BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041227
(1468 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9PTD7|CING_XENLA Cingulin OS=Xenopus laevis GN=cgn PE=1 SV=2
Length = 1360
Score = 42.7 bits (99), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 34/174 (19%)
Query: 889 DKLKSDNLRKEEEVEALRHCQNELENQISDLQKEKSQLEESIEIMLREGTVASKCLND-- 946
++L+S+ + ++E E L +++Q+ + EK + EE++ RE +V L D
Sbjct: 775 EQLQSEVMHVKKENEGLAKESRRIQDQLKQVLLEKQRHEETVHQRERELSVLKGALKDEV 834
Query: 947 -------------LQSEIMVLHRDMDSQVSVNRNLESKSLELESSKHEMEVHLHELEEEN 993
L+ + ++ R + V +N+ LES+ +LE + +E +L E EEN
Sbjct: 835 SGRDRETEKLRERLEQDALMTKRSYEELVKINKRLESEKTDLERVRQVIENNLQESREEN 894
Query: 994 LQLSERICGLEAQLRYLTN------ERESSRLELENSATHAMSLQDEIRRLEAE 1041
L +I GLEAQL+ TN +R SR L+D+I +LEAE
Sbjct: 895 DDLRRKILGLEAQLKE-TNTFCDDLQRAESR------------LKDKINKLEAE 935
>sp|B1WB65|CING_XENTR Cingulin OS=Xenopus tropicalis GN=cgn PE=2 SV=1
Length = 1251
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 875 TETAKELLEKIAEIDKLKSDNLRKEEEVEALRHCQNELENQISDLQKEKSQLEESIEIML 934
TE +E L+ +E+ + K DN E L +++Q+ + EK + EE++
Sbjct: 659 TERLREQLQ--SEVVQFKKDN-------ENLGRESQRIQDQLKQVLLEKQRHEEAVHQRE 709
Query: 935 REGTVASKCLND---------------LQSEIMVLHRDMDSQVSVNRNLESKSLELESSK 979
RE + L D + + M R + V +N+ LES+ ++LE +
Sbjct: 710 RELSALKGALKDEVSGRDREAERLRAQFEQDAMQTKRSYEELVKINKRLESEKVDLERVR 769
Query: 980 HEMEVHLHELEEENLQLSERICGLEAQLR 1008
+E +L E EEN L +I GLEAQL+
Sbjct: 770 QVIENNLQESREENDDLRRKILGLEAQLK 798
>sp|P24733|MYS_ARGIR Myosin heavy chain, striated muscle OS=Argopecten irradians PE=1 SV=1
Length = 1938
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 120/567 (21%), Positives = 241/567 (42%), Gaps = 99/567 (17%)
Query: 869 EFKSDVTETAKELLEKIAEIDKLKSDNLRKEEEVEALRHCQNELENQISDLQKEKSQLEE 928
+F+S +++ L + I++L+S R + E L + E+++S L KEKSQL
Sbjct: 1248 QFESQMSDLNARLEDSQRSINELQSQKSRLQAENSDLTRQLEDAEHRVSVLSKEKSQLSS 1307
Query: 929 SIEIMLREGTVASKCLNDLQSEIMVLHRDMDSQVSVNRNLESKSLELESSKHEMEVHLHE 988
+E R ++ + LQ+E+ +H DMD+
Sbjct: 1308 QLEDARRSLEEETRARSKLQNEVRNMHADMDA---------------------------- 1339
Query: 989 LEEENLQLSERICGLEAQLRYLTNERESSRLELENSATHAMSLQDEIRRLEAEMEAQKVE 1048
+R E + S+ +++ + A +EI++ ++ E++
Sbjct: 1340 ------------------IREQLEEEQESKSDVQRQLSKA---NNEIQQWRSKFESEGAN 1378
Query: 1049 TKQKLQDMQKRWLGVQEECEYLKVANPKLQATAEGLIEECSLLQKSNAELRKQKVNLHEH 1108
++L+D +++ LG E E T E +CS L+K+ + L+++ ++
Sbjct: 1379 RTEELEDQKRKLLGKLSEAE----------QTTEAANAKCSALEKAKSRLQQELEDMSIE 1428
Query: 1109 CAVLEAQLGESEK---GFSSLSMKVEALEEKYLSMLEEISSKEKALNLELDALLHENRKH 1165
A + + EK F + + +A S LE + + + EL +
Sbjct: 1429 VDRANASVNQMEKKQRAFDKTTAEWQAKVNSLQSELENSQKESRGYSAEL---------Y 1479
Query: 1166 KDKSVTEESLLNQMYMEKTVEAQNLQREVAHLTEQISATYDEKDGTHSEAVLEVSHLR-- 1223
+ K+ EE + + + E +NL E+ LT+Q+S +G S L+ + R
Sbjct: 1480 RIKASIEEYQDSIGALRR--ENKNLADEIHDLTDQLS------EGGRSTHELDKARRRLE 1531
Query: 1224 ADKAVLEAALQEVQGKLKLSESN-------LGTLRMESQTKIQQLKSELAAARQNQ---- 1272
+K L+AAL+E +G L+ E+ + T+R E +IQ+ + E R+N
Sbjct: 1532 MEKEELQAALEEAEGALEQEEAKVMRAQLEIATVRNEIDKRIQEKEEEFDNTRRNHQRAL 1591
Query: 1273 EVLMADHEKLLNLLEDVKPNEEKFRGTIRGLELKLKASDYERLQLTEEISSLKVQLERTA 1332
E + A E D ++K I LE+ L AS+ + ++ + + + Q+
Sbjct: 1592 ESMQASLEAEAKGKADAMRIKKKLEQDINELEVALDASNRGKAEMEKTVKRYQQQIR--- 1648
Query: 1333 QFQDEVLSLKKLLNEAKFENERLEASFQILSGDYEELKA--ERISFMQKISTSQ--QVVS 1388
+ Q + ++ +EA+ E ++SG+ EEL+A E+ +K S ++
Sbjct: 1649 EMQTSIEEEQRQRDEARESYNMAERRCTLMSGEVEELRAALEQAERARKASDNELADAND 1708
Query: 1389 ELDDCKRKKVALQEKVLRLEGDLAAIE 1415
+++ + ++Q + +LEGD+ A++
Sbjct: 1709 RVNELTSQVSSVQGQKRKLEGDINAMQ 1735
>sp|Q9JLT0|MYH10_RAT Myosin-10 OS=Rattus norvegicus GN=Myh10 PE=1 SV=1
Length = 1976
Score = 36.2 bits (82), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 911 ELENQISDLQKEKS---QLEESIEIMLREGTVASKCLNDLQSEIMVLHRDMDSQV-SVNR 966
ELE ++ D +K+++ ++ +EI L++ + N + E++ R + +Q+ R
Sbjct: 1600 ELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQAQMKDYQR 1659
Query: 967 NLESKSL---ELESSKHEMEVHLHELEEENLQLSERICGLEAQLRYLTNERESSRLELEN 1023
LE E+ + E E L LE E LQL E + E R+ ER+ E+ N
Sbjct: 1660 ELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEIAN 1719
Query: 1024 SATHAMSLQDEIRRLEAEM 1042
SA+ +L DE RRLEA +
Sbjct: 1720 SASGKSALLDEKRRLEARI 1738
>sp|Q27991|MYH10_BOVIN Myosin-10 OS=Bos taurus GN=MYH10 PE=2 SV=2
Length = 1976
Score = 36.2 bits (82), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 911 ELENQISDLQKEKS---QLEESIEIMLREGTVASKCLNDLQSEIMVLHRDMDSQV-SVNR 966
ELE ++ D +K+++ ++ +EI L++ + N + E++ R + +Q+ R
Sbjct: 1600 ELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQAQMKDYQR 1659
Query: 967 NLESKSL---ELESSKHEMEVHLHELEEENLQLSERICGLEAQLRYLTNERESSRLELEN 1023
LE E+ + E E L LE E LQL E + E R+ ER+ E+ N
Sbjct: 1660 ELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEIAN 1719
Query: 1024 SATHAMSLQDEIRRLEAEM 1042
SA+ +L DE RRLEA +
Sbjct: 1720 SASGKSALLDEKRRLEARI 1738
>sp|P35580|MYH10_HUMAN Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3
Length = 1976
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 911 ELENQISDLQKEKS---QLEESIEIMLREGTVASKCLNDLQSEIMVLHRDMDSQV-SVNR 966
ELE ++ D +K+++ ++ +EI L++ + N + E++ R + +Q+ R
Sbjct: 1600 ELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQAQMKDYQR 1659
Query: 967 NLESKSL---ELESSKHEMEVHLHELEEENLQLSERICGLEAQLRYLTNERESSRLELEN 1023
LE E+ + E E L LE E LQL E + E R+ ER+ E+ N
Sbjct: 1660 ELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEITN 1719
Query: 1024 SATHAMSLQDEIRRLEAEM 1042
SA+ +L DE RRLEA +
Sbjct: 1720 SASGKSALLDEKRRLEARI 1738
>sp|Q61879|MYH10_MOUSE Myosin-10 OS=Mus musculus GN=Myh10 PE=1 SV=2
Length = 1976
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 911 ELENQISDLQKEKS---QLEESIEIMLREGTVASKCLNDLQSEIMVLHRDMDSQV-SVNR 966
ELE ++ D +K+++ ++ +EI L++ + N + E++ R + +Q+ R
Sbjct: 1600 ELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQAQMKDYQR 1659
Query: 967 NLESKSL---ELESSKHEMEVHLHELEEENLQLSERICGLEAQLRYLTNERESSRLELEN 1023
LE E+ + E E L LE E LQL E + E R+ ER+ E+ N
Sbjct: 1660 ELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEIAN 1719
Query: 1024 SATHAMSLQDEIRRLEAEM 1042
SA+ +L DE RRLEA +
Sbjct: 1720 SASGKSALLDEKRRLEARI 1738
>sp|Q15643|TRIPB_HUMAN Thyroid receptor-interacting protein 11 OS=Homo sapiens GN=TRIP11
PE=1 SV=3
Length = 1979
Score = 34.7 bits (78), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 120/233 (51%), Gaps = 37/233 (15%)
Query: 903 EALRHCQNELE-----NQISDLQKEKSQLEESIEIMLREGTVASKCLNDLQSEIMVLH-- 955
+AL +NE+ NQ + L ++ +L+ IE++ +E ++ S+ +LQ ++ L+
Sbjct: 392 QALSDAENEIMRLSSLNQDNSLAEDNLKLKMRIEVLEKEKSLLSQEKEELQMSLLKLNNE 451
Query: 956 ---------RD--MDSQVSVNR-NLESKSLELESSKHEMEVHLHELEE---ENLQLSERI 1000
RD +DS++ R NLE+K EL S E E + E+EE +N + ++ +
Sbjct: 452 YEVIKSTATRDISLDSELHDLRLNLEAKEQELNQSISEKETLIAEIEELDRQNQEATKHM 511
Query: 1001 CGLEAQLRYLTNERES--SRLELENSATHAMSLQDEIRRLEAEMEAQKVETKQKLQDMQK 1058
++ QL NE +S S+L+ L DE +R+ ++E K++ ++L D+QK
Sbjct: 512 ILIKDQLSKQQNEGDSIISKLK--------QDLNDEKKRVH-QLEDDKMDITKEL-DVQK 561
Query: 1059 RWLGVQEECEY--LKVANPKLQATAEGLIEECSLLQKSNAELRKQKVNLHEHC 1109
L +Q E L + KL+ E L+++ + Q+SN ++K+ + L EH
Sbjct: 562 EKL-IQSEVALNDLHLTKQKLEDKVENLVDQLNKSQESNVSIQKENLELKEHI 613
>sp|Q6VGS5|DAPLE_MOUSE Protein Daple OS=Mus musculus GN=Ccdc88c PE=1 SV=1
Length = 2009
Score = 33.9 bits (76), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 159 GTFNRSIGSSSSNQLDGTYHAGEPNSRTMSFSPSGSRNSFDSVEGSSGRETHSPLSYLSG 218
G GS +D T + +P ++ P GSR +F + ++ + +P+ G
Sbjct: 1474 GDLKPKRGSPRGGSVDRTDTSTDPAVKSWPSEP-GSR-TFSTSATTAALSSSTPIPKHLG 1531
Query: 219 LTNNFAGRQDPIGSPSSSPHGSYSFNDASRSN 250
T D + PSS P G Y ASR N
Sbjct: 1532 RTKG-CNSDDNLCEPSSEPDGPYHRQQASRPN 1562
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.125 0.329
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 481,826,242
Number of Sequences: 539616
Number of extensions: 19961783
Number of successful extensions: 138219
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 3976
Number of HSP's that attempted gapping in prelim test: 92760
Number of HSP's gapped (non-prelim): 23756
length of query: 1468
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1338
effective length of database: 121,419,379
effective search space: 162459129102
effective search space used: 162459129102
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)