_cols=69 Identities=13% Similarity=0.118 Sum_probs=46.9
Q ss_pred hccceeeeccccccccCCChHHHHHHHHh----cCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHH
Q 041225 304 ECDLTLLGATGIEDKLQDGVPEAIEALRQ----AGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLL 379 (658)
Q Consensus 304 d~DgTllg~~~~~d~l~~~~~~aI~~l~~----~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii 379 (658)
..|..+++..- +.-+=.+.++++|+ ..++|+++||........-+.+.|... +...+.+.+++...+
T Consensus 57 ~~DlillD~~M----P~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~-----yl~KP~~~~~L~~~i 127 (134)
T 3to5_A 57 DFDFVVTDWNM----PGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNG-----YIVKPFTAATLKEKL 127 (134)
T ss_dssp CCSEEEEESCC----SSSCHHHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHTTCCE-----EEESSCCHHHHHHHH
T ss_pred CCCEEEEcCCC----CCCCHHHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHCCCCE-----EEECCCCHHHHHHHH
Confidence 46778887622 22345788888886 468899999998877777777787632 344566766666655
Q ss_pred HH
Q 041225 380 AD 381 (658)
Q Consensus 380 ~~ 381 (658)
+.
T Consensus 128 ~~ 129 (134)
T 3to5_A 128 DK 129 (134)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 179
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=28.27 E-value=2.4 Score=38.86 Aligned_cols=29 Identities=7% Similarity=-0.090 Sum_probs=21.0
Q ss_pred HHHHHHHhcCCCeEEEEcCCcCChhhhhhc
Q 041225 478 GIVDLIKSRTDDMTLAIGDGANDVSMIQMA 507 (658)
Q Consensus 478 ~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A 507 (658)
.-+..++.. +-.+++++.|.|..+.++.+
T Consensus 173 nDi~~~~~a-G~~~~~~~~~~~~~~~l~~~ 201 (225)
T 3d6j_A 173 VDAGTAAAA-GVSFTGVTSGMTTAQEFQAY 201 (225)
T ss_dssp HHHHHHHHH-TCEEEEETTSSCCTTGGGGS
T ss_pred HHHHHHHHC-CCeEEEECCCCCChHHHhhc
Confidence 456666665 45788899998888887764
No 180
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=27.25 E-value=1.7e+02 Score=27.15 Aligned_cols=62 Identities=13% Similarity=0.169 Sum_probs=45.2
Q ss_pred HHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhc
Q 041225 325 EAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARY 386 (658)
Q Consensus 325 ~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~ 386 (658)
...++|.++|.+++++.+|+...+..++..+.-....-..+..+-.+.+.++++++...+.+
T Consensus 19 aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 19 AAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56678899999999888999888877776653222233345556778889999998887654
No 181
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=27.00 E-value=1.5e+02 Score=27.62 Aligned_cols=63 Identities=13% Similarity=0.112 Sum_probs=45.9
Q ss_pred HHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhc
Q 041225 324 PEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARY 386 (658)
Q Consensus 324 ~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~ 386 (658)
....+.|.++|.+++++++|+...+...+..+.-...+-..+..+-.+.+.++++++...+.+
T Consensus 40 ~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 40 RAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 467788999999999999999877776665543222334456667778888888888776653
No 182
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=24.60 E-value=2.4e+02 Score=24.16 Aligned_cols=80 Identities=16% Similarity=0.194 Sum_probs=49.2
Q ss_pred HHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhc
Q 041225 254 EYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQA 333 (658)
Q Consensus 254 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~ 333 (658)
.+...|++|+.++.. .+.+++.+ .+. +.+-.+++.......-.+..++.++.|+++
T Consensus 41 ~l~~~G~eVi~lG~~-~p~e~lv~---------------------aa~--~~~~diV~lS~~~~~~~~~~~~~i~~L~~~ 96 (161)
T 2yxb_A 41 ALRDAGFEVVYTGLR-QTPEQVAM---------------------AAV--QEDVDVIGVSILNGAHLHLMKRLMAKLREL 96 (161)
T ss_dssp HHHHTTCEEECCCSB-CCHHHHHH---------------------HHH--HTTCSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH---------------------HHH--hcCCCEEEEEeechhhHHHHHHHHHHHHhc
Confidence 456789999987754 45544322 222 233445554443334446778899999998
Q ss_pred CC--eEEEEecCChhHHHHHHHHcCc
Q 041225 334 GI--KVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 334 GI--~v~i~TGr~~~~a~~ia~~~gl 357 (658)
|. ..+++-|.....-...+++.|.
T Consensus 97 g~~~i~v~vGG~~~~~~~~~l~~~G~ 122 (161)
T 2yxb_A 97 GADDIPVVLGGTIPIPDLEPLRSLGI 122 (161)
T ss_dssp TCTTSCEEEEECCCHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCchhcHHHHHHCCC
Confidence 74 3466678766554555677776
No 183
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=23.33 E-value=23 Score=31.11 Aligned_cols=23 Identities=26% Similarity=0.476 Sum_probs=16.8
Q ss_pred cccccceEEEeccCcccccceEE
Q 041225 36 EDLGQIRYIFSDKTGTLTENKME 58 (658)
Q Consensus 36 e~Lg~v~~i~~DKTGTLT~n~m~ 58 (658)
|.+..++.|++|--||||.+.+.
T Consensus 4 ~~~~~ikliv~D~DGtL~d~~~~ 26 (168)
T 3ewi_A 4 EKLKEIKLLVCNIDGCLTNGHIY 26 (168)
T ss_dssp ---CCCCEEEEECCCCCSCSCCB
T ss_pred hhHhcCcEEEEeCccceECCcEE
Confidence 56677889999999999987653
No 184
>1nnx_A Protein YGIW; structural genomics, hypothetical protein, OB-fold, structure 2 function project, S2F, unknown function; 1.45A {Escherichia coli} SCOP: b.40.10.1
Probab=22.72 E-value=35 Score=27.52 Aligned_cols=27 Identities=26% Similarity=0.434 Sum_probs=23.0
Q ss_pred eeeccCCcccccccceEEEeccCcccc
Q 041225 27 FQCRTLSINEDLGQIRYIFSDKTGTLT 53 (658)
Q Consensus 27 i~vr~~~~~e~Lg~v~~i~~DKTGTLT 53 (658)
-++=...+++.+|.=.|+|.|+||+++
T Consensus 39 ~V~L~G~Iv~~~~~d~Y~F~D~TG~I~ 65 (109)
T 1nnx_A 39 WVTLRGNIVERISDDLYVFKDASGTIN 65 (109)
T ss_dssp EEEEEEEEEEEEETTEEEEEETTEEEE
T ss_pred eEEEEEEEEEEeCCCeEEEECCCccEE
Confidence 445567888999999999999999876
No 185
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=21.61 E-value=2e+02 Score=26.87 Aligned_cols=63 Identities=8% Similarity=0.076 Sum_probs=44.3
Q ss_pred HHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhc
Q 041225 324 PEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARY 386 (658)
Q Consensus 324 ~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~ 386 (658)
....++|.++|.+++++.+|+......+...+.-....-..+..+-.+.+.++++++...+.+
T Consensus 40 ~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 40 AAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 366778899999999988999887776665543222222344456678888888888877654
No 186
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=21.42 E-value=3.3e+02 Score=22.12 Aligned_cols=74 Identities=12% Similarity=0.065 Sum_probs=51.3
Q ss_pred hccceeeeccccccccCCChHHHHHHHHh----cCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHH
Q 041225 304 ECDLTLLGATGIEDKLQDGVPEAIEALRQ----AGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLL 379 (658)
Q Consensus 304 d~DgTllg~~~~~d~l~~~~~~aI~~l~~----~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii 379 (658)
..|.-+++... ...+-.+.++++++ .+++++++|+........-+.+.|.. -+...+.+.+.+...+
T Consensus 59 ~~dliilD~~l----~~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~-----~~l~KP~~~~~l~~~i 129 (152)
T 3heb_A 59 RAQLVLLDLNL----PDMTGIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGAN-----VYITKPVNYENFANAI 129 (152)
T ss_dssp CBEEEEECSBC----SSSBHHHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCS-----EEEECCSSHHHHHHHH
T ss_pred CCCEEEEeCCC----CCCcHHHHHHHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCc-----EEEeCCCCHHHHHHHH
Confidence 35666666421 22456788999988 46789999998877666667777753 2455677888888888
Q ss_pred HHHHHhc
Q 041225 380 ADAKARY 386 (658)
Q Consensus 380 ~~~~~~~ 386 (658)
+.+...+
T Consensus 130 ~~~~~~~ 136 (152)
T 3heb_A 130 RQLGLFF 136 (152)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776543
No 187
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=20.21 E-value=38 Score=27.22 Aligned_cols=81 Identities=11% Similarity=0.166 Sum_probs=51.0
Q ss_pred cceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCch
Q 041225 149 EAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADS 228 (658)
Q Consensus 149 ~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e 228 (658)
..+.|.|+=-+|..|++.|.-+-+.. +.+..-++.-+..+.++..+.|.-.+.+-||.-
T Consensus 21 a~L~Y~GSitID~~Ll~aA~i~~~E~---------------------V~I~NvnNG~Rf~TYvI~GerGSg~I~lNGAAA 79 (114)
T 3oug_A 21 KDLFYVGSITIDSEIMKQANIIENEK---------------------VQVVNLNNGERLETYVIKGEPNSKTIALNGPAA 79 (114)
T ss_dssp EESSCC-CEEEEHHHHHHTTCCTTBE---------------------EEEEETTTCCEEEEEEEEECTTSCCEEEEGGGG
T ss_pred ccccccceEEECHHHHHHcCCCcCCE---------------------EEEEECCCCceEEEEEEEccCCCCEEEeCCHHH
Confidence 46788887779999999886443322 222333333344445556555555566677654
Q ss_pred HhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHH
Q 041225 229 SMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEEL 275 (658)
Q Consensus 229 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~ 275 (658)
. +..-|-+++++||..++++|.
T Consensus 80 r-------------------------~~~~GD~vII~ay~~~~~~e~ 101 (114)
T 3oug_A 80 R-------------------------RCEIGDQLFIISYTQVDPTRE 101 (114)
T ss_dssp G-------------------------GCCTTCEEEEEEEEEECTTSC
T ss_pred h-------------------------ccCCCCEEEEEECCcCCHHHH
Confidence 3 344588999999999988763
Done!