BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041230
(485 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 98/186 (52%), Gaps = 19/186 (10%)
Query: 182 INNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGARSFKS 240
+ S ++L A++ FS+ N++G G FG VY G L DGT +AVK R GG F++
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 241 ECKAAINIRHRNIVRV----FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWR 296
E + HRN++R+ T + +VY +M NGS+ L + ++
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTE---------RLLVYPYMANGSVASCLRERPESQPP 135
Query: 297 LLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
L D+ K+ IA+ AR L YLH C P+I H ++K +N+LLD+E VGDF +A+
Sbjct: 136 L---DW--PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 190
Query: 357 FLPDTD 362
+ D
Sbjct: 191 LMDYKD 196
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 7/134 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFID--VMGTIGYVAPEYGMGSEVSSYG 58
H D+K +N+ LD+E A +GDFG+A+ + + + V GTIG++APEY + S
Sbjct: 165 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKT 224
Query: 59 DVYSFGILLLEMFTGLRPNNGMF---KDDLNLPNLVKSALPARA-EQILDVAFFQEIEEE 114
DV+ +G++LLE+ TG R + DD+ L + VK L + E ++DV ++E
Sbjct: 225 DVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDE 284
Query: 115 ET-LYKKASSTCTQ 127
E + + CTQ
Sbjct: 285 EVEQLIQVALLCTQ 298
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 96/186 (51%), Gaps = 19/186 (10%)
Query: 182 INNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGARSFKS 240
+ S ++L A++ F + N++G G FG VY G L DG +AVK R GG F++
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 241 ECKAAINIRHRNIVRV----FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWR 296
E + HRN++R+ T + +VY +M NGS+ L + ++
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTE---------RLLVYPYMANGSVASCLRERPESQPP 127
Query: 297 LLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
L D+ K+ IA+ AR L YLH C P+I H ++K +N+LLD+E VGDF +A+
Sbjct: 128 L---DW--PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182
Query: 357 FLPDTD 362
+ D
Sbjct: 183 LMDYKD 188
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFID--VMGTIGYVAPEYGMGSEVSSYG 58
H D+K +N+ LD+E A +GDFG+A+ + + + V G IG++APEY + S
Sbjct: 157 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKT 216
Query: 59 DVYSFGILLLEMFTGLRPNNGMF---KDDLNLPNLVKSALPARA-EQILDVAFFQEIEEE 114
DV+ +G++LLE+ TG R + DD+ L + VK L + E ++DV ++E
Sbjct: 217 DVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDE 276
Query: 115 ET-LYKKASSTCTQ 127
E + + CTQ
Sbjct: 277 EVEQLIQVALLCTQ 290
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 189 DLYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINI 248
DL +ATN F LIG G FG VY G L DG +A+K G F++E +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAV-VYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKK 307
RH ++ VS + + R + + +YK+M NG+L+ L+G D L +++
Sbjct: 93 RHPHL------VSLIGFCDERNEMILIYKYMENGNLKRHLYGSD-----LPTMSMSWEQR 141
Query: 308 LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRF 367
L+I I AR L YLH I H ++K N+LLD+ + + DF +++ + D QT
Sbjct: 142 LEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELD-QTHL 197
Query: 368 -------IGKLNVRNFVKMALSQR 384
+G ++ F+K L+++
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEK 221
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF---LPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+K N+ LD+ + DFGI++ L V GT+GY+ PEY + ++
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEK 221
Query: 58 GDVYSFGILLLEMFTGLRP-NNGMFKDDLNLPNL-VKSALPARAEQILDVAFFQEIEEE 114
DVYSFG++L E+ + ++ +NL V+S + EQI+D +I E
Sbjct: 222 SDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPE 280
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 15/169 (8%)
Query: 189 DLYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINI 248
DL +ATN F LIG G FG VY G L DG +A+K G F++E +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAV-VYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKK 307
RH ++ VS + + R + + +YK+M NG+L+ L+G D L +++
Sbjct: 93 RHPHL------VSLIGFCDERNEMILIYKYMENGNLKRHLYGSD-----LPTMSMSWEQR 141
Query: 308 LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
L+I I AR L YLH I H ++K N+LLD+ + + DF +++
Sbjct: 142 LEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK 187
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF---LPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+K N+ LD+ + DFGI++ L V GT+GY+ PEY + ++
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEK 221
Query: 58 GDVYSFGILLLEMFTGLRP-NNGMFKDDLNLPNL-VKSALPARAEQILDVAFFQEIEEE 114
DVYSFG++L E+ + ++ +NL V+S + EQI+D +I E
Sbjct: 222 SDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPE 280
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 73 SEEPI------XIVTEYMSKGSLLDFLKGETGKYLRLPQL-------VDMAAQIASGMAY 119
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 120 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK 170
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL+ +N+ + + + + DFG+AR + T+ I + APE + +
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGM 209
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 27/169 (15%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+ +F
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF--- 85
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Y A A+V ++ SL LH + F +KK +DIA AR + Y
Sbjct: 86 --MGYSTAPQLAIVTQWCEGSSLYHHLHASETK--------FEMKKLIDIARQTARGMDY 135
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
LH I H +LK +N+ L ++ +GDF +A E++R+ G
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLA------TEKSRWSG 175
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL ++ T +GDFG+A F + G+I ++APE + + Y
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 58 ---GDVYSFGILLLEMFTGLRPNNGMFKDDLNL---------PNL--VKSALPARAEQIL 103
DVY+FGI+L E+ TG P + + D + P+L V+S P R ++++
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 262
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 76 SEEPIY------IVTEYMSKGSLLDFLKGETGKYLRLPQL-------VDMAAQIASGMAY 122
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 123 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 173
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 189 SDVWSFGILLTELTTKGRVPYPGM 212
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ +D T + DFGIA+ L ETS V+GT+ Y +PE G
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 58 GDVYSFGILLLEMFTGLRPNNG 79
D+YS GI+L EM G P NG
Sbjct: 193 TDIYSIGIVLYEMLVGEPPFNG 214
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 35/170 (20%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFN---LIRP----GGARSFKSECKAAINIRHRNIVR 255
+G G +VY L + T + +KV I P + F+ E + + H+NIV
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID-- 313
+ VD + + +V +++ +L E++ ++H L +D AI+
Sbjct: 76 MI----DVDEEDDCY-YLVMEYIEGPTLSEYI----ESHGPL---------SVDTAINFT 117
Query: 314 --VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
+ +K+ H RI H ++KP N+L+D + DF +A+ L +T
Sbjct: 118 NQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + IRH +V+++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 83 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQL-------VDMAAQIASGMAY 129
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGM 219
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 183 NNLSFKDLYDATNGFS------SANLIGAGNFGSVYNGTLFDGTTIAVK----VFNLIRP 232
++ SF +L + TN F N +G G FG VY G + + TT+AVK + ++
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 71
Query: 233 GGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDD 292
+ F E K +H N+V + G G +VY +MPNGSL + L D
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRLSCLDG 126
Query: 293 T---HWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
T W + + IA A + +LH + H ++K +N+LLD+ +
Sbjct: 127 TPPLSWHM---------RCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKI 174
Query: 350 GDFSMAR 356
DF +AR
Sbjct: 175 SDFGLAR 181
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF---LPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+K +N+ LD+ TA + DFG+AR ++GT Y+APE + E++
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPK 214
Query: 58 GDVYSFGILLLEMFTGL 74
D+YSFG++LLE+ TGL
Sbjct: 215 SDIYSFGVVLLEIITGL 231
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 183 NNLSFKDLYDATNGFS------SANLIGAGNFGSVYNGTLFDGTTIAVK----VFNLIRP 232
++ SF +L + TN F N +G G FG VY G + + TT+AVK + ++
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 71
Query: 233 GGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDD 292
+ F E K +H N+V + G G +VY +MPNGSL + L D
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRLSCLDG 126
Query: 293 T---HWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
T W + + IA A + +LH + H ++K +N+LLD+ +
Sbjct: 127 TPPLSWHM---------RCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKI 174
Query: 350 GDFSMAR 356
DF +AR
Sbjct: 175 SDFGLAR 181
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H D+K +N+ LD+ TA + DFG+AR + ++GT Y+APE + E++
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPK 214
Query: 58 GDVYSFGILLLEMFTGL 74
D+YSFG++LLE+ TGL
Sbjct: 215 SDIYSFGVVLLEIITGL 231
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 83 SEEPI------YIVIEYMSKGSLLDFLKGEMGKYLRLPQL-------VDMAAQIASGMAY 129
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK 180
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL+ +N+ + + + + DFG+AR + T+ I + APE + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM 219
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 183 NNLSFKDLYDATNGFS------SANLIGAGNFGSVYNGTLFDGTTIAVK----VFNLIRP 232
++ SF +L + TN F N +G G FG VY G + + TT+AVK + ++
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 65
Query: 233 GGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDD 292
+ F E K +H N+V + G G +VY +MPNGSL + L D
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRLSCLDG 120
Query: 293 T---HWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
T W + + IA A + +LH + H ++K +N+LLD+ +
Sbjct: 121 TPPLSWHM---------RCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKI 168
Query: 350 GDFSMAR 356
DF +AR
Sbjct: 169 SDFGLAR 175
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF---LPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+K +N+ LD+ TA + DFG+AR ++GT Y+APE + E++
Sbjct: 150 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPK 208
Query: 58 GDVYSFGILLLEMFTGL 74
D+YSFG++LLE+ TGL
Sbjct: 209 SDIYSFGVVLLEIITGL 225
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 249 SEEPIY------IVTEYMSKGSLLDFLKGETGKYLRLPQL-------VDMAAQIASGMAY 295
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 346
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGM 385
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 249 SEEPIY------IVTEYMSKGSLLDFLKGETGKYLRLPQL-------VDMAAQIASGMAY 295
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 346
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGM 385
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 74 SEEPIY------IVTEYMSKGSLLDFLKGEMGKYLRLPQL-------VDMAAQIASGMAY 120
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 121 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 171
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 187 SDVWSFGILLTELTTKGRVPYPGM 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 72 SEEPIY------IVTEYMSKGSLLDFLKGEMGKYLRLPQL-------VDMAAQIASGMAY 118
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 119 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 169
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 185 SDVWSFGILLTELTTKGRVPYPGM 208
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 83 SEEPI------YIVIEYMSKGSLLDFLKGEMGKYLRLPQL-------VDMAAQIASGMAY 129
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGM 219
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 27/169 (15%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+ +F
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF--- 85
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Y A+V ++ SL LH + F +KK +DIA AR + Y
Sbjct: 86 --MGYSTKPQLAIVTQWCEGSSLYHHLHASET--------KFEMKKLIDIARQTARGMDY 135
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
LH I H +LK +N+ L ++ +GDF +A E++R+ G
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLA------TEKSRWSG 175
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL ++ T +GDFG+A F + G+I ++APE + + Y
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 58 ---GDVYSFGILLLEMFTGLRPNNGMFKDDLNL---------PNL--VKSALPARAEQIL 103
DVY+FGI+L E+ TG P + + D + P+L V+S P R ++++
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 262
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 83 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQL-------VDMAAQIASGMAY 129
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGM 219
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 249 SEEPIY------IVGEYMSKGSLLDFLKGETGKYLRLPQL-------VDMAAQIASGMAY 295
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 346
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGM 385
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 83 SEEPI------YIVCEYMSKGSLLDFLKGEMGKYLRLPQL-------VDMAAQIASGMAY 129
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGM 219
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 332 SEEPIY------IVTEYMSKGSLLDFLKGETGKYLRLPQL-------VDMAAQIASGMAY 378
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 379 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 429
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 445 SDVWSFGILLTELTTKGRVPYPGM 468
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D++ +A + Y
Sbjct: 80 SEEPI------YIVTEYMNKGSLLDFLKGETGKYLRLPQL-------VDMSAQIASGMAY 126
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK 177
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIE-DNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGM 216
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D++ +A + Y
Sbjct: 80 SEEPI------YIVTEYMNKGSLLDFLKGETGKYLRLPQL-------VDMSAQIASGMAY 126
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 177
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGM 216
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+ +F
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF--- 73
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Y A+V ++ SL LH + F +KK +DIA AR + Y
Sbjct: 74 --MGYSTKPQLAIVTQWCEGSSLYHHLHASET--------KFEMKKLIDIARQTARGMDY 123
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
LH I H +LK +N+ L ++ +GDF +A
Sbjct: 124 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLA 155
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF---LPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL ++ T +GDFG+A F + G+I ++APE + + Y
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 58 ---GDVYSFGILLLEMFTGLRPNNGMFKDDLNL---------PNL--VKSALPARAEQIL 103
DVY+FGI+L E+ TG P + + D + P+L V+S P R ++++
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 250
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 83 SEEPIY------IVTEYMSKGSLLDFLKGEMGKYLRLPQL-------VDMAAQIASGMAY 129
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 130 VE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGM 219
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M G L ++L G+ + RL +D+A +A + Y
Sbjct: 83 SEEPI------YIVMEYMSKGCLLDFLKGEMGKYLRLPQL-------VDMAAQIASGMAY 129
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGM 219
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M G L ++L G+ + RL +D+A +A + Y
Sbjct: 83 SEEPI------YIVTEYMSKGCLLDFLKGEMGKYLRLPQL-------VDMAAQIASGMAY 129
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF +AR + D + R K ++
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+AR + + + G I + APE + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGM 219
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG +F E + +RH +V+++ V
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L G+ + RL +D+A +A + Y
Sbjct: 250 S------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-------VDMAAQIASGMAY 296
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + ++ V DF + R + D + R K ++
Sbjct: 297 VE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIK 347
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + + DFG+ R + + + G I + APE + +
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 363 SDVWSFGILLTELTTKGRVPYPGM 386
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF---- 69
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Y A A+V ++ SL LH ++ F + K +DIA A+ + Y
Sbjct: 70 --MGYSTAPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 119
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
LH I H +LK +N+ L +++ +GDF +A
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF---LPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL +++T +GDFG+A F + G+I ++APE + + Y
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 58 ---GDVYSFGILLLEMFTGLRP 76
DVY+FGI+L E+ TG P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 27/169 (15%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+ +F
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG- 99
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
Y A+V ++ SL LH ++ F + K +DIA A+ + Y
Sbjct: 100 ----YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 147
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
LH I H +LK +N+ L +++ +GDF +A E++R+ G
Sbjct: 148 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA------TEKSRWSG 187
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL +++T +GDFG+A F + G+I ++APE + + Y
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 58 ---GDVYSFGILLLEMFTGLRP 76
DVY+FGI+L E+ TG P
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLP 236
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G + T +AVK ++PG ++F E ++H +VR++ V
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKT---LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 261 SGVD--YQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARAL 318
+ + Y ++ +FM GSL ++L K D ++L + K +D + +A +
Sbjct: 77 TKEEPIY-------IITEFMAKGSLLDFL--KSDEGGKVL-----LPKLIDFSAQIAEGM 122
Query: 319 KYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
Y+ + H +L+ +NVL+ + ++ + DF +AR + D + R K ++
Sbjct: 123 AYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK 175
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +NV + + + + DFG+AR + + + G I + APE +
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+V+SFGILL E+ T G P G D+
Sbjct: 191 SNVWSFGILLYEIVTYGKIPYPGRTNADV 219
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 27/169 (15%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+ +F
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG- 91
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
Y A+V ++ SL LH ++ F + K +DIA A+ + Y
Sbjct: 92 ----YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 139
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
LH I H +LK +N+ L +++ +GDF +A E++R+ G
Sbjct: 140 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA------TEKSRWSG 179
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL +++T +GDFG+A F + G+I ++APE + + Y
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 58 ---GDVYSFGILLLEMFTGLRP 76
DVY+FGI+L E+ TG P
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLP 228
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSY 57
H D+K +N+ LD+ TA + DFG+AR + ++GT Y APE + E++
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPK 205
Query: 58 GDVYSFGILLLEMFTGL 74
D+YSFG++LLE+ TGL
Sbjct: 206 SDIYSFGVVLLEIITGL 222
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 31/187 (16%)
Query: 183 NNLSFKDLYDATNGFS------SANLIGAGNFGSVYNGTLFDGTTIAVK----VFNLIRP 232
++ SF +L + TN F N G G FG VY G + + TT+AVK + ++
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 62
Query: 233 GGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDD 292
+ F E K +H N+V + G G +VY + PNGSL + L D
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELL----GFSSDGDDL-CLVYVYXPNGSLLDRLSCLDG 117
Query: 293 T---HWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
T W + IA A + +LH + H ++K +N+LLD+ +
Sbjct: 118 TPPLSWH---------XRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKI 165
Query: 350 GDFSMAR 356
DF +AR
Sbjct: 166 SDFGLAR 172
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 27/169 (15%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF---- 69
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Y A+V ++ SL LH ++ F + K +DIA A+ + Y
Sbjct: 70 --MGYSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 119
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
LH I H +LK +N+ L +++ +GDF +A E++R+ G
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA------TEKSRWSG 159
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL +++T +GDFG+A F + G+I ++APE + + Y
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 58 ---GDVYSFGILLLEMFTGLRP 76
DVY+FGI+L E+ TG P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+ +F
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG- 99
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
Y A+V ++ SL LH ++ F + K +DIA A+ + Y
Sbjct: 100 ----YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 147
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
LH I H +LK +N+ L +++ +GDF +A
Sbjct: 148 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF---LPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL +++T +GDFG+A F + G+I ++APE + + Y
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 58 ---GDVYSFGILLLEMFTGLRP 76
DVY+FGI+L E+ TG P
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLP 236
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 21/160 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKV-----FNLIRPGGARSFKSECKAAINIRHRNIVRVF 257
IGAG+FG+V+ + G+ +AVK+ F+ R F E +RH NIV
Sbjct: 45 IGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAER---VNEFLREVAIMKRLRHPNIVLFM 100
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
AV+ Q ++V +++ GSL LH K +L +++L +A DVA+
Sbjct: 101 GAVT----QPPNL-SIVTEYLSRGSLYRLLH-KSGAREQLDE-----RRRLSMAYDVAKG 149
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARF 357
+ YLH + P I H NLK N+L+D + V DF ++R
Sbjct: 150 MNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSY 57
H +LK N+ +D + T + DFG++R ++F+ GT ++APE +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 58 GDVYSFGILLLEMFTGLRP 76
DVYSFG++L E+ T +P
Sbjct: 220 SDVYSFGVILWELATLQQP 238
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+ +F
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG- 98
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
Y A+V ++ SL LH ++ F + K +DIA A+ + Y
Sbjct: 99 ----YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 146
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
LH I H +LK +N+ L +++ +GDF +A
Sbjct: 147 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 178
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF---LPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL +++T +GDFG+A F + G+I ++APE + + Y
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 58 ---GDVYSFGILLLEMFTGLRP 76
DVY+FGI+L E+ TG P
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLP 235
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF---- 74
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Y A+V ++ SL LH ++ F + K +DIA A+ + Y
Sbjct: 75 --MGYSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 124
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
LH I H +LK +N+ L +++ +GDF +A
Sbjct: 125 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF---LPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL +++T +GDFG+A F + G+I ++APE + + Y
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 58 ---GDVYSFGILLLEMFTGLRP 76
DVY+FGI+L E+ TG P
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF---- 71
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Y A+V ++ SL LH ++ F + K +DIA A+ + Y
Sbjct: 72 --MGYSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 121
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
LH I H +LK +N+ L +++ +GDF +A
Sbjct: 122 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 153
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF---LPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL +++T +GDFG+A F + G+I ++APE + + Y
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 58 ---GDVYSFGILLLEMFTGLRP 76
DVY+FGI+L E+ TG P
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLP 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF---- 74
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Y A+V ++ SL LH ++ F + K +DIA A+ + Y
Sbjct: 75 --MGYSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 124
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
LH I H +LK +N+ L +++ +GDF +A
Sbjct: 125 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF---LPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL +++T +GDFG+A F + G+I ++APE + + Y
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 58 ---GDVYSFGILLLEMFTGLRP 76
DVY+FGI+L E+ TG P
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ N+ P ++FK+E RH NI+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF---- 69
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Y A+V ++ SL LH ++ F + K +DIA A+ + Y
Sbjct: 70 --MGYSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 119
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
LH I H +LK +N+ L +++ +GDF +A
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF---LPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLK +N+FL +++T +GDFG+A F + G+I ++APE + + Y
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 58 ---GDVYSFGILLLEMFTGLRP 76
DVY+FGI+L E+ TG P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-MGTIGYVAPEYGMGSEVSSYGD 59
H DLKP+NVFLD + LGDFG+AR L +TSF +GT Y++PE + D
Sbjct: 139 HRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSD 198
Query: 60 VYSFGILLLEMFTGLRPNNGMFKDDL 85
++S G LL E+ + P + +L
Sbjct: 199 IWSLGCLLYELCALMPPFTAFSQKEL 224
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
SE ++H NIVR + + +D +V ++ G L + K + L+
Sbjct: 54 SEVNLLRELKHPNIVRYYDRI--IDRTNTTL-YIVMEYCEGGDLASVI-TKGTKERQYLD 109
Query: 300 FDFLIKKKLDIAIDVARALKYLH--CDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARF 357
+F+++ + + ALK H D + H +LKP+NV LD + +GDF +AR
Sbjct: 110 EEFVLR----VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 358 L-PDTDEQTRFIG 369
L DT F+G
Sbjct: 166 LNHDTSFAKTFVG 178
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-MGTIGYVAPEYGMGSEVSSYGD 59
H DLKP+NVFLD + LGDFG+AR L +TSF +GT Y++PE + D
Sbjct: 139 HRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSD 198
Query: 60 VYSFGILLLEMFTGLRPNNGMFKDDL 85
++S G LL E+ + P + +L
Sbjct: 199 IWSLGCLLYELCALMPPFTAFSQKEL 224
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
SE ++H NIVR + + +D +V ++ G L + K + L+
Sbjct: 54 SEVNLLRELKHPNIVRYYDRI--IDRTNTTL-YIVMEYCEGGDLASVI-TKGTKERQYLD 109
Query: 300 FDFLIKKKLDIAIDVARALKYLH--CDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARF 357
+F+++ + + ALK H D + H +LKP+NV LD + +GDF +AR
Sbjct: 110 EEFVLR----VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 358 L-PDTDEQTRFIG 369
L DT F+G
Sbjct: 166 LNHDTSFAKAFVG 178
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V+ GT T +A+K ++PG SF E + ++H +V+++ V
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKT---LKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
S +V ++M GSL ++L + +L N +D+A VA + Y
Sbjct: 74 S------EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNL-------VDMAAQVAAGMAY 120
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ + +I + DF +AR + D + R K ++
Sbjct: 121 IE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK 171
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL+ +N+ + + + + DFG+AR + T+ I + APE + +
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGM 210
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-- 58
H D+KP N+ LD+ H+ DF IA LP ET + GT Y+APE + + Y
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFA 197
Query: 59 -DVYSFGILLLEMFTGLRP 76
D +S G+ E+ G RP
Sbjct: 198 VDWWSLGVTAYELLRGRRP 216
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 174 PVYEEKQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVFN---L 229
PV++E + +N + F IG G+FG V D + A+K N
Sbjct: 4 PVFDENEDVN----------FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC 53
Query: 230 IRPGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG 289
+ R+ E + + H +V ++ + +Q +V + G L H
Sbjct: 54 VERNEVRNVFKELQIMQGLEHPFLVNLWYS-----FQDEEDMFMVVDLLLGGDLR--YHL 106
Query: 290 KDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
+ + H++ I ++ AL YL RI H ++KP N+LLD+ H+
Sbjct: 107 QQNVHFKEETVKLFI-------CELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHI 156
Query: 350 GDFSMARFLPDTDEQTRFIG 369
DF++A LP + T G
Sbjct: 157 TDFNIAAMLPRETQITTMAG 176
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 74 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 120
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H NL+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 121 IE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 171
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H +L+ +N+ + D ++ + DFG+AR + + + G I + APE +
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGM 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 20/174 (11%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G + T +AVK ++PG ++F E ++H +VR++ V
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKT---LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ + ++ ++M GSL ++L + L+ K +D + +A + Y
Sbjct: 78 TREEP-----IYIITEYMAKGSLLDFLKSDEGGK-------VLLPKLIDFSAQIAEGMAY 125
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +NVL+ + ++ + DF +AR + D + R K ++
Sbjct: 126 IE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK 176
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +NV + + + + DFG+AR + + + G I + APE +
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+SFGILL E+ T G P G D+
Sbjct: 192 SDVWSFGILLYEIVTYGKIPYPGRTNADV 220
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 27/188 (14%)
Query: 181 TINNLSFKDLYDATN---GFSSANL---IGAGNFGSVYNGTLFDGTTIAVKV-----FNL 229
T NL F+ D + + N+ IGAG+FG+V+ + G+ +AVK+ F+
Sbjct: 17 TTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAE-WHGSDVAVKILMEQDFHA 75
Query: 230 IRPGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG 289
R F E +RH NIV AV+ Q ++V +++ GSL LH
Sbjct: 76 ER---VNEFLREVAIMKRLRHPNIVLFMGAVT----QPPNL-SIVTEYLSRGSLYRLLH- 126
Query: 290 KDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
K +L +++L +A DVA+ + YLH + P I H +LK N+L+D + V
Sbjct: 127 KSGAREQLDE-----RRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKV 180
Query: 350 GDFSMARF 357
DF ++R
Sbjct: 181 CDFGLSRL 188
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSY 57
H DLK N+ +D + T + DFG++R + F+ GT ++APE +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 58 GDVYSFGILLLEMFTGLRP 76
DVYSFG++L E+ T +P
Sbjct: 220 SDVYSFGVILWELATLQQP 238
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSG 262
IG G FG V G + G +AVK A++F +E +RH N+V++ +
Sbjct: 14 IGKGEFGDVMLGD-YRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI-- 68
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLH 322
V+ +G + +V ++M GSL ++L + + +L D L+K ++DV A++YL
Sbjct: 69 VEEKGGLY--IVTEYMAKGSLVDYLRSRGRS---VLGGDCLLK----FSLDVCEAMEYLE 119
Query: 323 CDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVRNFVKMALS 382
+ H +L NVL+ ++ + V DF + + T + GKL V+ AL
Sbjct: 120 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----TGKLPVKWTAPEALR 172
Query: 383 QR 384
++
Sbjct: 173 EK 174
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H DL NV + ++ A + DFG+ + E S G + + APE + S+
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 59 DVYSFGILLLEMFT 72
DV+SFGILL E+++
Sbjct: 181 DVWSFGILLWEIYS 194
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSG 262
IG G FG V G + G +AVK A++F +E +RH N+V++ +
Sbjct: 201 IGKGEFGDVMLGD-YRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI-- 255
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLH 322
V+ +G + +V ++M GSL ++L + + +L D L+K ++DV A++YL
Sbjct: 256 VEEKGGLY--IVTEYMAKGSLVDYLRSRGRS---VLGGDCLLK----FSLDVCEAMEYLE 306
Query: 323 CDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVRNFVKMALS 382
+ H +L NVL+ ++ + V DF + + T + GKL V+ AL
Sbjct: 307 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----TGKLPVKWTAPEALR 359
Query: 383 QR 384
++
Sbjct: 360 EK 361
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H DL NV + ++ A + DFG+ + E S G + + APE + S+
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 59 DVYSFGILLLEMFT 72
DV+SFGILL E+++
Sbjct: 368 DVWSFGILLWEIYS 381
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSG 262
IG G FG V G + G +AVK A++F +E +RH N+V++ +
Sbjct: 29 IGKGEFGDVMLGD-YRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI-- 83
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLH 322
V+ +G + +V ++M GSL ++L + + +L D L+K ++DV A++YL
Sbjct: 84 VEEKGGLY--IVTEYMAKGSLVDYLRSRGRS---VLGGDCLLK----FSLDVCEAMEYLE 134
Query: 323 CDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVRNFVKMALS 382
+ H +L NVL+ ++ + V DF + + T + GKL V+ AL
Sbjct: 135 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----TGKLPVKWTAPEALR 187
Query: 383 QR 384
++
Sbjct: 188 EK 189
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H DL NV + ++ A + DFG+ + E S G + + APE + S+
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 59 DVYSFGILLLEMFT 72
DV+SFGILL E+++
Sbjct: 196 DVWSFGILLWEIYS 209
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 202 LIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVS 261
LIG G +G+VY G+L D +AVKVF+ + K+ + + + H NI R
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPL-MEHDNIARFIVGDE 77
Query: 262 GVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYL 321
V G +V ++ PNGSL ++L L D++ +L A V R L YL
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLS--------LHTSDWVSSCRL--AHSVTRGLAYL 127
Query: 322 HCDC------QPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
H + +P I+H +L NVL+ ++ + DF ++
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL-------PVE--TSFIDVMGTIGYVAPEYGMG 51
H DL NV + ++ T + DFG++ L P E + I +GTI Y+APE G
Sbjct: 143 HRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG 202
Query: 52 S-------EVSSYGDVYSFGILLLEMF 71
+ D+Y+ G++ E+F
Sbjct: 203 AVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE----TSFIDVMGTIGYVAPEYGMGSEVSS 56
H D+KP+N+ + + DFGIAR + T V+GT Y++PE G V +
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 57 YGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQ 101
DVYS G +L E+ TG P G D + ++ + +P A
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARH 243
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 202 LIGAGNFGSVYNG-TLFDGTTIAVKVF--NLIR-PGGARSFKSECKAAINIRHRNIVRVF 257
++G G V+ L D +AVKV +L R P F+ E + A + H IV V+
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
+ +V +++ +L + +H + K+ +++ D +A
Sbjct: 79 D-TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKRAIEVIADACQA 128
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
L + H Q I H ++KP+N+++ V DF +AR + D+
Sbjct: 129 LNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 78 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 124
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 125 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 175
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL+ +N+ + D ++ + DFG+AR + T+ I + APE +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGM 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 79 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 125
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 126 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 176
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL+ +N+ + D ++ + DFG+AR + T+ I + APE +
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGM 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 120/297 (40%), Gaps = 40/297 (13%)
Query: 202 LIGAGNFGSVYNGTLFDGT-----TIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+IGAG FG VY G L + +A+K R F E H NI+R
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 256 VFTAVSGVDYQGARFKA--VVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
+ +S ++K ++ ++M NG+L+++L KD +F + + + +
Sbjct: 111 LEGVIS-------KYKPMMIITEYMENGALDKFLREKDG--------EFSVLQLVGMLRG 155
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI--GKL 371
+A +KYL H +L N+L++ ++ V DF ++R L D E T GK+
Sbjct: 156 IAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212
Query: 372 NVRNFVKMALSQRVEEILNDFNLQEIEEDRTMCMHAXXXXXXXXH-----------VSII 420
+R A+S R +D I M H +
Sbjct: 213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP 272
Query: 421 LECVNSICEIGVACSAERPRERMKLNDVESRL-RLIRKKILETSVCPEDKKKKISMP 476
++C ++I ++ + C + R K D+ S L +LIR ++ D + I +P
Sbjct: 273 MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLP 329
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + APE + +S
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTS 229
Query: 57 YGDVYSFGILLLEMFT-GLRP 76
DV+SFGI++ E+ T G RP
Sbjct: 230 ASDVWSFGIVMWEVMTYGERP 250
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 84 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 130
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 131 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 181
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL+ +N+ + D ++ + DFG+AR + T+ I + APE +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGM 220
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 80 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 126
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 127 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 177
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL+ +N+ + D ++ + DFG+AR + T+ I + APE +
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGM 216
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 78 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 124
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 125 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 175
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL+ +N+ + D ++ + DFG+AR + T+ I + APE +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGM 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 86 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 132
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 133 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 183
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL+ +N+ + D ++ + DFG+AR + T+ I + APE +
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGM 222
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 87 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 133
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 134 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 184
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL+ +N+ + D ++ + DFG+AR + T+ I + APE +
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGM 223
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 83 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 129
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 130 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 180
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + D ++ + DFG+AR + + + G I + APE +
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 196 SDVWSFGILLTEIVTHGRIPYPGM 219
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 78 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 124
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 125 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 175
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + D ++ + DFG+AR + + + G I + APE +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGM 214
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 73 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 119
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 120 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 170
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + D ++ + DFG+AR + + + G I + APE +
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGM 209
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 84 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 130
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 131 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 181
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + D ++ + DFG+AR + + + G I + APE +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGM 220
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 88 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 134
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 135 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 185
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + D ++ + DFG+AR + + + G I + APE +
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 201 SDVWSFGILLTEIVTHGRIPYPGM 224
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 21/181 (11%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSG 262
IG G FG V G + G +AVK A++F +E +RH N+V++ +
Sbjct: 20 IGKGEFGDVMLGD-YRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI-- 74
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLH 322
V+ +G + +V ++M GSL ++L + + +L D L+K ++DV A++YL
Sbjct: 75 VEEKGGLY--IVTEYMAKGSLVDYLRSRGRS---VLGGDCLLK----FSLDVCEAMEYLE 125
Query: 323 CDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVRNFVKMALS 382
+ H +L NVL+ ++ + V DF + + T + GKL V+ AL
Sbjct: 126 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----TGKLPVKWTAPEALR 178
Query: 383 Q 383
+
Sbjct: 179 E 179
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H DL NV + ++ A + DFG+ + E S G + + APE + S+
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 59 DVYSFGILLLEMFT 72
DV+SFGILL E+++
Sbjct: 187 DVWSFGILLWEIYS 200
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 21 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +F+P GSL E+L H + H +LL +
Sbjct: 80 ----KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQY----------TSQ 125
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 126 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 200 ASDVWSFGVVLYELFT 215
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI-DVMGTIGYVAPEYGMGSEVSSYGD 59
H DLKP+NVFLD + LGDFG+AR L + F + +GT Y++PE + D
Sbjct: 139 HRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSD 198
Query: 60 VYSFGILLLEMFTGLRPNNGMFKDDL 85
++S G LL E+ + P + +L
Sbjct: 199 IWSLGCLLYELCALMPPFTAFSQKEL 224
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 203 IGAGNFGSVYN-GTLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNIVRVFTA 259
IG G++G DG + K + + + SE ++H NIVR +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALK 319
+ +D +V ++ G L + K + L+ +F+++ + + ALK
Sbjct: 74 I--IDRTNTTL-YIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLR----VMTQLTLALK 125
Query: 320 YLH--CDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL-PDTDEQTRFIG 369
H D + H +LKP+NV LD + +GDF +AR L D D F+G
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVG 178
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 27/170 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 19 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 78 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 123
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDE 363
+ + ++YL R H NL N+L+++E +GDF + + LP E
Sbjct: 124 ICKGMEYLGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE 170
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H +L N+ +++E +GDFG+ + LP + + V I + APE S+ S
Sbjct: 138 HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSV 197
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 198 ASDVWSFGVVLYELFT 213
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE----TSFIDVMGTIGYVAPEYGMGSEVSS 56
H D+KP+N+ + + DFGIAR + T V+GT Y++PE G V +
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 57 YGDVYSFGILLLEMFTGLRPNNG 79
DVYS G +L E+ TG P G
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFTG 221
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 202 LIGAGNFGSVYNG-TLFDGTTIAVKVF--NLIR-PGGARSFKSECKAAINIRHRNIVRVF 257
++G G V+ L D +AVKV +L R P F+ E + A + H IV V+
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
+ +V +++ +L + +H + K+ +++ D +A
Sbjct: 79 D-TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKRAIEVIADACQA 128
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
L + H Q I H ++KP+N+++ V DF +AR + D+
Sbjct: 129 LNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE----TSFIDVMGTIGYVAPEYGMGSEVSS 56
H D+KP+N+ + + DFGIAR + T V+GT Y++PE G V +
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 57 YGDVYSFGILLLEMFTGLRPNNG 79
DVYS G +L E+ TG P G
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFTG 221
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 16/143 (11%)
Query: 222 IAVKVF--NLIR-PGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFM 278
+AVKV +L R P F+ E + A + H IV V+ + +V +++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD-TGEAETPAGPLPYIVMEYV 98
Query: 279 PNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSN 338
+L + +H + K+ +++ D +AL + H Q I H ++KP+N
Sbjct: 99 DGVTLRDIVHTEGP---------MTPKRAIEVIADACQALNFSH---QNGIIHRDVKPAN 146
Query: 339 VLLDDEMIGHVGDFSMARFLPDT 361
+++ V DF +AR + D+
Sbjct: 147 IMISATNAVKVMDFGIARAIADS 169
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE----TSFIDVMGTIGYVAPEYGMGSEVSS 56
H D+KP+N+ + + DFGIAR + T V+GT Y++PE G V +
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 57 YGDVYSFGILLLEMFTGLRPNNG 79
DVYS G +L E+ TG P G
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFTG 221
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 16/143 (11%)
Query: 222 IAVKVF--NLIR-PGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFM 278
+AVKV +L R P F+ E + A + H IV V+ A + +V +++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY-ATGEAETPAGPLPYIVMEYV 98
Query: 279 PNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSN 338
+L + +H + K+ +++ D +AL + H Q I H ++KP+N
Sbjct: 99 DGVTLRDIVHTEGP---------MTPKRAIEVIADACQALNFSH---QNGIIHRDVKPAN 146
Query: 339 VLLDDEMIGHVGDFSMARFLPDT 361
+++ V DF +AR + D+
Sbjct: 147 IMISATNAVKVMDFGIARAIADS 169
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ LDD + D G+A +P + +GT+GY+APE + D ++
Sbjct: 311 DLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 63 FGILLLEMFTGLRP 76
G LL EM G P
Sbjct: 371 LGCLLYEMIAGQSP 384
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPD 360
A ++ L+ LH + RI + +LKP N+LLDD + D +A +P+
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 21 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 80 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQY----------TSQ 125
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 126 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 200 ASDVWSFGVVLYELFT 215
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
IG+G+FG+VY G +AVK+ ++ P + +F++E RH NI+ +F
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMG- 99
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
Y A+V ++ SL + LH ++ F + + +DIA A+ + Y
Sbjct: 100 ----YMTKDNLAIVTQWCEGSSLYKHLHVQET--------KFQMFQLIDIARQTAQGMDY 147
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
LH I H ++K +N+ L + + +GDF +A
Sbjct: 148 LHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLA 179
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPE---YGMGSEV 54
H D+K +N+FL + +T +GDFG+A + V G++ ++APE +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
S DVYS+GI+L E+ TG P
Sbjct: 215 SFQSDVYSYGIVLYELMTGELP 236
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ LDD + D G+A +P + +GT+GY+APE + D ++
Sbjct: 311 DLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 63 FGILLLEMFTGLRP 76
G LL EM G P
Sbjct: 371 LGCLLYEMIAGQSP 384
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPD 360
A ++ L+ LH + RI + +LKP N+LLDD + D +A +P+
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 34/284 (11%)
Query: 200 ANLIGAGNFGSVYNGTLF--DGTTIAVKVFNLIRPGGAR----SFKSECKAAINIRHRNI 253
++G G FGSV G L DGT++ V V + ++ F SE + H N+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEW-LHGKDDTHWRLLNFDFLIKKKLDIAI 312
+R+ + QG V+ FM G L + L+ + +T + + L+K +
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLK----FMV 154
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR--FLPDTDEQTRFIGK 370
D+A ++YL H +L N +L D+M V DF +++ + D Q R I K
Sbjct: 155 DIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGR-IAK 210
Query: 371 LNVRNFVKMALSQRVEEILND---FNLQEIEEDRTMCMHAXXXXXXXXHVSIIL------ 421
+ V+ +L+ RV +D F + + E T M +L
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVT-MWEIATRGMTPYPGVQNHEMYDYLLHGHRLK 269
Query: 422 ---ECVNSICEIGVACSAERPRERMKLNDVESRLRLIRKKILET 462
+C++ + EI +C P +R S LRL +K+LE+
Sbjct: 270 QPEDCLDELYEIMYSCWRTDPLDRPTF----SVLRLQLEKLLES 309
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSF----IDVMGTIGYVAPEYGMGSEVSS 56
H DL N L D+MT + DFG+++ + + I M + ++A E +S
Sbjct: 170 HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM-PVKWIAIESLADRVYTS 228
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+ + E+ T G+ P G+
Sbjct: 229 KSDVWAFGVTMWEIATRGMTPYPGV 253
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE----TSFIDVMGTIGYVAPEYGMGSEVSS 56
H D+KP+N+ + + DFGIAR + T V+GT Y++PE G V +
Sbjct: 156 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 215
Query: 57 YGDVYSFGILLLEMFTGLRPNNG 79
DVYS G +L E+ TG P G
Sbjct: 216 RSDVYSLGCVLYEVLTGEPPFTG 238
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 16/143 (11%)
Query: 222 IAVKVF--NLIR-PGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFM 278
+AVKV +L R P F+ E + A + H IV V+ + +V +++
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD-TGEAETPAGPLPYIVMEYV 115
Query: 279 PNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSN 338
+L + +H + K+ +++ D +AL + H Q I H ++KP+N
Sbjct: 116 DGVTLRDIVHTEGP---------MTPKRAIEVIADACQALNFSH---QNGIIHRDVKPAN 163
Query: 339 VLLDDEMIGHVGDFSMARFLPDT 361
+++ V DF +AR + D+
Sbjct: 164 IMISATNAVKVMDFGIARAIADS 186
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFID----VMGTIGYVAPEYGMGSEVSS 56
H D+KP+N+ + + DFGIAR + + + V+GT Y++PE G V +
Sbjct: 139 HRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 57 YGDVYSFGILLLEMFTGLRPNNG 79
DVYS G +L E+ TG P G
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFTG 221
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 202 LIGAGNFGSVYNG-TLFDGTTIAVKVF--NLIR-PGGARSFKSECKAAINIRHRNIVRVF 257
++G G V+ L D +AVKV +L R P F+ E + A + H IV V+
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
+ +V +++ +L + +H + K+ +++ D +A
Sbjct: 79 D-TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---------MTPKRAIEVIADACQA 128
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
L + H Q I H ++KP+N+L+ V DF +AR + D+
Sbjct: 129 LNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADS 169
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRP-GGARSFKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G F +E + H N++ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 96 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 143
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+KYL + H +L N +LD++ V DF +AR + D +
Sbjct: 144 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + V G P M E
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEXXSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAP 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 116 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 163
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+KYL + H +L N +LD++ V DF +AR + D +
Sbjct: 164 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 206
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + + V G P M E
Sbjct: 175 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKF 233
Query: 55 SSYGDVYSFGILLLEMFT 72
++ DV+SFG+LL E+ T
Sbjct: 234 TTKSDVWSFGVLLWELMT 251
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 97 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 144
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+KYL + H +L N +LD++ V DF +AR + D +
Sbjct: 145 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + + V G P M E
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRP-GGARSFKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G F +E + H N++ +
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 94 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 141
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+KYL + H +L N +LD++ V DF +AR + D +
Sbjct: 142 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 184
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + + V G P M E
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKF 211
Query: 55 SSYGDVYSFGILLLEMFT 72
++ DV+SFG+LL E+ T
Sbjct: 212 TTKSDVWSFGVLLWELMT 229
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRP-GGARSFKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G F +E + H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 97 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 144
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+KYL + H +L N +LD++ V DF +AR + D +
Sbjct: 145 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + + V G P M E
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 49 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 108 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 153
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 154 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 203
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 168 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 227
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 228 ASDVWSFGVVLYELFT 243
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 197 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVR 255
F LIG+G FG V+ DG T +K R E KA + H NIV
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 256 VFTAVSGVDY-------QGARFKA----VVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLI 304
G DY +R K + +F G+LE+W+ + R D ++
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-----RGEKLDKVL 123
Query: 305 KKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
L++ + + + Y+H ++ + +LKPSN+ L D +GDF + L + ++
Sbjct: 124 A--LELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 365 TRFIGKL 371
R G L
Sbjct: 179 XRSKGTL 185
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKPSN+FL D +GDFG+ L + GT+ Y++PE + D+Y+
Sbjct: 147 DLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYA 206
Query: 63 FGILLLEMF 71
G++L E+
Sbjct: 207 LGLILAELL 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 18 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 77 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 122
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 123 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 196
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 197 ASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 17 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 76 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 121
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 122 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 171
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 136 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 195
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 196 ASDVWSFGVVLYELFT 211
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRP-GGARSFKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G F +E + H N++ +
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 115 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 162
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+KYL + H +L N +LD++ V DF +AR + D +
Sbjct: 163 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 205
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + + V G P M E
Sbjct: 174 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKF 232
Query: 55 SSYGDVYSFGILLLEMFT 72
++ DV+SFG+LL E+ T
Sbjct: 233 TTKSDVWSFGVLLWELMT 250
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 21 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 80 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 125
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 126 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 200 ASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 18 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 77 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 122
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 123 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 196
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 197 ASDVWSFGVVLYELFT 212
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 95 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 142
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+KYL + H +L N +LD++ V DF +AR + D +
Sbjct: 143 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 185
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + + V G P M E
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 89 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 136
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+KYL + H +L N +LD++ V DF +AR + D +
Sbjct: 137 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 179
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + + V G P M E
Sbjct: 148 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKF 206
Query: 55 SSYGDVYSFGILLLEMFT 72
++ DV+SFG+LL E+ T
Sbjct: 207 TTKSDVWSFGVLLWELMT 224
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 22 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 81 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 126
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 127 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 176
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 141 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 200
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 201 ASDVWSFGVVLYELFT 216
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNIVRVFTAV 260
+GAG G V+ G T +AVK ++ G +F +E ++H+ +VR++ V
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ Q + ++ ++M NGSL ++L I K LD+A +A + +
Sbjct: 78 T----QEPIY--IITEYMENGSLVDFLKTPS-------GIKLTINKLLDMAAQIAEGMAF 124
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ + H +L+ +N+L+ D + + DF +AR + D + R K ++
Sbjct: 125 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK 175
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL--PVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL+ +N+ + D ++ + DFG+AR + T+ I + APE +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL E+ T G P GM
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGM 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 16 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 75 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 120
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 121 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 170
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 135 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 194
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 195 ASDVWSFGVVLYELFT 210
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--ARSFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ T T +AVK ++PG +F +E ++H +V++ V
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKT---MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ ++ +FM GSL ++L + + L K +D + +A + +
Sbjct: 80 TKEPIY------IITEFMAKGSLLDFLKSDEGSKQPL-------PKLIDFSAQIAEGMAF 126
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ Q H +L+ +N+L+ ++ + DF +AR + D + R K ++
Sbjct: 127 IE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 177
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + DFG+AR + + + G I + APE +
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL+E+ T G P GM
Sbjct: 193 SDVWSFGILLMEIVTYGRIPYPGM 216
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 92 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 139
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+KYL + H +L N +LD++ V DF +AR + D +
Sbjct: 140 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + + V G P M E
Sbjct: 151 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKF 209
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 210 TTKSDVWSFGVLLWELMTRGAP 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 96 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 143
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+KYL + H +L N +LD++ V DF +AR + D +
Sbjct: 144 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + + V G P M E
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAP 235
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 24 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 83 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 128
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 129 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 178
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 143 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 202
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 203 ASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 23 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 82 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 127
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 128 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 177
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 142 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 201
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 202 ASDVWSFGVVLYELFT 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 36 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 95 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 140
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 141 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 214
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 215 ASDVWSFGVVLYELFT 230
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 79/200 (39%), Gaps = 39/200 (19%)
Query: 197 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVR 255
F LIG+G FG V+ DG T ++ R E KA + H NIV
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVH 69
Query: 256 VFTAVSGVDY--------------------QGARFKA----VVYKFMPNGSLEEWLHGKD 291
G DY +R K + +F G+LE+W+ +
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR- 128
Query: 292 DTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGD 351
R D ++ L++ + + + Y+H ++ H +LKPSN+ L D +GD
Sbjct: 129 ----RGEKLDKVLA--LELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 352 FSMARFLPDTDEQTRFIGKL 371
F + L + ++TR G L
Sbjct: 180 FGLVTSLKNDGKRTRSKGTL 199
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+FL D +GDFG+ L + GT+ Y++PE + D+
Sbjct: 159 HRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDL 218
Query: 61 YSFGILLLEMF 71
Y+ G++L E+
Sbjct: 219 YALGLILAELL 229
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 36 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 95 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 140
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 141 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 214
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 215 ASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 25 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 84 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 129
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ + ++YL R H +L N+L+++E +GDF + + LP E +
Sbjct: 130 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 179
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + V I + APE S+ S
Sbjct: 144 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 203
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 204 ASDVWSFGVVLYELFT 219
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR-FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLKP N+ LD+E L DFG+++ + E GT+ Y+APE + D +
Sbjct: 152 DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWW 211
Query: 62 SFGILLLEMFTGLRPNNG---------MFKDDLNLPNLVKSALPARAEQILDVAF 107
SFG+L+ EM TG P G + K L +P L A+ +L + F
Sbjct: 212 SFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----LSPEAQSLLRMLF 262
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 7/46 (15%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVG--DFSMAR 356
++A AL +LH I + +LKP N+LLD+E GH+ DF +++
Sbjct: 135 ELALALDHLHSLG---IIYRDLKPENILLDEE--GHIKLTDFGLSK 175
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR-FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLKP N+ LD+E L DFG+++ + E GT+ Y+APE + D +
Sbjct: 151 DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWW 210
Query: 62 SFGILLLEMFTGLRPNNG---------MFKDDLNLPNLVKSALPARAEQILDVAF 107
SFG+L+ EM TG P G + K L +P L A+ +L + F
Sbjct: 211 SFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----LSPEAQSLLRMLF 261
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 7/46 (15%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVG--DFSMAR 356
++A AL +LH I + +LKP N+LLD+E GH+ DF +++
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEE--GHIKLTDFGLSK 174
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 27/170 (15%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK R F+ E + +++H NIV+
Sbjct: 18 LGKGNFGSVEMCRYD-PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 257 FTAVSGVDYQ-GARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAID 313
GV Y G R ++ +++P GSL ++L H + H +LL +
Sbjct: 77 ----KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY----------TSQ 122
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDE 363
+ + ++YL R H +L N+L+++E +GDF + + LP E
Sbjct: 123 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL N+ +++E +GDFG+ + LP + F V I + APE S+ S
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSV 196
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 197 ASDVWSFGVVLYELFT 212
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G FG V+ G + +A+K IR G F E + + + H +V+++
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLY--- 66
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
GV + A +V++FM +G L ++L + F + L + +DV + Y
Sbjct: 67 -GVCLEQAPI-CLVFEFMEHGCLSDYLRTQRGL--------FAAETLLGMCLDVCEGMAY 116
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
L C + H +L N L+ + + V DF M RF+ D D+ T G
Sbjct: 117 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTG 161
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N + + + DFG+ RF+ ++ + GT + + +PE S SS
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 58 GDVYSFGILLLEMFT 72
DV+SFG+L+ E+F+
Sbjct: 183 SDVWSFGVLMWEVFS 197
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR-FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLKP N+ LD+E L DFG+++ + E GT+ Y+APE + D +
Sbjct: 151 DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWW 210
Query: 62 SFGILLLEMFTGLRPNNG---------MFKDDLNLPNLVKSALPARAEQILDVAF 107
SFG+L+ EM TG P G + K L +P L A+ +L + F
Sbjct: 211 SFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----LSPEAQSLLRMLF 261
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 7/46 (15%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVG--DFSMAR 356
++A AL +LH I + +LKP N+LLD+E GH+ DF +++
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEE--GHIKLTDFGLSK 174
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--ARSFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ T T +AVK ++PG +F +E ++H +V++ V
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKT---MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ ++ +FM GSL ++L + + L K +D + +A + +
Sbjct: 253 TKEPIY------IITEFMAKGSLLDFLKSDEGSKQPL-------PKLIDFSAQIAEGMAF 299
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
+ Q H +L+ +N+L+ ++ + DF +AR + D + R K ++
Sbjct: 300 IE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL+ +N+ + + + DFG+AR + + + G I + APE +
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFGILL+E+ T G P GM
Sbjct: 366 SDVWSFGILLMEIVTYGRIPYPGM 389
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G FG V+ G + +A+K IR G F E + + + H +V+++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLY--- 68
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
GV + A +V++FM +G L ++L + F + L + +DV + Y
Sbjct: 69 -GVCLEQAPI-CLVFEFMEHGCLSDYLRTQRGL--------FAAETLLGMCLDVCEGMAY 118
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
L C + H +L N L+ + + V DF M RF+ D D+ T G
Sbjct: 119 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTG 163
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N + + + DFG+ RF+ ++ + GT + + +PE S SS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 58 GDVYSFGILLLEMFT 72
DV+SFG+L+ E+F+
Sbjct: 185 SDVWSFGVLMWEVFS 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G FG V+ G + +A+K IR G F E + + + H +V+++
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLY--- 71
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
GV + A +V++FM +G L ++L + F + L + +DV + Y
Sbjct: 72 -GVCLEQAPI-CLVFEFMEHGCLSDYLRTQRGL--------FAAETLLGMCLDVCEGMAY 121
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
L C + H +L N L+ + + V DF M RF+ D D+ T G
Sbjct: 122 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTG 166
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N + + + DFG+ RF+ ++ + GT + + +PE S SS
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 58 GDVYSFGILLLEMFT 72
DV+SFG+L+ E+F+
Sbjct: 188 SDVWSFGVLMWEVFS 202
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGS-EVSSY 57
H DLKP N+ ++ + L DFG+AR +PV + +V+ T+ Y AP+ MGS + S+
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTS 200
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDLNLP---NLVKSALPARAEQILDVAFFQE 110
D++S G + EM TG +P DD LP +++ + P Q+ ++ +++
Sbjct: 201 VDIWSIGCIFAEMITG-KPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 28/178 (15%)
Query: 184 NLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRP--GGARSFKSE 241
NL F+ L + + +G G +G VY G +A+K L G + E
Sbjct: 13 NLYFQGLMEK---YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE 69
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNG---SLEEWLHGKDDTHWRLL 298
+ H NIV + + R +V++FM L+E G D+ ++
Sbjct: 70 ISLLKELHHPNIVSLIDVI-----HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIY 124
Query: 299 NFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ L R + + H Q RI H +LKP N+L++ + + DF +AR
Sbjct: 125 LYQLL------------RGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGS-EVSSY 57
H DLKP N+ ++ + L DFG+AR +PV + +V+ T+ Y AP+ MGS + S+
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTS 200
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDLNLP---NLVKSALPARAEQILDVAFFQE 110
D++S G + EM TG +P DD LP +++ + P Q+ ++ +++
Sbjct: 201 VDIWSIGCIFAEMITG-KPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 28/178 (15%)
Query: 184 NLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRP--GGARSFKSE 241
NL F+ L + + +G G +G VY G +A+K L G + E
Sbjct: 13 NLYFQGLMEK---YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE 69
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNG---SLEEWLHGKDDTHWRLL 298
+ H NIV + + R +V++FM L+E G D+ ++
Sbjct: 70 ISLLKELHHPNIVSLIDVI-----HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIY 124
Query: 299 NFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ L R + + H Q RI H +LKP N+L++ + + DF +AR
Sbjct: 125 LYQLL------------RGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR-FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLKP N+ LD+E L DFG+++ + E GT+ Y+APE S D +
Sbjct: 155 DLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWW 214
Query: 62 SFGILLLEMFTGLRPNNG---------MFKDDLNLPNLVKSALPARAEQILDVAF 107
S+G+L+ EM TG P G + K L +P L A+ +L F
Sbjct: 215 SYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF----LSTEAQSLLRALF 265
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRP-GGARSFKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G F +E + H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 98 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 145
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+K+L + H +L N +LD++ V DF +AR + D +
Sbjct: 146 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 188
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + F V G P M E
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAP 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 156 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 203
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+K+L + H +L N +LD++ V DF +AR + D +
Sbjct: 204 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + F V G P M E
Sbjct: 215 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKF 273
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 274 TTKSDVWSFGVLLWELMTRGAP 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 95 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 142
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+K+L + H +L N +LD++ V DF +AR + D +
Sbjct: 143 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 185
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + F V G P M E
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAP 234
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 102 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 149
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+K+L + H +L N +LD++ V DF +AR + D +
Sbjct: 150 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 192
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + F V G P M E
Sbjct: 161 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKF 219
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 220 TTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 98 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 145
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+K+L + H +L N +LD++ V DF +AR + D +
Sbjct: 146 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKE 188
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + ++ F V G P M E
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDM-LDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRP-GGARSFKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G F +E + H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 97 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 144
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+K+L + H +L N +LD++ V DF +AR + D +
Sbjct: 145 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + F V G P M E
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEY---GMGSEVSSY 57
H DLKP N+ LDD M L DFG + L ++ GT GY+APE M Y
Sbjct: 223 HRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGY 282
Query: 58 G---DVYSFGILLLEMFTGLRP 76
G D+++ G++L + G P
Sbjct: 283 GKEVDLWACGVILFTLLAGSPP 304
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 265 YQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCD 324
Y+ + F +V+ M G L ++L K K+ I + A+ +LH +
Sbjct: 169 YESSSFMFLVFDLMRKGELFDYLTEK---------VALSEKETRSIMRSLLEAVSFLHAN 219
Query: 325 CQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
I H +LKP N+LLDD M + DF +
Sbjct: 220 ---NIVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 202 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRV 256
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G+ + VV +M +G L ++ +++TH + +K + + VA+
Sbjct: 97 L----GICLRSEGSPLVVLPYMKHGDLRNFI--RNETH------NPTVKDLIGFGLQVAK 144
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+K+L + H +L N +LD++ V DF +AR + D +
Sbjct: 145 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE------V 54
H DL N LD++ T + DFG+AR + + F V G P M E
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
++ DV+SFG+LL E+ T P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 166 IKMKLLKTPV----YEE-KQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF--- 217
+K+ L+T V YE+ QT++ + K+L DATN S ++GAG FG V +G L
Sbjct: 12 LKLPGLRTYVDPHTYEDPTQTVHEFA-KEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPS 68
Query: 218 -DGTTIAVKVFNL-IRPGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVY 275
++A+K + R F E H NI+R+ V+ ++ +V
Sbjct: 69 KKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVT 123
Query: 276 KFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLK 335
++M NGSL+ +L D F + + + + +A +KYL H +L
Sbjct: 124 EYMENGSLDSFLRKHD--------AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLA 172
Query: 336 PSNVLLDDEMIGHVGDFSMARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
N+L++ ++ V DF ++R L D E T GK+ +R A++ R
Sbjct: 173 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 223
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + +PE + +S
Sbjct: 168 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 227
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 228 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 257
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 180 QTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 234
QT++ + K+L DATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHEFA-KEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 235 ARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTH 294
R F E H NI+R+ V+ ++ +V ++M NGSL+ +L D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDA-- 142
Query: 295 WRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
F + + + + +A +KYL H +L N+L++ ++ V DF +
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 355 ARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
AR L D E T GK+ +R A++ R
Sbjct: 194 ARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG+AR L E ++ G I + +PE + +S
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 166 IKMKLLKTPV----YEE-KQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF--- 217
+K+ L+T V YE+ QT++ + K+L DATN S ++GAG FG V +G L
Sbjct: 14 LKLPGLRTYVDPHTYEDPTQTVHEFA-KEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPS 70
Query: 218 -DGTTIAVKVFNL-IRPGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVY 275
++A+K + R F E H NI+R+ V+ ++ +V
Sbjct: 71 KKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVT 125
Query: 276 KFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLK 335
++M NGSL+ +L D F + + + + +A +KYL H +L
Sbjct: 126 EYMENGSLDSFLRKHDA--------QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 336 PSNVLLDDEMIGHVGDFSMARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
N+L++ ++ V DF ++R L D E T GK+ +R A++ R
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + +PE + +S
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ LGDFG+AR +PV T +V+ T+ Y AP+ MGS S
Sbjct: 131 HRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGSRTYSTS 189
Query: 59 -DVYSFGILLLEMFTG 73
D++S G +L EM TG
Sbjct: 190 IDIWSCGCILAEMITG 205
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 193 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGARSFK-SECKAAINIRH 250
+++ F +G G + +VY G G +A+K L G S E ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKD-DTHWRLLNFDFLIKKKLD 309
NIVR++ + + +V++FM N L++++ + R L + L+K
Sbjct: 63 ENIVRLYDVIHTENKL-----TLVFEFMDN-DLKKYMDSRTVGNTPRGLELN-LVKY--- 112
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H + +I H +LKP N+L++ +GDF +AR
Sbjct: 113 FQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G FG V+ G + +A+K IR G F E + + + H +V+++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLY--- 68
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
GV + A +V++FM +G L ++L + F + L + +DV + Y
Sbjct: 69 -GVCLEQAPI-CLVFEFMEHGCLSDYLRTQRGL--------FAAETLLGMCLDVCEGMAY 118
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
L + + H +L N L+ + + V DF M RF+ D D+ T G
Sbjct: 119 LE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTG 163
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N + + + DFG+ RF+ ++ + GT + + +PE S SS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 58 GDVYSFGILLLEMFT 72
DV+SFG+L+ E+F+
Sbjct: 185 SDVWSFGVLMWEVFS 199
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ LD + DFG A+++P T + GT Y+APE + D
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKYVPDVT--YXLCGTPDYIAPEVVSTKPYNKSIDW 186
Query: 61 YSFGILLLEMFTGLRP 76
+SFGIL+ EM G P
Sbjct: 187 WSFGILIYEMLAGYTP 202
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
A +V AL+YLH I + +LKP N+LLD + DF A+++PD
Sbjct: 112 AAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 33/196 (16%)
Query: 202 LIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGG-----ARSFKSECKAAINIRHRN 252
+IGAG FG V G L + +A+K GG R F SE H N
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLK----GGYTERQRREFLSEASIMGQFEHPN 78
Query: 253 IVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAI 312
I+R+ V+ + ++ +FM NG+L+ +L RL + F + + + +
Sbjct: 79 IIRLEGVVTN-----SMPVMILTEFMENGALDSFL--------RLNDGQFTVIQLVGMLR 125
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL----PDTDEQTRFI 368
+A ++YL + H +L N+L++ ++ V DF ++RFL D E +
Sbjct: 126 GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG 182
Query: 369 GKLNVRNFVKMALSQR 384
GK+ +R A++ R
Sbjct: 183 GKIPIRWTAPEAIAFR 198
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL------PVETSFIDVMGTIGYVAPEYGMGSEV 54
H DL N+ ++ + + DFG++RFL P ETS + I + APE +
Sbjct: 141 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKF 200
Query: 55 SSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+S D +S+GI++ E+ + G RP M D+
Sbjct: 201 TSASDAWSYGIVMWEVMSFGERPYWDMSNQDV 232
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 175 VYEE-KQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL 229
YE+ QT++ + K+L DATN S ++GAG FG V +G L ++A+K +
Sbjct: 27 TYEDPTQTVHEFA-KEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 230 -IRPGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLH 288
R F E H NI+R+ V+ ++ +V ++M NGSL+ +L
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLR 138
Query: 289 GKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGH 348
D F + + + + +A +KYL H +L N+L++ ++
Sbjct: 139 KHDA--------QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCK 187
Query: 349 VGDFSMARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
V DF ++R L D E T GK+ +R A++ R
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + +PE + +S
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARS--FKSECKAAINIRHRNIVRVFTAV 260
IG+G FG V+ G + +A+K I+ G F E + + + H +V+++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKT---IKEGSMSEDDFIEEAEVMMKLSHPKLVQLY--- 88
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
GV + A +V++FM +G L ++L + F + L + +DV + Y
Sbjct: 89 -GVCLEQAPI-CLVFEFMEHGCLSDYLRTQRGL--------FAAETLLGMCLDVCEGMAY 138
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
L C + H +L N L+ + + V DF M RF+ D D+ T G
Sbjct: 139 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTG 183
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N + + + DFG+ RF+ ++ + GT + + +PE S SS
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 58 GDVYSFGILLLEMFT 72
DV+SFG+L+ E+F+
Sbjct: 205 SDVWSFGVLMWEVFS 219
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGA--RSFKSECKAAINIRHRNIVRVFTAV 260
IG+G FG V+ G + +A+K IR G F E + + + H +V+++
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLY--- 69
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
GV + A +V +FM +G L ++L + F + L + +DV + Y
Sbjct: 70 -GVCLEQAPI-CLVTEFMEHGCLSDYLRTQRGL--------FAAETLLGMCLDVCEGMAY 119
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
L C + H +L N L+ + + V DF M RF+ D D+ T G
Sbjct: 120 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTG 164
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N + + + DFG+ RF+ ++ + GT + + +PE S SS
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 58 GDVYSFGILLLEMFT 72
DV+SFG+L+ E+F+
Sbjct: 186 SDVWSFGVLMWEVFS 200
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 26/186 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTI----AVKVFN-LIRPGGARSFKSECKAAINIRH 250
++G+G FG+VY G +G T+ A+K+ N P F E ++ H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLH-GKDDTHWRLLNFDFLIKKKLD 309
++VR+ Q +V + MP+G L E++H KD+ +LL L+
Sbjct: 77 PHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKDNIGSQLL---------LN 121
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLP-DTDEQTRFI 368
+ +A+ + YL + R+ H +L NVL+ + DF +AR L D E
Sbjct: 122 WCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 178
Query: 369 GKLNVR 374
GK+ ++
Sbjct: 179 GKMPIK 184
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+AR L + + G I ++A E + +
Sbjct: 140 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 199
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+S+G+ + E+ T G +P +G+
Sbjct: 200 SDVWSYGVTIWELMTFGGKPYDGI 223
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKP N+ + T L DFG+AR + + V+ T+ Y APE + S ++ D+
Sbjct: 135 HRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDM 194
Query: 61 YSFGILLLEMF 71
+S G + EMF
Sbjct: 195 WSVGCIFAEMF 205
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
D+ R L +LH +C I H +LKP N+L+ + DF +AR
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 26/186 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTI----AVKVFN-LIRPGGARSFKSECKAAINIRH 250
++G+G FG+VY G +G T+ A+K+ N P F E ++ H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLH-GKDDTHWRLLNFDFLIKKKLD 309
++VR+ Q +V + MP+G L E++H KD+ +LL L+
Sbjct: 100 PHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKDNIGSQLL---------LN 144
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLP-DTDEQTRFI 368
+ +A+ + YL + R+ H +L NVL+ + DF +AR L D E
Sbjct: 145 WCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 201
Query: 369 GKLNVR 374
GK+ ++
Sbjct: 202 GKMPIK 207
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+AR L + + G I ++A E + +
Sbjct: 163 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 222
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+S+G+ + E+ T G +P +G+
Sbjct: 223 SDVWSYGVTIWELMTFGGKPYDGI 246
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 180 QTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 234
QT++ + K+L DATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHEFA-KEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 235 ARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTH 294
R F E H NI+R+ V+ ++ +V ++M NGSL+ +L D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDA-- 142
Query: 295 WRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
F + + + + +A +KYL H +L N+L++ ++ V DF +
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGL 193
Query: 355 ARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
+R L D E T GK+ +R A++ R
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + +PE + +S
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 180 QTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 234
QT++ + K+L DATN S ++GAG FG V +G L ++A+K +
Sbjct: 4 QTVHEFA-KEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 60
Query: 235 ARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTH 294
R F E H NI+R+ V+ ++ +V ++M NGSL+ +L D
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDA-- 113
Query: 295 WRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
F + + + + +A +KYL H +L N+L++ ++ V DF +
Sbjct: 114 ------QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 164
Query: 355 ARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
+R L D E T GK+ +R A++ R
Sbjct: 165 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + +PE + +S
Sbjct: 141 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 200
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 201 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 230
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 180 QTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 234
QT++ + K+L DATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHEFA-KEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 235 ARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTH 294
R F E H NI+R+ V+ ++ +V ++M NGSL+ +L D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDA-- 142
Query: 295 WRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
F + + + + +A +KYL H +L N+L++ ++ V DF +
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 355 ARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
+R L D E T GK+ +R A++ R
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + +PE + +S
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKP N+ + T L DFG+AR + + V+ T+ Y APE + S ++ D+
Sbjct: 143 HRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDM 202
Query: 61 YSFGILLLEMF 71
+S G + EMF
Sbjct: 203 WSVGCIFAEMF 213
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
D+ R L +LH +C I H +LKP N+L+ + DF +AR
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 168
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 180 QTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 234
QT++ + K+L DATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHEFA-KEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 235 ARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTH 294
R F E H NI+R+ V+ ++ +V ++M NGSL+ +L D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDA-- 142
Query: 295 WRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
F + + + + +A +KYL H +L N+L++ ++ V DF +
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 355 ARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
+R L D E T GK+ +R A++ R
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + +PE + +S
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 180 QTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 234
QT++ + K+L DATN S ++GAG FG V +G L ++A+K +
Sbjct: 21 QTVHEFA-KEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 77
Query: 235 ARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTH 294
R F E H NI+R+ V+ ++ +V ++M NGSL+ +L D
Sbjct: 78 RRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDA-- 130
Query: 295 WRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
F + + + + +A +KYL H +L N+L++ ++ V DF +
Sbjct: 131 ------QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 181
Query: 355 ARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
+R L D E T GK+ +R A++ R
Sbjct: 182 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 213
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + +PE + +S
Sbjct: 158 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 217
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 218 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 247
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKP N+ + T L DFG+AR + + V+ T+ Y APE + S ++ D+
Sbjct: 135 HRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDM 194
Query: 61 YSFGILLLEMF 71
+S G + EMF
Sbjct: 195 WSVGCIFAEMF 205
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 25/174 (14%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSFK-SECKAAINIR- 249
AT+ + IG G +G+VY G +A+K + P G S + +R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRR 59
Query: 250 -----HRNIVRVF--TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDF 302
H N+VR+ A S D + K + + L +L
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDRE---IKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 303 LIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
L+++ L R L +LH +C I H +LKP N+L+ + DF +AR
Sbjct: 117 LMRQFL-------RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI-DVMGTIGYVAPEYGMGSEVSSYGD 59
H D+KP+NVF+ LGD G+ RF +T+ ++GT Y++PE + + D
Sbjct: 159 HRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSD 218
Query: 60 VYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
++S G LL EM P G D +NL +L K
Sbjct: 219 IWSLGCLLYEMAALQSPFYG---DKMNLYSLCK 248
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 31/179 (17%)
Query: 191 YDATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVK---VFNLIRPGGARSFKSECKAAI 246
Y+ F IG G F VY L DG +A+K +F+L+ E
Sbjct: 28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLK 87
Query: 247 NIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKK 306
+ H N+++ + + F+ + L L D + F +K
Sbjct: 88 QLNHPNVIKYYAS-----------------FIEDNELNIVLELADAGDLSRMIKHFKKQK 130
Query: 307 KL-------DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+L + + AL+++H R+ H ++KP+NV + + +GD + RF
Sbjct: 131 RLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKP N+ + L DFG+AR + + V+ T+ Y APE + S ++ D+
Sbjct: 143 HRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDL 202
Query: 61 YSFGILLLEMF 71
+S G + EMF
Sbjct: 203 WSVGCIFAEMF 213
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
D+ + R L +LH R+ H +LKP N+L+ + DF +AR
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKP N+ + L DFG+AR + + V+ T+ Y APE + S ++ D+
Sbjct: 143 HRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDL 202
Query: 61 YSFGILLLEMF 71
+S G + EMF
Sbjct: 203 WSVGCIFAEMF 213
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
D+ + R L +LH R+ H +LKP N+L+ + DF +AR
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 180 QTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 234
QT++ + K+L DATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHEFA-KEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 235 ARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTH 294
R F E H NI+R+ V+ ++ +V ++M NGSL+ +L D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDA-- 142
Query: 295 WRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
F + + + + +A +KYL H +L N+L++ ++ V DF +
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 355 ARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
R L D E T GK+ +R A++ R
Sbjct: 194 GRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG+ R L E ++ G I + +PE + +S
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKP N+ + L DFG+AR + + V+ T+ Y APE + S ++ D+
Sbjct: 143 HRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDL 202
Query: 61 YSFGILLLEMF 71
+S G + EMF
Sbjct: 203 WSVGCIFAEMF 213
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
D+ + R L +LH R+ H +LKP N+L+ + DF +AR
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVET------SFIDVMGTIGYVAPEYGMGSEV 54
H DLKP N+ L+++M + DFG A+ L E+ SF+ GT YV+PE
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV---GTAQYVSPELLTEKSA 211
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
S D+++ G ++ ++ GL P
Sbjct: 212 SKSSDLWALGCIIYQLVAGLPP 233
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 29/147 (19%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGDVY 61
DLKP N+ L+ + L DFG+ + + + GTI Y+APE M S + D +
Sbjct: 146 DLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWW 205
Query: 62 SFGILLLEMFTGLRPNNG---------MFKDDLNLP--------NLVKSAL--------- 95
S G L+ +M TG P G + K LNLP +L+K L
Sbjct: 206 SLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLG 265
Query: 96 --PARAEQILDVAFFQEIEEEETLYKK 120
P A ++ FF+ I EE L +K
Sbjct: 266 AGPGDAGEVQAHPFFRHINWEELLARK 292
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 166 IKMKLLKTPV----YEE-KQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF--- 217
+K+ L+T V YE+ QT++ + K+L DATN S ++GAG FG V +G L
Sbjct: 14 LKLPGLRTYVDPHTYEDPTQTVHEFA-KEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPS 70
Query: 218 -DGTTIAVKVFNL-IRPGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVY 275
++A+K + R F E H NI+R+ V+ ++ +V
Sbjct: 71 KKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVT 125
Query: 276 KFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLK 335
+ M NGSL+ +L D F + + + + +A +KYL H +L
Sbjct: 126 EXMENGSLDSFLRKHD--------AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 336 PSNVLLDDEMIGHVGDFSMARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
N+L++ ++ V DF ++R L D E T GK+ +R A++ R
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + +PE + +S
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKP N+ + T L DFG+AR + + V+ T+ Y APE + S ++ D+
Sbjct: 135 HRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDM 194
Query: 61 YSFGILLLEMF 71
+S G + EMF
Sbjct: 195 WSVGCIFAEMF 205
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 25/174 (14%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSFK-SECKAAINIR- 249
AT+ + IG G +G+VY G +A+K + P G S + +R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRR 59
Query: 250 -----HRNIVRVF--TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDF 302
H N+VR+ A S D + K + + L +L
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDRE---IKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 303 LIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
L+++ L R L +LH +C I H +LKP N+L+ + DF +AR
Sbjct: 117 LMRQFL-------RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ + + L DFG+ L + S GT + APE G V Y
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT 231
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNL 90
D++S G+L + +GL P G DD L N+
Sbjct: 232 DMWSVGVLSYILLSGLSPFGGE-NDDETLRNV 262
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 29/147 (19%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGDVY 61
DLKP N+ L+ + L DFG+ + + + GTI Y+APE M S + D +
Sbjct: 146 DLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWW 205
Query: 62 SFGILLLEMFTGLRPNNG---------MFKDDLNLP--------NLVKSAL--------- 95
S G L+ +M TG P G + K LNLP +L+K L
Sbjct: 206 SLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLG 265
Query: 96 --PARAEQILDVAFFQEIEEEETLYKK 120
P A ++ FF+ I EE L +K
Sbjct: 266 AGPGDAGEVQAHPFFRHINWEELLARK 292
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ + + L DFG+ L + S GT + APE G V Y
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT 337
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNL 90
D++S G+L + +GL P G DD L N+
Sbjct: 338 DMWSVGVLSYILLSGLSPFGGE-NDDETLRNV 368
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 33/196 (16%)
Query: 202 LIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGG-----ARSFKSECKAAINIRHRN 252
+IGAG FG V G L + +A+K GG R F SE H N
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLK----GGYTERQRREFLSEASIMGQFEHPN 76
Query: 253 IVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAI 312
I+R+ V+ + ++ +FM NG+L+ +L RL + F + + + +
Sbjct: 77 IIRLEGVVTN-----SMPVMILTEFMENGALDSFL--------RLNDGQFTVIQLVGMLR 123
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI---- 368
+A ++YL + H +L N+L++ ++ V DF ++RFL + +
Sbjct: 124 GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG 180
Query: 369 GKLNVRNFVKMALSQR 384
GK+ +R A++ R
Sbjct: 181 GKIPIRWTAPEAIAFR 196
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL------PVETSFIDVMGTIGYVAPEYGMGSEV 54
H DL N+ ++ + + DFG++RFL P TS + I + APE +
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKF 198
Query: 55 SSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+S D +S+GI++ E+ + G RP M D+
Sbjct: 199 TSASDAWSYGIVMWEVMSFGERPYWDMSNQDV 230
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 180 QTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 234
QT++ + K+L DATN S ++GAG FG V +G L ++A+K +
Sbjct: 4 QTVHEFA-KEL-DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 60
Query: 235 ARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTH 294
R F E H NI+R+ V+ ++ +V + M NGSL+ +L D
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVTEXMENGSLDSFLRKHDA-- 113
Query: 295 WRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
F + + + + +A +KYL H +L N+L++ ++ V DF +
Sbjct: 114 ------QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 164
Query: 355 ARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
+R L D E T GK+ +R A++ R
Sbjct: 165 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + +PE + +S
Sbjct: 141 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 200
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 201 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 230
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVFTAV 260
+GAG FG V+ T T +AVK ++PG +F +E ++H +V++ V
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKT---MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ ++ +FM GSL ++L + + L K +D + +A + +
Sbjct: 247 TKEPIY------IITEFMAKGSLLDFLKSDEGSKQPL-------PKLIDFSAQIAEGMAF 293
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ Q H +L+ +N+L+ ++ + DF +AR
Sbjct: 294 IE---QRNYIHRDLRAANILVSASLVCKIADFGLAR 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DL+ +N+ + + + DFG+AR + I + APE + DV
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLAR--------VGAKFPIKWTAPEAINFGSFTIKSDV 352
Query: 61 YSFGILLLEMFT-GLRPNNGM 80
+SFGILL+E+ T G P GM
Sbjct: 353 WSFGILLMEIVTYGRIPYPGM 373
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEY---GMGSEVSSY 57
H DLKP N+ LDD+M L DFG + L +V GT Y+APE M Y
Sbjct: 134 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGY 193
Query: 58 G---DVYSFGILLLEMFTGLRP 76
G D++S G+++ + G P
Sbjct: 194 GKEVDMWSTGVIMYTLLAGSPP 215
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 56/145 (38%), Gaps = 31/145 (21%)
Query: 223 AVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSGV--------DYQGARFKAVV 274
AVK+ ++ G SF +E + V + VSG Y+ F +V
Sbjct: 33 AVKIIDVT---GGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 89
Query: 275 YKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKK---KLDIAIDVARALKYLHCDCQP-RIA 330
+ M G L FD+L +K + RAL + C I
Sbjct: 90 FDLMKKGEL----------------FDYLTEKVTLSEKETRKIMRALLEVICALHKLNIV 133
Query: 331 HCNLKPSNVLLDDEMIGHVGDFSMA 355
H +LKP N+LLDD+M + DF +
Sbjct: 134 HRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 26/212 (12%)
Query: 180 QTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 234
QT++ F DATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 235 ARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTH 294
R F E H NI+R+ V+ ++ +V + M NGSL+ +L D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTK-----SKPVMIVTEXMENGSLDSFLRKHDA-- 142
Query: 295 WRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
F + + + + +A +KYL H +L N+L++ ++ V DF +
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGL 193
Query: 355 ARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
+R L D E T GK+ +R A++ R
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + +PE + +S
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI+L E+ + G RP M D+
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEY---GMGSEVSSY 57
H DLKP N+ LDD+M L DFG + L +V GT Y+APE M Y
Sbjct: 147 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGY 206
Query: 58 G---DVYSFGILLLEMFTGLRP 76
G D++S G+++ + G P
Sbjct: 207 GKEVDMWSTGVIMYTLLAGSPP 228
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 56/145 (38%), Gaps = 31/145 (21%)
Query: 223 AVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSGV--------DYQGARFKAVV 274
AVK+ ++ G SF +E + V + VSG Y+ F +V
Sbjct: 46 AVKIIDVT---GGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 275 YKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKK---KLDIAIDVARALKYLHCDCQP-RIA 330
+ M G L FD+L +K + RAL + C I
Sbjct: 103 FDLMKKGEL----------------FDYLTEKVTLSEKETRKIMRALLEVICALHKLNIV 146
Query: 331 HCNLKPSNVLLDDEMIGHVGDFSMA 355
H +LKP N+LLDD+M + DF +
Sbjct: 147 HRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 203 IGAGNFGSV----YNGTLFDGT--TIAVKVFNL-IRPGGARSFKSECKAAINIRHRNIVR 255
+G G+FG V Y+ T DGT +AVK P +K E + H +I++
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
QG + +V +++P GSL ++L +LL F A +
Sbjct: 81 YKGCCED---QGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF----------AQQIC 127
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ YLH H NL NVLLD++ + +GDF +A+ +P+ E R
Sbjct: 128 EGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H +L NV LD++ +GDFG+A+ +P + V + + APE +
Sbjct: 140 HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYY 199
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG+ L E+ T
Sbjct: 200 ASDVWSFGVTLYELLT 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 34/221 (15%)
Query: 182 INNLSFKDLYDATNGFSSA---------NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR 231
I+ +F+D +A F+ +IGAG FG V +G L G ++
Sbjct: 11 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK 70
Query: 232 PGGA----RSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWL 287
G R F SE H N++ + V+ + ++ +FM NGSL+ +L
Sbjct: 71 SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTK-----STPVMIITEFMENGSLDSFL 125
Query: 288 HGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIG 347
D F + + + + +A +KYL H +L N+L++ ++
Sbjct: 126 RQNDG--------QFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVC 174
Query: 348 HVGDFSMARFLPDTDEQTRFI----GKLNVRNFVKMALSQR 384
V DF ++RFL D + GK+ +R A+ R
Sbjct: 175 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 215
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL------PVETSFIDVMGTIGYVAPEYGMGSEV 54
H DL N+ ++ + + DFG++RFL P TS + I + APE +
Sbjct: 158 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 217
Query: 55 SSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+S DV+S+GI++ E+ + G RP M D+
Sbjct: 218 TSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 249
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 39/207 (18%)
Query: 171 LKTPVYEEKQTINNLSFKDLYDATNGFSSANL-----------------IGAGNFGSVYN 213
L P E T+ +L +YD T S + L IG G FG V+
Sbjct: 5 LDRPFISEGTTLKDL----IYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWR 60
Query: 214 GTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAV 273
G + G +AVK+F+ R + ++E + +RH NI+ F A D +
Sbjct: 61 GK-WRGEEVAVKIFS-SREERSWFREAEIYQTVMLRHENILG-FIAADNKDNGTWTQLWL 117
Query: 274 VYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDC-----QPR 328
V + +GSL ++L+ + ++ + +A+ A L +LH + +P
Sbjct: 118 VSDYHEHGSLFDYLN----------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 167
Query: 329 IAHCNLKPSNVLLDDEMIGHVGDFSMA 355
IAH +LK N+L+ + D +A
Sbjct: 168 IAHRDLKSKNILVKKNGTCCIADLGLA 194
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-----MGTIGYVAPEYGMGS--- 52
H DLK N+ + T + D G+A T ID+ +GT Y+APE S
Sbjct: 170 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 229
Query: 53 ---EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLP 88
E D+Y+ G++ E+ R + G +D LP
Sbjct: 230 KHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLP 266
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 203 IGAGNFGSV----YNGTLFDGT--TIAVKVFNL-IRPGGARSFKSECKAAINIRHRNIVR 255
+G G+FG V Y+ T DGT +AVK P +K E + H +I++
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
QG + +V +++P GSL ++L +LL F A +
Sbjct: 81 YKGCCED---QGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF----------AQQIC 127
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ YLH H NL NVLLD++ + +GDF +A+ +P+ E R
Sbjct: 128 EGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H +L NV LD++ +GDFG+A+ +P + V + + APE +
Sbjct: 140 HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYY 199
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG+ L E+ T
Sbjct: 200 ASDVWSFGVTLYELLT 215
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEY---GMGSEVSSY 57
H DLKP N+ LDD+M L DFG + L V GT Y+APE M Y
Sbjct: 147 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGY 206
Query: 58 G---DVYSFGILLLEMFTGLRP 76
G D++S G+++ + G P
Sbjct: 207 GKEVDMWSTGVIMYTLLAGSPP 228
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 56/145 (38%), Gaps = 31/145 (21%)
Query: 223 AVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSGV--------DYQGARFKAVV 274
AVK+ ++ G SF +E + V + VSG Y+ F +V
Sbjct: 46 AVKIIDVT---GGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 275 YKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKK---KLDIAIDVARALKYLHCDCQP-RIA 330
+ M G L FD+L +K + RAL + C I
Sbjct: 103 FDLMKKGEL----------------FDYLTEKVTLSEKETRKIMRALLEVICALHKLNIV 146
Query: 331 HCNLKPSNVLLDDEMIGHVGDFSMA 355
H +LKP N+LLDD+M + DF +
Sbjct: 147 HRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H D+ NV L + A +GDFG+AR + ++++I V G + ++APE +
Sbjct: 187 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTV 245
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMF 81
DV+S+GILL E+F+ GL P G+
Sbjct: 246 QSDVWSYGILLWEIFSLGLNPYPGIL 271
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 24/204 (11%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLF-----DGT-TIAVKVFNLIRPGGAR-SFKSECKAAIN 247
N +GAG FG V T F D +AVK+ + + SE K +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 248 I-RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKD-----DTHWRLLNFD 301
+ +H NIV + A + + G V+ ++ G L +L K D + + N
Sbjct: 106 LGQHENIVNLLGACT---HGGPVL--VITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
+ L + VA+ + +L H ++ NVLL + + +GDF +AR D
Sbjct: 161 ASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR---DI 214
Query: 362 DEQTRFIGKLNVRNFVKMALSQRV 385
+ +I K N R VK + +
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESI 238
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H D+ NV L + A +GDFG+AR + ++++I V G + ++APE +
Sbjct: 183 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTV 241
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMF 81
DV+S+GILL E+F+ GL P G+
Sbjct: 242 QSDVWSYGILLWEIFSLGLNPYPGIL 267
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 28/204 (13%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLF-----DGT-TIAVKVFNLIRPGGAR-SFKSECKAAIN 247
N +GAG FG V T F D +AVK+ + + SE K +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 248 I-RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK-----DDTHWRLLNFD 301
+ +H NIV + A + + G V+ ++ G L +L K D R L
Sbjct: 106 LGQHENIVNLLGACT---HGGPVL--VITEYCCYGDLLNFLRRKAEADLDKEDGRPLE-- 158
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
++ L + VA+ + +L H ++ NVLL + + +GDF +AR D
Sbjct: 159 --LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR---DI 210
Query: 362 DEQTRFIGKLNVRNFVKMALSQRV 385
+ +I K N R VK + +
Sbjct: 211 MNDSNYIVKGNARLPVKWMAPESI 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVET------SFIDVMGTIGYVAPEYGMGSEV 54
H DLKP N+ L+++M + DFG A+ L E+ SF+ GT YV+PE
Sbjct: 152 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV---GTAQYVSPELLTEKSA 208
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPP 230
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H D+ NV L + A +GDFG+AR + ++++I V G + ++APE +
Sbjct: 187 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTV 245
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMF 81
DV+S+GILL E+F+ GL P G+
Sbjct: 246 QSDVWSYGILLWEIFSLGLNPYPGIL 271
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 24/204 (11%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGA---RSFKSECKAAIN 247
N +GAG FG V T F + + V V L A + SE K +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 248 I-RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKD-----DTHWRLLNFD 301
+ +H NIV + A + + G V+ ++ G L +L K D + + N
Sbjct: 106 LGQHENIVNLLGACT---HGGPVL--VITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
+ L + VA+ + +L H ++ NVLL + + +GDF +AR D
Sbjct: 161 LSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR---DI 214
Query: 362 DEQTRFIGKLNVRNFVKMALSQRV 385
+ +I K N R VK + +
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESI 238
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPE-----YGMGSEVS 55
H DLKP NV LD M A + DFG++ + D G+ Y APE G EV
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEV- 192
Query: 56 SYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
D++S G++L + G P DD ++P L K
Sbjct: 193 ---DIWSCGVILYALLCGTLPF-----DDEHVPTLFK 221
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 35/174 (20%)
Query: 200 ANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSF------KSECKAAINIRHRN 252
+ +G G FG V G G +AVK+ N + RS K E + RH +
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK---IRSLDVVGKIKREIQNLKLFRHPH 72
Query: 253 IVRVFTAVSG-VDYQGARFKAVVYKFMPNGSLEEWL--HGK-DDTHWRLLNFDFLIKKKL 308
I++++ +S D+ +V +++ G L +++ HG+ ++ R L L
Sbjct: 73 IIKLYQVISTPTDF------FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL----- 121
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A+ Y H + + H +LKP NVLLD M + DF ++ + D +
Sbjct: 122 -------SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H D+ NV L + A +GDFG+AR + ++++I V G + ++APE +
Sbjct: 175 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTV 233
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMF 81
DV+S+GILL E+F+ GL P G+
Sbjct: 234 QSDVWSYGILLWEIFSLGLNPYPGIL 259
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 28/204 (13%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGA---RSFKSECKAAIN 247
N +GAG FG V T F + + V V L A + SE K +
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 248 I-RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK-----DDTHWRLLNFD 301
+ +H NIV + A + + G V+ ++ G L +L K D R L
Sbjct: 98 LGQHENIVNLLGACT---HGGPVL--VITEYCCYGDLLNFLRRKAEADLDKEDGRPLE-- 150
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
++ L + VA+ + +L H ++ NVLL + + +GDF +AR D
Sbjct: 151 --LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR---DI 202
Query: 362 DEQTRFIGKLNVRNFVKMALSQRV 385
+ +I K N R VK + +
Sbjct: 203 MNDSNYIVKGNARLPVKWMAPESI 226
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVET------SFIDVMGTIGYVAPEYGMGSEV 54
H DLKP N+ L+++M + DFG A+ L E+ SF+ GT YV+PE
Sbjct: 156 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV---GTAQYVSPELLTEKSA 212
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPP 234
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 203 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGARSFKSECKAAINIRHRNIV 254
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 16 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 255 RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDV 314
R++ V + +V + P GSL + L K H FL+ A+ V
Sbjct: 75 RLYGVVLTPPMK------MVTELAPLGSLLDRLR-KHQGH-------FLLGTLSRYAVQV 120
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
A + YL R H +L N+LL + +GDF + R LP D+
Sbjct: 121 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-----TIGYVAPEYGMGSEVS 55
H DL N+ L +GDFG+ R LP VM + APE S
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX-VMQEHRKVPFAWCAPESLKTRTFS 192
Query: 56 SYGDVYSFGILLLEMFT-GLRPNNGM 80
D + FG+ L EMFT G P G+
Sbjct: 193 HASDTWMFGVTLWEMFTYGQEPWIGL 218
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 203 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G G FG V+ + D +AVK + F+ E + N++H +IV+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKD-----DTHWRLLNFDFLIKKKLD 309
+ GV G +V+++M +G L ++L HG D D R + + + L
Sbjct: 83 Y----GVCGDGDPL-IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
IA +A + YL H +L N L+ ++ +GDF M+R + TD
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 187
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + + +GDFG++R + T + V G I ++ PE M + ++
Sbjct: 156 HRDLATRNCLVGANLLVKIGDFGMSRDV-YSTDYYRVGGHTMLPIRWMPPESIMYRKFTT 214
Query: 57 YGDVYSFGILLLEMFT-GLRP 76
DV+SFG++L E+FT G +P
Sbjct: 215 ESDVWSFGVILWEIFTYGKQP 235
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPE-----YGMGSEVS 55
H DLKP N+ LDD + + DFG++ + G+ Y APE G EV
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEV- 189
Query: 56 SYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSA 94
DV+S GI+L M G P DD +PNL K
Sbjct: 190 ---DVWSCGIVLYVMLVGRLPF-----DDEFIPNLFKKV 220
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 300 FDFLIKKKLDIAIDVARALKYLHCDCQ----PRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
FD++++KK + R + + C + +I H +LKP N+LLDD + + DF ++
Sbjct: 96 FDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
Query: 356 RFLPD 360
+ D
Sbjct: 156 NIMTD 160
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 131 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 190
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 191 SDLWALGCIIYQLVAGLPP 209
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 116 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 132 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 191
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 192 SDLWALGCIIYQLVAGLPP 210
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 117 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 203 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGARSFKSECKAAINIRHRNIV 254
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 16 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 255 RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDV 314
R++ V + +V + P GSL + L K H FL+ A+ V
Sbjct: 75 RLYGVVLTPPMK------MVTELAPLGSLLDRLR-KHQGH-------FLLGTLSRYAVQV 120
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
A + YL R H +L N+LL + +GDF + R LP D+
Sbjct: 121 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-----TIGYVAPEYGMGSEVS 55
H DL N+ L +GDFG+ R LP VM + APE S
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY-VMQEHRKVPFAWCAPESLKTRTFS 192
Query: 56 SYGDVYSFGILLLEMFT-GLRPNNGM 80
D + FG+ L EMFT G P G+
Sbjct: 193 HASDTWMFGVTLWEMFTYGQEPWIGL 218
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 130 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 189
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 190 SDLWALGCIIYQLVAGLPP 208
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 115 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 203 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGARSFKSECKAAINIRHRNIV 254
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 26 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 255 RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDV 314
R++ V + +V + P GSL + L K H FL+ A+ V
Sbjct: 85 RLYGVVLTPPMK------MVTELAPLGSLLDRLR-KHQGH-------FLLGTLSRYAVQV 130
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
A + YL R H +L N+LL + +GDF + R LP D+
Sbjct: 131 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-----TIGYVAPEYGMGSEVS 55
H DL N+ L +GDFG+ R LP VM + APE S
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY-VMQEHRKVPFAWCAPESLKTRTFS 202
Query: 56 SYGDVYSFGILLLEMFT-GLRPNNGM 80
D + FG+ L EMFT G P G+
Sbjct: 203 HASDTWMFGVTLWEMFTYGQEPWIGL 228
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 203 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGARSFKSECKAAINIRHRNIV 254
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 26 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 255 RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDV 314
R++ V + +V + P GSL + L K H FL+ A+ V
Sbjct: 85 RLYGVVLTPPMK------MVTELAPLGSLLDRLR-KHQGH-------FLLGTLSRYAVQV 130
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
A + YL R H +L N+LL + +GDF + R LP D+
Sbjct: 131 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-----TIGYVAPEYGMGSEVS 55
H DL N+ L +GDFG+ R LP VM + APE S
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX-VMQEHRKVPFAWCAPESLKTRTFS 202
Query: 56 SYGDVYSFGILLLEMFT-GLRPNNGM 80
D + FG+ L EMFT G P G+
Sbjct: 203 HASDTWMFGVTLWEMFTYGQEPWIGL 228
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 133 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 192
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 193 SDLWALGCIIYQLVAGLPP 211
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 118 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H D+ NV L + A +GDFG+AR + ++++I V G + ++APE +
Sbjct: 189 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTV 247
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMF 81
DV+S+GILL E+F+ GL P G+
Sbjct: 248 QSDVWSYGILLWEIFSLGLNPYPGIL 273
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 83/216 (38%), Gaps = 46/216 (21%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGA---RSFKSECKAAIN 247
N +GAG FG V T F + + V V L A + SE K +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 248 I-RHRNIVRVFTAVSG-------VDY----------QGARFKAVVYKFMPNGSLEEWLHG 289
+ +H NIV + A + +Y + R + Y + P+ + EE L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 290 KDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
+D LL+F + VA+ + +L H ++ NVLL + + +
Sbjct: 166 RD-----LLHF----------SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKI 207
Query: 350 GDFSMARFLPDTDEQTRFIGKLNVRNFVKMALSQRV 385
GDF +AR D + +I K N R VK + +
Sbjct: 208 GDFGLAR---DIMNDSNYIVKGNARLPVKWMAPESI 240
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 203 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGARSFKSECKAAINIRHRNIV 254
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 20 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 255 RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDV 314
R++ V + +V + P GSL + L K H FL+ A+ V
Sbjct: 79 RLYGVVLTPPMK------MVTELAPLGSLLDRLR-KHQGH-------FLLGTLSRYAVQV 124
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
A + YL R H +L N+LL + +GDF + R LP D+
Sbjct: 125 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-----TIGYVAPEYGMGSEVS 55
H DL N+ L +GDFG+ R LP VM + APE S
Sbjct: 138 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY-VMQEHRKVPFAWCAPESLKTRTFS 196
Query: 56 SYGDVYSFGILLLEMFT-GLRPNNGM 80
D + FG+ L EMFT G P G+
Sbjct: 197 HASDTWMFGVTLWEMFTYGQEPWIGL 222
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV----MGTIGYVAPEYGMGSEVSS 56
H DL N+ ++ E + DFG+A+ LP++ + V I + APE + S
Sbjct: 137 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSR 196
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 197 QSDVWSFGVVLYELFT 212
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK P R F+ E + + IV+
Sbjct: 18 LGKGNFGSVELCRYD-PLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G Q R +V +++P+G L ++L H L+ L L + + +
Sbjct: 77 RGVSYGPGRQSLR---LVMEYLPSGCLRDFLQ----RHRARLDASRL----LLYSSQICK 125
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLP 359
++YL R H +L N+L++ E + DF +A+ LP
Sbjct: 126 GMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 165
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 32/168 (19%)
Query: 206 GNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECK--AAINIRHRNIVRVFTAVSGV 263
G FG V+ L + +AVK+F L +S++SE + + ++H N+++ A
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPL---QDKQSWQSEREIFSTPGMKHENLLQFIAA---- 77
Query: 264 DYQGARFKAVVY---KFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ +G+ + ++ F GSL ++L G T W L +A ++R L Y
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGNIIT-WNEL---------CHVAETMSRGLSY 127
Query: 321 LHCDC--------QPRIAHCNLKPSNVLLDDEMIGHVGDFSMA-RFLP 359
LH D +P IAH + K NVLL ++ + DF +A RF P
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEP 175
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA-RFLPVETSFIDVMGTIG---YVAPEYGMGS---- 52
H D K NV L ++TA L DFG+A RF P + D G +G Y+APE G+
Sbjct: 146 HRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPG-DTHGQVGTRRYMAPEVLEGAINFQ 204
Query: 53 -EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLP 88
+ D+Y+ G++L E+ + + +G D+ LP
Sbjct: 205 RDAFLRIDMYAMGLVLWELVSRCKAADGPV-DEYMLP 240
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 203 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGARSFKSECKAAINIRHRNIV 254
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 20 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 255 RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDV 314
R++ V + +V + P GSL + L K H FL+ A+ V
Sbjct: 79 RLYGVVLTPPMK------MVTELAPLGSLLDRLR-KHQGH-------FLLGTLSRYAVQV 124
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
A + YL R H +L N+LL + +GDF + R LP D+
Sbjct: 125 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-----TIGYVAPEYGMGSEVS 55
H DL N+ L +GDFG+ R LP VM + APE S
Sbjct: 138 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY-VMQEHRKVPFAWCAPESLKTRTFS 196
Query: 56 SYGDVYSFGILLLEMFT-GLRPNNGM 80
D + FG+ L EMFT G P G+
Sbjct: 197 HASDTWMFGVTLWEMFTYGQEPWIGL 222
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KPSN+ ++ L DFG++ L +++ +GT Y++PE G+ S D+
Sbjct: 190 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDI 248
Query: 61 YSFGILLLEMFTGLRP 76
+S G+ L+EM G P
Sbjct: 249 WSMGLSLVEMAVGRYP 264
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 178 EKQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGAR 236
+KQ + L D F + +GAGN G V+ + G +A K+ +L
Sbjct: 58 QKQKVGELKDDD-------FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL------- 103
Query: 237 SFKSECKAAIN---IRHRNIVRVFTAVSGVDYQGARFK----AVVYKFMPNGSLEEWLHG 289
E K AI IR ++ + V + GA + ++ + M GSL++ L
Sbjct: 104 ----EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 159
Query: 290 KDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
++L ++I V + L YL + +I H ++KPSN+L++ +
Sbjct: 160 AGRIPEQILG---------KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKL 208
Query: 350 GDFSMARFLPDTDEQTRFIG 369
DF ++ L D+ + F+G
Sbjct: 209 CDFGVSGQLIDSMANS-FVG 227
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 203 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGARSFKSECKAAINIRHRNIV 254
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 16 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 255 RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDV 314
R++ V + +V + P GSL + L K H FL+ A+ V
Sbjct: 75 RLYGVVLTPPMK------MVTELAPLGSLLDRLR-KHQGH-------FLLGTLSRYAVQV 120
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
A + YL R H +L N+LL + +GDF + R LP D+
Sbjct: 121 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-----TIGYVAPEYGMGSEVS 55
H DL N+ L +GDFG+ R LP VM + APE S
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY-VMQEHRKVPFAWCAPESLKTRTFS 192
Query: 56 SYGDVYSFGILLLEMFT-GLRPNNGM 80
D + FG+ L EMFT G P G+
Sbjct: 193 HASDTWMFGVTLWEMFTYGQEPWIGL 218
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV----MGTIGYVAPEYGMGSEVSS 56
H DL N+ ++ E + DFG+A+ LP++ + V I + APE + S
Sbjct: 150 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSR 209
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 210 QSDVWSFGVVLYELFT 225
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK P R F+ E + + IV+
Sbjct: 31 LGKGNFGSVELCRYD-PLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G Q R +V +++P+G L ++L H L+ + L + + +
Sbjct: 90 RGVSYGPGRQSLR---LVMEYLPSGCLRDFLQ----RHRARLD----ASRLLLYSSQICK 138
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLP 359
++YL R H +L N+L++ E + DF +A+ LP
Sbjct: 139 GMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV----MGTIGYVAPEYGMGSEVSS 56
H DL N+ ++ E + DFG+A+ LP++ + V I + APE + S
Sbjct: 138 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSR 197
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 198 QSDVWSFGVVLYELFT 213
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK P R F+ E + + IV+
Sbjct: 19 LGKGNFGSVELCRYD-PLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
G Q R +V +++P+G L ++L H L+ L L + + +
Sbjct: 78 RGVSYGPGRQSLR---LVMEYLPSGCLRDFLQ----RHRARLDASRL----LLYSSQICK 126
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLP 359
++YL R H +L N+L++ E + DF +A+ LP
Sbjct: 127 GMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 166
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 137 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 196
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 197 SDLWALGCIIYQLVAGLPP 215
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 122 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KPSN+ ++ L DFG++ L +++ +GT Y++PE G+ S D+
Sbjct: 155 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDI 213
Query: 61 YSFGILLLEMFTGLRP 76
+S G+ L+EM G P
Sbjct: 214 WSMGLSLVEMAVGRYP 229
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 178 EKQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGAR 236
+KQ + L D F + +GAGN G V+ + G +A K+ +L
Sbjct: 23 QKQKVGELKDDD-------FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL------- 68
Query: 237 SFKSECKAAIN---IRHRNIVRVFTAVSGVDYQGARFK----AVVYKFMPNGSLEEWLHG 289
E K AI IR ++ + V + GA + ++ + M GSL++ L
Sbjct: 69 ----EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 124
Query: 290 KDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
++L ++I V + L YL + +I H ++KPSN+L++ +
Sbjct: 125 AGRIPEQILG---------KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKL 173
Query: 350 GDFSMARFLPDTDEQTRFIG 369
DF ++ L D+ + F+G
Sbjct: 174 CDFGVSGQLIDSMANS-FVG 192
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKS 214
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 215 SDLWALGCIIYQLVAGLPP 233
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 186 SFKDL-YDATNGFSSANL-----------------IGAGNFGSVYNGTLFDGTTIAVKVF 227
+ KDL YD T S + L IG G FG V+ G + G +AVK+F
Sbjct: 2 TLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGK-WRGEEVAVKIF 60
Query: 228 NLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWL 287
+ R + ++E + +RH NI+ F A D +V + +GSL ++L
Sbjct: 61 S-SREERSWFREAEIYQTVMLRHENILG-FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 118
Query: 288 HGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDC-----QPRIAHCNLKPSNVLLD 342
+ + ++ + +A+ A L +LH + +P IAH +LK N+L+
Sbjct: 119 N----------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 168
Query: 343 DEMIGHVGDFSMA 355
+ D +A
Sbjct: 169 KNGTCCIADLGLA 181
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-----MGTIGYVAPEYGMGS--- 52
H DLK N+ + T + D G+A T ID+ +GT Y+APE S
Sbjct: 157 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 216
Query: 53 ---EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLP 88
E D+Y+ G++ E+ R + G +D LP
Sbjct: 217 KHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLP 253
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKS 212
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 213 SDLWALGCIIYQLVAGLPP 231
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-MGTIGYVAPEYGMGSEVSSYGD 59
H D+K N+FL + T LGDFGIAR L +GT Y++PE ++ D
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSD 207
Query: 60 VYSFGILLLEMFT 72
+++ G +L E+ T
Sbjct: 208 IWALGCVLYELCT 220
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Query: 203 IGAGNFG-SVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAI--NIRHRNIVRVFTA 259
IG G+FG ++ + DG +K N+ R +S + A+ N++H NIV+ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALK 319
+ G+ + +V + G L + ++ + L D + LD + + ALK
Sbjct: 92 F---EENGSLY--IVMDYCEGGDLFKRINAQKGV---LFQEDQI----LDWFVQICLALK 139
Query: 320 YLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
++H +I H ++K N+ L + +GDF +AR L T E R
Sbjct: 140 HVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 215 SDLWALGCIIYQLVAGLPP 233
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 203 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G G FG V+ + D +AVK + F E + N++H +IV+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLN--FDFLIKKKLDIAI 312
+ GV +G +V+++M +G L ++L HG D N + + L IA
Sbjct: 81 Y----GVCVEGDPL-IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+A + YL H +L N L+ + ++ +GDF M+R + TD
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 182
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + + + +GDFG++R + T + V G I ++ PE M + ++
Sbjct: 151 HRDLATRNCLVGENLLVKIGDFGMSRDV-YSTDYYRVGGHTMLPIRWMPPESIMYRKFTT 209
Query: 57 YGDVYSFGILLLEMFT-GLRP 76
DV+S G++L E+FT G +P
Sbjct: 210 ESDVWSLGVVLWEIFTYGKQP 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 212
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 213 SDLWALGCIIYQLVAGLPP 231
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H D+ NV L + A +GDFG+AR + ++++I V G + ++APE +
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTV 239
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMF 81
DV+S+GILL E+F+ GL P G+
Sbjct: 240 QSDVWSYGILLWEIFSLGLNPYPGIL 265
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 81/215 (37%), Gaps = 37/215 (17%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGA---RSFKSECKAAIN 247
N +GAG FG V T F + + V V L A + SE K +
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 248 I-RHRNIVRVFTAVSG----------------VDYQGARFKAVVYKFMPNGSLEEWLHGK 290
+ +H NIV + A + +++ + +A++ + G E L +
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 291 DDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVG 350
D L + L + VA+ + +L H ++ NVLL + + +G
Sbjct: 151 DGRPLELRDL-------LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 200
Query: 351 DFSMARFLPDTDEQTRFIGKLNVRNFVKMALSQRV 385
DF +AR D + +I K N R VK + +
Sbjct: 201 DFGLAR---DIMNDSNYIVKGNARLPVKWMAPESI 232
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 33/179 (18%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGA-------RSFKSECKA 244
A N IG G FG V+ G L D + +A+K L G + F+ E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 245 AINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLI 304
N+ H NIV+++ G+ + R +V +F+P G D + RLL+ I
Sbjct: 77 MSNLNHPNIVKLY----GLMHNPPR---MVMEFVPCG----------DLYHRLLDKAHPI 119
Query: 305 KK--KLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLD--DE---MIGHVGDFSMAR 356
K KL + +D+A ++Y+ + P I H +L+ N+ L DE + V DFS+++
Sbjct: 120 KWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 1 HCDLKPSNVFLD--DE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVS 55
H DL+ N+FL DE + A + DF +++ S ++G ++APE +G+E
Sbjct: 147 HRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAPE-TIGAEEE 203
Query: 56 SY---GDVYSFGILLLEMFTGLRP 76
SY D YSF ++L + TG P
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGP 227
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR-FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLK N+ LD + + DFG+ + + + + GT Y+APE +G + + D +
Sbjct: 144 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWW 203
Query: 62 SFGILLLEMFTGLRPNNGMFKDDL 85
SFG+LL EM G P +G +++L
Sbjct: 204 SFGVLLYEMLIGQSPFHGQDEEEL 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 212
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 213 SDLWALGCIIYQLVAGLPP 231
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 201 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGA----RSFKSECKAAINIRHRNIVR 255
+IG+G+ G V G L G ++ G R F SE H NI+R
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
+ GV +G R +V ++M NGSL DT R + F I + + + V
Sbjct: 115 L----EGVVTRG-RLAMIVTEYMENGSL--------DTFLRTHDGQFTIMQLVGMLRGVG 161
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDE--QTRFIGKLNV 373
++YL H +L NVL+D ++ V DF ++R L D + T GK+ +
Sbjct: 162 AGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPI 218
Query: 374 RNFVKMALSQRV 385
R A++ R
Sbjct: 219 RWTAPEAIAFRT 230
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL NV +D + + DFG++R L + + G I + APE SS
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSS 233
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+SFG+++ E+ G RP M D+
Sbjct: 234 ASDVWSFGVVMWEVLAYGERPYWNMTNRDV 263
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPV-ETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLKP NV LDD+ + D G+A L +T GT G++APE +G E D +
Sbjct: 314 DLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF 373
Query: 62 SFGILLLEMFTGLRP 76
+ G+ L EM P
Sbjct: 374 ALGVTLYEMIAARGP 388
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ L++LH Q I + +LKP NVLLDD+ + D +A
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPV-ETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLKP NV LDD+ + D G+A L +T GT G++APE +G E D +
Sbjct: 314 DLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF 373
Query: 62 SFGILLLEMFTGLRP 76
+ G+ L EM P
Sbjct: 374 ALGVTLYEMIAARGP 388
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ L++LH Q I + +LKP NVLLDD+ + D +A
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KPSN+ ++ L DFG++ L +++ +GT Y+APE G+ S D+
Sbjct: 138 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMAPERLQGTHYSVQSDI 196
Query: 61 YSFGILLLEMFTGLRP 76
+S G+ L+E+ G P
Sbjct: 197 WSMGLSLVELAVGRYP 212
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 215 SDLWALGCIIYQLVAGLPP 233
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 152 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 211
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 212 SDLWALGCIIYQLVAGLPP 230
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KPSN+ ++ L DFG++ L +++ +GT Y++PE G+ S D+
Sbjct: 147 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDI 205
Query: 61 YSFGILLLEMFTGLRP 76
+S G+ L+EM G P
Sbjct: 206 WSMGLSLVEMAVGRYP 221
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 178 EKQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGAR 236
+KQ + L D F + +GAGN G V+ + G +A K+ +L
Sbjct: 15 QKQKVGELKDDD-------FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL------- 60
Query: 237 SFKSECKAAIN---IRHRNIVRVFTAVSGVDYQGARFK----AVVYKFMPNGSLEEWLHG 289
E K AI IR ++ + V + GA + ++ + M GSL++ L
Sbjct: 61 ----EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 116
Query: 290 KDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
++L ++I V + L YL + +I H ++KPSN+L++ +
Sbjct: 117 AGRIPEQILG---------KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKL 165
Query: 350 GDFSMARFLPDTDEQTRFIG 369
DF ++ L D+ + F+G
Sbjct: 166 CDFGVSGQLIDSMANS-FVG 184
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 212
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 213 SDLWALGCIIYQLVAGLPP 231
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 160 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 219
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 220 SDLWALGCIIYQLVAGLPP 238
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 145 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 156 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 215
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 216 SDLWALGCIIYQLVAGLPP 234
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 215 SDLWALGCIIYQLVAGLPP 233
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KPSN+ ++ L DFG++ L ++ + +GT Y++PE G+ S D+
Sbjct: 131 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDEMANEFVGTRSYMSPERLQGTHYSVQSDI 189
Query: 61 YSFGILLLEMFTGLRPNNGM 80
+S G+ L+EM G P M
Sbjct: 190 WSMGLSLVEMAVGRYPRPPM 209
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 31/181 (17%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGARSFKSECKAAIN---IRHRN 252
F + +GAGN G V+ + G +A K+ +L E K AI IR
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRELQ 59
Query: 253 IVRVFTAVSGVDYQGARFK----AVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
++ + V + GA + ++ + M GSL++ L ++L
Sbjct: 60 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--------- 110
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI 368
++I V + L YL + +I H ++KPSN+L++ + DF ++ L D + F+
Sbjct: 111 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-EMANEFV 167
Query: 369 G 369
G
Sbjct: 168 G 168
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPV-ETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLKP NV LDD+ + D G+A L +T GT G++APE +G E D +
Sbjct: 314 DLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF 373
Query: 62 SFGILLLEMFTGLRP 76
+ G+ L EM P
Sbjct: 374 ALGVTLYEMIAARGP 388
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ L++LH Q I + +LKP NVLLDD+ + D +A
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 215 SDLWALGCIIYQLVAGLPP 233
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 201 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGA----RSFKSECKAAINIRHRNIVR 255
+IG+G+ G V G L G ++ G R F SE H NI+R
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
+ GV +G R +V ++M NGSL DT R + F I + + + V
Sbjct: 115 L----EGVVTRG-RLAMIVTEYMENGSL--------DTFLRTHDGQFTIMQLVGMLRGVG 161
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ--TRFIGKLNV 373
++YL H +L NVL+D ++ V DF ++R L D + T GK+ +
Sbjct: 162 AGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPI 218
Query: 374 RNFVKMALSQRV 385
R A++ R
Sbjct: 219 RWTAPEAIAFRT 230
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL NV +D + + DFG++R L + ++ G I + APE SS
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSS 233
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+SFG+++ E+ G RP M D+
Sbjct: 234 ASDVWSFGVVMWEVLAYGERPYWNMTNRDV 263
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPV-ETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLKP NV LDD+ + D G+A L +T GT G++APE +G E D +
Sbjct: 314 DLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYF 373
Query: 62 SFGILLLEMFTGLRP 76
+ G+ L EM P
Sbjct: 374 ALGVTLYEMIAARGP 388
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ L++LH Q I + +LKP NVLLDD+ + D +A
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 65 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 111
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTA 184
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 65 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 111
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 184 VDIWSLGCIFAEMVT 198
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 64 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 110
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 65 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 111
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 65 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 111
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KPSN+ ++ L DFG++ L +++ +GT Y++PE G+ S D+
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 61 YSFGILLLEMFTGLRP 76
+S G+ L+EM G P
Sbjct: 187 WSMGLSLVEMAVGRYP 202
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 197 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSFKSECKAAIN---IRHRN 252
F + +GAGN G V+ + G +A K+ +L E K AI IR
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRELQ 56
Query: 253 IVRVFTAVSGVDYQGARFK----AVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
++ + V + GA + ++ + M GSL++ L ++L
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--------- 107
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI 368
++I V + L YL + +I H ++KPSN+L++ + DF ++ L D+ + F+
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FV 164
Query: 369 G 369
G
Sbjct: 165 G 165
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 65 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 111
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 184 VDIWSLGCIFAEMVT 198
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 64 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 110
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 128 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 186
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 187 VDIWSLGCIFAEMVT 201
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 67 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 113
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 187
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 188 VDIWSLGCIFAEMVT 202
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + F+ V + L++++ T L LIK L
Sbjct: 68 VKLLDVIHTENKLYLVFEHV------DQDLKKFMDASALTGIPLP----LIKSYL---FQ 114
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 127 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 185
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 186 VDIWSLGCIFAEMVT 200
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 66 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 112
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 187
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 188 VDIWSLGCIFAEMVT 202
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 68 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 114
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 128 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 186
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 187 VDIWSLGCIFAEMVT 201
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 67 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 113
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 187
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 188 VDIWSLGCIFAEMVT 202
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 68 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 114
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV---MGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+++M + DFG A+ L E+ +GT YV+PE
Sbjct: 158 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 217
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G ++ ++ GL P
Sbjct: 218 SDLWALGCIIYQLVAGLPP 236
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR---FIG 369
++ AL+YLH I H +LKP N+LL+++M + DF A+ L +Q R F+G
Sbjct: 143 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSG 262
IG G FG V+ G + G +AVK+F+ R + ++E + +RH NI+ F A
Sbjct: 11 IGKGRFGEVWRGK-WRGEEVAVKIFSS-REERSWFREAEIYQTVMLRHENILG-FIAADN 67
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLH 322
D +V + +GSL ++L+ + ++ + +A+ A L +LH
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYLN----------RYTVTVEGMIKLALSTASGLAHLH 117
Query: 323 CDC-----QPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ +P IAH +LK N+L+ + D +A
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-----MGTIGYVAPEYGMGS--- 52
H DLK N+ + T + D G+A T ID+ +GT Y+APE S
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 190
Query: 53 ---EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLP 88
E D+Y+ G++ E+ R + G +D LP
Sbjct: 191 KHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLP 227
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 127 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 185
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 186 VDIWSLGCIFAEMVT 200
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 66 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 112
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 130 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 188
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 189 VDIWSLGCIFAEMVT 203
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 69 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 115
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 116 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPE-----YGMGSEVS 55
H DLKP NV LD M A + DFG++ + G+ Y APE G EV
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEV- 197
Query: 56 SYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
D++S G++L + G P F DD ++P L K
Sbjct: 198 ---DIWSSGVILYALLCGTLP----FDDD-HVPTLFK 226
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 200 ANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGARSF------KSECKAAINIRHRN 252
+ +G G FG V G G +AVK+ N + RS + E + RH +
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQK---IRSLDVVGKIRREIQNLKLFRHPH 77
Query: 253 IVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDI 310
I++++ +S +V +++ G L +++ +G+ D K+ +
Sbjct: 78 IIKLYQVIST-----PSDIFMVMEYVSGGELFDYICKNGRLDE-----------KESRRL 121
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPD 360
+ + Y H + + H +LKP NVLLD M + DF ++ + D
Sbjct: 122 FQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSG 262
IG G FG V+ G + G +AVK+F+ R + ++E + +RH NI+ F A
Sbjct: 12 IGKGRFGEVWRGK-WRGEEVAVKIFSS-REERSWFREAEIYQTVMLRHENILG-FIAADN 68
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLH 322
D +V + +GSL ++L+ + ++ + +A+ A L +LH
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSLFDYLN----------RYTVTVEGMIKLALSTASGLAHLH 118
Query: 323 CDC-----QPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ +P IAH +LK N+L+ + D +A
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-----MGTIGYVAPEYGMGS--- 52
H DLK N+ + T + D G+A T ID+ +GT Y+APE S
Sbjct: 132 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 191
Query: 53 ---EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLP 88
E D+Y+ G++ E+ R + G +D LP
Sbjct: 192 KHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLP 228
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 27/171 (15%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFK-SECKAAINIRHRNIVRVFTAVS 261
IG G +G V+ G + G +AVKVF A F+ +E + +RH NI+ A
Sbjct: 45 IGKGRYGEVWMGK-WRGEKVAVKVFFTTEE--ASWFRETEIYQTVLMRHENILGFIAA-- 99
Query: 262 GVDYQGARFKAVVY---KFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARAL 318
D +G +Y + NGSL ++L D K L +A L
Sbjct: 100 --DIKGTGSWTQLYLITDYHENGSLYDYLKST--------TLD--AKSMLKLAYSSVSGL 147
Query: 319 KYLHCDC-----QPRIAHCNLKPSNVLLDDEMIGHVGDFSMA-RFLPDTDE 363
+LH + +P IAH +LK N+L+ + D +A +F+ DT+E
Sbjct: 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE 198
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-----MGTIGYVAPEYGMGS--- 52
H DLK N+ + T + D G+A +T+ +D+ +GT Y+ PE S
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNR 224
Query: 53 -EVSSY--GDVYSFGILLLEMFTGLRPNNGMFKDDLNLP 88
SY D+YSFG++L E+ R +G ++ LP
Sbjct: 225 NHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQLP 261
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 187
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 188 VDIWSLGCIFAEMVT 202
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L+ ++ T L LIK L
Sbjct: 68 VKLLDVIHTENKL-----YLVFEFL-HQDLKTFMDASALTGIPLP----LIKSYL---FQ 114
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 128 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 186
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 187 VDIWSLGCIFAEMVT 201
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 67 VKLLDVIHTENKL-----YLVFEFL-SMDLKDFMDASALTGIPLP----LIKSYL---FQ 113
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 127 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 185
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 186 VDIWSLGCIFAEMVT 200
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 66 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 112
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-----GTIGYVAPEYGMGSEVSSY 57
DLK N+ LD + + DFG+ + E D GT Y+APE +G + +
Sbjct: 143 DLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHS 198
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDL 85
D +SFG+LL EM G P +G +++L
Sbjct: 199 VDWWSFGVLLYEMLIGQSPFHGQDEEEL 226
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 128 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 186
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 187 VDIWSLGCIFAEMVT 201
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 67 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 113
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 184 VDIWSLGCIFAEMVT 198
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 64 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 110
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 184 VDIWSLGCIFAEMVT 198
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + F+ V + L+ ++ T L LIK L
Sbjct: 64 VKLLDVIHTENKLYLVFEHV------HQDLKTFMDASALTGIPLP----LIKSYL---FQ 110
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 25/193 (12%)
Query: 201 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGA----RSFKSECKAAINIRHRNIVR 255
+IGAG FG V +G L G ++ G R F SE H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
+ V+ + ++ +FM NGSL+ +L D F + + + + +A
Sbjct: 73 LEGVVTK-----STPVMIITEFMENGSLDSFLRQNDG--------QFTVIQLVGMLRGIA 119
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI----GKL 371
+KYL H L N+L++ ++ V DF ++RFL D + GK+
Sbjct: 120 AGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 176
Query: 372 NVRNFVKMALSQR 384
+R A+ R
Sbjct: 177 PIRWTAPEAIQYR 189
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL------PVETSFIDVMGTIGYVAPEYGMGSEV 54
H L N+ ++ + + DFG++RFL P TS + I + APE +
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 191
Query: 55 SSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+S DV+S+GI++ E+ + G RP M D+
Sbjct: 192 TSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 223
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 127 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 185
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 186 VDIWSLGCIFAEMVT 200
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 66 VKLLDVIHTENKL-----YLVFEFL-SMDLKKFMDASALTGIPLP----LIKSYL---FQ 112
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 187
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 188 VDIWSLGCIFAEMVT 202
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 68 VKLLDVIHTENKL-----YLVFEFL-SMDLKDFMDASALTGIPLP----LIKSYL---FQ 114
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 65 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 111
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 184 VDIWSLGCIFAEMVT 198
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 64 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 110
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 65 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 111
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 112 LLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 130 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 188
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 189 VDIWSLGCIFAEMVT 203
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAI 246
L D N F IG G +G VY G +A+K L G + E
Sbjct: 3 LVDMEN-FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 247 NIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKK 306
+ H NIV++ + + +V++F+ + L++++ T L LIK
Sbjct: 62 ELNHPNIVKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKS 111
Query: 307 KLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
L + + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 112 YL---FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KPSN+ ++ L DFG++ L +++ +GT Y++PE G+ S D+
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 61 YSFGILLLEMFTGLRP 76
+S G+ L+EM G P
Sbjct: 187 WSMGLSLVEMAVGRYP 202
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 197 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSFKSECKAAIN---IRHRN 252
F + +GAGN G V+ + G +A K+ +L E K AI IR
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRELQ 56
Query: 253 IVRVFTAVSGVDYQGARFK----AVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
++ + V + GA + ++ + M GSL++ L ++L
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--------- 107
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI 368
++I V + L YL + +I H ++KPSN+L++ + DF ++ L D+ + F+
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FV 164
Query: 369 G 369
G
Sbjct: 165 G 165
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 127 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 185
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 186 VDIWSLGCIFAEMVT 200
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 66 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 112
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 129 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 187
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 188 VDIWSLGCIFAEMVT 202
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 68 VKLLDVIHTENKL-----YLVFEFL-SMDLKKFMDASALTGIPLP----LIKSYL---FQ 114
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 126 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 65 VKLLDVIHTENKL-----YLVFEFL-HQDLKDFMDASALTGIPLP----LIKSYL---FQ 111
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 133 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTA 191
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 192 VDIWSLGCIFAEMVT 206
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 72 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 118
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 119 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 65 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 111
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSG 262
IG G FG V+ G + G +AVK+F+ R + ++E + +RH NI+ F A
Sbjct: 17 IGKGRFGEVWRGK-WRGEEVAVKIFSS-REERSWFREAEIYQTVMLRHENILG-FIAADN 73
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLH 322
D +V + +GSL ++L+ + ++ + +A+ A L +LH
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSLFDYLN----------RYTVTVEGMIKLALSTASGLAHLH 123
Query: 323 CDC-----QPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ +P IAH +LK N+L+ + D +A
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-----MGTIGYVAPEYGMGS--- 52
H DLK N+ + T + D G+A T ID+ +GT Y+APE S
Sbjct: 137 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 196
Query: 53 ---EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLP 88
E D+Y+ G++ E+ R + G +D LP
Sbjct: 197 KHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLP 233
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KPSN+ ++ L DFG++ L +++ +GT Y++PE G+ S D+
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 61 YSFGILLLEMFTGLRP 76
+S G+ L+EM G P
Sbjct: 187 WSMGLSLVEMAVGRYP 202
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 197 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSFKSECKAAIN---IRHRN 252
F + +GAGN G V+ + G +A K+ +L E K AI IR
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRELQ 56
Query: 253 IVRVFTAVSGVDYQGARFK----AVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
++ + V + GA + ++ + M GSL++ L ++L
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--------- 107
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI 368
++I V + L YL + +I H ++KPSN+L++ + DF ++ L D+ + F+
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FV 164
Query: 369 G 369
G
Sbjct: 165 G 165
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+ L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 65 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 111
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 184 VDIWSLGCIFAEMVT 198
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+ L G + E + H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 64 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 110
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSG 262
IG G FG V+ G + G +AVK+F+ R + ++E + +RH NI+ F A
Sbjct: 14 IGKGRFGEVWRGK-WRGEEVAVKIFSS-REERSWFREAEIYQTVMLRHENILG-FIAADN 70
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLH 322
D +V + +GSL ++L+ + ++ + +A+ A L +LH
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFDYLN----------RYTVTVEGMIKLALSTASGLAHLH 120
Query: 323 CDC-----QPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ +P IAH +LK N+L+ + D +A
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-----MGTIGYVAPEYGMGS--- 52
H DLK N+ + T + D G+A T ID+ +GT Y+APE S
Sbjct: 134 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 193
Query: 53 ---EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLP 88
E D+Y+ G++ E+ R + G +D LP
Sbjct: 194 KHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLP 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KPSN+ ++ L DFG++ L +++ +GT Y++PE G+ S D+
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 61 YSFGILLLEMFTGLRP 76
+S G+ L+EM G P
Sbjct: 187 WSMGLSLVEMAVGRYP 202
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 197 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSFKSECKAAIN---IRHRN 252
F + +GAGN G V+ + G +A K+ +L E K AI IR
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRELQ 56
Query: 253 IVRVFTAVSGVDYQGARFK----AVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
++ + V + GA + ++ + M GSL++ L ++L
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--------- 107
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI 368
++I V + L YL + +I H ++KPSN+L++ + DF ++ L D+ + F+
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FV 164
Query: 369 G 369
G
Sbjct: 165 G 165
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KPSN+ ++ L DFG++ L +++ +GT Y++PE G+ S D+
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 61 YSFGILLLEMFTGLRP 76
+S G+ L+EM G P
Sbjct: 187 WSMGLSLVEMAVGRYP 202
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 197 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSFKSECKAAIN---IRHRN 252
F + +GAGN G V+ + G +A K+ +L E K AI IR
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRELQ 56
Query: 253 IVRVFTAVSGVDYQGARFK----AVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
++ + V + GA + ++ + M GSL++ L ++L
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--------- 107
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI 368
++I V + L YL + +I H ++KPSN+L++ + DF ++ L D+ + F+
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FV 164
Query: 369 G 369
G
Sbjct: 165 G 165
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA-RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H D+K +NV L ++ L DFG+A + + +GT ++APE S S D
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKAD 202
Query: 60 VYSFGILLLEMFTGLRPNNGM 80
++S GI +E+ G PN+ M
Sbjct: 203 IWSLGITAIELAKGEPPNSDM 223
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 19/183 (10%)
Query: 189 DLYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINI 248
++ D F+ IG G+FG V+ G D T V +I A + + I +
Sbjct: 17 NIADPEELFTKLERIGKGSFGEVFKG--IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITV 74
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD-FLIKKK 307
+ T G +G++ ++ +++ GS + L R FD F I
Sbjct: 75 LSQCDSSYVTKYYGSYLKGSKL-WIIMEYLGGGSALDLL--------RAGPFDEFQIATM 125
Query: 308 LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD-EQTR 366
L ++ + L YLH + + H ++K +NVLL ++ + DF +A L DT ++
Sbjct: 126 LK---EILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 179
Query: 367 FIG 369
F+G
Sbjct: 180 FVG 182
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE--TSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H D+KP N+ + + A+L DFGIA E T + +GT+ Y APE S +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 59 DVYSFGILLLEMFTGLRPNNG 79
D+Y+ +L E TG P G
Sbjct: 217 DIYALTCVLYECLTGSPPYQG 237
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIV 254
F +G G FG V+ D A+K L AR E KA + H IV
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 255 RVFTAV----SGVDYQGARFKAVVYKFMP---NGSLEEWLHGKDDTHWRLLNFDFLIKKK 307
R F A + Q + K +Y M +L++W++G+ R +
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV------C 120
Query: 308 LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL-PDTDEQT 365
L I + +A A+++LH + H +LKPSN+ + + VGDF + + D +EQT
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF-------------LPVETSFIDVMGTIGYVAPE 47
H DLKPSN+F + +GDFG+ +P +GT Y++PE
Sbjct: 141 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE 200
Query: 48 YGMGSEVSSYGDVYSFGILLLEMF 71
G+ S D++S G++L E+
Sbjct: 201 QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 201 NLIGAGNFGSVYNGTLF-DGTTIAVKV-FNLIR-PGGARSFKS---ECKAAINIRHRNIV 254
++G+G FG+V+ G +G +I + V +I G +SF++ A ++ H +IV
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 255 RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDV 314
R+ G Q +V +++P GSL + + H L L L+ + +
Sbjct: 97 RLLGLCPGSSLQ------LVTQYLPLGSLLDHVR----QHRGALGPQLL----LNWGVQI 142
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRF 367
A+ + YL + + H NL NVLL V DF +A LP D+Q +
Sbjct: 143 AKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 192
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETS---FIDVMGTIGYVAPEYGMGSEVSSY 57
H +L NV L + DFG+A LP + + + I ++A E + +
Sbjct: 156 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQ 215
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+S+G+ + E+ T G P G+
Sbjct: 216 SDVWSYGVTVWELMTFGAEPYAGL 239
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ E L DFG+AR +PV T +V+ T+ Y APE +G + S
Sbjct: 133 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 191
Query: 59 -DVYSFGILLLEMFT 72
D++S G + EM T
Sbjct: 192 VDIWSLGCIFAEMVT 206
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGARSFKSECKAAINIRHRNI 253
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
V++ + + +V++F+ + L++++ T L LIK L
Sbjct: 72 VKLLDVIHTENKL-----YLVFEFL-HQDLKKFMDASALTGIPLP----LIKSYL---FQ 118
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ + L + H R+ H +LKP N+L++ E + DF +AR
Sbjct: 119 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 201 NLIGAGNFGSVYNGTLF-DGTTIAVKV-FNLIR-PGGARSFKS---ECKAAINIRHRNIV 254
++G+G FG+V+ G +G +I + V +I G +SF++ A ++ H +IV
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 255 RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDV 314
R+ G Q +V +++P GSL + + H L L L+ + +
Sbjct: 79 RLLGLCPGSSLQ------LVTQYLPLGSLLDHVR----QHRGALGPQLL----LNWGVQI 124
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRF 367
A+ + YL + + H NL NVLL V DF +A LP D+Q +
Sbjct: 125 AKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 174
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETS---FIDVMGTIGYVAPEYGMGSEVSSY 57
H +L NV L + DFG+A LP + + + I ++A E + +
Sbjct: 138 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQ 197
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+S+G+ + E+ T G P G+
Sbjct: 198 SDVWSYGVTVWELMTFGAEPYAGL 221
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV----MGTIGYVAPEYGMGSEVSS 56
H DL N+ ++ E + DFG+A+ LP++ V I + APE + S
Sbjct: 134 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSR 193
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 194 QSDVWSFGVVLYELFT 209
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 203 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G GNFGSV Y+ L D G +AVK P R F+ E + + IV+
Sbjct: 15 LGKGNFGSVELCRYD-PLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 257 FTAVSGVDYQGARFK-AVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
GV Y R + +V +++P+G L ++L H L+ L L + +
Sbjct: 74 ----RGVSYGPGRPELRLVMEYLPSGCLRDFLQ----RHRARLDASRL----LLYSSQIC 121
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLP 359
+ ++YL R H +L N+L++ E + DF +A+ LP
Sbjct: 122 KGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 162
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSF-IDVMGTIGYVAPEYGMGSEVSSYGD 59
H DLK N+FL+D+M +GDFG+A + + D+ GT Y+APE S D
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVD 224
Query: 60 VYSFGILLLEMFTGLRP 76
++S G +L + G P
Sbjct: 225 IWSLGCILYTLLVGKPP 241
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ ++YLH + R+ H +LK N+ L+D+M +GDF +A
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSF-IDVMGTIGYVAPEYGMGSEVSSYGD 59
H DLK N+FL+D+M +GDFG+A + + D+ GT Y+APE S D
Sbjct: 149 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVD 208
Query: 60 VYSFGILLLEMFTGLRP 76
++S G +L + G P
Sbjct: 209 IWSLGCILYTLLVGKPP 225
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ ++YLH + R+ H +LK N+ L+D+M +GDF +A
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 203 IGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRVFTAV 260
IG GNFG V++G L D T +AVK P ++ F E + H NIVR+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI--- 178
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKD-DTHWRLLNFDFLIKKKLDIAIDVARALK 319
GV Q K +Y M E + G D T R +K L + D A ++
Sbjct: 179 -GVCTQ----KQPIYIVM------ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGME 227
Query: 320 YLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
YL C H +L N L+ ++ + + DF M+R
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG------TIGYVAPEYGMGSEV 54
H DL N + ++ + DFG++R E + + + APE
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 55 SSYGDVYSFGILLLEMFT 72
SS DV+SFGILL E F+
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 33/179 (18%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGA-------RSFKSECKA 244
A N IG G FG V+ G L D + +A+K L G + F+ E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 245 AINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLI 304
N+ H NIV+++ G+ + R +V +F+P G D + RLL+ I
Sbjct: 77 MSNLNHPNIVKLY----GLMHNPPR---MVMEFVPCG----------DLYHRLLDKAHPI 119
Query: 305 KK--KLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLD--DE---MIGHVGDFSMAR 356
K KL + +D+A ++Y+ + P I H +L+ N+ L DE + V DF +++
Sbjct: 120 KWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 1 HCDLKPSNVFLD--DE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVS 55
H DL+ N+FL DE + A + DFG+++ S ++G ++APE +G+E
Sbjct: 147 HRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPE-TIGAEEE 203
Query: 56 SY---GDVYSFGILLLEMFTGLRP 76
SY D YSF ++L + TG P
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGP 227
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 24/171 (14%)
Query: 203 IGAGNFGSV----YNGTLFDGTTIAVKVFNLIRPGGAR---SFKSECKAAINIRHRNIVR 255
+G G+FG V Y+ T DGT V V L G + +K E + H +I++
Sbjct: 39 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
GA +V +++P GSL ++L +LL F A +
Sbjct: 98 YKGCCEDA---GAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF----------AQQIC 144
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ YLH H +L NVLLD++ + +GDF +A+ +P+ E R
Sbjct: 145 EGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYR 192
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV LD++ +GDFG+A+ +P V + + APE +
Sbjct: 157 HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYY 216
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG+ L E+ T
Sbjct: 217 ASDVWSFGVTLYELLT 232
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 203 IGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRVFTAV 260
IG GNFG V++G L D T +AVK P ++ F E + H NIVR+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI--- 178
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDD-THWRLLNFDFLIKKKLDIAIDVARALK 319
GV Q K +Y M E + G D T R +K L + D A ++
Sbjct: 179 -GVCTQ----KQPIYIVM------ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGME 227
Query: 320 YLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
YL C H +L N L+ ++ + + DF M+R
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + ++ + DFG++R + + G + + APE SS
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFGILL E F+
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPE-----YGMGSEVS 55
H DLKP NV LD M A + DFG++ + G+ Y APE G EV
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEV- 192
Query: 56 SYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
D++S G++L + G P DD ++P L K
Sbjct: 193 ---DIWSCGVILYALLCGTLPF-----DDEHVPTLFK 221
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 35/174 (20%)
Query: 200 ANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSF------KSECKAAINIRHRN 252
+ +G G FG V G G +AVK+ N + RS K E + RH +
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK---IRSLDVVGKIKREIQNLKLFRHPH 72
Query: 253 IVRVFTAVSG-VDYQGARFKAVVYKFMPNGSLEEWL--HGK-DDTHWRLLNFDFLIKKKL 308
I++++ +S D+ +V +++ G L +++ HG+ ++ R L L
Sbjct: 73 IIKLYQVISTPTDF------FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL----- 121
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A+ Y H + + H +LKP NVLLD M + DF ++ + D +
Sbjct: 122 -------SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV L + A + DFG+++ L + ++ + + APE + SS
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 199
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFG+L+ E F+ G +P GM
Sbjct: 200 KSDVWSFGVLMWEAFSYGQKPYRGM 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLD---DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L + + D G A+ L + +GT+ Y+APE + +
Sbjct: 144 HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT 203
Query: 58 GDVYSFGILLLEMFTGLRP 76
D +SFG L E TG RP
Sbjct: 204 VDYWSFGTLAFECITGFRP 222
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 203 IGAGNFGSVYNGTLFD-GTTIAVK-VFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V D G +A+K + P + E + + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 261 SGVDYQGAR-FKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAI-DVARAL 318
G+ + ++ G L ++L+ + N L + + + D++ AL
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLN-------QFENCCGLKEGPIRTLLSDISSAL 134
Query: 319 KYLHCDCQPRIAHCNLKPSNVLLD---DEMIGHVGDFSMARFLPDTDEQTRFIGKLN 372
+YLH + RI H +LKP N++L +I + D A+ L + T F+G L
Sbjct: 135 RYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQ 188
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLD---DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L + + D G A+ L + +GT+ Y+APE + +
Sbjct: 145 HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT 204
Query: 58 GDVYSFGILLLEMFTGLRP 76
D +SFG L E TG RP
Sbjct: 205 VDYWSFGTLAFECITGFRP 223
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 203 IGAGNFGSVYNGTLFD-GTTIAVK-VFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAV 260
+G G FG V D G +A+K + P + E + + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 261 SGVDYQGAR-FKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAI-DVARAL 318
G+ + ++ G L ++L+ + N L + + + D++ AL
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLN-------QFENCCGLKEGPIRTLLSDISSAL 135
Query: 319 KYLHCDCQPRIAHCNLKPSNVLLD---DEMIGHVGDFSMARFLPDTDEQTRFIGKLN 372
+YLH + RI H +LKP N++L +I + D A+ L + T F+G L
Sbjct: 136 RYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQ 189
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV L + A + DFG+++ L + ++ + + APE + SS
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 189
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFG+L+ E F+ G +P GM
Sbjct: 190 KSDVWSFGVLMWEAFSYGQKPYRGM 214
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV L + A + DFG+++ L + ++ + + APE + SS
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFG+L+ E F+ G +P GM
Sbjct: 210 KSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV L + A + DFG+++ L + ++ + + APE + SS
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFG+L+ E F+ G +P GM
Sbjct: 210 KSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV L + A + DFG+++ L + ++ + + APE + SS
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 207
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFG+L+ E F+ G +P GM
Sbjct: 208 KSDVWSFGVLMWEAFSYGQKPYRGM 232
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGS-EVSSY 57
H DLKP N+ ++ E + DFG+AR +PV +V+ T+ Y AP+ MGS + S+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTT 181
Query: 58 GDVYSFGILLLEMFTG 73
D++S G + EM G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 64/167 (38%), Gaps = 41/167 (24%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRP--GGARSFKSECKAAINIRHRNIVRVFTAV 260
IG G +G VY G T A+K L + G + E ++H NIV+++ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI---AIDVARA 317
H K + D +KK LD+ ++ A
Sbjct: 70 ---------------------------HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTA 102
Query: 318 LKYL--------HCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+L +C + R+ H +LKP N+L++ E + DF +AR
Sbjct: 103 KSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV L + A + DFG+++ L + ++ + + APE + SS
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 187
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFG+L+ E F+ G +P GM
Sbjct: 188 KSDVWSFGVLMWEAFSYGQKPYRGM 212
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGS-EVSSY 57
H DLKP N+ ++ E + DFG+AR +PV +V+ T+ Y AP+ MGS + S+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTT 181
Query: 58 GDVYSFGILLLEMFTG 73
D++S G + EM G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 64/167 (38%), Gaps = 41/167 (24%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRP--GGARSFKSECKAAINIRHRNIVRVFTAV 260
IG G +G VY G T A+K L + G + E ++H NIV+++ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI---AIDVARA 317
H K + D +KK LD+ ++ A
Sbjct: 70 ---------------------------HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTA 102
Query: 318 LKYL--------HCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+L +C + R+ H +LKP N+L++ E + DF +AR
Sbjct: 103 KSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV L + A + DFG+++ L + ++ + + APE + SS
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFG+L+ E F+ G +P GM
Sbjct: 194 KSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ L+++ + + DFG++ F + D +GT Y+APE + + +
Sbjct: 169 HRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEK 227
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDL 85
DV+S G+++ + G P G D+
Sbjct: 228 CDVWSCGVIMYILLCGYPPFGGQNDQDI 255
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL--PVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N ++D+ + DFG++R++ ETS + + + PE M S+ SS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 59 DVYSFGILLLEMFT 72
D+++FG+L+ E+++
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 187 PVDVWSCGIVLTAMLAGELP 206
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSG 262
+G G +G V+ G L+ G ++AVK+F+ R + ++E + +RH NI+ F A
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFS-SRDEQSWFRETEIYNTVLLRHDNILG-FIASDM 72
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD------IAIDVAR 316
+ ++ + +GSL +DFL ++ L+ +A+ A
Sbjct: 73 TSRNSSTQLWLITHYHEHGSL----------------YDFLQRQTLEPHLALRLAVSAAC 116
Query: 317 ALKYLHCDC-----QPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
L +LH + +P IAH + K NVL+ + + D +A
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA 160
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-----MGTIGYVAPEYGMGSEVS 55
H D K NV + + + D G+A + ++D+ +GT Y+APE + ++
Sbjct: 136 HRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEV-LDEQIR 194
Query: 56 S-------YGDVYSFGILLLEM 70
+ + D+++FG++L E+
Sbjct: 195 TDCFESYKWTDIWAFGLVLWEI 216
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 187 PVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 187 PVDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 188 PVDVWSCGIVLTAMLAGELP 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 187 PVDVWSCGIVLTAMLAGELP 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 187 PVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 187 PVDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 186 PVDVWSCGIVLTAMLAGELP 205
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV L + A + DFG+++ L + ++ + + APE + SS
Sbjct: 492 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 551
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFG+L+ E F+ G +P GM
Sbjct: 552 KSDVWSFGVLMWEAFSYGQKPYRGM 576
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGS-EVSSY 57
H DLKP N+ ++ E + DFG+AR +PV +++ T+ Y AP+ MGS + S+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTT 181
Query: 58 GDVYSFGILLLEMFTG 73
D++S G + EM G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 64/167 (38%), Gaps = 41/167 (24%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRP--GGARSFKSECKAAINIRHRNIVRVFTAV 260
IG G +G VY G T A+K L + G + E ++H NIV+++ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI---AIDVARA 317
H K + D +KK LD+ ++ A
Sbjct: 70 ---------------------------HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTA 102
Query: 318 LKYL--------HCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+L +C + R+ H +LKP N+L++ E + DF +AR
Sbjct: 103 KSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 187 PVDVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 188 PVDVWSCGIVLTAMLAGELP 207
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV L + A + DFG+++ L + ++ + + APE + SS
Sbjct: 493 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 552
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFG+L+ E F+ G +P GM
Sbjct: 553 KSDVWSFGVLMWEAFSYGQKPYRGM 577
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 187 PVDVWSCGIVLTAMLAGELP 206
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEMFTG 73
+S G+++ EM G
Sbjct: 209 WSVGVIMGEMIKG 221
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 17/90 (18%)
Query: 277 FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR----------ALKYLHCDCQ 326
F P SLEE+ D + + D + + + + +D R +K+LH
Sbjct: 92 FTPQKSLEEF----QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG- 146
Query: 327 PRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
I H +LKPSN+++ + + DF +AR
Sbjct: 147 --IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 187 PVDVWSCGIVLTAMLAGELP 206
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEMFTG 73
+S G+++ EM G
Sbjct: 209 WSVGVIMGEMIKG 221
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 36/176 (20%)
Query: 207 NFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---T 258
NF SV G D T +K + ++P G+ + C A I RN+ R F T
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 259 AVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+ K V +K F P SLEE+ D + + D + + + +
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLSQVIQM 121
Query: 311 AIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 122 ELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 187 PVDVWSCGIVLTAMLAGELP 206
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H DLKP N+ L T + DFG A ++T + G+ ++APE GS S D
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTA--CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 60 VYSFGILLLEMFTGLRP 76
V+S+GI+L E+ T +P
Sbjct: 186 VFSWGIILWEVITRRKP 202
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 22/143 (15%)
Query: 202 LIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVS 261
++G G FG V + +A+K + ++F E + + H NIV+++
Sbjct: 15 VVGRGAFGVVCKAK-WRAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLY---- 67
Query: 262 GVDYQGARFKAV--VYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALK 319
GA V V ++ GSL LHG + + + + + ++ +
Sbjct: 68 -----GACLNPVCLVMEYAEGGSLYNVLHGAEPLPY------YTAAHAMSWCLQCSQGVA 116
Query: 320 YLHCDCQPR-IAHCNLKPSNVLL 341
YLH QP+ + H +LKP N+LL
Sbjct: 117 YLH-SMQPKALIHRDLKPPNLLL 138
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 33/222 (14%)
Query: 156 INDVESRLRSIKMKLLKTPVYEEKQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGT 215
++ E + ++ +++ P Y ++++ +D+ +G G FG V+
Sbjct: 9 LSPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWE-------LGEGAFGKVFLAE 61
Query: 216 LF------DGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGAR 269
D +AVK + F+ E + ++H++IVR F GV +G R
Sbjct: 62 CHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFF----GVCTEG-R 116
Query: 270 FKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFD-------FLIKKKLDIAIDVARALKY 320
+V+++M +G L +L HG D +LL + + L +A VA + Y
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDA---KLLAGGEDVAPGPLGLGQLLAVASQVAAGMVY 173
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
L H +L N L+ ++ +GDF M+R + TD
Sbjct: 174 L---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + + +GDFG++R + T + V G I ++ PE + + ++
Sbjct: 181 HRDLATRNCLVGQGLVVKIGDFGMSRDI-YSTDYYRVGGRTMLPIRWMPPESILYRKFTT 239
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 240 ESDVWSFGVVLWEIFT 255
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 188 PVDVWSCGIVLTAMLAGELP 207
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGA-------RSFKSECKA 244
A N IG G FG V+ G L D + +A+K L G + F+ E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 245 AINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLI 304
N+ H NIV+++ G+ + R +V +F+P G D + RLL+ I
Sbjct: 77 MSNLNHPNIVKLY----GLMHNPPR---MVMEFVPCG----------DLYHRLLDKAHPI 119
Query: 305 KK--KLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLD--DE---MIGHVGDFSMAR 356
K KL + +D+A ++Y+ + P I H +L+ N+ L DE + V DF ++
Sbjct: 120 KWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 1 HCDLKPSNVFLD--DE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVS 55
H DL+ N+FL DE + A + DFG ++ S ++G ++APE +G+E
Sbjct: 147 HRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAPE-TIGAEEE 203
Query: 56 SY---GDVYSFGILLLEMFTGLRP 76
SY D YSF ++L + TG P
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGP 227
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H DLKP N+ L T + DFG A ++T + G+ ++APE GS S D
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTA--CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 186
Query: 60 VYSFGILLLEMFTGLRP 76
V+S+GI+L E+ T +P
Sbjct: 187 VFSWGIILWEVITRRKP 203
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 22/143 (15%)
Query: 202 LIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVS 261
++G G FG V + +A+K + ++F E + + H NIV+++
Sbjct: 16 VVGRGAFGVVCKAK-WRAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLY---- 68
Query: 262 GVDYQGARFKAV--VYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALK 319
GA V V ++ GSL LHG + + + + + ++ +
Sbjct: 69 -----GACLNPVCLVMEYAEGGSLYNVLHGAEPLPY------YTAAHAMSWCLQCSQGVA 117
Query: 320 YLHCDCQPR-IAHCNLKPSNVLL 341
YLH QP+ + H +LKP N+LL
Sbjct: 118 YLH-SMQPKALIHRDLKPPNLLL 139
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 187 PVDVWSCGIVLTAMLAGELP 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 202 LIGAGNFGSVYNGTL-FDG---TTIAVKVFNL-IRPGGARSFKSECKAAINIRHRNIVRV 256
+IGAG FG V +G L G +A+K + R F E H N+V +
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
GV +G +V +FM NG+L+ +L D F + + + + +A
Sbjct: 110 ----EGVVTRGKPV-MIVIEFMENGALDAFLRKHDG--------QFTVIQLVGMLRGIAA 156
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ--TRFIGKLNVR 374
++YL H +L N+L++ ++ V DF ++R + D E T GK+ VR
Sbjct: 157 GMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR 213
Query: 375 NFVKMALSQR 384
A+ R
Sbjct: 214 WTAPEAIQYR 223
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R + E + G I + APE + +S
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTS 227
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI++ E+ + G RP M D+
Sbjct: 228 ASDVWSYGIVMWEVMSYGERPYWDMSNQDV 257
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 188 PVDVWSCGIVLTAMLAGELP 207
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 17/88 (19%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP---------VETSFIDVMGTIGYVAPEYGMG 51
H D+K N+ L ++ + + DFG++ FL V +F+ GT ++APE +
Sbjct: 144 HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV---GTPCWMAPE--VM 198
Query: 52 SEVSSY---GDVYSFGILLLEMFTGLRP 76
+V Y D++SFGI +E+ TG P
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATGAAP 226
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+V L+YLH + Q H ++K N+LL ++ + DF ++ FL + TR
Sbjct: 129 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 188 PVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 188 PVDVWSCGIVLTAMLAGELP 207
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N +D ++ + DFG+ R++ ++ ++ +GT + + APE + SS
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185
Query: 58 GDVYSFGILLLEMFT 72
DV++FGIL+ E+F+
Sbjct: 186 SDVWAFGILMWEVFS 200
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 26/171 (15%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARS--FKSECKAAINIRHRNIVRVFTAV 260
+G+G FG V G +AVK +I+ G F E + + + H +V+ F V
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVK---MIKEGSMSEDEFFQEAQTMMKLSHPKLVK-FYGV 71
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAIDVARAL 318
+Y +V +++ NG L +L HGK +LL ++ DV +
Sbjct: 72 CSKEYP----IYIVTEYISNGCLLNYLRSHGKGLEPSQLL----------EMCYDVCEGM 117
Query: 319 KYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
+L + H +L N L+D ++ V DF M R++ D D+ +G
Sbjct: 118 AFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVG 164
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGD 59
H DLK N+FL+D+M +GDFG+A + + + GT Y+APE S D
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVD 224
Query: 60 VYSFGILLLEMFTGLRP 76
++S G +L + G P
Sbjct: 225 IWSLGCILYTLLVGKPP 241
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ ++YLH + R+ H +LK N+ L+D+M +GDF +A
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 188 PVDVWSCGIVLTAMLAGELP 207
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 26/182 (14%)
Query: 184 NLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECK 243
+L ++LY + + G FG V+ L + +AVK+F I+ + + E
Sbjct: 13 DLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLN-EYVAVKIFP-IQDKQSWQNEYEVY 70
Query: 244 AAINIRHRNIVRVFTAVSGVDYQGARFKA---VVYKFMPNGSLEEWLHGKDDTHWRLLNF 300
+ ++H NI++ G + +G ++ F GSL ++L + W L
Sbjct: 71 SLPGMKHENILQFI----GAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-NVVSWNEL-- 123
Query: 301 DFLIKKKLDIAIDVARALKYLHCDC-------QPRIAHCNLKPSNVLLDDEMIGHVGDFS 353
IA +AR L YLH D +P I+H ++K NVLL + + + DF
Sbjct: 124 -------CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176
Query: 354 MA 355
+A
Sbjct: 177 LA 178
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIG---YVAPEYGMGS----- 52
H D+K NV L + +TA + DFG+A S D G +G Y+APE G+
Sbjct: 154 HRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQR 213
Query: 53 EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLP 88
+ D+Y+ G++L E+ + +G D+ LP
Sbjct: 214 DAFLRIDMYAMGLVLWELASRCTAADGPV-DEYMLP 248
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 188 PVDVWSCGIVLTAMLAGELP 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 202 LIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGA----RSFKSECKAAINIRHRNIVRV 256
+IG G FG V +G L G ++ G R F SE H NI+ +
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
V+ + ++ ++M NGSL+ +L K+D + ++ +++ +
Sbjct: 81 EGVVTK-----CKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLR-------GIGS 127
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ--TRFIGKLNVR 374
+KYL H +L N+L++ ++ V DF M+R L D E T GK+ +R
Sbjct: 128 GMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 184
Query: 375 NFVKMALSQR 384
A++ R
Sbjct: 185 WTAPEAIAYR 194
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + APE + +S
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 198
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI++ E+ + G RP M D+
Sbjct: 199 ASDVWSYGIVMWEVMSYGERPYWDMSNQDV 228
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + + T Y APE +G D+
Sbjct: 151 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDI 210
Query: 61 YSFGILLLEMFTG 73
+S G ++ EM G
Sbjct: 211 WSVGCIMGEMIKG 223
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 36/176 (20%)
Query: 207 NFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---T 258
NF SV G D T +K + ++P G+ + C A I RN+ R F T
Sbjct: 11 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 67
Query: 259 AVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+ K V +K F P SLEE+ D + + D + + + +
Sbjct: 68 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQM 123
Query: 311 AIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 124 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA---RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ LD+ + DFG+A R+ E + GT+ YVAPE E +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 58 G-DVYSFGILLLEMFTGLRP 76
DV+S GI+L M G P
Sbjct: 187 PVDVWSCGIVLTAMLAGELP 206
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 202 LIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGA----RSFKSECKAAINIRHRNIVRV 256
+IG G FG V +G L G ++ G R F SE H NI+ +
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
V+ + ++ ++M NGSL+ +L K+D + ++ +++ +
Sbjct: 75 EGVVTK-----CKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLR-------GIGS 121
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ--TRFIGKLNVR 374
+KYL H +L N+L++ ++ V DF M+R L D E T GK+ +R
Sbjct: 122 GMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 178
Query: 375 NFVKMALSQR 384
A++ R
Sbjct: 179 WTAPEAIAYR 188
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + APE + +S
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 192
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI++ E+ + G RP M D+
Sbjct: 193 ASDVWSYGIVMWEVMSYGERPYWDMSNQDV 222
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDD---EMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+ + + DFG++ D +GT Y+APE G+
Sbjct: 155 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEK 213
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDL 85
DV+S G++L + +G P NG + D+
Sbjct: 214 CDVWSTGVILYILLSGCPPFNGANEYDI 241
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 10/52 (19%)
Query: 300 FDFLIKKKLDIAIDVARALK-------YLHCDCQPRIAHCNLKPSNVLLDDE 344
FD +I +K +D AR ++ Y+H + +I H +LKP N+LL+ +
Sbjct: 120 FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESK 168
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 32/219 (14%)
Query: 182 INNLSFKDLYDATNGFSSA---------NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIR 231
++ +F+D A F+ +IG G FG V +G L G ++
Sbjct: 7 VDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK 66
Query: 232 PGGA----RSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWL 287
G R F SE H NI+ + V+ + ++ ++M NGSL+ +L
Sbjct: 67 AGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-----CKPVMIITEYMENGSLDAFL 121
Query: 288 HGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIG 347
K+D + ++ +++ + +KYL H +L N+L++ ++
Sbjct: 122 R-KNDGRFTVIQLVGMLR-------GIGSGMKYLS---DMSAVHRDLAARNILVNSNLVC 170
Query: 348 HVGDFSMARFLPDTDEQ--TRFIGKLNVRNFVKMALSQR 384
V DF M+R L D E T GK+ +R A++ R
Sbjct: 171 KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 209
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + APE + +S
Sbjct: 154 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 213
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI++ E+ + G RP M D+
Sbjct: 214 ASDVWSYGIVMWEVMSYGERPYWDMSNQDV 243
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 17/88 (19%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP---------VETSFIDVMGTIGYVAPEYGMG 51
H D+K N+ L ++ + + DFG++ FL V +F+ GT ++APE +
Sbjct: 139 HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV---GTPCWMAPE--VM 193
Query: 52 SEVSSY---GDVYSFGILLLEMFTGLRP 76
+V Y D++SFGI +E+ TG P
Sbjct: 194 EQVRGYDFKADIWSFGITAIELATGAAP 221
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+V L+YLH + Q H ++K N+LL ++ + DF ++ FL + TR
Sbjct: 124 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 174
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D+ + L DFGIA + F ++ GT +VAPE +
Sbjct: 131 HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL 190
Query: 57 YGDVYSFGILLLEMFTGLRPNNGMFKDD 84
D++S G++ + +G P G K +
Sbjct: 191 EADMWSIGVITYILLSGASPFLGETKQE 218
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 10/54 (18%)
Query: 300 FDFLIKKKLDIAIDVARALK-------YLHCDCQPRIAHCNLKPSNVLLDDEMI 346
FDFL +K+ + + LK YLH RIAH +LKP N++L D+ +
Sbjct: 96 FDFLAEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNV 146
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 1 HCDLKPSNVFLDDEM--------TAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS 52
H DLK SN+ + ++ + DFG+AR T+ + G ++APE S
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-RTTKMSAAGAYAWMAPEVIRAS 189
Query: 53 EVSSYGDVYSFGILLLEMFTGLRPNNGM 80
S DV+S+G+LL E+ TG P G+
Sbjct: 190 MFSKGSDVWSYGVLLWELLTGEVPFRGI 217
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 44/175 (25%)
Query: 202 LIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR------------SFKSECKAAINIR 249
+IG G FG VY + G +AVK AR + + E K ++
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVK--------AARHDPDEDISQTIENVRQEAKLFAMLK 64
Query: 250 HRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD 309
H NI+ A+ GV + +V +F G L L GK L+N+
Sbjct: 65 HPNII----ALRGVCLKEPNL-CLVMEFARGGPLNRVLSGKRIPPDILVNW--------- 110
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEM--------IGHVGDFSMAR 356
A+ +AR + YLH + I H +LK SN+L+ ++ I + DF +AR
Sbjct: 111 -AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 203 IGAGNFGSV----YNGTLFDGTTIAVKVFNLIRPGGAR---SFKSECKAAINIRHRNIVR 255
+G G+FG V Y+ D T V V +L G K E + N+ H NIV+
Sbjct: 29 LGEGHFGKVELCRYDPE-GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
+ + D G ++ +F+P+GSL+E+L + +N +K++L A+ +
Sbjct: 88 -YKGICTED--GGNGIKLIMEFLPSGSLKEYLPKNKNK----IN----LKQQLKYAVQIC 136
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
+ + YL + H +L NVL++ E +GDF + + + +TD++
Sbjct: 137 KGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETDKE 181
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV ++ E +GDFG+ + + + V + + APE M S+
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI 208
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG+ L E+ T
Sbjct: 209 ASDVWSFGVTLHELLT 224
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 HCDLKPSNVFLDD---EMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+ + + DFG++ D +GT Y+APE G+
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEK 207
Query: 58 GDVYSFGILLLEMFTGLRPNNG 79
DV+S G++L + +G P NG
Sbjct: 208 CDVWSTGVILYILLSGCPPFNG 229
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 35/160 (21%)
Query: 194 TNGFSSANLIGAGNFGSV-YNGTLFDGTTIAVKVFN---LIRPGGARSFKSECKAAINIR 249
++ + ++G G+FG V G AVKV + + + S E + +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 250 HRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD 309
H NI++++ ++ + +V + G L FD +I +K
Sbjct: 85 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGEL----------------FDEIISRKRF 123
Query: 310 IAIDVARALK-------YLHCDCQPRIAHCNLKPSNVLLD 342
+D AR ++ Y+H + +I H +LKP N+LL+
Sbjct: 124 SEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLE 160
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 203 IGAGNFGSV----YNGTLFDGTTIAVKVFNLIRPGGAR---SFKSECKAAINIRHRNIVR 255
+G G+FG V Y+ T DGT V V L G + ++ E + + H +IV+
Sbjct: 16 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
QG + +V +++P GSL ++L +LL F A +
Sbjct: 75 YKGCCED---QGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF----------AQQIC 121
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ YLH H L NVLLD++ + +GDF +A+ +P+ E R
Sbjct: 122 EGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 169
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H L NV LD++ +GDFG+A+ +P + V + + APE +
Sbjct: 134 HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYY 193
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG+ L E+ T
Sbjct: 194 ASDVWSFGVTLYELLT 209
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D+ + L DFGIA + F ++ GT +VAPE +
Sbjct: 138 HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 57 YGDVYSFGILLLEMFTGLRPNNGMFKDD 84
D++S G++ + +G P G K +
Sbjct: 198 EADMWSIGVITYILLSGASPFLGETKQE 225
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 10/54 (18%)
Query: 300 FDFLIKKKLDIAIDVARALK-------YLHCDCQPRIAHCNLKPSNVLLDDEMI 346
FDFL +K+ + + LK YLH RIAH +LKP N++L D+ +
Sbjct: 103 FDFLAEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNV 153
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLK N+ LD +M + DFG + V G+ Y APE G + D
Sbjct: 137 HRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 196
Query: 60 VYSFGILLLEMFTGLRPNNG 79
V+S G++L + +G P +G
Sbjct: 197 VWSLGVILYTLVSGSLPFDG 216
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 20/156 (12%)
Query: 203 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGARSFKSECKAAINIRHRNIVRVFTA 259
IG GNF V + G +AVK+ + + P + E + + H NIV++F
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALK 319
+ + + +V ++ G + ++L H R+ + K + + A++
Sbjct: 83 I-----ETEKTLYLVMEYASGGEVFDYLVA----HGRMKEKEARAKFR-----QIVSAVQ 128
Query: 320 YLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
Y H Q I H +LK N+LLD +M + DF +
Sbjct: 129 YCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 202 LIGAGNFGSVYNGTL-FDGT---TIAVKVFNL-IRPGGARSFKSECKAAINIRHRNIVRV 256
+IGAG FG V +G L G +A+K + R F E H NI+ +
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
V+ ++ +V ++M NGSL+ +L D F + + + + ++
Sbjct: 89 EGVVTK-----SKPVMIVTEYMENGSLDTFLKKNDG--------QFTVIQLVGMLRGISA 135
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ--TRFIGKLNVR 374
+KYL H +L N+L++ ++ V DF ++R L D E T GK+ +R
Sbjct: 136 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 192
Query: 375 NFVKMALSQR 384
A++ R
Sbjct: 193 WTAPEAIAFR 202
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIG--YVAPEYGMGSEVSS 56
H DL N+ ++ + + DFG++R L E ++ G I + APE + +S
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTS 206
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+S+GI++ E+ + G RP M D+
Sbjct: 207 ASDVWSYGIVMWEVVSYGERPYWEMTNQDV 236
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G + + L +L FD ++
Sbjct: 71 RHPNILRLY----GYFHDATRV-YLILEYAPRGEVYKELQ-------KLSKFD--EQRTA 116
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 117 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 170
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 195 WSLGVLCYEFLVGKPP 210
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGD 59
H DLK N+FL+D+M +GDFG+A + + + GT Y+APE S D
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVD 224
Query: 60 VYSFGILLLEMFTGLRP 76
++S G +L + G P
Sbjct: 225 IWSLGCILYTLLVGKPP 241
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ ++YLH + R+ H +LK N+ L+D+M +GDF +A
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDD---EMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+ + + DFG++ D +GT Y+APE G+
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEK 207
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDL 85
DV+S G++L + +G P NG + D+
Sbjct: 208 CDVWSTGVILYILLSGCPPFNGANEYDI 235
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 203 IGAGNFGSV----YNGTLFDGTTIAVKVFNLIRPGGAR---SFKSECKAAINIRHRNIVR 255
+G G+FG V Y+ T DGT V V L G + ++ E + + H +IV+
Sbjct: 17 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
QG + +V +++P GSL ++L +LL F A +
Sbjct: 76 YKGCCED---QGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF----------AQQIC 122
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTR 366
+ YLH H L NVLLD++ + +GDF +A+ +P+ E R
Sbjct: 123 EGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 170
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H L NV LD++ +GDFG+A+ +P + V + + APE +
Sbjct: 135 HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYY 194
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG+ L E+ T
Sbjct: 195 ASDVWSFGVTLYELLT 210
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 203 IGAGNFGSV----YNGTLFDGTTIAVKVFNLIRPGGAR---SFKSECKAAINIRHRNIVR 255
+G G+FG V Y+ D T V V +L G K E + N+ H NIV+
Sbjct: 17 LGEGHFGKVELCRYDPE-GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
+ + D G ++ +F+P+GSL+E+L + +N +K++L A+ +
Sbjct: 76 -YKGICTED--GGNGIKLIMEFLPSGSLKEYLPKNKNK----IN----LKQQLKYAVQIC 124
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
+ + YL + H +L NVL++ E +GDF + + + +TD++
Sbjct: 125 KGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETDKE 169
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV ++ E +GDFG+ + + + V + + APE M S+
Sbjct: 137 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI 196
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG+ L E+ T
Sbjct: 197 ASDVWSFGVTLHELLT 212
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H D+ NV + LGDFG++R++ T + G I ++APE +S
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 195
Query: 59 DVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+ FG+ + E+ G++P G+ +D+
Sbjct: 196 DVWMFGVCMWEILMHGVKPFQGVKNNDV 223
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 34/183 (18%)
Query: 203 IGAGNFGSVYNGTLFD----GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVRVF 257
IG G FG V+ G +A+K R F E H +IV++
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIA------ 311
++ + V+ M +L E L +F + K LD+A
Sbjct: 80 GVIT---------ENPVWIIMELCTLGE-----------LRSFLQVRKYSLDLASLILYA 119
Query: 312 IDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKL 371
++ AL YL R H ++ NVL+ +GDF ++R++ D+ GKL
Sbjct: 120 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 176
Query: 372 NVR 374
++
Sbjct: 177 PIK 179
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H D+ NV + LGDFG++R++ T + G I ++APE +S
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 573
Query: 59 DVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+ FG+ + E+ G++P G+ +D+
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNNDV 601
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 75/205 (36%), Gaps = 22/205 (10%)
Query: 175 VYEEKQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLFD----GTTIAVKVFNLI 230
+ +E+ T S +D IG G FG V+ G +A+K
Sbjct: 370 IIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC 429
Query: 231 RPGGAR-SFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG 289
R F E H +IV++ GV + + ++ + G L +L
Sbjct: 430 TSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTLGELRSFLQV 483
Query: 290 KDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
+ F + + A ++ AL YL R H ++ NVL+ +
Sbjct: 484 R--------KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKL 532
Query: 350 GDFSMARFLPDTDEQTRFIGKLNVR 374
GDF ++R++ D+ GKL ++
Sbjct: 533 GDFGLSRYMEDSTYYKASKGKLPIK 557
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSG 262
+G G +G V+ G+ + G +AVK+F+ R + ++E + +RH NI+ F A
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILG-FIASDM 72
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLH 322
+ ++ + GSL ++L +L D + L I + +A L +LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTV--SCLRIVLSIASGLAHLH 122
Query: 323 CDC-----QPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ +P IAH +LK N+L+ + D +A
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-----MGTIGYVAPEYGMGSEVS 55
H DLK N+ + + D G+A T+ +DV +GT Y+APE + +
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV-LDETIQ 194
Query: 56 -----SYG--DVYSFGILLLEMFTGLRPNNGMFKD 83
SY D+++FG++L E+ + +NG+ +D
Sbjct: 195 VDCFDSYKRVDIWAFGLVLWEVARRM-VSNGIVED 228
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-- 58
H D+KPSN+ +D L DFG + ++ V+ GT ++ PE+ S SSY
Sbjct: 175 HRDVKPSNILMDKNGRVKLSDFGESEYM-VDKKIKGSRGTYEFMPPEF--FSNESSYNGA 231
Query: 59 --DVYSFGILLLEMFTGLRP 76
D++S GI L MF + P
Sbjct: 232 KVDIWSLGICLYVMFYNVVP 251
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 273 VVYKFMPNGSLEEWLHGKDDTHWRLLNFDFL----IKKKLDIAIDVARALKYLHCDCQPR 328
++Y++M N S+ ++ D ++ +L+ ++ I+ I V + Y+H +
Sbjct: 120 IIYEYMENDSILKF-----DEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKN 172
Query: 329 IAHCNLKPSNVLLDDEMIGHVGDFSMARFLPD 360
I H ++KPSN+L+D + DF + ++ D
Sbjct: 173 ICHRDVKPSNILMDKNGRVKLSDFGESEYMVD 204
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H D+ NV + LGDFG++R++ T + G I ++APE +S
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 190
Query: 59 DVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+ FG+ + E+ G++P G+ +D+
Sbjct: 191 DVWMFGVCMWEILMHGVKPFQGVKNNDV 218
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 34/183 (18%)
Query: 203 IGAGNFGSVYNGTLFD----GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVRVF 257
IG G FG V+ G +A+K R F E H +IV++
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIA------ 311
++ + V+ M +L E L +F + K LD+A
Sbjct: 75 GVIT---------ENPVWIIMELCTLGE-----------LRSFLQVRKYSLDLASLILYA 114
Query: 312 IDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKL 371
++ AL YL R H ++ NVL+ +GDF ++R++ D+ GKL
Sbjct: 115 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 171
Query: 372 NVR 374
++
Sbjct: 172 PIK 174
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H D+ NV + LGDFG++R++ T + G I ++APE +S
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 59 DVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+ FG+ + E+ G++P G+ +D+
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDV 221
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 67/177 (37%), Gaps = 22/177 (12%)
Query: 203 IGAGNFGSVYNGTLFD----GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVRVF 257
IG G FG V+ G +A+K R F E H +IV++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
GV + + ++ + G L +L + + + + A ++ A
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KYSLDLASLILYAYQLSTA 123
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
L YL R H ++ NVL+ +GDF ++R++ D+ GKL ++
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H D+ NV + LGDFG++R++ T + G I ++APE +S
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 59 DVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+ FG+ + E+ G++P G+ +D+
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDV 221
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 67/177 (37%), Gaps = 22/177 (12%)
Query: 203 IGAGNFGSVYNGTLFD----GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVRVF 257
IG G FG V+ G +A+K R F E H +IV++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
GV + + ++ + G L +L + + + + A ++ A
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KYSLDLASLILYAYQLSTA 123
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
L YL R H ++ NVL+ +GDF ++R++ D+ GKL ++
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSG 262
+G G +G V+ G+ + G +AVK+F+ R + ++E + +RH NI+ F A
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILG-FIASDM 72
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLH 322
+ ++ + GSL ++L +L D + L I + +A L +LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTV--SCLRIVLSIASGLAHLH 122
Query: 323 CDC-----QPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ +P IAH +LK N+L+ + D +A
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-----MGTIGYVAPEYGMGSEVS 55
H DLK N+ + + D G+A T+ +DV +GT Y+APE + +
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV-LDETIQ 194
Query: 56 -----SYG--DVYSFGILLLEMFTGLRPNNGMFKD 83
SY D+++FG++L E+ + +NG+ +D
Sbjct: 195 VDCFDSYKRVDIWAFGLVLWEVARRM-VSNGIVED 228
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D+ + L DFGIA + F ++ GT +VAPE +
Sbjct: 152 HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL 211
Query: 57 YGDVYSFGILLLEMFTGLRPNNGMFKDD 84
D++S G++ + +G P G K +
Sbjct: 212 EADMWSIGVITYILLSGASPFLGETKQE 239
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 10/54 (18%)
Query: 300 FDFLIKKKLDIAIDVARALK-------YLHCDCQPRIAHCNLKPSNVLLDDEMI 346
FDFL +K+ + + LK YLH RIAH +LKP N++L D+ +
Sbjct: 117 FDFLAEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNV 167
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H D+ NV + LGDFG++R++ T + G I ++APE +S
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 196
Query: 59 DVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+ FG+ + E+ G++P G+ +D+
Sbjct: 197 DVWMFGVCMWEILMHGVKPFQGVKNNDV 224
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 34/183 (18%)
Query: 203 IGAGNFGSVYNGTLFD----GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVRVF 257
IG G FG V+ G +A+K R F E H +IV++
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIA------ 311
++ + V+ M +L E L +F + K LD+A
Sbjct: 81 GVIT---------ENPVWIIMELCTLGE-----------LRSFLQVRKYSLDLASLILYA 120
Query: 312 IDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKL 371
++ AL YL R H ++ NVL+ +GDF ++R++ D+ GKL
Sbjct: 121 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 177
Query: 372 NVR 374
++
Sbjct: 178 PIK 180
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N ++D+ + DFG++R++ ++ + +G+ + + PE M S+ SS
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 58 GDVYSFGILLLEMFT 72
D+++FG+L+ E+++
Sbjct: 182 SDIWAFGVLMWEIYS 196
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N ++D+ + DFG++R++ ++ + +G+ + + PE M S+ SS
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 58 GDVYSFGILLLEMFT 72
D+++FG+L+ E+++
Sbjct: 186 SDIWAFGVLMWEIYS 200
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H D+ NV + LGDFG++R++ T + G I ++APE +S
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 198
Query: 59 DVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+ FG+ + E+ G++P G+ +D+
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQGVKNNDV 226
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 34/183 (18%)
Query: 203 IGAGNFGSVYNGTLFD----GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVRVF 257
IG G FG V+ G +A+K R F E H +IV++
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIA------ 311
++ + V+ M +L E L +F + K LD+A
Sbjct: 83 GVIT---------ENPVWIIMELCTLGE-----------LRSFLQVRKYSLDLASLILYA 122
Query: 312 IDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKL 371
++ AL YL R H ++ NVL+ +GDF ++R++ D+ GKL
Sbjct: 123 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 179
Query: 372 NVR 374
++
Sbjct: 180 PIK 182
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDD---EMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+ + + DFG++ D +GT Y+APE G+
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEK 231
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDL 85
DV+S G++L + +G P NG + D+
Sbjct: 232 CDVWSTGVILYILLSGCPPFNGANEYDI 259
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 10/50 (20%)
Query: 300 FDFLIKKKLDIAIDVARALK-------YLHCDCQPRIAHCNLKPSNVLLD 342
FD +I +K +D AR ++ Y+H + +I H +LKP N+LL+
Sbjct: 138 FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLE 184
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDD---EMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+ + + DFG++ D +GT Y+APE G+
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEK 230
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDL 85
DV+S G++L + +G P NG + D+
Sbjct: 231 CDVWSTGVILYILLSGCPPFNGANEYDI 258
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 10/50 (20%)
Query: 300 FDFLIKKKLDIAIDVARALK-------YLHCDCQPRIAHCNLKPSNVLLD 342
FD +I +K +D AR ++ Y+H + +I H +LKP N+LL+
Sbjct: 137 FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLE 183
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSG 262
+G G +G V+ G+ + G +AVK+F+ R + ++E + +RH NI+ F A
Sbjct: 45 VGKGRYGEVWRGS-WQGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILG-FIASDM 101
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLH 322
+ ++ + GSL ++L +L D + L I + +A L +LH
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTV--SCLRIVLSIASGLAHLH 151
Query: 323 CDC-----QPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
+ +P IAH +LK N+L+ + D +A
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDV-----MGTIGYVAPEYGMGSEVS 55
H DLK N+ + + D G+A T+ +DV +GT Y+APE + +
Sbjct: 165 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV-LDETIQ 223
Query: 56 -----SYG--DVYSFGILLLEMFTGLRPNNGMFKD 83
SY D+++FG++L E+ + +NG+ +D
Sbjct: 224 VDCFDSYKRVDIWAFGLVLWEVARRM-VSNGIVED 257
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF-------------LPVETSFIDVMGTIGYVAPE 47
H DLKPSN+F + +GDFG+ +P + +GT Y++PE
Sbjct: 187 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPE 246
Query: 48 YGMGSEVSSYGDVYSFGILLLEMF 71
G+ S D++S G++L E+
Sbjct: 247 QIHGNNYSHKVDIFSLGLILFELL 270
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 308 LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL-PDTDEQT 365
L I I +A A+++LH + H +LKPSN+ + + VGDF + + D +EQT
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N ++D+ + DFG++R++ ++ + +G+ + + PE M S+ SS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 58 GDVYSFGILLLEMFT 72
D+++FG+L+ E+++
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N ++D+ + DFG++R++ ++ + +G+ + + PE M S+ SS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 58 GDVYSFGILLLEMFT 72
D+++FG+L+ E+++
Sbjct: 202 SDIWAFGVLMWEIYS 216
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG--TIGYVAPEYGMGSEVSSYG 58
H D+ NV + LGDFG++R++ T + G I ++APE +S
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 221
Query: 59 DVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+ FG+ + E+ G++P G+ +D+
Sbjct: 222 DVWMFGVCMWEILMHGVKPFQGVKNNDV 249
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 67/177 (37%), Gaps = 22/177 (12%)
Query: 203 IGAGNFGSVYNGTLFD----GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVRVF 257
IG G FG V+ G +A+K R F E H +IV++
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
GV + + ++ + G L +L + + + + A ++ A
Sbjct: 106 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KYSLDLASLILYAYQLSTA 151
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
L YL R H ++ NVL+ +GDF ++R++ D+ GKL ++
Sbjct: 152 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 205
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR---FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
DLK NV LD E + DFG+ + + V T GT Y+APE D
Sbjct: 467 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF--CGTPDYIAPEIIAYQPYGKSVD 524
Query: 60 VYSFGILLLEMFTGLRPNNGMFKDDL 85
++FG+LL EM G P G +D+L
Sbjct: 525 WWAFGVLLYEMLAGQAPFEGEDEDEL 550
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 92 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 137
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 138 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 191
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 215
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 216 WSLGVLCYEFLVGKPP 231
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM----GTIGYVAPEYGMGSEVSS 56
H DL NV L + A + DFG+++ L + + + + APE + SS
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+SFG+L+ E F+ G +P GM
Sbjct: 194 KSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 83 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 128
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 129 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 182
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 206
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 207 WSLGVLCYEFLVGKPP 222
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLK N+ LD +M + DFG + V G+ Y APE G + D
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVD 193
Query: 60 VYSFGILLLEMFTGLRPNNG 79
V+S G++L + +G P +G
Sbjct: 194 VWSLGVILYTLVSGSLPFDG 213
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 203 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGARSFKSECKAAINIRHRNIVRVFTA 259
IG GNF V + G +A+K+ + + P + E + + H NIV++F
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
+ + + ++ ++ G + ++L HG+ F + A
Sbjct: 80 I-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----------QIVSA 123
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
++Y H Q RI H +LK N+LLD +M + DF +
Sbjct: 124 VQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N ++D+ + DFG++R++ ++ + +G+ + + PE M S+ SS
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 58 GDVYSFGILLLEMFT 72
D+++FG+L+ E+++
Sbjct: 193 SDIWAFGVLMWEIYS 207
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 39/178 (21%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNI 253
F ++G G FG V D A+K IR + + SE ++ H+ +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK---IRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 254 VRVFTA----------VSGVDYQGARFKAVVYKFMPNGSLEEWLHGKD-----DTHWRLL 298
VR + A ++ V + F + ++ NG+L + +H ++ D +WRL
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLF--IQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 299 NFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ AL Y+H I H +LKP N+ +D+ +GDF +A+
Sbjct: 123 R-------------QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 16/86 (18%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIAR-------FLPVET--------SFIDVMGTIGYVA 45
H DLKP N+F+D+ +GDFG+A+ L +++ + +GT YVA
Sbjct: 139 HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVA 198
Query: 46 PEYGMGS-EVSSYGDVYSFGILLLEM 70
E G+ + D+YS GI+ EM
Sbjct: 199 TEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H D+ NV + LGDFG++R++ T + G I ++APE +S
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 573
Query: 59 DVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+ FG+ + E+ G++P G+ +D+
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNNDV 601
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 75/205 (36%), Gaps = 22/205 (10%)
Query: 175 VYEEKQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLFD----GTTIAVKVFNLI 230
+ +E+ T S +D IG G FG V+ G +A+K
Sbjct: 370 IIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC 429
Query: 231 RPGGAR-SFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG 289
R F E H +IV++ GV + + ++ + G L +L
Sbjct: 430 TSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTLGELRSFLQV 483
Query: 290 KDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
+ F + + A ++ AL YL R H ++ NVL+ +
Sbjct: 484 R--------KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKL 532
Query: 350 GDFSMARFLPDTDEQTRFIGKLNVR 374
GDF ++R++ D+ GKL ++
Sbjct: 533 GDFGLSRYMEDSTYYKASKGKLPIK 557
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G + + L +L FD ++
Sbjct: 71 RHPNILRLY----GYFHDATRV-YLILEYAPRGEVYKELQ-------KLSKFD--EQRTA 116
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
++A AL Y H R+ H ++KP N+LL + DF + P +
Sbjct: 117 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 166
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRXXLXGTLDYLPPEMIEGRMHDEKVDL 194
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 195 WSLGVLCYEFLVGKPP 210
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H D+ NV + LGDFG++R++ T + G I ++APE +S
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 59 DVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+ FG+ + E+ G++P G+ +D+
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDV 221
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 67/177 (37%), Gaps = 22/177 (12%)
Query: 203 IGAGNFGSVYNGTLFD----GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVRVF 257
IG G FG V+ G +A+K R F E H +IV++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
GV + + ++ + G L +L + F + + A ++ A
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KFSLDLASLILYAYQLSTA 123
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
L YL R H ++ NVL+ +GDF ++R++ D+ GKL ++
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 69 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 114
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 115 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 168
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 193 WSLGVLCYEFLVGKPP 208
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 1 HCDLKPSNVFLDDEM----TAHLGDFGIARFLPVETSFI-DVMGTIGYVAPEYGMGSEVS 55
H DLKPSN+ DE + + DFG A+ L E + T +VAPE
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYD 198
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
+ D++S G+LL M TG P
Sbjct: 199 AACDIWSLGVLLYTMLTGYTP 219
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 194 TNGFSSANLIGAGNFGSVYNGTLFDGTTI--AVKVFNLIRPGGARSFKSECKAAINI-RH 250
T+G+ IG G++ SV + T + AVK+ + R E + + +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIID----KSKRDPTEEIEILLRYGQH 75
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD- 309
NI+ + Y ++ VV + M G L + ++L F +++
Sbjct: 76 PNIITLKDV-----YDDGKYVYVVTELMKGGELLD----------KILRQKFFSEREASA 120
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDE 344
+ + + ++YLH + H +LKPSN+L DE
Sbjct: 121 VLFTITKTVEYLHAQG---VVHRDLKPSNILYVDE 152
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEMFTG 73
+S G ++ EM G
Sbjct: 209 WSVGCIMGEMIKG 221
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 36/176 (20%)
Query: 207 NFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---T 258
NF SV G D T +K + ++P G+ + C A I RN+ R F T
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 259 AVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+ K V +K F P SLEE+ D + + D + + + +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLSQVIQM 121
Query: 311 AIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 27/182 (14%)
Query: 186 SFKDLYDATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVK----VFNLIRPGGARSFKS 240
SF +D + + IG G +G V + G +A+K F+++ A+
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV--TNAKRTLR 103
Query: 241 ECKAAINIRHRNIVRVFTAV-SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDD---THWR 296
E K + +H NI+ + + V Y + VV M L + +H H R
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVR 162
Query: 297 LLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ L R LKY+H ++ H +LKPSN+L+++ +GDF MAR
Sbjct: 163 YFLYQLL------------RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMAR 207
Query: 357 FL 358
L
Sbjct: 208 GL 209
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL---PVETSFI--DVMGTIGYVAPEYGMG-SEV 54
H DLKPSN+ +++ +GDFG+AR L P E + + + T Y APE + E
Sbjct: 182 HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEY 241
Query: 55 SSYGDVYSFGILLLEMFT 72
+ D++S G + EM
Sbjct: 242 TQAIDLWSVGCIFGEMLA 259
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 69 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 114
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 115 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 168
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 193 WSLGVLCYEFLVGKPP 208
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGI-ARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H D+K N+ L + + L DFG A+ P ++ +++GT ++APE D
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 60 VYSFGILLLEMFTGLRP 76
++S GI+ +EM G P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 71 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 116
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 117 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 170
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 195 WSLGVLCYEFLVGKPP 210
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEY-----GMGSEVS 55
H D+KPSN+ LD+ L DFGI+ L + + G Y+APE +
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYD 207
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
DV+S GI L+E+ TG P
Sbjct: 208 IRADVWSLGISLVELATGQFP 228
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
+ + + +AL YL + + H ++KPSN+LLD+ + DF ++ L D + R G
Sbjct: 129 MTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAG 186
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 67 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 112
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 113 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT 166
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGD 59
H D+KP N+ L + DFG + P +S D + GT+ Y+ PE G D
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRDTLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 60 VYSFGILLLEMFTGLRP 76
++S G+L E G P
Sbjct: 190 LWSLGVLCYEFLVGKPP 206
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 22/184 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 66 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 111
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI 368
++A AL Y H R+ H ++KP N+LL + DF + P + +T
Sbjct: 112 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTELC 167
Query: 369 GKLN 372
G L+
Sbjct: 168 GTLD 171
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + ++ GT+ Y+ PE G D+
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTELCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 190 WSLGVLCYEFLVGKPP 205
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVET-SFIDVMGTIGYVAPEYGMGS-EVSSYG 58
H DLKP N+ +++ L DFG+AR + T ++ + + T+ Y P+ +GS + S+
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQI 182
Query: 59 DVYSFGILLLEMFTGLRP 76
D++ G + EM TG RP
Sbjct: 183 DMWGVGCIFYEMATG-RP 199
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 203 IGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVRVFTAV 260
+G G + +VY G + +A+K L GA + E +++H NIV + +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 261 SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKY 320
+ +V++++ + L+++L DD N + KL + R L Y
Sbjct: 70 -----HTEKSLTLVFEYL-DKDLKQYL---DDCG----NIINMHNVKL-FLFQLLRGLAY 115
Query: 321 LHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
H + ++ H +LKP N+L+++ + DF +AR
Sbjct: 116 CH---RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEMFTG 73
+S G ++ EM G
Sbjct: 209 WSVGCIMGEMIKG 221
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 36/176 (20%)
Query: 207 NFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---T 258
NF SV G D T +K + ++P G+ + C A I RN+ R F T
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 259 AVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+ K V +K F P SLEE+ D + + D + + + +
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLSQVIQM 121
Query: 311 AIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLAGTPEYLAPEIILSKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 66 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 111
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 112 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 165
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 190 WSLGVLCYEFLVGKPP 205
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGD 59
H DLK N+FL++++ +GDFG+A + + V+ GT Y+APE S D
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 221
Query: 60 VYSFGILLLEMFTGLRP 76
V+S G ++ + G P
Sbjct: 222 VWSIGCIMYTLLVGKPP 238
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 16/86 (18%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIAR-------FLPVET--------SFIDVMGTIGYVA 45
H DLKP N+F+D+ +GDFG+A+ L +++ + +GT YVA
Sbjct: 139 HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVA 198
Query: 46 PEYGMGS-EVSSYGDVYSFGILLLEM 70
E G+ + D+YS GI+ EM
Sbjct: 199 TEVLDGTGHYNEKIDMYSLGIIFFEM 224
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 39/178 (21%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNI 253
F ++G G FG V D A+K IR + + SE ++ H+ +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK---IRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 254 VRVFTA----------VSGVDYQGARFKAVVYKFMPNGSLEEWLHGKD-----DTHWRLL 298
VR + A ++ V + F + ++ N +L + +H ++ D +WRL
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLF--IQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 299 NFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ AL Y+H I H +LKP N+ +D+ +GDF +A+
Sbjct: 123 R-------------QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEMFTG 73
+S G ++ EM G
Sbjct: 209 WSVGCIMGEMIKG 221
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 36/176 (20%)
Query: 207 NFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---T 258
NF SV G D T +K + ++P G+ + C A I RN+ R F T
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 259 AVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+ K V +K F P SLEE+ D + + D + + + +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQM 121
Query: 311 AIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 27/182 (14%)
Query: 186 SFKDLYDATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVK----VFNLIRPGGARSFKS 240
SF +D + + IG G +G V + G +A+K F+++ A+
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV--TNAKRTLR 102
Query: 241 ECKAAINIRHRNIVRVFTAV-SGVDYQGARFKAVVYKFMPNGSLEEWLHGKDD---THWR 296
E K + +H NI+ + + V Y + VV M L + +H H R
Sbjct: 103 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVR 161
Query: 297 LLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ L R LKY+H ++ H +LKPSN+L+++ +GDF MAR
Sbjct: 162 YFLYQLL------------RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMAR 206
Query: 357 FL 358
L
Sbjct: 207 GL 208
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL---PVETSFI--DVMGTIGYVAPEYGMG-SEV 54
H DLKPSN+ +++ +GDFG+AR L P E + + + T Y APE + E
Sbjct: 181 HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEY 240
Query: 55 SSYGDVYSFGILLLEMFT 72
+ D++S G + EM
Sbjct: 241 TQAIDLWSVGCIFGEMLA 258
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLXGTPEYLAPEIILSKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEMFTG 73
+S G ++ EM G
Sbjct: 209 WSVGCIMGEMIKG 221
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 36/176 (20%)
Query: 207 NFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---T 258
NF SV G D T +K + ++P G+ + C A I RN+ R F T
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 259 AVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+ K V +K F P SLEE+ D + + D + + + +
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLSQVIQM 121
Query: 311 AIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 122 ELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 61 YSFGILLLEMFTG 73
+S G ++ EM G
Sbjct: 210 WSVGCIMGEMIKG 222
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 36/176 (20%)
Query: 207 NFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---T 258
NF SV G D T +K + ++P G+ + C A I RN+ R F T
Sbjct: 10 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 66
Query: 259 AVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+ K V +K F P SLEE+ D + + D + + + +
Sbjct: 67 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQM 122
Query: 311 AIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + ++ D + ++APE +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDE 249
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK-----------DDTHWRLLNF 300
N+V + A + G V+ +F G+L +L K +D + L
Sbjct: 83 NVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 301 DFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLP 359
+ LI + VA+ +++L + H +L N+LL ++ + + DF +AR
Sbjct: 139 EHLIC----YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 191
Query: 360 DTDEQTRFIGKLNVRNFVKMALSQRVEEILND 391
D D + +L ++ + RV I +D
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 223
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 65 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 110
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 111 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 164
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 130 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 188
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 189 WSLGVLCYEFLVGKPP 204
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEMFTG 73
+S G ++ EM G
Sbjct: 209 WSVGCIMGEMIKG 221
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 36/176 (20%)
Query: 207 NFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---T 258
NF SV G D T +K + ++P G+ + C A I RN+ R F T
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 259 AVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+ K V +K F P SLEE+ D + + D + + + +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQM 121
Query: 311 AIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 92 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 137
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
++A AL Y H R+ H ++KP N+LL + DF + P +
Sbjct: 138 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 187
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + D+ GT+ Y+ PE G D+
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRDDLCGTLDYLPPEMIEGRMHDEKVDL 215
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 216 WSLGVLCYEFLVGKPP 231
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLK N+ LD +M + DFG + V G Y APE G + D
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVD 196
Query: 60 VYSFGILLLEMFTGLRPNNG 79
V+S G++L + +G P +G
Sbjct: 197 VWSLGVILYTLVSGSLPFDG 216
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 203 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGARSFKSECKAAINIRHRNIVRVFTA 259
IG GNF V + G +A+K+ + + P + E + + H NIV++F
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
+ + + ++ ++ G + ++L HG+ F + A
Sbjct: 83 I-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----------QIVSA 126
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
++Y H Q RI H +LK N+LLD +M + DF +
Sbjct: 127 VQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 71 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 116
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 117 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 170
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEXIEGRXHDEKVDL 194
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 195 WSLGVLCYEFLVGKPP 210
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N ++D+ + DFG++R++ ++ + G+ + + PE M S+ SS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 58 GDVYSFGILLLEMFT 72
D+++FG+L+ E+++
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEMFTG 73
+S G ++ EM G
Sbjct: 209 WSVGCIMGEMIKG 221
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 36/176 (20%)
Query: 207 NFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---T 258
NF SV G D T +K + ++P G+ + C A I RN+ R F T
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 259 AVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+ K V +K F P SLEE+ D + + D + + + +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLSQVIQM 121
Query: 311 AIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 203 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G G FG V+ D +AVK + F+ E + ++H++IVR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFD-------FLIKKK 307
F GV +G R +V+++M +G L +L HG D +LL + +
Sbjct: 86 F----GVCTEG-RPLLMVFEYMRHGDLNRFLRSHGPDA---KLLAGGEDVAPGPLGLGQL 137
Query: 308 LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
L +A VA + YL H +L N L+ ++ +GDF M+R + TD
Sbjct: 138 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 189
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + + +GDFG++R + T + V G I ++ PE + + ++
Sbjct: 158 HRDLATRNCLVGQGLVVKIGDFGMSRDI-YSTDYYRVGGRTMLPIRWMPPESILYRKFTT 216
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 217 ESDVWSFGVVLWEIFT 232
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ V+ + + GT Y+APE + + D ++
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAK--RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 245 LGVLIYEMAAGYPP 258
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLK N+ LD +M + DFG + + G+ Y APE G + D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 60 VYSFGILLLEMFTGLRPNNG 79
V+S G++L + +G P +G
Sbjct: 196 VWSLGVILYTLVSGSLPFDG 215
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 203 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGARSFKSECKAAINIRHRNIVRVFTA 259
IG GNF V + G +AV++ + + + E + + H NIV++F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
+ + + +V ++ G + ++L HG+ F + A
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----------QIVSA 125
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
++Y H Q I H +LK N+LLD +M + DF +
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG+A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLMIDQQGYIQVTDFGLAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + ++ D + ++APE +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDE 249
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK-----------DDTHWRLLNF 300
N+V + A + G V+ +F G+L +L K +D + L
Sbjct: 83 NVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 301 DFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLP 359
+ LI + VA+ +++L + H +L N+LL ++ + + DF +AR
Sbjct: 139 EHLIC----YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 191
Query: 360 DTDEQTRFIGKLNVRNFVKMALSQRVEEILND 391
D D + +L ++ + RV I +D
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 223
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D++ + DFG A+ + T + GT Y+APE + + D
Sbjct: 151 YRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDW 208
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 209 WALGVLIYEMAAGYPP 224
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL--PVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H D+KP N+ + L DFG AR L P E + D + T Y APE +G YG
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV-YDDEVATRWYRAPELLVGD--VKYG 203
Query: 59 ---DVYSFGILLLEMFTG 73
DV++ G L+ EMF G
Sbjct: 204 KAVDVWAIGCLVTEMFMG 221
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 29/183 (15%)
Query: 184 NLSFKDLY-DATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVF------NLIRPGGA 235
+L ++LY + + + L+G G++G V D G +A+K F +++
Sbjct: 13 DLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAM 72
Query: 236 RSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW 295
R E K +RH N+V + + + +V++F+ + L DD
Sbjct: 73 R----EIKLLKQLRHENLVNLLEVC-----KKKKRWYLVFEFVDHTIL-------DDLEL 116
Query: 296 RLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
D+ + +K + + + H I H ++KP N+L+ + + DF A
Sbjct: 117 FPNGLDYQVVQKY--LFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFA 171
Query: 356 RFL 358
R L
Sbjct: 172 RTL 174
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGD 59
H DLK N+FL++++ +GDFG+A + + V+ GT Y+APE S D
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 223
Query: 60 VYSFGILLLEMFTGLRP 76
V+S G ++ + G P
Sbjct: 224 VWSIGCIMYTLLVGKPP 240
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + ++ D + ++APE +
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 275
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 276 SDVWSFGVLLWEIFSLGASPYPGVKIDE 303
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + ++ D + ++APE +
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 273
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 274 SDVWSFGVLLWEIFSLGASPYPGVKIDE 301
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + ++ D + ++APE +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDE 258
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK-----------DDTHWRLLNF 300
N+V + A + G +V +F G+L +L K +D + L
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 301 DFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLP 359
+ LI + VA+ +++L + H +L N+LL ++ + + DF +AR
Sbjct: 148 EHLIC----YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 200
Query: 360 DTDEQTRFIGKLNVRNFVKMALSQRVEEILND 391
D D + +L ++ + RV I +D
Sbjct: 201 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 232
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + ++ D + ++APE +
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 280
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 281 SDVWSFGVLLWEIFSLGASPYPGVKIDE 308
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGD 59
H DLK N+FL++++ +GDFG+A + + V+ GT Y+APE S D
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 197
Query: 60 VYSFGILLLEMFTGLRP 76
V+S G ++ + G P
Sbjct: 198 VWSIGCIMYTLLVGKPP 214
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 203 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
+G G FG V+ D +AVK + F+ E + ++H++IVR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFD-------FLIKKK 307
F GV +G R +V+++M +G L +L HG D +LL + +
Sbjct: 80 F----GVCTEG-RPLLMVFEYMRHGDLNRFLRSHGPDA---KLLAGGEDVAPGPLGLGQL 131
Query: 308 LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
L +A VA + YL H +L N L+ ++ +GDF M+R + TD
Sbjct: 132 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 183
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + + +GDFG++R + T + V G I ++ PE + + ++
Sbjct: 152 HRDLATRNCLVGQGLVVKIGDFGMSRDI-YSTDYYRVGGRTMLPIRWMPPESILYRKFTT 210
Query: 57 YGDVYSFGILLLEMFT 72
DV+SFG++L E+FT
Sbjct: 211 ESDVWSFGVVLWEIFT 226
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 167 DLKPENLLIDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + ++ D + ++APE +
Sbjct: 167 HRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 226
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 227 SDVWSFGVLLWEIFSLGASPYPGVKIDE 254
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDD--THWRLLNFDFLIKKKL- 308
N+V + A + G +V +F G+L +L K + ++ L DFL + L
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLPDTDEQTRF 367
+ VA+ +++L + H +L N+LL ++ + + DF +AR D D +
Sbjct: 148 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKG 204
Query: 368 IGKLNVRNFVKMALSQRVEEILND 391
+L ++ + RV I +D
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSD 228
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 70 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 115
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 116 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 169
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 135 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 194 WSLGVLCYEFLVGKPP 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVE-TSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLK NV LD E + DFG+ + ++ + + GT Y+APE D +
Sbjct: 145 DLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWW 204
Query: 62 SFGILLLEMFTGLRPNNGMFKDDL 85
++G+LL EM G P +G +D+L
Sbjct: 205 AYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT--IGYVAPEYGMGSEVSSYG 58
H D+ NV + LGDFG++R++ T G I ++APE +S
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 59 DVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+ FG+ + E+ G++P G+ +D+
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDV 221
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 67/177 (37%), Gaps = 22/177 (12%)
Query: 203 IGAGNFGSVYNGTLFD----GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVRVF 257
IG G FG V+ G +A+K R F E H +IV++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
GV + + ++ + G L +L + F + + A ++ A
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KFSLDLASLILYAYQLSTA 123
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
L YL R H ++ NVL+ +GDF ++R++ D+ GKL ++
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK 177
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + ++ D + ++APE +
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 282
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 283 SDVWSFGVLLWEIFSLGASPYPGVKIDE 310
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR---FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
DLK NV LD E + DFG+ + + V T GT Y+APE D
Sbjct: 146 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF--CGTPDYIAPEIIAYQPYGKSVD 203
Query: 60 VYSFGILLLEMFTGLRPNNGMFKDDL 85
++FG+LL EM G P G +D+L
Sbjct: 204 WWAFGVLLYEMLAGQAPFEGEDEDEL 229
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + ++ D + ++APE +
Sbjct: 173 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 232
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 233 SDVWSFGVLLWEIFSLGASPYPGVKIDE 260
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK-----------DDTHWRLLNF 300
N+V + A + G +V +F G+L +L K +D + L
Sbjct: 94 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTL 149
Query: 301 DFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLP 359
+ LI + VA+ +++L + H +L N+LL ++ + + DF +AR
Sbjct: 150 EHLIC----YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 202
Query: 360 DTDEQTRFIGKLNVRNFVKMALSQRVEEILND 391
D D + +L ++ + RV I +D
Sbjct: 203 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 22/184 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 66 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 111
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI 368
++A AL Y H R+ H ++KP N+LL + DF + P + +T
Sbjct: 112 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTXLC 167
Query: 369 GKLN 372
G L+
Sbjct: 168 GTLD 171
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTXLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 190 WSLGVLCYEFLVGKPP 205
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 22/184 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 66 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 111
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI 368
++A AL Y H R+ H ++KP N+LL + DF + P + +T
Sbjct: 112 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTDLC 167
Query: 369 GKLN 372
G L+
Sbjct: 168 GTLD 171
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + D+ GT+ Y+ PE G D+
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 190 WSLGVLCYEFLVGKPP 205
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 68 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 113
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
++A AL Y H R+ H ++KP N+LL + DF + P +
Sbjct: 114 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 163
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 133 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 191
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 192 WSLGVLCYEFLVGKPP 207
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEMFTG 73
+S G ++ EM G
Sbjct: 209 WSVGCIMGEMIKG 221
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 36/176 (20%)
Query: 207 NFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---T 258
NF SV G D T +K + ++P G+ + C A I RN+ R F T
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 259 AVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+ K V +K F P SLEE+ D + + D + + + +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQM 121
Query: 311 AIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + ++ D + ++APE +
Sbjct: 208 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 267
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 268 SDVWSFGVLLWEIFSLGASPYPGVKIDE 295
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 128
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK-----------DDTHWRLLNF 300
N+V + A + G +V +F G+L +L K +D + L
Sbjct: 129 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 184
Query: 301 DFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLP 359
+ LI + VA+ +++L + H +L N+LL ++ + + DF +AR
Sbjct: 185 EHLIC----YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 237
Query: 360 DTDEQTRFIGKLNVRNFVKMALSQRVEEILND 391
D D + +L ++ + RV I +D
Sbjct: 238 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 269
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 159 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDW 216
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 217 WALGVLIYEMAAGYPP 232
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 26/169 (15%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 68 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 113
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARF 357
++A AL Y H R+ H ++KP N+LL G G+ +A F
Sbjct: 114 TYITELANALSYCHSK---RVIHRDIKPENLLL-----GSAGELKIANF 154
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + +FG + P + + GT+ Y+ PE G D+
Sbjct: 133 HRDIKPENLLLGSAGELKIANFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 191
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 192 WSLGVLCYEFLVGKPP 207
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPE-YGMGSEVSSYGDVY 61
DLKP+N+ LD+ + D G+A + V GT GY+APE G S D +
Sbjct: 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWF 375
Query: 62 SFGILLLEMFTGLRP 76
S G +L ++ G P
Sbjct: 376 SLGCMLFKLLRGHSP 390
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPE-YGMGSEVSSYGDVY 61
DLKP+N+ LD+ + D G+A + V GT GY+APE G S D +
Sbjct: 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWF 375
Query: 62 SFGILLLEMFTGLRP 76
S G +L ++ G P
Sbjct: 376 SLGCMLFKLLRGHSP 390
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 26/169 (15%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 69 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 114
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARF 357
++A AL Y H R+ H ++KP N+LL G G+ +A F
Sbjct: 115 TYITELANALSYCHSK---RVIHRDIKPENLLL-----GSAGELKIANF 155
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + +FG + P + + GT+ Y+ PE G D+
Sbjct: 134 HRDIKPENLLLGSAGELKIANFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 193 WSLGVLCYEFLVGKPP 208
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WTLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPE-YGMGSEVSSYGDVY 61
DLKP+N+ LD+ + D G+A + V GT GY+APE G S D +
Sbjct: 316 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWF 374
Query: 62 SFGILLLEMFTGLRP 76
S G +L ++ G P
Sbjct: 375 SLGCMLFKLLRGHSP 389
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPE-YGMGSEVSSYGDVY 61
DLKP+N+ LD+ + D G+A + V GT GY+APE G S D +
Sbjct: 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWF 375
Query: 62 SFGILLLEMFTGLRP 76
S G +L ++ G P
Sbjct: 376 SLGCMLFKLLRGHSP 390
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + ++ D + ++APE +
Sbjct: 167 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 226
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 227 SDVWSFGVLLWEIFSLGASPYPGVKIDE 254
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDD--THWRLLNFDFLIKKKLD 309
N+V + A + G +V +F G+L +L K + ++ L DFL + L
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 310 -IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLPDTDEQTRF 367
+ VA+ +++L + H +L N+LL ++ + + DF +AR D D +
Sbjct: 148 CYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 204
Query: 368 IGKLNVRNFVKMALSQRVEEILND 391
+L ++ + RV I +D
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSD 228
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL NV + D++ + D G+ R + + ++G I ++APE M + S
Sbjct: 168 HKDLATRNVLVYDKLNVKISDLGLFREV-YAADYYKLLGNSLLPIRWMAPEAIMYGKFSI 226
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
D++S+G++L E+F+ GL+P G D+
Sbjct: 227 DSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 256
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 107/285 (37%), Gaps = 50/285 (17%)
Query: 203 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G FG VY G LF +A+K G R F+ E ++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWL-----H---GKDDTHWRLLNFDFLIKKK 307
+ V+ + ++++ + +G L E+L H G D D +K
Sbjct: 94 LLGVVT-----KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD-------DRTVKSA 141
Query: 308 LD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
L+ + +A ++YL + H +L NVL+ D++ + D + R +
Sbjct: 142 LEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 198
Query: 362 DEQTRFIGK--LNVRNFVKMALSQRVEEILNDFN-----LQEIEED--RTMCMHAXXXXX 412
D + +G L +R A+ I +D L E+ + C ++
Sbjct: 199 D-YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 257
Query: 413 XXXHVSIILECVNS----ICEIGVACSAERPRERMKLNDVESRLR 453
+L C + + + + C E P R + D+ SRLR
Sbjct: 258 EMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 67 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 112
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 113 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTT 166
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSCHAP-SSRRTTLSGTLDYLPPEMIEGRMHDEKVDL 190
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 191 WSLGVLCYEFLVGKPP 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 22/184 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 67 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 112
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI 368
++A AL Y H R+ H ++KP N+LL + DF + P + +T
Sbjct: 113 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTDLC 168
Query: 369 GKLN 372
G L+
Sbjct: 169 GTLD 172
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + D+ GT+ Y+ PE G D+
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 190
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 191 WSLGVLCYEFLVGKPP 206
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDD---EMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+ + + DFG++ T D +GT Y+APE G+
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEK 202
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDL 85
DV+S G++L + +G P G + D+
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKNEYDI 230
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 10/52 (19%)
Query: 300 FDFLIKKKLDIAIDVARALK-------YLHCDCQPRIAHCNLKPSNVLLDDE 344
FD +IK+K D AR +K Y+H + I H +LKP N+LL+ +
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESK 157
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 159 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 217 LGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 22/184 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 66 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 111
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI 368
++A AL Y H R+ H ++KP N+LL + DF + P + +T
Sbjct: 112 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTDLC 167
Query: 369 GKLN 372
G L+
Sbjct: 168 GTLD 171
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + D+ GT+ Y+ PE G D+
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 190 WSLGVLCYEFLVGKPP 205
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 223 WALGVLIYEMAAGYPP 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 159 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 217 LGVLIYEMAAGYPP 230
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L + + DFG+AR + ++ D + ++APE S+
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTK 281
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+S+G+LL E+F+ G P G+ D+
Sbjct: 282 SDVWSYGVLLWEIFSLGGSPYPGVQMDE 309
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGA---RSFKSECKAAINI-R 249
N ++IG GNFG V + DG + + + R F E + +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 250 HRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD--FLI--- 304
H NI+ + A +++G + A+ ++ P+G+L ++L R+L D F I
Sbjct: 82 HPNIINLLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKS-----RVLETDPAFAIANS 131
Query: 305 -------KKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARF 357
++ L A DVAR + YL Q + H NL N+L+ + + + DF ++R
Sbjct: 132 TASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRG 188
Query: 358 LPDTDEQTRFIGKLNVRNFVKMALSQRV 385
++T +G+L VR +L+ V
Sbjct: 189 QEVYVKKT--MGRLPVRWMAIESLNYSV 214
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG--TIGYVAPEYGMGSEVSSYG 58
H +L N+ + + A + DFG++R E MG + ++A E S ++
Sbjct: 162 HRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNS 219
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+S+G+LL E+ + G P GM
Sbjct: 220 DVWSYGVLLWEIVSLGGTPYCGM 242
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 HCDLKPSNVFLDD---EMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+ + + DFG++ T D +GT Y+APE G+
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEK 202
Query: 58 GDVYSFGILLLEMFTGLRPNNG 79
DV+S G++L + +G P G
Sbjct: 203 CDVWSAGVILYILLSGTPPFYG 224
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 10/52 (19%)
Query: 300 FDFLIKKKLDIAIDVARALK-------YLHCDCQPRIAHCNLKPSNVLLDDE 344
FD +IK+K D AR +K Y+H + I H +LKP N+LL+ +
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESK 157
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFID-VMGTIGYVAPEYGMGSEVSSYGD 59
H D+K N+ L+ E A L DFG+A L + + V+GT ++APE + D
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVAD 207
Query: 60 VYSFGILLLEMFTGLRP 76
++S GI +EM G P
Sbjct: 208 IWSLGITAIEMAEGKPP 224
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 27/169 (15%)
Query: 197 FSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVR 255
F +G G++GSVY + G +A+K E I+ +I++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIK-----------QVPVESDLQEIIKEISIMQ 79
Query: 256 VFTAVSGVDYQGARFK----AVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIA 311
+ V Y G+ FK +V ++ GS+ + + RL N + I
Sbjct: 80 QCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--------RLRNKTLTEDEIATIL 131
Query: 312 IDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPD 360
+ L+YLH R H ++K N+LL+ E + DF +A L D
Sbjct: 132 QSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG+A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLMIDQQGYIKVTDFGLAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLMIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA-RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H D+K +NV L ++ L DFG+A + + +GT ++APE S D
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKAD 198
Query: 60 VYSFGILLLEMFTGLRPNNGM 80
++S GI +E+ G PN+ +
Sbjct: 199 IWSLGITAIELAKGEPPNSDL 219
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 37/189 (19%)
Query: 192 DATNGFSSANLIGAGNFGSVYNGTLFDGTT---IAVKVFNLIRPGGARSF-KSECKAAIN 247
D F+ + IG G+FG VY G D T +A+K+ +L + E
Sbjct: 16 DPEELFTKLDRIGKGSFGEVYKG--IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQ 73
Query: 248 IRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKK 307
I R F + Y + ++ +++ GS D L
Sbjct: 74 CDSPYITRYFGS-----YLKSTKLWIIMEYLGGGS----------------ALDLLKPGP 112
Query: 308 LD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
L+ I ++ + L YLH + R H ++K +NVLL ++ + DF +A L DT
Sbjct: 113 LEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 169
Query: 362 D-EQTRFIG 369
++ F+G
Sbjct: 170 QIKRNXFVG 178
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G ++ D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDI 208
Query: 61 YSFGILLLEMFTG 73
+S G ++ E+ G
Sbjct: 209 WSVGCIMGELVKG 221
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 33/171 (19%)
Query: 212 YNGTLFDGTTIAVKVFNLIRPGGARSFKSECKA-----AINIRHRNIVRVF---TAVSGV 263
Y+ + D T +K + ++P G+ + C A IN+ + + R F T
Sbjct: 11 YSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRA 70
Query: 264 DYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
+ K V +K F P +LEE+ D + + D + + + + +D
Sbjct: 71 YRELVLLKCVNHKNIISLLNVFTPQKTLEEF----QDVYLVMELMDANLCQVIHMELDHE 126
Query: 316 R----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 22/184 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 71 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 116
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFI 368
++A AL Y H R+ H ++KP N+LL + DF + P + +T
Sbjct: 117 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTDLC 172
Query: 369 GKLN 372
G L+
Sbjct: 173 GTLD 176
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + D+ GT+ Y+ PE G D+
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 195 WSLGVLCYEFLVGKPP 210
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 HCDLKPSNVFLDD---EMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+ + + DFG++ T D +GT Y+APE G+
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEK 202
Query: 58 GDVYSFGILLLEMFTGLRPNNG 79
DV+S G++L + +G P G
Sbjct: 203 CDVWSAGVILYILLSGTPPFYG 224
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 34/151 (22%)
Query: 202 LIGAGNFGSVYN-GTLFDGTTIAVKVFNLI--RPGGARSFKSECKAAINIRHRNIVRVFT 258
++G G+FG V AVKV N + + E + + H NI+++F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 259 AVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARAL 318
+ + F +V + G L FD +IK+K D AR +
Sbjct: 89 ILE----DSSSF-YIVGELYTGGEL----------------FDEIIKRKRFSEHDAARII 127
Query: 319 K-------YLHCDCQPRIAHCNLKPSNVLLD 342
K Y+H + I H +LKP N+LL+
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLE 155
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSF--IDVMGTIGYVAPEYGMG-SEVSSY 57
H DLKP N+ D+ L DFG+ + G++ Y APE G S + S
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSE 190
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDD 84
DV+S GILL + G P F DD
Sbjct: 191 ADVWSMGILLYVLMCGFLP----FDDD 213
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 19/169 (11%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGG-ARSFKSECKAA 245
KD + + IG G F V + G +A+K+ + G K+E +A
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
N+RH++I +++ + + A +V ++ P G L +++ +D RL + +
Sbjct: 63 KNLRHQHICQLYHVL-----ETANKIFMVLEYCPGGELFDYIISQD----RLSEEETRV- 112
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
+ + A+ Y+H AH +LKP N+L D+ + DF +
Sbjct: 113 ----VFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGL 154
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA-RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H D+K +NV L + L DFG+A + + +GT ++APE S S D
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 201
Query: 60 VYSFGILLLEMFTGLRPNN 78
++S GI +E+ G P++
Sbjct: 202 IWSLGITAIELARGEPPHS 220
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 29/185 (15%)
Query: 192 DATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHR 251
D F+ IG G+FG V+ G D T V +I A + + I + +
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 76
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD-- 309
T G + + ++ +++ GS D L LD
Sbjct: 77 CDSPYVTKYYGSYLKDTKL-WIIMEYLGGGS----------------ALDLLEPGPLDET 119
Query: 310 ----IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD-EQ 364
I ++ + L YLH + + H ++K +NVLL + + DF +A L DT ++
Sbjct: 120 QIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176
Query: 365 TRFIG 369
F+G
Sbjct: 177 NXFVG 181
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA-RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H D+K +NV L + L DFG+A + + +GT ++APE S S D
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 60 VYSFGILLLEMFTGLRPNN 78
++S GI +E+ G P++
Sbjct: 187 IWSLGITAIELARGEPPHS 205
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 29/185 (15%)
Query: 192 DATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHR 251
D F+ IG G+FG V+ G D T V +I A + + I + +
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 61
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD-- 309
T G + + ++ +++ GS D L LD
Sbjct: 62 CDSPYVTKYYGSYLKDTKL-WIIMEYLGGGS----------------ALDLLEPGPLDET 104
Query: 310 ----IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD-EQ 364
I ++ + L YLH + + H ++K +NVLL + + DF +A L DT ++
Sbjct: 105 QIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 161
Query: 365 TRFIG 369
F+G
Sbjct: 162 NTFVG 166
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 245 LGVLIYEMAAGYPP 258
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 152 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WTLCGTPEYLAPEIILSKGYNKAVDWWA 209
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 210 LGVLIYEMAAGYPP 223
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGI-ARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H D+K N+ L + + L DFG A+ P ++ ++GT ++APE D
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 60 VYSFGILLLEMFTGLRP 76
++S GI+ +EM G P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGL 196
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 197 EADMWSIGVITYILLSGASP 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA-RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H D+K +NV L + L DFG+A + + +GT ++APE S S D
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 60 VYSFGILLLEMFTGLRPNN 78
++S GI +E+ G P++
Sbjct: 187 IWSLGITAIELARGEPPHS 205
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 29/185 (15%)
Query: 192 DATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHR 251
D F+ IG G+FG V+ G D T V +I A + + I + +
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 61
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD-- 309
T G + + ++ +++ GS D L LD
Sbjct: 62 CDSPYVTKYYGSYLKDTKL-WIIMEYLGGGS----------------ALDLLEPGPLDET 104
Query: 310 ----IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD-EQ 364
I ++ + L YLH + + H ++K +NVLL + + DF +A L DT ++
Sbjct: 105 QIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 161
Query: 365 TRFIG 369
F+G
Sbjct: 162 NXFVG 166
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPE------YGMGSEV 54
H D+KPSN+ LD L DFGI+ L + G Y+APE G +V
Sbjct: 149 HRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDV 208
Query: 55 SSYGDVYSFGILLLEMFTGLRP 76
S DV+S GI L E+ TG P
Sbjct: 209 RS--DVWSLGITLYELATGRFP 228
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
I + +AL +L + +I H ++KPSN+LLD + DF ++ L D+ +TR G
Sbjct: 130 ITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAG 187
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 245 LGVLIYEMAAGYPP 258
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL NV + D++ + D G+ R + + ++G I ++APE M + S
Sbjct: 151 HKDLATRNVLVYDKLNVKISDLGLFREV-YAADYYKLLGNSLLPIRWMAPEAIMYGKFSI 209
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
D++S+G++L E+F+ GL+P G D+
Sbjct: 210 DSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 239
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 107/285 (37%), Gaps = 50/285 (17%)
Query: 203 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G FG VY G LF +A+K G R F+ E ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWL-----H---GKDDTHWRLLNFDFLIKKK 307
+ V+ + ++++ + +G L E+L H G D D +K
Sbjct: 77 LLGVVT-----KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD-------DRTVKSA 124
Query: 308 LD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
L+ + +A ++YL + H +L NVL+ D++ + D + R +
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 362 DEQTRFIGK--LNVRNFVKMALSQRVEEILNDFN-----LQEIEED--RTMCMHAXXXXX 412
D + +G L +R A+ I +D L E+ + C ++
Sbjct: 182 D-YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 240
Query: 413 XXXHVSIILECVNS----ICEIGVACSAERPRERMKLNDVESRLR 453
+L C + + + + C E P R + D+ SRLR
Sbjct: 241 EMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 69 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 114
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
++A AL Y H R+ H ++KP N+LL + DF + P +
Sbjct: 115 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 193 WSLGVLCYEFLVGKPP 208
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 63 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 108
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 109 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 162
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 128 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 186
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 187 WSLGVLCYEFLVGKPP 202
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGI-ARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H D+K N+ L + + L DFG A+ P ++ ++GT ++APE D
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 60 VYSFGILLLEMFTGLRP 76
++S GI+ +EM G P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 14/160 (8%)
Query: 199 SANLIGAGNFGSVYNGTLFDGTT--IAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRV 256
S +IG G+FG VY+G D I + +L R + ++ + + +R N V
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
A+ G+ V+ +M +G L +++ R + +K + + VAR
Sbjct: 85 L-ALIGIMLPPEGLPHVLLPYMCHGDLLQFI--------RSPQRNPTVKDLISFGLQVAR 135
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
++YL + + H +L N +LD+ V DF +AR
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG------TIGYVAPEYGMGSEV 54
H DL N LD+ T + DFG+AR + ++ + V + + A E
Sbjct: 147 HRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHARLPVKWTALESLQTYRF 205
Query: 55 SSYGDVYSFGILLLEMFT 72
++ DV+SFG+LL E+ T
Sbjct: 206 TTKSDVWSFGVLLWELLT 223
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + IG+G +GSV FD T + V V L RP R+++ E
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 76
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 77 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 119
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGL 176
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 177 ARH--TDDEMTGYVA 189
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 153 HRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 210
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 211 IWSVGCIMAELLTG 224
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR--FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
DLK NV LD E L D+G+ + P +T+ GT Y+APE G + D
Sbjct: 146 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAPEILRGEDYGFSVDW 204
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 205 WALGVLMFEMMAGRSP 220
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGI-ARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H D+K N+ L + + L DFG A+ P ++ ++GT ++APE D
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVD 199
Query: 60 VYSFGILLLEMFTGLRP 76
++S GI+ +EM G P
Sbjct: 200 IWSLGIMAIEMIEGEPP 216
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLK N+ LD +M + DFG + G+ Y APE G + D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 60 VYSFGILLLEMFTGLRPNNG 79
V+S G++L + +G P +G
Sbjct: 196 VWSLGVILYTLVSGSLPFDG 215
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 203 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGARSFKSECKAAINIRHRNIVRVFTA 259
IG GNF V + G +AVK+ + + + E + + H NIV++F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
+ + + +V ++ G + ++L HG+ F + A
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----------QIVSA 125
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
++Y H Q I H +LK N+LLD +M + DF +
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLK N+ LD +M + DFG + G+ Y APE G + D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 60 VYSFGILLLEMFTGLRPNNG 79
V+S G++L + +G P +G
Sbjct: 196 VWSLGVILYTLVSGSLPFDG 215
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 203 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGARSFKSECKAAINIRHRNIVRVFTA 259
IG GNF V + G +AV++ + + + E + + H NIV++F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
+ + + +V ++ G + ++L HG+ F + A
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----------QIVSA 125
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
++Y H Q I H +LK N+LLD +M + DF +
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 197 FSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINIRHRN 252
F +G G FG+VY I A+KV L + G + E + ++RH N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 253 IVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAI 312
I+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 74 ILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSRFD--EQRTATYIT 119
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 120 ELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT 169
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G+ P
Sbjct: 194 WSLGVLCYEFLVGMPP 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 66 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 111
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
++A AL Y H R+ H ++KP N+LL + DF + P +
Sbjct: 112 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 161
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 190 WSLGVLCYEFLVGKPP 205
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV + + G IAVK L RP R+++ E
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK--KLSRPFQSIIHAKRTYR-E 100
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 101 LRLLKHMKHENVIGLLDV-----------------FTPATSLEEFNDVYLVTHLMGADLN 143
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 144 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 200
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 201 ARH--TDDEMTGYVA 213
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 177 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNMTVD 234
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 235 IWSVGCIMAELLTG 248
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 164 YRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIISKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLK N+ LD +M + DFG + G+ Y APE G + D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 60 VYSFGILLLEMFTGLRPNNG 79
V+S G++L + +G P +G
Sbjct: 196 VWSLGVILYTLVSGSLPFDG 215
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 203 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGARSFKSECKAAINIRHRNIVRVFTA 259
IG GNF V + G +AVK+ + + + E + + H NIV++F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
+ + + +V ++ G + ++L HG+ F + A
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----------QIVSA 125
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
++Y H Q I H +LK N+LLD +M + DF +
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 39/210 (18%)
Query: 174 PVYEEKQTINNLSF-KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIR 231
P+ +E+ T K +++ + + + +G+G +GSV FD T + V V L R
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSR 59
Query: 232 P-----GGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEW 286
P R+++ E + +++H N++ + F P SLEE+
Sbjct: 60 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEF 101
Query: 287 LHGKDDTHWRLLNFDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNV 339
TH + + ++K +KL + + R LKY+H I H +LKPSN+
Sbjct: 102 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 158
Query: 340 LLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
++++ + DF +AR DE T ++
Sbjct: 159 AVNEDCELKILDFGLARH--TDDEMTGYVA 186
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 207
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 208 IWSVGCIMAELLTG 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGAR--SFKSECKAAINIRHRNI 253
F ++G G FG V D A+K IR + + SE ++ H+ +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK---IRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 254 VRVFTA----------VSGVDYQGARFKAVVYKFMPNGSLEEWLHGKD-----DTHWRLL 298
VR + A + V + F + ++ N +L + +H ++ D +WRL
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLF--IQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 299 NFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ AL Y+H I H NLKP N+ +D+ +GDF +A+
Sbjct: 123 R-------------QILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK 164
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 16/85 (18%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIAR-------FLPVET--------SFIDVMGTIGYVA 45
H +LKP N+F+D+ +GDFG+A+ L +++ + +GT YVA
Sbjct: 139 HRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVA 198
Query: 46 PEYGMGS-EVSSYGDVYSFGILLLE 69
E G+ + D YS GI+ E
Sbjct: 199 TEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR--FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
DLK NV LD E L D+G+ + P +T+ GT Y+APE G + D
Sbjct: 178 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIAPEILRGEDYGFSVDW 236
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 237 WALGVLMFEMMAGRSP 252
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTA----HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D+ L DFG+A + F ++ GT +VAPE +
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 57 YGDVYSFGILLLEMFTGLRPNNGMFKDD 84
D++S G++ + +G P G K +
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQE 225
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 14/72 (19%)
Query: 300 FDFLIKKK-------LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEM--IGHVG 350
FDFL +K+ + + YLH +IAH +LKP N++L D+ I H+
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 351 --DFSMARFLPD 360
DF +A + D
Sbjct: 160 LIDFGLAHEIED 171
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 197 FSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINIRHRN 252
F +G G FG+VY I A+KV L + G + E + ++RH N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 253 IVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAI 312
I+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 74 ILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSRFD--EQRTATYIT 119
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H R+ H ++KP N+LL + DF + P + T
Sbjct: 120 ELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT 169
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGD 59
H D+KP N+ L + DFG + P +S D + GT+ Y+ PE G D
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAP--SSRRDTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 60 VYSFGILLLEMFTGLRP 76
++S G+L E G+ P
Sbjct: 193 LWSLGVLCYEFLVGMPP 209
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 69 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 114
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
++A AL Y H R+ H ++KP N+LL + DF + P +
Sbjct: 115 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + D+ GT+ Y+ PE G D+
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRDDLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 193 WSLGVLCYEFLVGKPP 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 69 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 114
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
++A AL Y H R+ H ++KP N+LL + DF + P +
Sbjct: 115 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 193 WSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 66 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 111
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
++A AL Y H R+ H ++KP N+LL + DF + P +
Sbjct: 112 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 161
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 190 WSLGVLCYEFLVGKPP 205
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 1 HCDLKPSNVF---LDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ LD++ + DFG+++ + GT GYVAPE S
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVAFFQEIEE 113
D +S G++ + G P F D+ N L + L +AE D ++ +I +
Sbjct: 199 VDCWSIGVIAYILLCGYPP----FYDE-NDAKLFEQIL--KAEYEFDSPYWDDISD 247
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 166 DLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 224 LGVLIYEMAAGYPP 237
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 1 HCDLKPSNVFLDDEM----TAHLGDFGIARFLPVETSFIDV-MGTIGYVAPEYGMGSEVS 55
H DLKPSN+ DE + + DFG A+ L E + T +VAPE
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYD 198
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
+ D++S G+LL TG P
Sbjct: 199 AACDIWSLGVLLYTXLTGYTP 219
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + + D + ++APE +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDE 249
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK-----------DDTHWRLLNF 300
N+V + A + G +V +F G+L +L K +D + L
Sbjct: 83 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 301 DFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLP 359
+ LI + VA+ +++L + H +L N+LL ++ + + DF +AR
Sbjct: 139 EHLIC----YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
Query: 360 DTDEQTRFIGKLNVRNFVKMALSQRVEEILND 391
D D + +L ++ + RV I +D
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 223
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLK N+ LD +M + DFG + G+ Y APE G + D
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 188
Query: 60 VYSFGILLLEMFTGLRPNNG 79
V+S G++L + +G P +G
Sbjct: 189 VWSLGVILYTLVSGSLPFDG 208
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 28/160 (17%)
Query: 203 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGARSFKSECKAAINIRHRNIVRVFTA 259
IG GNF V + G +AVK+ + + + E + + H NIV++F
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAI--DVA 315
+ + + +V ++ G + ++L HG W +K+K A +
Sbjct: 75 I-----ETEKTLYLVMEYASGGEVFDYLVAHG-----W--------MKEKEARAKFRQIV 116
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
A++Y H Q I H +LK N+LLD +M + DF +
Sbjct: 117 SAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVYS 62
DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D ++
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 63 FGILLLEMFTGLRP 76
G+L+ EM G P
Sbjct: 225 LGVLIYEMAAGYPP 238
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 1 HCDLKPSNVF---LDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ LD++ + DFG+++ + GT GYVAPE S
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVAFFQEIEE 113
D +S G++ + G P F D+ N L + L +AE D ++ +I +
Sbjct: 199 VDCWSIGVIAYILLCGYPP----FYDE-NDAKLFEQIL--KAEYEFDSPYWDDISD 247
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI-DVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP N+ + L DFG AR L + + D + T Y +PE +G + YG
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD--TQYGP 182
Query: 59 --DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSAL 95
DV++ G + E+ +G+ G K D++ L++ L
Sbjct: 183 PVDVWAIGCVFAELLSGVPLWPG--KSDVDQLYLIRKTL 219
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 78
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 79 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 121
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 178
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 179 ARH--TADEMTGYVA 191
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR E + + T Y APE + + D
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTADEMT--GYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 213 IWSVGCIMAELLTG 226
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + + D + ++APE +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDE 249
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK-----------DDTHWRLLNF 300
N+V + A + G V+ +F G+L +L K +D + L
Sbjct: 83 NVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 301 DFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLP 359
+ LI + VA+ +++L + H +L N+LL ++ + + DF +AR
Sbjct: 139 EHLIC----YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
Query: 360 DTDEQTRFIGKLNVRNFVKMALSQRVEEILND 391
D D + +L ++ + RV I +D
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 78
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 79 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 121
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 178
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 179 ARH--TADEMTGYVA 191
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR E + + T Y APE + + D
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTADEMT--GYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 213 IWSVGCIMAELLTG 226
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 1 HCDLKPSNVF---LDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ LD++ + DFG+++ + GT GYVAPE S
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVAFFQEIEE 113
D +S G++ + G P F D+ N L + L +AE D ++ +I +
Sbjct: 199 VDCWSIGVIAYILLCGYPP----FYDE-NDAKLFEQIL--KAEYEFDSPYWDDISD 247
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR--FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
DLK NV LD E L D+G+ + P +T+ GT Y+APE G + D
Sbjct: 131 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAPEILRGEDYGFSVDW 189
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 190 WALGVLMFEMMAGRSP 205
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP+N+FL LGDFG+ L + G Y+APE GS + DV
Sbjct: 180 HLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGS-YGTAADV 238
Query: 61 YSFGILLLEM 70
+S G+ +LE+
Sbjct: 239 FSLGLTILEV 248
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + + D + ++APE +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDE 258
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK-----------DDTHWRLLNF 300
N+V + A + G +V +F G+L +L K +D + L
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 301 DFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLP 359
+ LI + VA+ +++L + H +L N+LL ++ + + DF +AR
Sbjct: 148 EHLIC----YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 360 DTDEQTRFIGKLNVRNFVKMALSQRVEEILND 391
D D + +L ++ + RV I +D
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 232
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR--FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
DLK NV LD E L D+G+ + P +T+ GT Y+APE G + D
Sbjct: 135 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAPEILRGEDYGFSVDW 193
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 194 WALGVLMFEMMAGRSP 209
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 78
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 79 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 121
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 178
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 179 ARH--TADEMTGYVA 191
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR E + + T Y APE + + D
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTADEMT--GYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 213 IWSVGCIMAELLTG 226
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + + D + ++APE +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDE 258
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 92
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK----------DDTHWRLLNFD 301
N+V + A + G +V +F G+L +L K +D + L +
Sbjct: 93 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLE 148
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLPD 360
LI + VA+ +++L + H +L N+LL ++ + + DF +AR D
Sbjct: 149 HLIC----YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 361 TDEQTRFIGKLNVRNFVKMALSQRVEEILND 391
D + +L ++ + RV I +D
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSD 232
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGD 59
H DLK N+FL++++ +GDFG+A + + + GT Y+APE S D
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 60 VYSFGILLLEMFTGLRP 76
V+S G ++ + G P
Sbjct: 200 VWSIGCIMYTLLVGKPP 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDV-MGTIGYVAPEYGMGSEVSS 56
H DLKP N+ DE + + DFG AR P + + T+ Y APE +
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDE 188
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++L M +G P
Sbjct: 189 SCDLWSLGVILYTMLSGQVP 208
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGD 59
H DLK N+FL++++ +GDFG+A + + + GT Y+APE S D
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 203
Query: 60 VYSFGILLLEMFTGLRP 76
V+S G ++ + G P
Sbjct: 204 VWSIGCIMYTLLVGKPP 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA-RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H D+K +NV L + L DFG+A + + +GT ++APE S S D
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 206
Query: 60 VYSFGILLLEMFTGLRPNN 78
++S GI +E+ G P++
Sbjct: 207 IWSLGITAIELARGEPPHS 225
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 184 NLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECK 243
NL F+ + D F+ IG G+FG V+ G D T V +I A + +
Sbjct: 17 NLYFQSM-DPEELFTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQ 73
Query: 244 AAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFL 303
I + + T G + + ++ +++ GS D L
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKL-WIIMEYLGGGS----------------ALDLL 116
Query: 304 IKKKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARF 357
LD I ++ + L YLH + + H ++K +NVLL + + DF +A
Sbjct: 117 EPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQ 173
Query: 358 LPDTD-EQTRFIG 369
L DT ++ F+G
Sbjct: 174 LTDTQIKRNTFVG 186
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+APE + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ +M G P
Sbjct: 222 WALGVLIYQMAAGYPP 237
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTA----HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D+ L DFG+A + F ++ GT +VAPE +
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 57 YGDVYSFGILLLEMFTGLRPNNGMFKDD 84
D++S G++ + +G P G K +
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQE 225
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 300 FDFLIKKK-------LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEM--IGHVG 350
FDFL +K+ + + YLH +IAH +LKP N++L D+ I H+
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 351 --DFSMARFLPDTDEQTRFIG 369
DF +A + D E G
Sbjct: 160 LIDFGLAHEIEDGVEFKNIFG 180
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 209 WSVGCIMGEM 218
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 115 NIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGD 59
H DLK N+FL++++ +GDFG+A + + + GT Y+APE S D
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 60 VYSFGILLLEMFTGLRP 76
V+S G ++ + G P
Sbjct: 200 VWSIGCIMYTLLVGKPP 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 147 HRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDI 206
Query: 61 YSFGILLLEMFTG 73
+S G ++ E+ G
Sbjct: 207 WSVGCIMGELVKG 219
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 33/171 (19%)
Query: 212 YNGTLFDGTTIAVKVFNLIRPGGARSFKSECKA-----AINIRHRNIVRVF---TAVSGV 263
Y+ + D T +K + ++P G+ + C A IN+ + + R F T
Sbjct: 9 YSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRA 68
Query: 264 DYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
+ K V +K F P +LEE+ D + + D + + + + +D
Sbjct: 69 YRELVLLKCVNHKNIISLLNVFTPQKTLEEF----QDVYLVMELMDANLCQVIHMELDHE 124
Query: 316 R----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 125 RMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTA----HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D+ L DFG+A + F ++ GT +VAPE +
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 57 YGDVYSFGILLLEMFTGLRPNNGMFKDD 84
D++S G++ + +G P G K +
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQE 225
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 300 FDFLIKKK-------LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEM--IGHVG 350
FDFL +K+ + + YLH +IAH +LKP N++L D+ I H+
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 351 --DFSMARFLPDTDEQTRFIG 369
DF +A + D E G
Sbjct: 160 LIDFGLAHEIEDGVEFKNIFG 180
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 76
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 77 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 119
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGL 176
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 177 ARH--TDDEMTGYVA 189
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 153 HRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 210
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 211 IWSVGCIMAELLTG 224
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 82
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 83 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 125
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 126 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGL 182
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 183 ARH--TDDEMTGYVA 195
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 159 HRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 216
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 217 IWSVGCIMAELLTG 230
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVK-VFNLIRPGGARSFKSECKAAIN 247
+Y+ ++ F +L+G G +G V + T G +A+K + +P A E K +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 248 IRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKK 307
+H NI+ +F ++ ++ + M + D H R+++ L
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELM-----------QTDLH-RVISTQMLSDDH 113
Query: 308 LDIAI-DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ I RA+K LH + H +LKPSN+L++ V DF +AR +
Sbjct: 114 IQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL---------PV--ETSFIDVMGTIGYVAPEYG 49
H DLKPSN+ ++ + DFG+AR + P ++ + + T Y APE
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVM 194
Query: 50 MGS-EVSSYGDVYSFGILLLEMF 71
+ S + S DV+S G +L E+F
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELF 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTA----HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D+ L DFG+A + F ++ GT +VAPE +
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 57 YGDVYSFGILLLEMFTGLRPNNGMFKDD 84
D++S G++ + +G P G K +
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQE 225
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 300 FDFLIKKK-------LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEM--IGHVG 350
FDFL +K+ + + YLH +IAH +LKP N++L D+ I H+
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 351 --DFSMARFLPDTDEQTRFIG 369
DF +A + D E G
Sbjct: 160 LIDFGLAHEIEDGVEFKNIFG 180
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTA----HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D+ L DFG+A + F ++ GT +VAPE +
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 57 YGDVYSFGILLLEMFTGLRPNNGMFKDD 84
D++S G++ + +G P G K +
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQE 225
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 300 FDFLIKKK-------LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEM--IGHVG 350
FDFL +K+ + + YLH +IAH +LKP N++L D+ I H+
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 351 --DFSMARFLPDTDEQTRFIG 369
DF +A + D E G
Sbjct: 160 LIDFGLAHEIEDGVEFKNIFG 180
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 196
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 197 EADMWSIGVITYILLSGASP 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVK-VFNLIRPGGARSFKSECKAAIN 247
+Y+ ++ F +L+G G +G V + T G +A+K + +P A E K +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 248 IRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKK 307
+H NI+ +F ++ ++ + M + D H R+++ L
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELM-----------QTDLH-RVISTQMLSDDH 113
Query: 308 LDIAI-DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ I RA+K LH + H +LKPSN+L++ V DF +AR +
Sbjct: 114 IQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL---------PV--ETSFIDVMGTIGYVAPEYG 49
H DLKPSN+ ++ + DFG+AR + P ++ ++ + T Y APE
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVM 194
Query: 50 MGS-EVSSYGDVYSFGILLLEMF 71
+ S + S DV+S G +L E+F
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELF 217
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIAR-FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H DLKP+N+ LD+ L DFG+A+ F ++ + T Y APE G+ + G
Sbjct: 135 HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGV 194
Query: 59 DVYSFGILLLEMF 71
D+++ G +L E+
Sbjct: 195 DMWAVGCILAELL 207
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 27/176 (15%)
Query: 189 DLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT---IAVKVFNL-----IRPGGARSFKS 240
D+ + + +G G F +VY D T +A+K L + G R+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKAR--DKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 241 ECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNF 300
E K + H NI+ + A + ++V+ FM LE + KD++ L+
Sbjct: 62 EIKLLQELSHPNIIGLLDA-----FGHKSNISLVFDFM-ETDLEVII--KDNS---LVLT 110
Query: 301 DFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
IK + + + + L+YLH Q I H +LKP+N+LLD+ + + DF +A+
Sbjct: 111 PSHIKAYMLMTL---QGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNAMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 209 WSVGCIMGEM 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 1 HCDLKPSNVF---LDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ LD++ + DFG+++ + GT GYVAPE S
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVAFFQEIEE 113
D +S G++ + G P F D+ N L + L +AE D ++ +I +
Sbjct: 199 VDCWSIGVIAYILLCGYPP----FYDE-NDAKLFEQIL--KAEYEFDSPYWDDISD 247
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 209 WSVGCIMGEM 218
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 33/171 (19%)
Query: 212 YNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---TAVSGV 263
Y+ + D T +K + ++P G+ + C A + RN+ R F T
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 70
Query: 264 DYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
+ K V +K F P +LEE+ D + + D + + + + +D
Sbjct: 71 YRELVLMKCVNHKNIISLLNVFTPQKTLEEF----QDVYLVMELMDANLXQVIQMELDHE 126
Query: 316 R----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 127 RMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 142 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 201
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 202 WSVGCIMGEM 211
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 33/171 (19%)
Query: 212 YNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---TAVSGV 263
Y+ + D T +K + ++P G+ + C A + RN+ R F T
Sbjct: 4 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 63
Query: 264 DYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
+ K V +K F P +LEE+ D + + D + + + + +D
Sbjct: 64 YRELVLMKCVNHKNIISLLNVFTPQKTLEEF----QDVYLVMELMDANLXQVIQMELDHE 119
Query: 316 R----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 120 RMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + + D + ++APE +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDE 258
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 35/210 (16%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK---------DDTHWRLLNFDF 302
N+V + A + G +V +F G+L +L K +D + L +
Sbjct: 94 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEH 149
Query: 303 LIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLPDT 361
LI + VA+ +++L + H +L N+LL ++ + + DF +AR D
Sbjct: 150 LIX----YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 362 DEQTRFIGKLNVRNFVKMALSQRVEEILND 391
D + +L ++ + RV I +D
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSD 232
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 209 WSVGCIMGEM 218
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 45/177 (25%)
Query: 197 FSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFNLIRP----GGARSFKSECKAAINIR 249
+ + IG+G G V Y+ L +A+K L RP A+ E +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 250 HRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD 309
H+NI+ + F P +LEE+ D + + D + + +
Sbjct: 82 HKNIISLLNV-----------------FTPQKTLEEF----QDVYLVMELMDANLXQVIQ 120
Query: 310 IAIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ +D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 121 MELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLK N+ LD +M + DFG + G Y APE G + D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVD 195
Query: 60 VYSFGILLLEMFTGLRPNNG 79
V+S G++L + +G P +G
Sbjct: 196 VWSLGVILYTLVSGSLPFDG 215
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 203 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGARSFKSECKAAINIRHRNIVRVFTA 259
IG GNF V + G +AVK+ + + + E + + H NIV++F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
+ + + +V ++ G + ++L HG+ F + A
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----------QIVSA 125
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
++Y H Q I H +LK N+LLD +M + DF +
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVK-VFNLIRPGGARSFKSECKAAIN 247
+Y+ ++ F +L+G G +G V + T G +A+K + +P A E K +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 248 IRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKK 307
+H NI+ +F ++ ++ + M + D H R+++ L
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELM-----------QTDLH-RVISTQMLSDDH 113
Query: 308 LDIAI-DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ I RA+K LH + H +LKPSN+L++ V DF +AR +
Sbjct: 114 IQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL---------PV--ETSFIDVMGTIGYVAPEYG 49
H DLKPSN+ ++ + DFG+AR + P ++ + + T Y APE
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVM 194
Query: 50 MGS-EVSSYGDVYSFGILLLEMF 71
+ S + S DV+S G +L E+F
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELF 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 77
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 78 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 120
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGL 177
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 178 ARH--TDDEMTGYVA 190
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 154 HRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 212 IWSVGCIMAELLTG 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL--PVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL SN+ L M + DFG+A L P E + + GT Y++PE S
Sbjct: 135 HRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSAHGLES 193
Query: 59 DVYSFGILLLEMFTGLRP-NNGMFKDDLNLPNLVKSALPA 97
DV+S G + + G P + K+ LN L +P+
Sbjct: 194 DVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS 233
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 197 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFN---LIRPGGARSFKSECKAAINIRHRN 252
F NL+G G+F VY ++ G +A+K+ + + + G + ++E K ++H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 253 IVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAI 312
I+ ++ ++ + + +V + NG + +L + F +
Sbjct: 73 ILELYNY-----FEDSNYVYLVLEMCHNGEMNRYLKNRVKP--------FSENEARHFMH 119
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
+ + YLH I H +L SN+LL M + DF +A L E+
Sbjct: 120 QIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK 168
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N + ++ T +GDFG+ R + ET + G + +++PE ++
Sbjct: 152 HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTT 210
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
Y DV+SFG++L E+ T +P G+
Sbjct: 211 YSDVWSFGVVLWEIATLAEQPYQGL 235
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G T +A+K N R F +E ++VR
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS QG + V+ + M G L+ +L + + + + K + +A ++
Sbjct: 84 LLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 138
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + + H +L N ++ ++ +GDF M R + +TD
Sbjct: 139 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N + ++ T +GDFG+ R + ET + G + +++PE ++
Sbjct: 151 HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTT 209
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
Y DV+SFG++L E+ T +P G+
Sbjct: 210 YSDVWSFGVVLWEIATLAEQPYQGL 234
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G T +A+K N R F +E ++VR
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFL----IKKKLDIA 311
+ VS QG + V+ + M G L+ +L + N L + K + +A
Sbjct: 83 LLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPA---MANNPVLAPPSLSKMIQMA 134
Query: 312 IDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
++A + YL+ + + H +L N ++ ++ +GDF M R + +TD
Sbjct: 135 GEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR-FLPVETS-FIDVMGTIGYVAPEYGMGSEVS--SYG 58
D+K N+ LD L DFG+++ F+ ET D GTI Y+AP+ G +
Sbjct: 184 DIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAV 243
Query: 59 DVYSFGILLLEMFTGLRP 76
D +S G+L+ E+ TG P
Sbjct: 244 DWWSLGVLMYELLTGASP 261
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 194 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGA---RSFKSECKAAINIR 249
T F IG+G FGSV+ DG A+K G + + A+ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 250 HRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD 309
H ++VR F+A + D+ + ++ GSL + + ++R++++ F + D
Sbjct: 68 HSHVVRYFSAWAEDDHM-----LIQNEYCNGGSLADAI----SENYRIMSY-FKEAELKD 117
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLL 341
+ + V R L+Y+H + H ++KPSN+ +
Sbjct: 118 LLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEYGMGSEVSSY 57
H DL N+ L ++ + DFG+AR + + + D + ++APE +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+SFG+LL E+F+ G P G+ D+
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDE 258
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 203 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGA----RSFKSECKAAINIRHR- 251
+G G FG V F D T T+AVK +++ G R+ SE K I+I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 252 NIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK-----------DDTHWRLLNF 300
N+V + A + G +V +F G+L +L K +D + L
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 301 DFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR-FLP 359
+ LI + VA+ +++L + H +L N+LL ++ + + DF +AR
Sbjct: 148 EHLIC----YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 200
Query: 360 DTDEQTRFIGKLNVRNFVKMALSQRVEEILND 391
D D + +L ++ + RV I +D
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 232
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N + ++ T +GDFG+ R + ET + G + +++PE ++
Sbjct: 154 HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTT 212
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
Y DV+SFG++L E+ T +P G+
Sbjct: 213 YSDVWSFGVVLWEIATLAEQPYQGL 237
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G T +A+K N R F +E ++VR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS QG + V+ + M G L+ +L + + + + K + +A ++
Sbjct: 86 LLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + + H +L N ++ ++ +GDF M R + +TD
Sbjct: 141 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 210 WSVGCIMGEM 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 148 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 207
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 208 WSVGCIMGEM 217
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 209 WSVGCIMGEM 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ D + H + DFG+A + + GT Y+APE +V+
Sbjct: 147 HKDLKPENILFQD-TSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV-FKRDVTF 204
Query: 57 YGDVYSFGILLLEMFTGLRPNNG 79
D++S G+++ + TG P G
Sbjct: 205 KCDIWSAGVVMYFLLTGCLPFTG 227
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 1 HCDLKPSNVFLDD---EMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ + + DFG+++ + + V GT GY APE G
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPE 230
Query: 58 GDVYSFGILLLEMFTGLRP------NNGMFKDDLN 86
D++S GI+ + G P + MF+ LN
Sbjct: 231 VDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN 265
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 73
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 74 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 116
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 117 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGL 173
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 174 ARH--TDDEMTGYVA 186
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 150 HRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 207
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 208 IWSVGCIMAELLTG 221
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 196
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 197 EADMWSIGVITYILLSGASP 216
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N + ++ T +GDFG+ R + ET + G + +++PE ++
Sbjct: 154 HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTT 212
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
Y DV+SFG++L E+ T +P G+
Sbjct: 213 YSDVWSFGVVLWEIATLAEQPYQGL 237
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G T +A+K N R F +E ++VR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS QG + V+ + M G L+ +L + + + + K + +A ++
Sbjct: 86 LLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + + H +L N ++ ++ +GDF M R + +TD
Sbjct: 141 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 196
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 197 EADMWSIGVITYILLSGASP 216
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + ++ T +GDFG+ R + ET + G + +++PE ++
Sbjct: 161 HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTT 219
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
Y DV+SFG++L E+ T +P G+
Sbjct: 220 YSDVWSFGVVLWEIATLAEQPYQGL 244
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G T +A+K N R F +E ++VR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS QG + V+ + M G L+ +L + + + + K + +A ++
Sbjct: 93 LLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 147
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + + H +L N ++ ++ +GDF M R + +TD
Sbjct: 148 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 202
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 203 WSVGCIMGEM 212
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 194 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGA---RSFKSECKAAINIR 249
T F IG+G FGSV+ DG A+K G + + A+ +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 250 HRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD 309
H ++VR F+A + D+ + ++ GSL + + ++R++++ F + D
Sbjct: 66 HSHVVRYFSAWAEDDHM-----LIQNEYCNGGSLADAI----SENYRIMSY-FKEAELKD 115
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLL 341
+ + V R L+Y+H + H ++KPSN+ +
Sbjct: 116 LLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 78
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 79 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 121
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 178
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 179 ARH--TDDEMTGYVA 191
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 213 IWSVGCIMAELLTG 226
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 209 WSVGCIMGEM 218
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 76
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 77 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 119
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 176
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 177 ARH--TDDEMTGYVA 189
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 153 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 210
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 211 IWSVGCIMAELLTG 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 70
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 71 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 113
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 114 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 170
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 171 ARH--TDDEMTGYVA 183
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 147 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 204
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 205 IWSVGCIMAELLTG 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 115 NIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 194 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGA---RSFKSECKAAINIR 249
T F IG+G FGSV+ DG A+K G + + A+ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 250 HRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD 309
H ++VR F+A + D+ + ++ GSL + + ++R++++ F + D
Sbjct: 68 HSHVVRYFSAWAEDDHM-----LIQNEYCNGGSLADAI----SENYRIMSY-FKEAELKD 117
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLL 341
+ + V R L+Y+H + H ++KPSN+ +
Sbjct: 118 LLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 210 WSVGCIMGEM 219
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 194 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGA---RSFKSECKAAINIR 249
T F IG+G FGSV+ DG A+K G + + A+ +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 250 HRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD 309
H ++VR F+A + D+ + ++ GSL + + ++R++++ F + D
Sbjct: 70 HSHVVRYFSAWAEDDHM-----LIQNEYCNGGSLADAI----SENYRIMSY-FKEAELKD 119
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLL 341
+ + V R L+Y+H + H ++KPSN+ +
Sbjct: 120 LLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + ++ T +GDFG+ R + ET + G + +++PE ++
Sbjct: 161 HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTT 219
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
Y DV+SFG++L E+ T +P G+
Sbjct: 220 YSDVWSFGVVLWEIATLAEQPYQGL 244
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 203 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G T +A+K N R F +E ++VR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFL----IKKKLDIA 311
+ VS QG + V+ + M G L+ +L + N L + K + +A
Sbjct: 93 LLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPA---MANNPVLAPPSLSKMIQMA 144
Query: 312 IDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
++A + YL+ + + H +L N ++ ++ +GDF M R + +TD
Sbjct: 145 GEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Query: 1 HCDLKPSNVFL---DDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ D+E + DFG+++ GT GYVAPE S
Sbjct: 143 HRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKA 202
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVAFFQEIEE 113
D +S G++ + G P F D+ N L + L +AE D ++ +I +
Sbjct: 203 VDCWSIGVIAYILLCGYPP----FYDE-NDSKLFEQIL--KAEYEFDSPYWDDISD 251
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N + ++ T +GDFG+ R + ET + G + +++PE ++
Sbjct: 148 HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTT 206
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
Y DV+SFG++L E+ T +P G+
Sbjct: 207 YSDVWSFGVVLWEIATLAEQPYQGL 231
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G T +A+K N R F +E ++VR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS QG + V+ + M G L+ +L + + + + K + +A ++
Sbjct: 80 LLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + + H +L N ++ ++ +GDF M R + +TD
Sbjct: 135 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N+ L + DFG+AR + +++++ V G + ++APE +
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARHIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTF 249
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+S+GI L E+F+ G P GM D
Sbjct: 250 ESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 98/267 (36%), Gaps = 65/267 (24%)
Query: 169 KLLKTPVYEEKQTI------NNLSFKDL----YD-----ATNGFSSANLIGAGNFGSVYN 213
K L+ P+YE + + NN + D YD N S +GAG FG V
Sbjct: 5 KYLQKPMYEVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVE 64
Query: 214 GTLFD------GTTIAVKVFNLIRPGGARSFKSECKAAINI-----RHRNIVRVFTAVSG 262
T + T+AVK +++P + + + + + H NIV + A +
Sbjct: 65 ATAYGLIKSDAAMTVAVK---MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT- 120
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKK--------------- 307
G V+ ++ G L +L K D+ F+ K
Sbjct: 121 --IGGPTL--VITEYCCYGDLLNFLRRKRDS--------FICSKTSPAIMEDDELALDLE 168
Query: 308 --LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
L + VA+ + +L H +L N+LL I + DF +AR + + +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKN---DS 222
Query: 366 RFIGKLNVRNFVKMALSQRVEEILNDF 392
++ K N R VK + + + F
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTF 249
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 94
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 95 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 137
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 138 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 194
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 195 ARH--TDDEMTGYVA 207
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 171 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 228
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 229 IWSVGCIMAELLTG 242
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 202
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 203 WSVGCIMGEM 212
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N + ++ T +GDFG+ R + ET + G + +++PE ++
Sbjct: 155 HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTT 213
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
Y DV+SFG++L E+ T +P G+
Sbjct: 214 YSDVWSFGVVLWEIATLAEQPYQGL 238
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G T +A+K N R F +E ++VR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS QG + V+ + M G L+ +L + + + + K + +A ++
Sbjct: 87 LLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + + H +L N ++ ++ +GDF M R + +TD
Sbjct: 142 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 73
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 74 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 116
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 117 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 173
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 174 ARH--TDDEMTGYVA 186
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 207
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 208 IWSVGCIMAELLTG 221
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 1 HCDLKPSNVFLDDEMTA----HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D+ L DFG+A + F ++ GT +VAPE +
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 57 YGDVYSFGILLLEMFTGLRPNNGMFKDD 84
D++S G++ + +G P G K +
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQE 225
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 300 FDFLIKKK-------LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEM--IGHVG 350
FDFL +K+ + + YLH +IAH +LKP N++L D+ I H+
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 351 --DFSMARFLPDTDEQTRFIG 369
DF +A + D E G
Sbjct: 160 LIDFGLAHEIEDGVEFKNIFG 180
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 142 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 201
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 202 WSVGCIMGEM 211
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGA---RSFKSECKAAINI-R 249
N ++IG GNFG V + DG + + + R F E + +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 250 HRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD--FLI--- 304
H NI+ + A +++G + A+ Y P+G+L ++L R+L D F I
Sbjct: 75 HPNIINLLGAC---EHRGYLYLAIEYA--PHGNLLDFLRKS-----RVLETDPAFAIANS 124
Query: 305 -------KKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARF 357
++ L A DVAR + YL Q + H +L N+L+ + + + DF ++R
Sbjct: 125 TASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRG 181
Query: 358 LPDTDEQTRFIGKLNVRNFVKMALSQRV 385
++T +G+L VR +L+ V
Sbjct: 182 QEVYVKKT--MGRLPVRWMAIESLNYSV 207
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG--TIGYVAPEYGMGSEVSSYG 58
H DL N+ + + A + DFG++R E MG + ++A E S ++
Sbjct: 155 HRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNS 212
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+S+G+LL E+ + G P GM
Sbjct: 213 DVWSYGVLLWEIVSLGGTPYCGM 235
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 77
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 78 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 120
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 177
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 178 ARH--TDDEMTGYVA 190
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 212 IWSVGCIMAELLTG 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N + ++ T +GDFG+ R + ET + G + +++PE ++
Sbjct: 183 HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTT 241
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
Y DV+SFG++L E+ T +P G+
Sbjct: 242 YSDVWSFGVVLWEIATLAEQPYQGL 266
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G T +A+K N R F +E ++VR
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS QG + V+ + M G L+ +L + + + + K + +A ++
Sbjct: 115 LLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 169
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + + H +L N ++ ++ +GDF M R + +TD
Sbjct: 170 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 214
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLKP N+ LD+ + + DFG++ + G+ Y APE G + D
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVD 194
Query: 60 VYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKS 93
V+S G++L M P DD ++P L K+
Sbjct: 195 VWSCGVILYVMLCRRLPF-----DDESIPVLFKN 223
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 197 FSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFN---LIRPGGARSFKSECKAAINIRH 250
+ +G G+FG V Y+ T G +A+K+ N L + + E +RH
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 72
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+I++++ + D + ++ L +++ +D + F
Sbjct: 73 PHIIKLYDVIKSKD------EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ------- 119
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPD 360
+ A++Y H + +I H +LKP N+LLD+ + + DF ++ + D
Sbjct: 120 --QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 195
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 196 EADMWSIGVITYILLSGASP 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLKP N+ LD+ + + DFG++ + G+ Y APE G + D
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVD 195
Query: 60 VYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKS 93
V+S G++L M P DD ++P L K+
Sbjct: 196 VWSCGVILYVMLCRRLPF-----DDESIPVLFKN 224
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 197 FSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFN---LIRPGGARSFKSECKAAINIRH 250
+ +G G+FG V Y+ T G +A+K+ N L + + E +RH
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 73
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+I++++ + D + ++ L +++ +D + F
Sbjct: 74 PHIIKLYDVIKSKD------EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ------- 120
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPD 360
+ A++Y H + +I H +LKP N+LLD+ + + DF ++ + D
Sbjct: 121 --QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 165
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 246
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 247 WSVGCIMGEM 256
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGA---RSFKSECKAAINI-R 249
N ++IG GNFG V + DG + + + R F E + +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 250 HRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD--FLI--- 304
H NI+ + A +++G + A+ Y P+G+L ++L R+L D F I
Sbjct: 85 HPNIINLLGAC---EHRGYLYLAIEYA--PHGNLLDFLRKS-----RVLETDPAFAIANS 134
Query: 305 -------KKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARF 357
++ L A DVAR + YL Q + H +L N+L+ + + + DF ++R
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRG 191
Query: 358 LPDTDEQTRFIGKLNVRNFVKMALSQRV 385
++T +G+L VR +L+ V
Sbjct: 192 QEVYVKKT--MGRLPVRWMAIESLNYSV 217
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG--TIGYVAPEYGMGSEVSSYG 58
H DL N+ + + A + DFG++R E MG + ++A E S ++
Sbjct: 165 HRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNS 222
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV+S+G+LL E+ + G P GM
Sbjct: 223 DVWSYGVLLWEIVSLGGTPYCGM 245
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 73
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 74 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 116
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 117 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 173
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 174 ARH--TDDEMTGYVA 186
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 207
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 208 IWSVGCIMAELLTG 221
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 196
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 197 EADMWSIGVITYILLSGASP 216
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLKP N+ LD+ + + DFG++ + G+ Y APE G + D
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVD 185
Query: 60 VYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKS 93
V+S G++L M P DD ++P L K+
Sbjct: 186 VWSCGVILYVMLCRRLPF-----DDESIPVLFKN 214
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 197 FSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFN---LIRPGGARSFKSECKAAINIRH 250
+ +G G+FG V Y+ T G +A+K+ N L + + E +RH
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+I++++ + D + ++ L +++ +D + F
Sbjct: 64 PHIIKLYDVIKSKD------EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ------- 110
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPD 360
+ A++Y H + +I H +LKP N+LLD+ + + DF ++ + D
Sbjct: 111 --QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 155
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 82
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 83 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 125
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 126 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 182
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 183 ARH--TDDEMTGYVA 195
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 159 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 216
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 217 IWSVGCIMAELLTG 230
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 91
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 92 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 134
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 135 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 191
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 192 ARH--TDDEMTGYVA 204
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 225
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 226 IWSVGCIMAELLTG 239
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 246
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 247 WSVGCIMGEM 256
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 195
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 196 EADMWSIGVITYILLSGASP 215
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 83
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 84 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 126
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 127 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 183
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 184 ARH--TDDEMTGYVA 196
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 217
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 218 IWSVGCIMAELLTG 231
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 196
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 197 EADMWSIGVITYILLSGASP 216
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 83
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 84 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 126
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 127 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 183
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 184 ARH--TDDEMTGYVA 196
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 217
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 218 IWSVGCIMAELLTG 231
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 196
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 197 EADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 196
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 197 EADMWSIGVITYILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 196
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 197 EADMWSIGVITYILLSGASP 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 90
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 91 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 133
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 134 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 190
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 191 ARH--TDDEMTGYVA 203
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 224
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 225 IWSVGCIMAELLTG 238
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 196
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 197 EADMWSIGVITYILLSGASP 216
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 193 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINI 248
A F +G G FG+VY + I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
RH NI+R++ G + R ++ ++ P G++ L +L FD ++
Sbjct: 66 RHPNILRLY----GYFHDSTRV-YLILEYAPLGTVYRELQ-------KLSKFD--EQRTA 111
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
++A AL Y H ++ H ++KP N+LL + DF + P +
Sbjct: 112 TYITELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 161
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + DFG + P + + GT+ Y+ PE G D+
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 61 YSFGILLLEMFTGLRP 76
+S G+L E G P
Sbjct: 190 WSLGVLCYEFLVGKPP 205
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 77
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 78 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 120
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 177
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 178 ARH--TDDEMTGYVA 190
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 212 IWSVGCIMAELLTG 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 76
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 77 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 119
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 176
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 177 ARH--TDDEMTGYVA 189
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 153 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 210
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 211 IWSVGCIMAELLTG 224
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N + ++ T +GDFG+ R + ET + G + +++PE ++
Sbjct: 148 HRDLAARNCXVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTT 206
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
Y DV+SFG++L E+ T +P G+
Sbjct: 207 YSDVWSFGVVLWEIATLAEQPYQGL 231
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G T +A+K N R F +E ++VR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS QG + V+ + M G L+ +L + + + + K + +A ++
Sbjct: 80 LLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + + H +L N + ++ +GDF M R + +TD
Sbjct: 135 ADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD 179
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL NV + + DFG+AR + +++++ V G + ++APE +
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV-VRGNARLPVKWMAPESLFEGIYTI 253
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDLNLPNLVKSAL 95
DV+S+GILL E+F+ G+ P G+ D N L+++
Sbjct: 254 KSDVWSYGILLWEIFSLGVNPYPGI-PVDANFYKLIQNGF 292
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 48/235 (20%)
Query: 191 YDATNGFSSANL-----IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGA---RSF 238
YD F NL +G+G FG V N T + G +I V V L + +
Sbjct: 36 YDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREAL 95
Query: 239 KSECKAAINI-RHRNIVRVFTA--VSGVDYQGARFKAVVYKFMPNGSLEEWLHGK----- 290
SE K + H NIV + A +SG Y +++++ G L +L K
Sbjct: 96 MSELKMMTQLGSHENIVNLLGACTLSGPIY-------LIFEYCCYGDLLNYLRSKREKFS 148
Query: 291 -DDTHWR------------LLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPS 337
D+ + +L F+ L L A VA+ +++L H +L
Sbjct: 149 EDEIEYENQKRLEEEEDLNVLTFEDL----LCFAYQVAKGMEFLEF---KSCVHRDLAAR 201
Query: 338 NVLLDDEMIGHVGDFSMAR-FLPDTDEQTRFIGKLNVRNFVKMALSQRVEEILND 391
NVL+ + + DF +AR + D++ R +L V+ +L + + I +D
Sbjct: 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSD 256
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 196
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 197 EADMWSIGVITYILLSGASP 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAH----LGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLKP N+ L D + DFG+A + F ++ GT +VAPE +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 196
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S G++ + +G P
Sbjct: 197 EADMWSIGVITYILLSGASP 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLKP N+ LD+ + + DFG++ + G+ Y APE G + D
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVD 189
Query: 60 VYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKS 93
V+S G++L M P DD ++P L K+
Sbjct: 190 VWSCGVILYVMLCRRLPF-----DDESIPVLFKN 218
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 197 FSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFN---LIRPGGARSFKSECKAAINIRH 250
+ +G G+FG V Y+ T G +A+K+ N L + + E +RH
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+I++++ + D + ++ L +++ +D + F
Sbjct: 68 PHIIKLYDVIKSKD------EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ------- 114
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPD 360
+ A++Y H + +I H +LKP N+LLD+ + + DF ++ + D
Sbjct: 115 --QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 159
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGI-ARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGD 59
H ++K N+ L + + L DFG A+ P ++ ++GT ++APE D
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 199
Query: 60 VYSFGILLLEMFTGLRP 76
++S GI+ +EM G P
Sbjct: 200 IWSLGIMAIEMIEGEPP 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 68
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 69 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 111
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 112 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 168
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 169 ARH--TDDEMTGYVA 181
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 145 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 202
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 203 IWSVGCIMAELLTG 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 68
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 69 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 111
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 112 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 168
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 169 ARH--TDDEMTGYVA 181
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 145 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 202
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 203 IWSVGCIMAELLTG 216
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 67
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 68 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 110
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 111 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 167
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 168 ARH--TDDEMTGYVA 180
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 201
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 202 IWSVGCIMAELLTG 215
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGDVY 61
DLKP N+ LD + L DFG+ + S GT Y+APE D +
Sbjct: 164 DLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWW 223
Query: 62 SFGILLLEMFTGLRP-----NNGMFKDDLNLPNLVKSALPARAEQILD 104
G +L EM GL P M+ + LN P +K + A +L+
Sbjct: 224 CLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLE 271
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV--GDFSMAR 356
FL + A ++A AL YLH I + +LKP N+LLD + GH+ DF + +
Sbjct: 136 FLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQ--GHIVLTDFGLCK 187
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 HCDLKPSNVFLDD---EMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+ + + DFG++ + + +GT Y+APE + +
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEK 217
Query: 58 GDVYSFGILLLEMFTGLRPNNG 79
DV+S G++L + G P G
Sbjct: 218 CDVWSIGVILFILLAGYPPFGG 239
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGD-----FGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVS 55
H DLKP N+ L LGD FG++R + ++MGT Y+APE ++
Sbjct: 154 HLDLKPQNILLSS--IYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPIT 211
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
+ D+++ GI+ + T P
Sbjct: 212 TATDMWNIGIIAYMLLTHTSP 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 69
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 70 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 112
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 113 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 169
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 170 ARH--TDDEMTGYVA 182
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 146 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 203
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 204 IWSVGCIMAELLTG 217
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT Y+AP + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPAIILSKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 30/169 (17%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINIRH 250
+ F +G G FG+VY I A+KV L + G + E + ++RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKL 308
NI+R++ + + ++ +F P G L + L HG+ D ++
Sbjct: 74 PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDE-----------QRSA 117
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARF 357
++A AL Y H + ++ H ++KP N+L+ G+ G+ +A F
Sbjct: 118 TFMEELADALHYCH---ERKVIHRDIKPENLLM-----GYKGELKIADF 158
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ + + + DFG + P + GT+ Y+ PE G D+
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWSVHAP-SLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 195
Query: 61 YSFGILLLEMFTGLRP 76
+ G+L E G+ P
Sbjct: 196 WCAGVLCYEFLVGMPP 211
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF----------LPVETS------------FIDVM 38
H D+KPSN+ L+ E + DFG++R +P+ + D +
Sbjct: 132 HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYV 191
Query: 39 GTIGYVAPEYGMGSEVSSYG-DVYSFGILLLEMFTG 73
T Y APE +GS + G D++S G +L E+ G
Sbjct: 192 ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 12/82 (14%)
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIG 369
+ + + +KYLH + H ++KPSN+LL+ E V DF ++R F+
Sbjct: 114 VVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSR---------SFVN 161
Query: 370 KLNVRNFVKMALSQRVEEILND 391
V N + +++++ E +D
Sbjct: 162 IRRVTNNIPLSINENTENFDDD 183
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 154 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDL 213
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 214 WSVGCIMGEM 223
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 36/176 (20%)
Query: 207 NFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---T 258
NF SV G D T +K + ++P G+ + C A I RN+ R F T
Sbjct: 14 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 70
Query: 259 AVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+ K V +K F P SLEE+ D + + D + + + +
Sbjct: 71 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQM 126
Query: 311 AIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 127 ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 30/169 (17%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINIRH 250
+ F +G G FG+VY I A+KV L + G + E + ++RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKL 308
NI+R++ + + ++ +F P G L + L HG+ D ++
Sbjct: 75 PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDE-----------QRSA 118
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARF 357
++A AL Y H + ++ H ++KP N+L+ G+ G+ +A F
Sbjct: 119 TFMEELADALHYCH---ERKVIHRDIKPENLLM-----GYKGELKIADF 159
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ + + + DFG + P + GT+ Y+ PE G D+
Sbjct: 138 HRDIKPENLLMGYKGELKIADFGWSVHAP-SLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 196
Query: 61 YSFGILLLEMFTGLRP 76
+ G+L E G+ P
Sbjct: 197 WCAGVLCYEFLVGMPP 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 30/169 (17%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGARSFKSECKAAINIRH 250
+ F +G G FG+VY I A+KV L + G + E + ++RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKL 308
NI+R++ + + ++ +F P G L + L HG+ D ++
Sbjct: 74 PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDE-----------QRSA 117
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARF 357
++A AL Y H + ++ H ++KP N+L+ G+ G+ +A F
Sbjct: 118 TFMEELADALHYCH---ERKVIHRDIKPENLLM-----GYKGELKIADF 158
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ + + + DFG + P + GT+ Y+ PE G D+
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWSVHAP-SLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 195
Query: 61 YSFGILLLEMFTGLRP 76
+ G+L E G+ P
Sbjct: 196 WCAGVLCYEFLVGMPP 211
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N + + M + DFG++R + + G I ++ PE + ++
Sbjct: 197 HRDLATRNCLVGENMVVKIADFGLSRNI-YSADYYKADGNDAIPIRWMPPESIFYNRYTT 255
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+++G++L E+F+ GL+P GM +++
Sbjct: 256 ESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 285
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 83/216 (38%), Gaps = 30/216 (13%)
Query: 169 KLLKTPVYEEKQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNG------TLFDGTTI 222
+L P+Y+ + N L N IG G FG V+ T +
Sbjct: 21 RLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMV 80
Query: 223 AVKVFNLIRPGGARS-FKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNG 281
AVK+ ++ F+ E + NIV++ GV G + +++++M G
Sbjct: 81 AVKMLKEEASADMQADFQREAALMAEFDNPNIVKLL----GVCAVG-KPMCLLFEYMAYG 135
Query: 282 SLEEWL------------HGKDDTHWRLLN---FDFLIKKKLDIAIDVARALKYLHCDCQ 326
L E+L H T R+ + ++L IA VA + YL +
Sbjct: 136 DLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---E 192
Query: 327 PRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
+ H +L N L+ + M+ + DF ++R + D
Sbjct: 193 RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 147 HRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 207 KSIDIWSVGCILAEMLSN-RP 226
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 22/184 (11%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSF----KSECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M + ++LL L
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM------------ETDLYKLLKTQHLSN 123
Query: 306 KKL-DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
+ + R LKY+H + H +LKPSN+LL+ + DF +AR +
Sbjct: 124 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDH 180
Query: 365 TRFI 368
T F+
Sbjct: 181 TGFL 184
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H DLKPSN+ + + T + DFG+AR + T Y APE +G D+
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDL 202
Query: 61 YSFGILLLEM 70
+S G ++ EM
Sbjct: 203 WSVGCIMGEM 212
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 36/176 (20%)
Query: 207 NFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF---T 258
NF SV G D T +K + ++P G+ + C A I RN+ R F T
Sbjct: 3 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 59
Query: 259 AVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
+ K V +K F P SLEE+ D + + D + + + +
Sbjct: 60 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQM 115
Query: 311 AIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 116 ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 1 HCDLKPSNVFL---DDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSS 56
H DLKP NV L +++ + DFG ++ L ETS + + GT Y+APE + +
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAG 195
Query: 57 YG---DVYSFGILLLEMFTGLRP 76
Y D +S G++L +G P
Sbjct: 196 YNRAVDCWSLGVILFICLSGYPP 218
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLL---DDEMIGHVGDFSMARFLPDT 361
A++YLH + I H +LKP NVLL +++ + + DF ++ L +T
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 1 HCDLKPSNVFLDDEM----TAHLGDFGIARFLPVETSFI-DVMGTIGYVAPEYGMGSEVS 55
H DLKPSN+ DE + DFG A+ L E + T +VAPE
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYD 203
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S GILL M G P
Sbjct: 204 EGCDIWSLGILLYTMLAGYTP 224
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N+ L + DFG+AR + +++++ V G + ++APE +
Sbjct: 184 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTF 242
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+S+GI L E+F+ G P GM D
Sbjct: 243 ESDVWSYGIFLWELFSLGSSPYPGMPVDS 271
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 82/226 (36%), Gaps = 50/226 (22%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGARSFKSECKAAINI 248
N S +GAG FG V T + T+AVK +++P + + + + +
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK---MLKPSAHLTEREALMSELKV 95
Query: 249 -----RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFL 303
H NIV + A + G V+ ++ G L +L K D+ F+
Sbjct: 96 LSYLGNHMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDS--------FI 142
Query: 304 IKKK-----------------LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMI 346
K L + VA+ + +L H +L N+LL I
Sbjct: 143 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI 199
Query: 347 GHVGDFSMARFLPDTDEQTRFIGKLNVRNFVKMALSQRVEEILNDF 392
+ DF +AR D + ++ K N R VK + + + F
Sbjct: 200 TKICDFGLAR---DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 242
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 36/186 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 94
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 95 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 137
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 138 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 194
Query: 355 ARFLPD 360
AR D
Sbjct: 195 ARHTDD 200
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 171 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGYVATRWYRAPEIMLNWMHYNQTVD 228
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 229 IWSVGCIMAELLTG 242
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 1 HCDLKPSNVFL---DDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSS 56
H DLKP NV L +++ + DFG ++ L ETS + + GT Y+APE + +
Sbjct: 136 HRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAG 194
Query: 57 YG---DVYSFGILLLEMFTGLRP 76
Y D +S G++L +G P
Sbjct: 195 YNRAVDCWSLGVILFICLSGYPP 217
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLL---DDEMIGHVGDFSMARFLPDT 361
A++YLH + I H +LKP NVLL +++ + + DF ++ L +T
Sbjct: 125 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 31/202 (15%)
Query: 180 QTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSF 238
++++ + L D F L+G G +G VY G + G A+KV ++
Sbjct: 9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-----TGDE 63
Query: 239 KSECKAAINI-----RHRNIVRVFTAV-----SGVDYQGARFKAVVYKFMPNGSLEEWLH 288
+ E K IN+ HRNI + A G+D Q +V +F GS+ + +
Sbjct: 64 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ----LWLVMEFCGAGSVTDLI- 118
Query: 289 GKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGH 348
+T L +++ I ++ R L +LH Q ++ H ++K NVLL +
Sbjct: 119 --KNTKGNTLKEEWIAY----ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVK 169
Query: 349 VGDFSMARFLPDT-DEQTRFIG 369
+ DF ++ L T + FIG
Sbjct: 170 LVDFGVSAQLDRTVGRRNTFIG 191
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 12/85 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA----RFLPVETSFIDVMGTIGYVAPEYGMGSEV-- 54
H D+K NV L + L DFG++ R + +FI GT ++APE E
Sbjct: 152 HRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI---GTPYWMAPEVIACDENPD 208
Query: 55 SSY---GDVYSFGILLLEMFTGLRP 76
++Y D++S GI +EM G P
Sbjct: 209 ATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + ++ + DFG+AR + ID + ++APE
Sbjct: 158 HRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRI 213
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+LL E+FT G P G+ ++L
Sbjct: 214 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 36/155 (23%)
Query: 249 RHRNIVRVFTAVSG-------VDY----------QGARFKAVVYKFMPNGSLEEWLHGKD 291
+H+NI+ + A + V+Y Q R + Y + P+ + EE L KD
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 292 DTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGD 351
+ A VAR ++YL + H +L NVL+ ++ + + D
Sbjct: 137 ---------------LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 178
Query: 352 FSMARFLPDTDEQTRFI-GKLNVRNFVKMALSQRV 385
F +AR + D + G+L V+ AL R+
Sbjct: 179 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 213
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 1 HCDLKPSNVFL---DDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSS 56
H DLKP NV L +++ + DFG ++ L ETS + + GT Y+APE + +
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAG 195
Query: 57 YG---DVYSFGILLLEMFTGLRP 76
Y D +S G++L +G P
Sbjct: 196 YNRAVDCWSLGVILFICLSGYPP 218
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLL---DDEMIGHVGDFSMARFLPDT 361
A++YLH + I H +LKP NVLL +++ + + DF ++ L +T
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 1 HCDLKPSNVFL---DDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSS 56
H DLKP NV L +++ + DFG ++ L ETS + + GT Y+APE + +
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAG 195
Query: 57 YG---DVYSFGILLLEMFTGLRP 76
Y D +S G++L +G P
Sbjct: 196 YNRAVDCWSLGVILFICLSGYPP 218
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLL---DDEMIGHVGDFSMARFLPDT 361
A++YLH + I H +LKP NVLL +++ + + DF ++ L +T
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ L DFG+AR +PV +V+ T+ Y P+ G+++ S
Sbjct: 124 HRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTS 182
Query: 59 -DVYSFGILLLEMFTGLRP 76
D++S G + E+ RP
Sbjct: 183 IDMWSAGCIFAELANAARP 201
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + D+ +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + D+G+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDYGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 36/186 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 171
Query: 355 ARFLPD 360
AR D
Sbjct: 172 ARHTDD 177
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGXVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N+ L + DFG+AR + +++++ V G + ++APE +
Sbjct: 186 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTF 244
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+S+GI L E+F+ G P GM
Sbjct: 245 ESDVWSYGIFLWELFSLGSSPYPGM 269
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 96/265 (36%), Gaps = 65/265 (24%)
Query: 171 LKTPVYEEKQTI------NNLSFKDL----YD-----ATNGFSSANLIGAGNFGSVYNGT 215
L+ P+YE + + NN + D YD N S +GAG FG V T
Sbjct: 2 LQKPMYEVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEAT 61
Query: 216 LFD------GTTIAVKVFNLIRPGGARSFKSECKAAINI-----RHRNIVRVFTAVSGVD 264
+ T+AVK +++P + + + + + H NIV + A +
Sbjct: 62 AYGLIKSDAAMTVAVK---MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT--- 115
Query: 265 YQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKK----------------- 307
G V+ ++ G L +L K D+ F+ K
Sbjct: 116 IGGPTL--VITEYCCYGDLLNFLRRKRDS--------FICSKTSPAIMEDDELALDLEDL 165
Query: 308 LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRF 367
L + VA+ + +L H +L N+LL I + DF +AR D + +
Sbjct: 166 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR---DIKNDSNY 219
Query: 368 IGKLNVRNFVKMALSQRVEEILNDF 392
+ K N R VK + + + F
Sbjct: 220 VVKGNARLPVKWMAPESIFNCVYTF 244
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + ++ + DFG+AR + ID + ++APE
Sbjct: 162 HRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRI 217
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+LL E+FT G P G+ ++L
Sbjct: 218 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 250
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 36/155 (23%)
Query: 249 RHRNIVRVFTAVSG-------VDY----------QGARFKAVVYKFMPNGSLEEWLHGKD 291
+H+NI+ + A + V+Y Q R + Y + P+ + EE L KD
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 292 DTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGD 351
+ A VAR ++YL + H +L NVL+ ++ + + D
Sbjct: 141 ---------------LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 182
Query: 352 FSMARFLPDTDEQTRFI-GKLNVRNFVKMALSQRV 385
F +AR + D + G+L V+ AL R+
Sbjct: 183 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 217
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 1 HCDLKPSNVFLDDEM----TAHLGDFGIARFLPVETSFI-DVMGTIGYVAPEYGMGSEVS 55
H DLKPSN+ DE + DFG A+ L E + T +VAPE
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYD 203
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S GILL M G P
Sbjct: 204 EGCDIWSLGILLYTMLAGYTP 224
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 207 KSIDIWSVGCILAEMLSN-RP 226
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSF----KSECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 131
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 132 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
Query: 366 RFI 368
F+
Sbjct: 182 GFL 184
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + ++ + DFG+AR + ID + ++APE
Sbjct: 166 HRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRI 221
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+LL E+FT G P G+ ++L
Sbjct: 222 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 254
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 36/155 (23%)
Query: 249 RHRNIVRVFTAVSG-------VDY----------QGARFKAVVYKFMPNGSLEEWLHGKD 291
+H+NI+ + A + V+Y Q R + Y + P+ + EE L KD
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 292 DTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGD 351
+ A VAR ++YL + H +L NVL+ ++ + + D
Sbjct: 145 ---------------LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 186
Query: 352 FSMARFLPDTDEQTRFI-GKLNVRNFVKMALSQRV 385
F +AR + D + G+L V+ AL R+
Sbjct: 187 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 221
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + ++ + DFG+AR + ID + ++APE
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXKKTTNGRLPVKWMAPEALFDRI 228
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+LL E+FT G P G+ ++L
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 22/148 (14%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDF------ 302
+H+NI+ + A + G + V+ ++ G+L E+L + L F F
Sbjct: 92 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLQARRPPG---LEFSFNPSHNP 143
Query: 303 ---LIKKKL-DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
L K L A VAR ++YL + H +L NVL+ ++ + + DF +AR +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 359 PDTDEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL R+
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRI 228
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 1 HCDLKPSNVFL---DDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSS 56
H DLKP NV L +++ + DFG ++ L ETS + + GT Y+APE + +
Sbjct: 143 HRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAG 201
Query: 57 YG---DVYSFGILLLEMFTGLRP 76
Y D +S G++L +G P
Sbjct: 202 YNRAVDCWSLGVILFICLSGYPP 224
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLL---DDEMIGHVGDFSMARFLPDT 361
A++YLH + I H +LKP NVLL +++ + + DF ++ L +T
Sbjct: 132 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 176
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 207 KSIDIWSVGCILAEMLSN-RP 226
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSF----KSECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 131
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 132 -------QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
Query: 366 RFI 368
F+
Sbjct: 182 GFL 184
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ ++ + DFG+AR E T F+ + + T Y APE + S+ +
Sbjct: 167 HRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYT 226
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 227 KSIDIWSVGCILAEMLSN-RP 246
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 26/185 (14%)
Query: 191 YDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGARSF----KSECK 243
+D ++ IG G +G V + +D T +A+K I P +++ E +
Sbjct: 39 FDVGPRYTQLQYIGEGAYGMV--SSAYDHVRKTRVAIKK---ISPFEHQTYCQRTLREIQ 93
Query: 244 AAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFL 303
+ RH N++ + + + R +V M L + L + ++ + F +
Sbjct: 94 ILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQQLSNDHICYFLY- 151
Query: 304 IKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDE 363
+ R LKY+H + H +LKPSN+L++ + DF +AR +
Sbjct: 152 ---------QILRGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHD 199
Query: 364 QTRFI 368
T F+
Sbjct: 200 HTGFL 204
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N+ L + DFG+AR + +++++ V G + ++APE +
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTF 249
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGMFKDD 84
DV+S+GI L E+F+ G P GM D
Sbjct: 250 ESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 97/267 (36%), Gaps = 65/267 (24%)
Query: 169 KLLKTPVYEEKQTI------NNLSFKDL----YD-----ATNGFSSANLIGAGNFGSVYN 213
K L+ P+YE + + NN + D YD N S +GAG FG V
Sbjct: 5 KYLQKPMYEVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVE 64
Query: 214 GTLFD------GTTIAVKVFNLIRPGGARSFKSECKAAINI-----RHRNIVRVFTAVSG 262
T + T+AVK +++P + + + + + H NIV + A +
Sbjct: 65 ATAYGLIKSDAAMTVAVK---MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT- 120
Query: 263 VDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKK--------------- 307
G V+ ++ G L +L K D+ F+ K
Sbjct: 121 --IGGPTL--VITEYCCYGDLLNFLRRKRDS--------FICSKTSPAIMEDDELALDLE 168
Query: 308 --LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
L + VA+ + +L H +L N+LL I + DF +AR D +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR---DIKNDS 222
Query: 366 RFIGKLNVRNFVKMALSQRVEEILNDF 392
++ K N R VK + + + F
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTF 249
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N+ L + DFG+AR + +++++ V G + ++APE +
Sbjct: 168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTF 226
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+S+GI L E+F+ G P GM
Sbjct: 227 ESDVWSYGIFLWELFSLGSSPYPGM 251
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 82/226 (36%), Gaps = 50/226 (22%)
Query: 195 NGFSSANLIGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGARSFKSECKAAINI 248
N S +GAG FG V T + T+AVK +++P + + + + +
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK---MLKPSAHLTEREALMSELKV 79
Query: 249 -----RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFL 303
H NIV + A + G V+ ++ G L +L K D+ F+
Sbjct: 80 LSYLGNHMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDS--------FI 126
Query: 304 IKKK-----------------LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMI 346
K L + VA+ + +L H +L N+LL I
Sbjct: 127 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI 183
Query: 347 GHVGDFSMARFLPDTDEQTRFIGKLNVRNFVKMALSQRVEEILNDF 392
+ DF +AR D + ++ K N R VK + + + F
Sbjct: 184 TKICDFGLAR---DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 226
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + ++ + DFG+AR + ID + ++APE
Sbjct: 165 HRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRI 220
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+LL E+FT G P G+ ++L
Sbjct: 221 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 253
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 36/155 (23%)
Query: 249 RHRNIVRVFTAVSG-------VDY----------QGARFKAVVYKFMPNGSLEEWLHGKD 291
+H+NI+ + A + V+Y Q R + Y + P+ + EE L KD
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 292 DTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGD 351
+ A VAR ++YL + H +L NVL+ ++ + + D
Sbjct: 144 ---------------LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 185
Query: 352 FSMARFLPDTDEQTRFI-GKLNVRNFVKMALSQRV 385
F +AR + D + G+L V+ AL R+
Sbjct: 186 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 220
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 211 KSIDIWSVGCILAEMLSN-RP 230
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSF----KSECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 135
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 136 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
Query: 366 RFI 368
F+
Sbjct: 186 GFL 188
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 42/197 (21%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-----GGARSFK 239
K +++ + + + +G+G +GSV FD G +AVK L RP R+++
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 70
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
E + +++H N++ + F P SLEE+ TH +
Sbjct: 71 -ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGAD 112
Query: 300 FDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
+ ++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 353 SMARFLPDTDEQTRFIG 369
+AR DE T ++
Sbjct: 170 GLARH--TDDEMTGYVA 184
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 42/197 (21%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-----GGARSFK 239
K +++ + + + +G+G +GSV FD G +AVK L RP R+++
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 90
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
E + +++H N++ + F P SLEE+ TH +
Sbjct: 91 -ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGAD 132
Query: 300 FDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
+ ++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF
Sbjct: 133 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 189
Query: 353 SMARFLPDTDEQTRFIG 369
+AR DE T ++
Sbjct: 190 GLARH--TDDEMTGYVA 204
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 225
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 226 IWSVGCIMAELLTG 239
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 211 KSIDIWSVGCILAEMLSN-RP 230
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 22/184 (11%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYXQRTLREIKIL 79
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M + ++LL L
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM------------ETDLYKLLKTQHLSN 127
Query: 306 KKL-DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
+ + R LKY+H + H +LKPSN+LL+ + DF +AR +
Sbjct: 128 DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 365 TRFI 368
T F+
Sbjct: 185 TGFL 188
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 1 HCDLKPSNVFL---DDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSS 56
H DLKP NV L +++ + DFG ++ L ETS + + GT Y+APE + +
Sbjct: 276 HRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAG 334
Query: 57 YG---DVYSFGILLLEMFTGLRP 76
Y D +S G++L +G P
Sbjct: 335 YNRAVDCWSLGVILFICLSGYPP 357
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLL---DDEMIGHVGDFSMARFLPDT 361
A++YLH + I H +LKP NVLL +++ + + DF ++ L +T
Sbjct: 265 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 309
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + ++ + DFG+AR + ID + ++APE
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+LL E+FT G P G+ ++L
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 36/155 (23%)
Query: 249 RHRNIVRVFTAVSG-------VDY----------QGARFKAVVYKFMPNGSLEEWLHGKD 291
+H+NI+ + A + V+Y Q R + Y + P+ + EE L KD
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 292 DTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGD 351
+ A VAR ++YL + H +L NVL+ ++ + + D
Sbjct: 152 ---------------LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 352 FSMARFLPDTDEQTRFI-GKLNVRNFVKMALSQRV 385
F +AR + D + G+L V+ AL R+
Sbjct: 194 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + ++ + DFG+AR + ID + ++APE
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+LL E+FT G P G+ ++L
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 22/148 (14%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDF------ 302
+H+NI+ + A + G + V+ ++ G+L E+L ++ L + +
Sbjct: 92 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLQAREPPG---LEYSYNPSHNP 143
Query: 303 ---LIKKKL-DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
L K L A VAR ++YL + H +L NVL+ ++ + + DF +AR +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 359 PDTDEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL R+
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRI 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G D T +AVK N R F +E ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS + VV + M +G L+ +L + + +++ + +A ++
Sbjct: 85 LLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + H NL N ++ + +GDF M R + +TD
Sbjct: 140 ADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H +L N + + T +GDFG+ R + ET + G + ++APE ++
Sbjct: 153 HRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 57 YGDVYSFGILLLEM 70
D++SFG++L E+
Sbjct: 212 SSDMWSFGVVLWEI 225
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 1 HCDLKPSNVFL---DDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSS 56
H DLKP NV L +++ + DFG ++ L ETS + + GT Y+APE + +
Sbjct: 262 HRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAG 320
Query: 57 YG---DVYSFGILLLEMFTGLRP 76
Y D +S G++L +G P
Sbjct: 321 YNRAVDCWSLGVILFICLSGYPP 343
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 317 ALKYLHCDCQPRIAHCNLKPSNVLL---DDEMIGHVGDFSMARFLPDT 361
A++YLH + I H +LKP NVLL +++ + + DF ++ L +T
Sbjct: 251 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI--DVMGTIGYVAPEYGMGSEVSSYG 58
H DLKPSN+ + + T + DFG+AR TSF+ + T Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILGMGYKENV 206
Query: 59 DVYSFGILLLEM 70
D++S G ++ EM
Sbjct: 207 DIWSVGCIMGEM 218
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 41/193 (21%)
Query: 206 GNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF--- 257
NF SV G D T +K + ++P G+ + C A I RN+ R F
Sbjct: 8 NNFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ 64
Query: 258 TAVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD 309
T + K V +K F P SLEE+ D + + D + + +
Sbjct: 65 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQ 120
Query: 310 IAIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR--- 356
+ +D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 357 --FLPDTDEQTRF 367
F+ + + TR+
Sbjct: 178 TSFMMEPEVVTRY 190
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGI 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L +P R+++ E
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSKPFQSIIHAKRTYR-E 83
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 84 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 126
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 127 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 183
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 184 ARH--TDDEMTGYVA 196
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 217
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 218 IWSVGCIMAELLTG 231
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGI 214
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 21/159 (13%)
Query: 203 IGAGNFGSVYNGTLFDGT-TIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVS 261
+G G FG VY G + T+AVK F E I+H N+V++
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLL---- 73
Query: 262 GVDYQGARFKAVVYKFMPNGSLEEWLH--GKDDTHWRLLNFDFLIKKKLDIAIDVARALK 319
GV + F ++ +FM G+L ++L + + +L L +A ++ A++
Sbjct: 74 GVCTREPPF-YIITEFMTYGNLLDYLRECNRQEVSAVVL---------LYMATQISSAME 123
Query: 320 YLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
YL + H +L N L+ + + V DF ++R +
Sbjct: 124 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 159
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 42/197 (21%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-----GGARSFK 239
K +++ + + + +G+G +GSV FD G +AVK L RP R+++
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 76
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
E + +++H N++ + F P SLEE+ TH +
Sbjct: 77 -ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGAD 118
Query: 300 FDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
+ ++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 175
Query: 353 SMARFLPDTDEQTRFIG 369
+AR DE T ++
Sbjct: 176 GLARHT--DDEMTGYVA 190
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 212 IWSVGCIMAELLTG 225
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 42/197 (21%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-----GGARSFK 239
K +++ + + + +G+G +GSV FD G +AVK L RP R+++
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 89
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
E + +++H N++ + F P SLEE+ TH +
Sbjct: 90 -ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGAD 131
Query: 300 FDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
+ ++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF
Sbjct: 132 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 188
Query: 353 SMARFLPDTDEQTRFIG 369
+AR DE T ++
Sbjct: 189 GLARH--TDDEMTGYVA 203
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 224
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 225 IWSVGCIMAELLTG 238
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 207 KSIDIWSVGCILAEMLSN-RP 226
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 131
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 132 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181
Query: 366 RFI 368
F+
Sbjct: 182 GFL 184
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G D T +AVK N R F +E ++VR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS + VV + M +G L+ +L + + +++ + +A ++
Sbjct: 86 LLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + H NL N ++ + +GDF M R + +TD
Sbjct: 141 ADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 185
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H +L N + + T +GDFG+ R + ET + G + ++APE ++
Sbjct: 154 HRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTT 212
Query: 57 YGDVYSFGILLLEM 70
D++SFG++L E+
Sbjct: 213 SSDMWSFGVVLWEI 226
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 211 KSIDIWSVGCILAEMLSN-RP 230
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 22/184 (11%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M + ++LL L
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM------------ETDLYKLLKCQHLSN 127
Query: 306 KKLDIAI-DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
+ + + R LKY+H + H +LKPSN+LL+ + DF +AR +
Sbjct: 128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 365 TRFI 368
T F+
Sbjct: 185 TGFL 188
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N + ++ T +GDFG+ R + ET G + +++PE ++
Sbjct: 146 HRDLAARNCMVAEDFTVKIGDFGMTRDI-XETDXXRKGGKGLLPVRWMSPESLKDGVFTT 204
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
Y DV+SFG++L E+ T +P G+
Sbjct: 205 YSDVWSFGVVLWEIATLAEQPYQGL 229
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G T +A+K N R F +E ++VR
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS QG + V+ + M G L+ +L + + + + K + +A ++
Sbjct: 78 LLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 132
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + + H +L N ++ ++ +GDF M R + +TD
Sbjct: 133 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + ++ + DFG+AR + ID + ++APE
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+LL E+FT G P G+ ++L
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 36/155 (23%)
Query: 249 RHRNIVRVFTAVSG-------VDY----------QGARFKAVVYKFMPNGSLEEWLHGKD 291
+H+NI+ + A + V+Y Q R + Y + P+ + EE L KD
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 292 DTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGD 351
+ A VAR ++YL + H +L NVL+ ++ + + D
Sbjct: 152 ---------------LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 352 FSMARFLPDTDEQTRFI-GKLNVRNFVKMALSQRV 385
F +AR + D + G+L V+ AL R+
Sbjct: 194 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N + + + DFG++R + +T F G I + APE ++ S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-FTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGI 214
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 205 KSIDIWSVGCILAEMLSN-RP 224
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 129
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 130 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
Query: 366 RFI 368
F+
Sbjct: 180 GFL 182
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 42/197 (21%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-----GGARSFK 239
K +++ + + + +G+G +GSV FD G +AVK L RP R+++
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 70
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
E + +++H N++ + F P SLEE+ TH +
Sbjct: 71 -ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGAD 112
Query: 300 FDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
+ ++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 353 SMARFLPDTDEQTRFIG 369
+AR DE T ++
Sbjct: 170 YLARH--TDDEMTGYVA 184
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DF +AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFYLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGI 214
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGI 221
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 211 KSIDIWSVGCILAEMLSN-RP 230
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNLNKVRVAIRKISPFEHQTYCQRTLREIKIL 79
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 135
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 136 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 366 RFI 368
F+
Sbjct: 186 GFL 188
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 211
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 212 KSIDIWSVGCILAEMLSN-RP 231
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 136
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 137 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
Query: 366 RFI 368
F+
Sbjct: 187 GFL 189
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 153 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 212
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 213 KSIDIWSVGCILAEMLSN-RP 232
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 24 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 81
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 82 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 137
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 138 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 187
Query: 366 RFI 368
F+
Sbjct: 188 GFL 190
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 144 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 203
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 204 KSIDIWSVGCILAEMLSN-RP 223
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 15 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 72
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 73 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 128
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 129 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 178
Query: 366 RFI 368
F+
Sbjct: 179 GFL 181
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 211 KSIDIWSVGCILAEMLSN-RP 230
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 135
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 136 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 366 RFI 368
F+
Sbjct: 186 GFL 188
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 205 KSIDIWSVGCILAEMLSN-RP 224
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 129
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 130 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
Query: 366 RFI 368
F+
Sbjct: 180 GFL 182
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 210
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 211 KSIDIWSVGCILAEMLSN-RP 230
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 135
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 136 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 366 RFI 368
F+
Sbjct: 186 GFL 188
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 209 KSIDIWSVGCILAEMLSN-RP 228
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 78 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 133
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 134 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
Query: 366 RFI 368
F+
Sbjct: 184 GFL 186
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 211
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 212 KSIDIWSVGCILAEMLSN-RP 231
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 136
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 137 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
Query: 366 RFI 368
F+
Sbjct: 187 GFL 189
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 167 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 227 KSIDIWSVGCILAEMLSN-RP 246
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 22/184 (11%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSF----KSECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + +A + M + L L G D ++LL L
Sbjct: 96 LRFRHENIIGINDII----------RAPTIEQMKDVYLVTHLMGAD--LYKLLKTQHLSN 143
Query: 306 KKL-DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
+ + R LKY+H + H +LKPSN+LL+ + DF +AR +
Sbjct: 144 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
Query: 365 TRFI 368
T F+
Sbjct: 201 TGFL 204
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 209 KSIDIWSVGCILAEMLSN-RP 228
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 133
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 134 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
Query: 366 RFI 368
F+
Sbjct: 184 GFL 186
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL N + ++ T +GDFG+ R + ET G + +++PE ++
Sbjct: 155 HRDLAARNCMVAEDFTVKIGDFGMTRDI-XETDXXRKGGKGLLPVRWMSPESLKDGVFTT 213
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
Y DV+SFG++L E+ T +P G+
Sbjct: 214 YSDVWSFGVVLWEIATLAEQPYQGL 238
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G T +A+K N R F +E ++VR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS QG + V+ + M G L+ +L + + + + K + +A ++
Sbjct: 87 LLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + + H +L N ++ ++ +GDF M R + +TD
Sbjct: 142 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 186
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 214
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 215 KSIDIWSVGCILAEMLSN-RP 234
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 26 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 83
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 84 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 139
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 140 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 189
Query: 366 RFI 368
F+
Sbjct: 190 GFL 192
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 207 KSIDIWSVGCILAEMLSN-RP 226
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 131
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 132 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181
Query: 366 RFI 368
F+
Sbjct: 182 GFL 184
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF +
Sbjct: 115 NIVKSQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGL 171
Query: 355 ARFLPDTDEQTRFIG 369
R DE T ++
Sbjct: 172 CRH--TDDEMTGYVA 184
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+ R + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDSELKILDFGLCRH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H DLK N+ LD + + DFG + G Y APE G + D
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVD 195
Query: 60 VYSFGILLLEMFTGLRPNNGM 80
V+S G++L + +G P +G
Sbjct: 196 VWSLGVILYTLVSGSLPFDGQ 216
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 24/158 (15%)
Query: 203 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGARSFKSECKAAINIRHRNIVRVFTA 259
IG GNF V + G +AVK+ + + + E + + H NIV++F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWL--HGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
+ + + +V ++ G + ++L HG+ F + A
Sbjct: 82 I-----ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-----------QIVSA 125
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA 355
++Y H Q I H +LK N+LLD + + DF +
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-- 58
H D+K N+ L + LGDFG A + F+ GT ++APE + + Y
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV---GTPYWMAPEVILAMDEGQYDGK 194
Query: 59 -DVYSFGILLLEM 70
DV+S GI +E+
Sbjct: 195 VDVWSLGITCIEL 207
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 42/197 (21%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-----GGARSFK 239
K +++ + + + +G+G +GSV FD G +AVK L RP R+++
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 66
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
E + +++H N++ + F P SLEE+ TH +
Sbjct: 67 -ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGAD 108
Query: 300 FDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
+ ++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF
Sbjct: 109 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 165
Query: 353 SMARFLPDTDEQTRFIG 369
+AR DE T ++
Sbjct: 166 GLARH--TDDEMTGYVA 180
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 201
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 202 IWSVGCIMAELLTG 215
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR-FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLK NV LD E L DFG+ + + + GT Y+APE D +
Sbjct: 149 DLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWW 208
Query: 62 SFGILLLEMFTGLRPNNGMFKDDL 85
+ G+LL EM G P +DDL
Sbjct: 209 AMGVLLYEMLCGHAPFEAENEDDL 232
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGI 216
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
+ DLKP N+ +D + + DFG A+ + T + GT +APE + + D
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEALAPEIILSKGYNKAVDW 221
Query: 61 YSFGILLLEMFTGLRP 76
++ G+L+ EM G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 149 HRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 209 KSIDIWSVGCILAEMLSN-RP 228
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 22/184 (11%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M + ++LL L
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLM------------ETDLYKLLKTQHLSN 125
Query: 306 KKL-DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
+ + R LKY+H + H +LKPSN+LL+ + DF +AR +
Sbjct: 126 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH 182
Query: 365 TRFI 368
T F+
Sbjct: 183 TGFL 186
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 HCDLKPSNVFLDD---EMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+ + + DFG++ V + +GT Y+APE + +
Sbjct: 144 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEK 202
Query: 58 GDVYSFGILLLEMFTGLRPNNG 79
DV+S G++L + G P G
Sbjct: 203 CDVWSCGVILYILLCGYPPFGG 224
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 HCDLKPSNVFLDD---EMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ L+ + + DFG++ V + +GT Y+APE + +
Sbjct: 127 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEK 185
Query: 58 GDVYSFGILLLEMFTGLRPNNG 79
DV+S G++L + G P G
Sbjct: 186 CDVWSCGVILYILLCGYPPFGG 207
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE---TSFI-DVMGTIGYVAPEYGMGSE-VS 55
H DLKPSN+ L+ + DFG+AR + T F+ + + T Y APE + S+ +
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D++S G +L EM + RP
Sbjct: 227 KSIDIWSVGCILAEMLSN-RP 246
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 190 LYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS----ECKAA 245
++D +++ + IG G +G V + +D I P +++ E K
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 246 INIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIK 305
+ RH NI+ + + + + +V M L + L + ++ + F +
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLY--- 151
Query: 306 KKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
+ R LKY+H + H +LKPSN+LL+ + DF +AR + T
Sbjct: 152 -------QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 201
Query: 366 RFI 368
F+
Sbjct: 202 GFL 204
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGI 221
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 40/188 (21%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-----GGARSFK 239
K +++ + + + +G+G +GSV FD G +AVK L RP R+++
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 70
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
E + +++H N++ + F P SLEE+ TH +
Sbjct: 71 -ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGAD 112
Query: 300 FDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
+ ++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 353 SMARFLPD 360
+AR D
Sbjct: 170 GLARHTDD 177
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR E + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMA--GFVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGI 218
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGI 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 40/188 (21%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-----GGARSFK 239
K +++ + + + +G+G +GSV FD G +AVK L RP R+++
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 70
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
E + +++H N++ + F P SLEE+ TH +
Sbjct: 71 -ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGAD 112
Query: 300 FDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
+ ++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 353 SMARFLPD 360
+AR D
Sbjct: 170 GLARHTDD 177
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGI 221
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGI 216
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGI 221
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 207 DVWAFGVLLWEIATYGMSPYPGI 229
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-- 58
H D+K N+ L + LGDFG A + F+ GT ++APE + + Y
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV---GTPYWMAPEVILAMDEGQYDGK 233
Query: 59 -DVYSFGILLLEM 70
DV+S GI +E+
Sbjct: 234 VDVWSLGITCIEL 246
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGI 221
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE ++ S
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGI 220
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H DL NV L + A + DFG+++ L + S+ + + APE + SS
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+S+G+ + E + G +P M
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPYKKM 217
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 29/184 (15%)
Query: 203 IGAGNFGSVYNGTLF---DGTTIAVKVFNLIRPGGARSFKSECKAAINIRHR----NIVR 255
+G GNFGSV G +A+KV ++ G ++ E I H+ IVR
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKV---LKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
+ A +V + G L ++L GK + + + ++ V+
Sbjct: 75 LIGVCQ------AEALMLVMEMAGGGPLHKFLVGKRE--------EIPVSNVAELLHQVS 120
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL--PDTDEQTRFIGKLNV 373
+KYL + H +L NVLL + + DF +++ L D+ R GK +
Sbjct: 121 MGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 177
Query: 374 RNFV 377
+ +
Sbjct: 178 KWYA 181
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-----GGARSFK 239
K +++ + + +G+G +GSV FD G +AVK L RP R+++
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 80
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
E + +++H N++ + F P SLEE+ TH +
Sbjct: 81 -ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGAD 122
Query: 300 FDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
+ ++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF
Sbjct: 123 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 179
Query: 353 SMARFLPDTDEQTRFIG 369
+AR DE T ++
Sbjct: 180 GLARH--TDDEMTGYVA 194
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 158 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 215
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 216 IWSVGCIMAELLTG 229
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVM------GTIGYVAPEYGMGSE 53
H D+K NV L D A L DFG A L + D++ GT ++APE +G
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 54 VSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNL-----PNLVKSALPARAEQILDVAFF 108
+ DV+S ++L M G P F+ L L P V+ P+ A L
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAP--LTAQAI 306
Query: 109 QEIEEEETLYKKASS 123
QE +E +++ +++
Sbjct: 307 QEGLRKEPIHRVSAA 321
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + ++ + DFG+AR + ID + ++APE
Sbjct: 214 HRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRI 269
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+LL E+FT G P G+ ++L
Sbjct: 270 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 36/155 (23%)
Query: 249 RHRNIVRVFTAVSG-------VDY----------QGARFKAVVYKFMPNGSLEEWLHGKD 291
+H+NI+ + A + V+Y Q R + Y + P+ + EE L KD
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 292 DTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGD 351
+ A VAR ++YL + H +L NVL+ ++ + + D
Sbjct: 193 ---------------LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIAD 234
Query: 352 FSMARFLPDTDEQTRFI-GKLNVRNFVKMALSQRV 385
F +AR + D + G+L V+ AL R+
Sbjct: 235 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 269
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI--DVMGTIGYVAPEYGMGSEVSSYG 58
H DLKPSN+ + + T + DFG+AR TSF+ + T Y APE +G
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILGMGYKENV 206
Query: 59 DVYSFGILLLEM 70
D++S G ++ EM
Sbjct: 207 DLWSVGCIMGEM 218
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 41/193 (21%)
Query: 206 GNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIV-----RVF--- 257
NF SV G D T +K + ++P G+ + C A I RN+ R F
Sbjct: 8 NNFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ 64
Query: 258 TAVSGVDYQGARFKAVVYK--------FMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLD 309
T + K V +K F P SLEE+ D + + D + + +
Sbjct: 65 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF----QDVYIVMELMDANLCQVIQ 120
Query: 310 IAIDVAR----------ALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR--- 356
+ +D R +K+LH I H +LKPSN+++ + + DF +AR
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 357 --FLPDTDEQTRF 367
F+ + + TR+
Sbjct: 178 TSFMMEPEVVTRY 190
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 40/188 (21%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-----GGARSFK 239
K +++ + + + +G+G +GSV FD G +AVK L RP R+++
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 90
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
E + +++H N++ + F P SLEE+ TH +
Sbjct: 91 -ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGAD 132
Query: 300 FDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
+ ++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF
Sbjct: 133 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 189
Query: 353 SMARFLPD 360
+AR D
Sbjct: 190 GLARHTDD 197
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGXVATRWYRAPEIMLNWMHYNQTVD 225
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 226 IWSVGCIMAELLTG 239
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 1 HCDLKPSNVFL--DDEMTAHLGDFGIAR-FLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H DLKP N+ D + DFG+AR + P E ++ GT ++APE VS
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN-FGTPEFLAPEVVNYDFVSFP 268
Query: 58 GDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVAFFQEIEEE 114
D++S G++ + +GL P G D L N++ E+ FQ+I EE
Sbjct: 269 TDMWSVGVIAYMLLSGLSPFLGD-NDAETLNNILACRWDLEDEE------FQDISEE 318
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 24/171 (14%)
Query: 193 ATNGF---SSANLIGAGNFGSVYN-GTLFDGTTIAVKVFNLIRPGGARSFKSECKAAINI 248
A N F S ++G G FG V+ G +A K+ K+E +
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKL 308
H N+++++ A ++ +V +++ G L + + D + L D ++ K
Sbjct: 144 DHANLIQLYDA-----FESKNDIVLVMEYVDGGELFDRII---DESYNLTELDTILFMK- 194
Query: 309 DIAIDVARALKYLHCDCQPRIAHCNLKPSNVLL---DDEMIGHVGDFSMAR 356
+ ++++H Q I H +LKP N+L D + I + DF +AR
Sbjct: 195 ----QICEGIRHMH---QMYILHLDLKPENILCVNRDAKQI-KIIDFGLAR 237
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N + + + DFG++R + +T + G I + APE ++ S
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAPAGAKFPIKWTAPESLAYNKFSIK 193
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 194 SDVWAFGVLLWEIATYGMSPYPGI 217
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + + + DFG+AR + + ID + ++APE
Sbjct: 226 HRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRV 281
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 282 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ ++ G+L E+L + R+
Sbjct: 145 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL RV
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRV 281
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N + + + DFG++R + +T + G I + APE ++ S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAPAGAKFPIKWTAPESLAYNKFSIK 194
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-----GGARSFK 239
K +++ + + + +G+G +GSV FD G +AVK L RP R+++
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 66
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
E + +++H N++ + F P SLEE+ TH +
Sbjct: 67 -ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGAD 108
Query: 300 FDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
+ ++K +KL + + R LKY+H I H +LKPSN+ ++++ + DF
Sbjct: 109 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 165
Query: 353 SMARFLPDTDEQTRFIG 369
+AR DE F+
Sbjct: 166 GLARH--TDDEMAGFVA 180
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTVD 201
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 202 IWSVGCIMAELLTG 215
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G D T +AVK N R F +E ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS + VV + M +G L+ +L + + +++ + +A ++
Sbjct: 85 LLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + H +L N ++ + +GDF M R + +TD
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + + T +GDFG+ R + ET G + ++APE ++
Sbjct: 153 HRDLAARNCMVAHDFTVKIGDFGMTRDI-XETDXXRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 57 YGDVYSFGILLLEM 70
D++SFG++L E+
Sbjct: 212 SSDMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G D T +AVK N R F +E ++VR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS + VV + M +G L+ +L + + +++ + +A ++
Sbjct: 82 LLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + H +L N ++ + +GDF M R + +TD
Sbjct: 137 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 181
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + + T +GDFG+ R + ET G + ++APE ++
Sbjct: 150 HRDLAARNCMVAHDFTVKIGDFGMTRDI-XETDXXRKGGKGLLPVRWMAPESLKDGVFTT 208
Query: 57 YGDVYSFGILLLEM 70
D++SFG++L E+
Sbjct: 209 SSDMWSFGVVLWEI 222
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHL--GDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEV-SSY 57
H DLK N LD L DFG ++ + + +GT Y+APE + E
Sbjct: 138 HRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKV 197
Query: 58 GDVYSFGILLLEMFTGLRP 76
DV+S G+ L M G P
Sbjct: 198 ADVWSCGVTLYVMLVGAYP 216
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEM---TAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H +LKP N+ L + L DFG+A + ++ GT GY++PE S
Sbjct: 127 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 186
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G++L + G P
Sbjct: 187 VDIWACGVILYILLVGYPP 205
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 26/158 (16%)
Query: 219 GTTIAVKVFNLIRPGGARSFKS---ECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVY 275
G A K+ N + AR F+ E + ++H NIVR+ ++ Q F +V+
Sbjct: 30 GLEFAAKIIN-TKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESFHYLVF 83
Query: 276 KFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID-VARALKYLHCDCQPRIAHCNL 334
+ G L E ++ +F + I + ++ Y H + I H NL
Sbjct: 84 DLVTGGELFE----------DIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNL 130
Query: 335 KPSNVLLDDEMIG---HVGDFSMARFLPDTDEQTRFIG 369
KP N+LL + G + DF +A + D++ F G
Sbjct: 131 KPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 168
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRP-----GGARSFK 239
K +++ + + + +G+G +GSV FD G +AVK L RP R+++
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 66
Query: 240 SECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
E + +++H N++ + F P SLEE+ TH +
Sbjct: 67 -ELRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGAD 108
Query: 300 FDFLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
+ ++K KL + + R LKY+H I H +LKPSN+ ++++ + DF
Sbjct: 109 LNNIVKCAKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 165
Query: 353 SMARFLPDTDEQTRFIG 369
+AR DE T ++
Sbjct: 166 GLARH--TDDEMTGYVA 180
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + DFG+AR + + T Y APE + + D
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 201
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 202 IWSVGCIMAELLTG 215
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + + + DFG+AR + + ID + ++APE
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKKTTNGRLPVKWMAPEALFDRV 235
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ ++ G+L E+L + R+
Sbjct: 99 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL RV
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRV 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G D T +AVK N R F +E ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS + VV + M +G L+ +L + + +++ + +A ++
Sbjct: 85 LLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + H +L N ++ + +GDF M R + +TD
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + + T +GDFG+ R + ET G + ++APE ++
Sbjct: 153 HRDLAARNCMVAHDFTVKIGDFGMTRDI-XETDXXRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 57 YGDVYSFGILLLEM 70
D++SFG++L E+
Sbjct: 212 SSDMWSFGVVLWEI 225
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEM---TAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H +LKP N+ L + L DFG+A + ++ GT GY++PE S
Sbjct: 151 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 210
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G++L + G P
Sbjct: 211 VDIWACGVILYILLVGYPP 229
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 219 GTTIAVKVFNLIRPGGARSFKS---ECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVY 275
G A K+ N + AR F+ E + ++H NIVR+ ++ Q F +V+
Sbjct: 54 GLEFAAKIIN-TKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESFHYLVF 107
Query: 276 KFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLK 335
+ G L E + ++ + + I++ L+ ++ Y H + I H NLK
Sbjct: 108 DLVTGGELFEDIVARE--FYSEADASHCIQQILE-------SIAYCHSNG---IVHRNLK 155
Query: 336 PSNVLLDDEMIG---HVGDFSMARFLPDTDEQTRFIG 369
P N+LL + G + DF +A + D++ F G
Sbjct: 156 PENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 192
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + + + DFG+AR + + ID + ++APE
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKKTTNGRLPVKWMAPEALFDRV 235
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ ++ G+L E+L + R+
Sbjct: 99 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL RV
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRV 235
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + F +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + FG+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILGFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + + + DFG+AR + + ID + ++APE
Sbjct: 167 HRDLTARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRV 222
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 223 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 255
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ ++ G+L E+L + R+
Sbjct: 86 KHKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 141 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL RV
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRV 222
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEM---TAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H +LKP N+ L + L DFG+A + ++ GT GY++PE S
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 187
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G++L + G P
Sbjct: 188 VDIWACGVILYILLVGYPP 206
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 26/158 (16%)
Query: 219 GTTIAVKVFNLIRPGGARSFKS---ECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVY 275
G A K+ N + AR F+ E + ++H NIVR+ ++ Q F +V+
Sbjct: 31 GLEFAAKIIN-TKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESFHYLVF 84
Query: 276 KFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID-VARALKYLHCDCQPRIAHCNL 334
+ G L E ++ +F + I + ++ Y H + I H NL
Sbjct: 85 DLVTGGELFE----------DIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNL 131
Query: 335 KPSNVLLDDEMIG---HVGDFSMARFLPDTDEQTRFIG 369
KP N+LL + G + DF +A + D++ F G
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 169
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + + DFG+AR + + + + ++APE +
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ ++ G+L E+L + R+
Sbjct: 99 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D G+L V+ AL RV
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRV 235
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-D 59
H D+K N+ + ++ T L DFG A +L F GTI Y APE MG+ +
Sbjct: 153 HRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELE 212
Query: 60 VYSFGILL 67
++S G+ L
Sbjct: 213 MWSLGVTL 220
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + + + DFG+AR + + ID + ++APE
Sbjct: 180 HRDLAARNVLVTENNVMRIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ ++ G+L E+L + R+
Sbjct: 99 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL RV
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRV 235
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H D+KP N+ + + + + DFG+A L + T + APE V Y
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYT 231
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
D+++ G+L + +GL P G +DDL VK
Sbjct: 232 DMWAIGVLGYVLLSGLSPFAG--EDDLETLQNVK 263
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEM---TAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H +LKP N+ L + L DFG+A + ++ GT GY++PE S
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP 187
Query: 58 GDVYSFGILLLEMFTGLRP 76
D+++ G++L + G P
Sbjct: 188 VDIWACGVILYILLVGYPP 206
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 26/158 (16%)
Query: 219 GTTIAVKVFNLIRPGGARSFKS---ECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVY 275
G A K+ N + AR F+ E + ++H NIVR+ ++ Q F +V+
Sbjct: 31 GLEFAAKIIN-TKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESFHYLVF 84
Query: 276 KFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID-VARALKYLHCDCQPRIAHCNL 334
+ G L E ++ +F + I + ++ Y H + I H NL
Sbjct: 85 DLVTGGELFE----------DIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNL 131
Query: 335 KPSNVLLDDEMIG---HVGDFSMARFLPDTDEQTRFIG 369
KP N+LL + G + DF +A + D++ F G
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 169
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + + + DFG+AR + + ID + ++APE
Sbjct: 169 HRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRV 224
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 225 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 257
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ ++ G+L E+L + R+
Sbjct: 88 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 143 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL RV
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRV 224
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+AR L ++ + G I ++A E + +
Sbjct: 142 HRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQ 201
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+S+G+ + E+ T G +P +G+
Sbjct: 202 SDVWSYGVTVWELMTFGAKPYDGI 225
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 24/169 (14%)
Query: 201 NLIGAGNFGSVYNGTLF-DGTTIAVKV-FNLIR----PGGARSFKSECKAAINIRHRNIV 254
++G+G FG+VY G DG + + V ++R P + E + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 255 RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDV 314
R+ Q +V + MP G L L + RL + D L + + +
Sbjct: 83 RLLGICLTSTVQ------LVTQLMPYGCL---LDHVRENRGRLGSQDLL-----NWCMQI 128
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDE 363
A+ + YL R+ H +L NVL+ + DF +AR L D DE
Sbjct: 129 AKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLL-DIDE 173
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + + + DFG+AR + + ID + ++APE
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ + G+L E+L + R+
Sbjct: 99 KHKNIINLLGACT---QDGPLY--VIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL RV
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRV 235
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + + + DFG+AR + + ID + ++APE
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ ++ G+L E+L + R+
Sbjct: 99 KHKNIITLLGACT---QDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL RV
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRV 235
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G D T +AVK N R F +E ++VR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS + VV + M +G L+ +L + + +++ + +A ++
Sbjct: 84 LLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + H +L N ++ + +GDF M R + +TD
Sbjct: 139 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 183
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + + T +GDFG+ R + ET + G + ++APE ++
Sbjct: 152 HRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTT 210
Query: 57 YGDVYSFGILLLEM 70
D++SFG++L E+
Sbjct: 211 SSDMWSFGVVLWEI 224
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DL N + + + DFG++R + T+ I + APE + S
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 213 DVWAFGVLLWEIATYGMSPYPGI 235
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + + + DFG+AR + + ID + ++APE
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ ++ G+L E+L + R+
Sbjct: 99 KHKNIIHLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL RV
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRV 235
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + + + DFG+AR + + ID + ++APE
Sbjct: 172 HRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRV 227
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 228 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 260
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ ++ G+L E+L + R+
Sbjct: 91 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 146 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL RV
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRV 227
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + + + DFG+AR + + ID + ++APE
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ ++ G+L E+L + R+
Sbjct: 99 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL RV
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRV 235
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + D +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + D G+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDAGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H D++P N+ ++ + +FG AR L +F + Y APE VS+
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTAT 184
Query: 59 DVYSFGILLLEMFTGLRP 76
D++S G L+ + +G+ P
Sbjct: 185 DMWSLGTLVYVLLSGINP 202
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL----PVETSFIDVMGTIGYVAPE--YGMGSEV 54
H D+KP NV LD L DFG + V++S +GT Y++PE M +
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV--AVGTPDYISPEILQAMEDGM 255
Query: 55 SSYG---DVYSFGILLLEMFTGLRP 76
YG D +S G+ + EM G P
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL----PVETSFIDVMGTIGYVAPE--YGMGSEV 54
H D+KP NV LD L DFG + V++S +GT Y++PE M +
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV--AVGTPDYISPEILQAMEDGM 271
Query: 55 SSYG---DVYSFGILLLEMFTGLRP 76
YG D +S G+ + EM G P
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG-------TIGYVAPEYGMGSE 53
H DL NV + + + DFG+AR + + ID + ++APE
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 54 VSSYGDVYSFGILLLEMFT-GLRPNNGMFKDDL 85
+ DV+SFG+L+ E+FT G P G+ ++L
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 16/145 (11%)
Query: 249 RHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHW-------RLLNFD 301
+H+NI+ + A + G + V+ + G+L E+L + R+
Sbjct: 99 KHKNIINLLGACT---QDGPLY--VIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 302 FLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
K + +AR ++YL + H +L NVL+ + + + DF +AR + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 362 DEQTRFI-GKLNVRNFVKMALSQRV 385
D + G+L V+ AL RV
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRV 235
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G D T +AVK N R F +E ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS + VV + M +G L+ +L + + +++ + +A ++
Sbjct: 85 LLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
A + YL+ + H +L N ++ + +GDF M R + +TD
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + + T +GDFG+ R + ET + G + ++APE ++
Sbjct: 153 HRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 57 YGDVYSFGILLLEM 70
D++SFG++L E+
Sbjct: 212 SSDMWSFGVVLWEI 225
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 179 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 238
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 239 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 268
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Query: 197 FSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNIV 254
++ +IG G+FG VY L D G +A+K +++ + FK+ E + + H NIV
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQ---DKRFKNRELQIMRKLDHCNIV 110
Query: 255 RV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI--- 310
R+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIYV 158
Query: 311 ---AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 159 KLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFID---VMGTIGYVAPEY--GMGSEVS 55
H D+KP N+ LD L DFG + ET + +GT Y++PE G +
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADFGTCMKMD-ETGMVHCDTAVGTPDYISPEVLKSQGGD-G 254
Query: 56 SYG---DVYSFGILLLEMFTGLRP 76
YG D +S G+ L EM G P
Sbjct: 255 YYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 153 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 212
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 213 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 242
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 83
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 131
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 132 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 157 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 216
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 217 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 246
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 87
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 135
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 136 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 164 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 223
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 224 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 253
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 94
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 142
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 143 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 173 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI 232
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 233 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 262
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 103
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 151
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 152 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 179 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI 238
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 239 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 268
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Query: 197 FSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNIV 254
++ +IG G+FG VY L D G +A+K +++ + FK+ E + + H NIV
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQ---DKRFKNRELQIMRKLDHCNIV 110
Query: 255 RV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI--- 310
R+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIYV 158
Query: 311 ---AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 159 KLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + D +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + D G+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDRGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 181 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI 240
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 241 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 270
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Query: 197 FSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNIV 254
++ +IG G+FG VY L D G +A+K +++ + FK+ E + + H NIV
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQ---DKRFKNRELQIMRKLDHCNIV 112
Query: 255 RV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI--- 310
R+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIYV 160
Query: 311 ---AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 161 KLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 204
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 205 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 234
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 75
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 123
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 158 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI 217
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 218 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 247
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 88
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 136
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 137 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEV-SSY 57
H DLK N LD L DFG ++ + + +GT Y+APE + E
Sbjct: 137 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV 196
Query: 58 GDVYSFGILLLEMFTGLRP 76
DV+S G+ L M G P
Sbjct: 197 ADVWSCGVTLYVMLVGAYP 215
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 183 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI 242
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 243 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 272
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Query: 197 FSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNIV 254
++ +IG G+FG VY L D G +A+K +++ + FK+ E + + H NIV
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQ---DKRFKNRELQIMRKLDHCNIV 114
Query: 255 RV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI--- 310
R+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIYV 162
Query: 311 ---AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 163 KLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 204
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 205 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 234
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 75
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 123
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEY--GMGSE-- 53
H DLKP+N + D M L DFGIA + +T+ + +GT+ Y+ PE M S
Sbjct: 131 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 189
Query: 54 -------VSSYGDVYSFGILLLEMFTGLRP 76
+S DV+S G +L M G P
Sbjct: 190 NGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA-RFLPDT 361
L+ +H Q I H +LKP+N L+ D M+ + DF +A + PDT
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDT 161
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARF--LPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H DLKP N+ ++ L +FG+AR +PV +V+ T+ Y P+ G+++ S
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTS 182
Query: 59 -DVYSFGILLLEMFTGLRP 76
D++S G + E+ RP
Sbjct: 183 IDMWSAGCIFAELANAGRP 201
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 157 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 216
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 217 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 246
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 87
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 135
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 136 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 204
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 205 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 234
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 75
Query: 254 VRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAID 313
VR + Y K VVY + + E ++ + R +I KL +
Sbjct: 76 VR----LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQ 130
Query: 314 VARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEV-SSY 57
H DLK N LD L DFG ++ + + +GT Y+APE + E
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV 197
Query: 58 GDVYSFGILLLEMFTGLRP 76
DV+S G+ L M G P
Sbjct: 198 ADVWSCGVTLYVMLVGAYP 216
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 146 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 205
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 206 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 235
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 76
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 124
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 125 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRP-----GGARSFKSE 241
K +++ + + + +G+G +GSV FD T + V V L RP R+++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYR-E 71
Query: 242 CKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFD 301
+ +++H N++ + F P SLEE+ TH + +
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVTHLMGADLN 114
Query: 302 FLIK-KKLD------IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM 354
++K +KL + + R LKY+H I H +LKPSN+ ++++ + D +
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGL 171
Query: 355 ARFLPDTDEQTRFIG 369
AR DE T ++
Sbjct: 172 ARH--TDDEMTGYVA 184
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSN+ ++++ + D G+AR + + T Y APE + + D
Sbjct: 148 HRDLKPSNLAVNEDCELKILDGGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ TG
Sbjct: 206 IWSVGCIMAELLTG 219
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI 204
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 205 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 234
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 75
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 123
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFLPDTDEQT 365
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L +
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 366 RFI 368
+I
Sbjct: 181 SYI 183
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 149 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 208
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 209 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 238
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 79
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 127
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 128 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 150 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI 209
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 210 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 239
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + + FK+ E + + H NI
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 80
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 128
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 129 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEY--GMGSE-- 53
H DLKP+N + D M L DFGIA + +T+ + +GT+ Y+ PE M S
Sbjct: 178 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 236
Query: 54 -------VSSYGDVYSFGILLLEMFTGLRP 76
+S DV+S G +L M G P
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA-RFLPDT 361
L+ +H Q I H +LKP+N L+ D M+ + DF +A + PDT
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDT 208
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLP---VETSFID---VMGTIGYVAPEYGMGSE 53
H D+K NV L D A L DFG A L + S + + GT ++APE MG
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 54 VSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNL 87
+ D++S ++L M G P F+ L L
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 282
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSNV ++++ + DFG+AR + + T Y APE + + D
Sbjct: 146 HRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQTVD 203
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ G
Sbjct: 204 IWSVGCIMAELLQG 217
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFNLIRPGG----ARSFKS 240
K +++ +G+G +GSV Y+ L +AVK L RP AR
Sbjct: 13 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVK--KLSRPFQSLIHARRTYR 68
Query: 241 ECKAAINIRHRNIV---RVFTAVSGV-DYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWR 296
E + +++H N++ VFT + + D+ + N ++ D H +
Sbjct: 69 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK--CQALSDEHVQ 126
Query: 297 LLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
L + L R LKY+H I H +LKPSNV ++++ + DF +AR
Sbjct: 127 FLVYQLL------------RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLP---VETSFID---VMGTIGYVAPEYGMGSE 53
H D+K NV L D A L DFG A L + S + + GT ++APE MG
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 54 VSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNL 87
+ D++S ++L M G P F+ L L
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 266
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEY--GMGSE-- 53
H DLKP+N + D M L DFGIA + +T+ + +GT+ Y+ PE M S
Sbjct: 178 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 236
Query: 54 -------VSSYGDVYSFGILLLEMFTGLRP 76
+S DV+S G +L M G P
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA-RFLPDT 361
L+ +H Q I H +LKP+N L+ D M+ + DF +A + PDT
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDT 208
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI 204
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 205 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 234
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 30/183 (16%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + ++FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQGKAFKNRELQIMRKLDHCNI 75
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 123
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFLPDTDEQT 365
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L +
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 366 RFI 368
+I
Sbjct: 181 SYI 183
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI 204
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 205 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 234
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + ++FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQGKAFKNRELQIMRKLDHCNI 75
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAI 312
VR+ + S + + + +V ++P H + R +I KL +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-----YSRAKQTLPVIYVKLYM-Y 129
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 130 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFNLIRPGG----ARSFKS 240
K +++ +G+G +GSV Y+ L +AVK L RP AR
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVK--KLSRPFQSLIHARRTYR 76
Query: 241 ECKAAINIRHRNIV---RVFTAVSGV-DYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWR 296
E + +++H N++ VFT + + D+ + N ++ D H +
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS--QALSDEHVQ 134
Query: 297 LLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
L + L R LKY+H I H +LKPSNV ++++ + DF +AR
Sbjct: 135 FLVYQLL------------RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR 179
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSNV ++++ + DFG+AR + + T Y APE + + D
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ G
Sbjct: 212 IWSVGCIMAELLQG 225
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEY--GMGSE-- 53
H DLKP+N + D M L DFGIA + +T+ + +GT+ Y+ PE M S
Sbjct: 134 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 192
Query: 54 -------VSSYGDVYSFGILLLEMFTGLRP 76
+S DV+S G +L M G P
Sbjct: 193 NGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA-RFLPDT 361
L+ +H Q I H +LKP+N L+ D M+ + DF +A + PDT
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDT 164
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEV-SSY 57
H DLK N LD L DFG ++ + + +GT Y+APE + E
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKI 198
Query: 58 GDVYSFGILLLEMFTGLRP 76
DV+S G+ L M G P
Sbjct: 199 ADVWSCGVTLYVMLVGAYP 217
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI 204
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 205 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 234
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 30/183 (16%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNI 253
++ +IG G+FG VY L D G +A+K + ++FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQGKAFKNRELQIMRKLDHCNI 75
Query: 254 VRV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI-- 310
VR+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 123
Query: 311 ----AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFLPDTDEQT 365
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L +
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 366 RFI 368
+I
Sbjct: 181 SYI 183
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 19/167 (11%)
Query: 200 ANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFT 258
++G G FG T + G + +K R+F E K + H N+++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI- 73
Query: 259 AVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTH-WRLLNFDFLIKKKLDIAIDVARA 317
GV Y+ R + +++ G+L + D + W +++ A D+A
Sbjct: 74 ---GVLYKDKRLNFIT-EYIKGGTLRGIIKSMDSQYPW---------SQRVSFAKDIASG 120
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQ 364
+ YLH I H +L N L+ + V DF +AR + D Q
Sbjct: 121 MAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 15/85 (17%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL---------------PVETSFIDVMGTIGYVA 45
H DL N + + + DFG+AR + P V+G ++A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 46 PEYGMGSEVSSYGDVYSFGILLLEM 70
PE G DV+SFGI+L E+
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G + I V + L P + E ++ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 111 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 156
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 157 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 201
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 174 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 233
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 234 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 263
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA----RFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLK NV + E L DFG++ + L SFI GT ++APE M +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPEVVMCETMKD 196
Query: 57 Y-----GDVYSFGILLLEM 70
D++S GI L+EM
Sbjct: 197 TPYDYKADIWSLGITLIEM 215
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 22/171 (12%)
Query: 203 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVS 261
+G G FG VY + G A KV + E + H IV++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL---- 82
Query: 262 GVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDF-LIKKKLDIAI-DVARALK 319
G Y + ++ +F P G+++ +L D L + ++ + + AL
Sbjct: 83 GAYYHDGKL-WIMIEFCPGGAVDA----------IMLELDRGLTEPQIQVVCRQMLEALN 131
Query: 320 YLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM-ARFLPDTDEQTRFIG 369
+LH RI H +LK NVL+ E + DF + A+ L ++ FIG
Sbjct: 132 FLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIG 179
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD D L DFG A+ L + + + Y APE G ++ +S
Sbjct: 224 HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI 283
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVK 92
DV+S G +L E+ G +F D + LV+
Sbjct: 284 DVWSAGCVLAELLLG----QPIFPGDSGVDQLVE 313
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Query: 197 FSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNIV 254
++ +IG G+FG VY L D G +A+K +++ + FK+ E + + H NIV
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQ---DKRFKNRELQIMRKLDHCNIV 155
Query: 255 RV-FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI--- 310
R+ + S + + + +V ++P +T +R+ K+ L +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIYV 203
Query: 311 ---AIDVARALKYLHCDCQPRIAHCNLKPSNVLLD-DEMIGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD D + + DF A+ L
Sbjct: 204 KLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-- 58
H D+KPSNV ++ + DFGI+ +L + G Y+APE + E++ G
Sbjct: 177 HRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPER-INPELNQKGYS 235
Query: 59 ---DVYSFGILLLEM 70
D++S GI ++E+
Sbjct: 236 VKSDIWSLGITMIEL 250
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVG--DFSMARFLPDTDEQT 365
IA+ + +AL++LH + H ++KPSNVL++ +G V DF ++ +L D+ +T
Sbjct: 158 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLIN--ALGQVKMCDFGISGYLVDSVAKT 211
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKP N+ ++++ + DFG+AR E + V T Y APE + + D
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV--TRWYRAPEVILSWMHYNQTVD 206
Query: 60 VYSFGILLLEMFTG 73
++S G ++ EM TG
Sbjct: 207 IWSVGCIMAEMLTG 220
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 31/186 (16%)
Query: 179 KQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARS 237
KQ +N K ++ + S +G+G +GSV + G +A+K L RP +
Sbjct: 12 KQDVN----KTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEI 65
Query: 238 FKSECKAAI----NIRHRNIV---RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK 290
F + +++H N++ VFT S + R Y MP +
Sbjct: 66 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSL-----RNFYDFYLVMP--------FMQ 112
Query: 291 DDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVG 350
D +++ F +K + + + LKY+H + H +LKP N+ ++++ +
Sbjct: 113 TDLQ-KIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKIL 168
Query: 351 DFSMAR 356
DF +AR
Sbjct: 169 DFGLAR 174
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLP---VETSFID---VMGTIGYVAPEYGMGSE 53
H D+K NV L D A L DFG A L + S + + GT ++APE MG
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 54 VSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNL 87
+ D++S ++L M G P F+ L L
Sbjct: 247 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 280
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEY--GMGSE-- 53
H DLKP+N + D M L DFGIA + +T+ + +GT+ Y+ PE M S
Sbjct: 150 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 208
Query: 54 -------VSSYGDVYSFGILLLEMFTGLRP 76
+S DV+S G +L M G P
Sbjct: 209 NGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 30/186 (16%)
Query: 184 NLSFKDLYDATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGAR--SFKSE 241
NL F+ + +S IG+G V+ A+K NL S+++E
Sbjct: 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNE 76
Query: 242 CKAAINIRHRN--IVRVFTAVSGVDYQGARFKAVVYKFMPNGS--LEEWLHGKDDTH-WR 296
++ + I+R++ DY+ +Y M G+ L WL K W
Sbjct: 77 IAYLNKLQQHSDKIIRLY------DYEIT--DQYIYMVMECGNIDLNSWLKKKKSIDPWE 128
Query: 297 LLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA- 355
++ L+ +H Q I H +LKP+N L+ D M+ + DF +A
Sbjct: 129 RKSY-------------WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIAN 174
Query: 356 RFLPDT 361
+ PDT
Sbjct: 175 QMQPDT 180
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H +L N + + + DFG++R + T+ I + APE ++ S
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGI 423
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 21/159 (13%)
Query: 203 IGAGNFGSVYNGTLFDGT-TIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVS 261
+G G +G VY G + T+AVK F E I+H N+V++
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLL---- 282
Query: 262 GVDYQGARFKAVVYKFMPNGSLEEWLH--GKDDTHWRLLNFDFLIKKKLDIAIDVARALK 319
GV + F ++ +FM G+L ++L + + +L L +A ++ A++
Sbjct: 283 GVCTREPPF-YIITEFMTYGNLLDYLRECNRQEVSAVVL---------LYMATQISSAME 332
Query: 320 YLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
YL + H NL N L+ + + V DF ++R +
Sbjct: 333 YLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 368
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVET--SFIDVMGTIGYVAPEYGMGSEVSSYG 58
H +L N + + + DFG++R + +T + I + APE ++ S
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 440 DVWAFGVLLWEIATYGMSPYPGI 462
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 203 IGAGNFGSVYNGTLFDGT-TIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVS 261
+G G +G VY G + T+AVK F E I+H N+V++
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLL---- 321
Query: 262 GVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYL 321
GV + F ++ +FM G+L ++L + + + +N L L +A ++ A++YL
Sbjct: 322 GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAVVL----LYMATQISSAMEYL 373
Query: 322 HCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ H NL N L+ + + V DF ++R +
Sbjct: 374 E---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 407
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKPSNV ++++ + DFG+AR + + T Y APE + + D
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 60 VYSFGILLLEMFTG 73
++S G ++ E+ G
Sbjct: 212 IWSVGCIMAELLQG 225
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 188 KDLYDATNGFSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFNLIRPGG----ARSFKS 240
K +++ +G+G +GSV Y+ L +AVK L RP AR
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVK--KLSRPFQSLIHARRTYR 76
Query: 241 ECKAAINIRHRNIV---RVFTAVSGV-DYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWR 296
E + +++H N++ VFT + + D+ + N ++ D H +
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK--CQALSDEHVQ 134
Query: 297 LLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
L + L R LKY+H I H +LKPSNV ++++ + DF +AR
Sbjct: 135 FLVYQLL------------RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
Query: 1 HCDLKPSNVFLD-DEMTAHLGDFGIARFLPVE---TSFID---VMGTIGYVAPEYGMGSE 53
H D+K NV L D A L DFG A L + S + + GT ++APE +G
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 54 VSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNL-----PNLVKSALPARAEQILDVAFF 108
+ DV+S ++L M G P F+ L L P V+ P+ A L
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAP--LTAQAI 325
Query: 109 QEIEEEETLYKKASS 123
QE +E +++ +++
Sbjct: 326 QEGLRKEPIHRVSAA 340
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLP--VETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
H +L N + + + DFG++R + T+ I + APE ++ S
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 59 DVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+LL E+ T G+ P G+
Sbjct: 398 DVWAFGVLLWEIATYGMSPYPGI 420
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 203 IGAGNFGSVYNGTLFDGT-TIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVS 261
+G G +G VY G + T+AVK F E I+H N+V++
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLL---- 279
Query: 262 GVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYL 321
GV + F ++ +FM G+L ++L + + + +N L L +A ++ A++YL
Sbjct: 280 GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAVVL----LYMATQISSAMEYL 331
Query: 322 HCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ H NL N L+ + + V DF ++R +
Sbjct: 332 E---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 365
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA----RFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H DLK NV + E L DFG++ + L SFI GT ++APE M +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPEVVMCETMKD 188
Query: 57 Y-----GDVYSFGILLLEM 70
D++S GI L+EM
Sbjct: 189 TPYDYKADIWSLGITLIEM 207
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 22/171 (12%)
Query: 203 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVS 261
+G G FG VY + G A KV + E + H IV++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL---- 74
Query: 262 GVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDF-LIKKKLDIAI-DVARALK 319
G Y + ++ +F P G+++ +L D L + ++ + + AL
Sbjct: 75 GAYYHDGKL-WIMIEFCPGGAVDA----------IMLELDRGLTEPQIQVVCRQMLEALN 123
Query: 320 YLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSM-ARFLPDTDEQTRFIG 369
+LH RI H +LK NVL+ E + DF + A+ L ++ FIG
Sbjct: 124 FLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIG 171
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEY--GMGSE-- 53
H DLKP+N + D M L DFGIA + +T+ + +GT+ Y+ PE M S
Sbjct: 130 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 188
Query: 54 -------VSSYGDVYSFGILLLEMFTGLRP 76
+S DV+S G +L M G P
Sbjct: 189 NGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA-RFLPDT 361
L+ +H Q I H +LKP+N L+ D M+ + DF +A + PDT
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDT 160
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 150 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 209
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 210 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 239
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 87 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 132
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 133 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 177
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKP N+ ++++ + DFG+AR E + V T Y APE + + D
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV--TRWYRAPEVILSWMHYNQTVD 224
Query: 60 VYSFGILLLEMFTG 73
++S G ++ EM TG
Sbjct: 225 IWSVGCIMAEMLTG 238
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 31/186 (16%)
Query: 179 KQTINNLSFKDLYDATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARS 237
KQ +N K ++ + S +G+G +GSV + G +A+K L RP +
Sbjct: 30 KQDVN----KTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEI 83
Query: 238 FKSECKAAI----NIRHRNIV---RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGK 290
F + +++H N++ VFT S + R Y MP +
Sbjct: 84 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSL-----RNFYDFYLVMP--------FMQ 130
Query: 291 DDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVG 350
D +++ +F +K + + + LKY+H + H +LKP N+ ++++ +
Sbjct: 131 TDLQ-KIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKIL 186
Query: 351 DFSMAR 356
DF +AR
Sbjct: 187 DFGLAR 192
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEV-SSY 57
H DLK N LD L FG ++ + + D +GT Y+APE + E
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKV 197
Query: 58 GDVYSFGILLLEMFTGLRP 76
DV+S G+ L M G P
Sbjct: 198 ADVWSCGVTLYVMLVGAYP 216
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 122
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 66/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++ +G FG+VY G +G + + V P + E ++ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 122
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 122
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
HCDLKP N+ L + + + DFG + + + + Y APE +G+
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSSCY--EHQRVYTXIQSRFYRAPEVILGARYGMPI 280
Query: 59 DVYSFGILLLEMFTG 73
D++S G +L E+ TG
Sbjct: 281 DMWSLGCILAELLTG 295
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 298 LNFDFLIKKKLDIAIDVARALKYLHCDCQ-------PRIAHCNLKPSNVLLDDE 344
+N LIKK + K+ H Q RI HC+LKP N+LL +
Sbjct: 183 MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ 236
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 134 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 193
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 194 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 223
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 71 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 116
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 117 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 161
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 77 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 122
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 207 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 66/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++ +G FG+VY G +G + + V P + E ++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 129
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 130 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 200
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 201 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 78 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 123
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 124 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 26/180 (14%)
Query: 200 ANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GARSFKSECKAAINIRHRNIVRVF 257
LIG G FG VY+G +A+++ ++ R ++FK E A RH N+V
Sbjct: 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 258 TAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARA 317
A + A++ +L + R + K IA ++ +
Sbjct: 96 GACMSPPHL-----AIITSLCKGRTLYSVV--------RDAKIVLDVNKTRQIAQEIVKG 142
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDE--MIGHVGDFSMARFLPDTDEQTRFIGKLNVRN 375
+ YLH I H +LK NV D+ +I G FS++ L + R KL ++N
Sbjct: 143 MGYLHAKG---ILHKDLKSKNVFYDNGKVVITDFGLFSISGVL----QAGRREDKLRIQN 195
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
HCDLKP N+ L + + + DFG + + + + Y APE +G+
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSSCY--EHQRVYXXIQSRFYRAPEVILGARYGMPI 280
Query: 59 DVYSFGILLLEMFTG 73
D++S G +L E+ TG
Sbjct: 281 DMWSLGCILAELLTG 295
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 298 LNFDFLIKKKLDIAIDVARALKYLHCDCQ-------PRIAHCNLKPSNVLLDDE 344
+N LIKK + K+ H Q RI HC+LKP N+LL +
Sbjct: 183 MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ 236
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 137 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 196
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 197 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 226
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 74 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 119
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 120 CVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 164
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 200
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 201 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 78 PHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVREHKDN----IGSQYL----LNW 123
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 124 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 146 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 205
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 206 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 235
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 83 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 128
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 129 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 173
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 207 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 66/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++ +G FG+VY G +G + + V P + E ++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 84 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 129
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 130 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVREHKDN----IGSQYL----LNW 122
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 202
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 203 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 125
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 126 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 201
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 202 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 79 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 124
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 201
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 202 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 124
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
HCDLKP N+ L + + + DFG + + + + Y APE +G+
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSSCY--EHQRVYTXIQSRFYRAPEVILGARYGMPI 280
Query: 59 DVYSFGILLLEMFTG 73
D++S G +L E+ TG
Sbjct: 281 DMWSLGCILAELLTG 295
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 298 LNFDFLIKKKLDIAIDVARALKYLHCDCQ-------PRIAHCNLKPSNVLLDDE 344
+N LIKK + K+ H Q RI HC+LKP N+LL +
Sbjct: 183 MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ 236
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 202
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 203 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 125
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 126 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 207 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 129
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 130 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 202
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 203 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 125
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 126 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL----PVETSFIDVMGTIGYVAPE--YGMGSEV 54
H D+KP N+ +D L DFG L V++S +GT Y++PE M
Sbjct: 198 HRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV--AVGTPDYISPEILQAMEGGK 255
Query: 55 SSYG---DVYSFGILLLEMFTGLRP 76
YG D +S G+ + EM G P
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETP 280
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 22/157 (14%)
Query: 197 FSSANLIGAGNFGSVYNGTLFDGTTI-AVKVFN---LIRPGGARSFKSECKAAINIRHRN 252
F +IG G FG V L + + A+K+ N +++ F+ E +N +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 253 IVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAI 312
I + A +Q +V + G L L +D + +L ++ IAI
Sbjct: 136 ITTLHYA-----FQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYL--AEMVIAI 188
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHV 349
D L Y+H D +KP N+L+D M GH+
Sbjct: 189 DSVHQLHYVHRD---------IKPDNILMD--MNGHI 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 202
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 203 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 80 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 125
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 126 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 203
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 204 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 81 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 126
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF +A+ L
Sbjct: 127 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 171
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 33/194 (17%)
Query: 181 TINNLSFKDLYDATNG----------FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-- 227
T NL F+ +A N F ++G+G FG+VY G +G + + V
Sbjct: 16 TTENLYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK 75
Query: 228 ---NLIRPGGARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLE 284
P + E ++ + ++ R+ Q ++ + MP G L
Sbjct: 76 ELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLL 129
Query: 285 EWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDE 344
+++ D + +L L+ + +A+ + YL R+ H +L NVL+
Sbjct: 130 DYVREHKDN----IGSQYL----LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTP 178
Query: 345 MIGHVGDFSMARFL 358
+ DF +A+ L
Sbjct: 179 QHVKITDFGLAKLL 192
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG+A+ L E G I ++A E + +
Sbjct: 165 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 224
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV+S+G+ + E+ T G +P +G+
Sbjct: 225 SDVWSYGVTVWELMTFGSKPYDGI 248
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG----TIGYVAPEYGMGSEVSS 56
H DL N + + T +GDFG+ R + ET++ G + ++APE ++
Sbjct: 153 HRDLAARNCMVAHDFTVKIGDFGMTRDI-YETAYYRKGGKGLLPVRWMAPESLKDGVFTT 211
Query: 57 YGDVYSFGILLLEM 70
D++SFG++L E+
Sbjct: 212 SSDMWSFGVVLWEI 225
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 203 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGAR-SFKSECKAAINIRHRNIVR 255
+G G+FG VY G D T +AVK N R F +E ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHG-KDDTHWRLLNFDFLIKKKLDIAIDV 314
+ VS + VV + M +G L+ +L + + +++ + +A ++
Sbjct: 85 LLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 315 ARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDT 361
A + YL+ + H +L N ++ + +GDF M R + +T
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 31/100 (31%)
Query: 1 HCDLKPSNVFLDD-------------------------EMTAHLGDFGIARFLPVETSFI 35
H DLKP N+ LDD L DFG A F
Sbjct: 160 HTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG-- 217
Query: 36 DVMGTIGYVAPE--YGMGSEVSSYGDVYSFGILLLEMFTG 73
++ T Y APE +G +VSS D++SFG +L E++TG
Sbjct: 218 SIINTRQYRAPEVILNLGWDVSS--DMWSFGCVLAELYTG 255
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Query: 312 IDVARALKYLHCDCQPRIAHCNLKPSNVLLDD 343
I++ +AL YL + + H +LKP N+LLDD
Sbjct: 144 IEILKALNYLR---KMSLTHTDLKPENILLDD 172
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT----IGYVAPEYGMGSEVSS 56
H +L NV L + A + DFG+++ L + S+ + + APE + SS
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 57 YGDVYSFGILLLEMFT-GLRPNNGM 80
DV+S+G+ + E + G +P M
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKM 543
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 29/191 (15%)
Query: 203 IGAGNFGSVYNGTLF---DGTTIAVKVFNLIRPGGARSFKSECKAAINIRHR----NIVR 255
+G GNFGSV G +A+KV ++ G ++ E I H+ IVR
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKV---LKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 256 VFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVA 315
+ A +V + G L ++L GK + + + ++ V+
Sbjct: 401 LIGVCQ------AEALMLVMEMAGGGPLHKFLVGKRE--------EIPVSNVAELLHQVS 446
Query: 316 RALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL--PDTDEQTRFIGKLNV 373
+KYL + H NL NVLL + + DF +++ L D+ R GK +
Sbjct: 447 MGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 503
Query: 374 RNFVKMALSQR 384
+ + ++ R
Sbjct: 504 KWYAPECINFR 514
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGS-EVSSYGD 59
H DLKP N+ ++++ + DFG+AR ++ + T Y APE + + D
Sbjct: 151 HRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVVTRWYRAPEVILNWMRYTQTVD 208
Query: 60 VYSFGILLLEMFTG 73
++S G ++ EM TG
Sbjct: 209 IWSVGCIMAEMITG 222
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 30/164 (18%)
Query: 203 IGAGNFGSVYNGTLFDGTTIA-VKVFNLIRPGGARSFKS----ECKAAINIRHRNIV--- 254
+G+G +G+V + DG T A V + L RP + F E + ++RH N++
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 255 RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN--FDFLIKKKLDIAI 312
VFT +D + +V FM GK H +L FL+ + L
Sbjct: 91 DVFTPDETLDDFTDFY--LVMPFMGTDL------GKLMKHEKLGEDRIQFLVYQML---- 138
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
+ L+Y+H I H +LKP N+ ++++ + DF +AR
Sbjct: 139 ---KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFG----IARFLPVETSFIDVMGTIGYVAPEYGMGSEVSS 56
H D+K ++ L + L DFG I++ +P + GT ++APE S ++
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV---GTPYWMAPEVISRSLYAT 220
Query: 57 YGDVYSFGILLLEMFTGLRP 76
D++S GI+++EM G P
Sbjct: 221 EVDIWSLGIMVIEMVDGEPP 240
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 203 IGAGNFGSVYNGTLFDGTTIAVKVFNL----IRPGGARSFKSECKAAINIRHRNIVRVFT 258
IG G+F +VY G L TT+ V L + + FK E + ++H NIVR +
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 259 AVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARAL 318
+ +G + +V + +G+L+ +L +++ L + + L
Sbjct: 93 SWEST-VKGKKCIVLVTELXTSGTLKTYLK-----RFKVXKIKVL----RSWCRQILKGL 142
Query: 319 KYLHCDCQPRIAHCNLKPSNVLLDDEMIG-HVGDFSMA 355
++LH P I H +LK N+ + +GD +A
Sbjct: 143 QFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLA 179
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFG----IARFLPVETSFIDVMGTIGYVAPEY----GMGS 52
H D+K ++ L + L DFG +++ +P + GT ++APE G
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV---GTPYWMAPELISRLPYGP 326
Query: 53 EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVA 106
EV D++S GI+++EM G P + L +++ LP R + + V+
Sbjct: 327 EV----DIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVS 374
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 1 HCDLKPSNVFL---DDEMTAHLGDFGIARFLPVETSFI--DVMGTIGYVAPEYGMGSEVS 55
H D+KP NV L ++ LGDFG+A L E+ + +GT ++APE
Sbjct: 153 HRDVKPENVLLASKENSAPVKLGDFGVAIQLG-ESGLVAGGRVGTPHFMAPEVVKREPYG 211
Query: 56 SYGDVYSFGILLLEMFTGLRPNNG 79
DV+ G++L + +G P G
Sbjct: 212 KPVDVWGCGVILFILLSGCLPFYG 235
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-- 58
H D+KPSNV ++ + DFGI+ +L + + G Y+APE + E++ G
Sbjct: 133 HRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPER-INPELNQKGYS 191
Query: 59 ---DVYSFGILLLEM 70
D++S GI ++E+
Sbjct: 192 VKSDIWSLGITMIEL 206
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVG--DFSMARFLPD 360
IA+ + +AL++LH + H ++KPSNVL++ +G V DF ++ +L D
Sbjct: 114 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLIN--ALGQVKMCDFGISGYLVD 162
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 19/167 (11%)
Query: 196 GFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGARSFKS-ECKAAINIRHRNIV 254
+++ +IG G+FG V+ L + +A+K + + FK+ E + ++H N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIK-----KVLQDKRFKNRELQIMRIVKHPNVV 95
Query: 255 --RVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAI 312
+ F +G D + F +V +++P E ++ + +L ++ KL +
Sbjct: 96 DLKAFFYSNG-DKKDEVFLNLVLEYVP-----ETVYRASRHYAKLKQTMPMLLIKLYM-Y 148
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEM-IGHVGDFSMARFL 358
+ R+L Y+H I H ++KP N+LLD + + DF A+ L
Sbjct: 149 QLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 1 HCDLKPSNVFLDDEM-TAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMG-SEVSSYG 58
H D+KP N+ LD L DFG A+ L + + + Y APE G + ++
Sbjct: 164 HRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNI 223
Query: 59 DVYSFGILLLEMFTG 73
D++S G ++ E+ G
Sbjct: 224 DIWSTGCVMAELMQG 238
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFG----IARFLPVETSFIDVMGTIGYVAPE----YGMGS 52
H D+K ++ L + L DFG +++ +P + GT ++APE G+
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV---GTPYWMAPEVISRLPYGT 220
Query: 53 EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVA 106
EV D++S GI+++EM G P + L ++ +LP R + + V+
Sbjct: 221 EV----DIWSLGIMVIEMIDGEPPYFN--EPPLQAMRRIRDSLPPRVKDLHKVS 268
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA----RFLPVETSFIDVMGTIGYVAPEYGM--GSEV 54
H DLK N+ + L DFG++ R + SFI GT ++APE M S+
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI---GTPYWMAPEVVMCETSKD 214
Query: 55 SSY---GDVYSFGILLLEM 70
Y DV+S GI L+EM
Sbjct: 215 RPYDYKADVWSLGITLIEM 233
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETS-----FIDVMGTIGYVAPEYGMGSEVS 55
H D+K +NV + + L DFG+AR + + + + + T+ Y PE +G
Sbjct: 148 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER-- 205
Query: 56 SYG---DVYSFGILLLEMFT 72
YG D++ G ++ EM+T
Sbjct: 206 DYGPPIDLWGAGCIMAEMWT 225
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA----RFLPVETSFIDVMGTIGYVAPEYGM--GSEV 54
H DLK N+ + L DFG++ R + SFI GT ++APE M S+
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI---GTPYWMAPEVVMCETSKD 214
Query: 55 SSY---GDVYSFGILLLEM 70
Y DV+S GI L+EM
Sbjct: 215 RPYDYKADVWSLGITLIEM 233
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE--TSFIDVMGTIGYVAPEY--GMGSEVSS 56
H D+KP N+ LD L DFG + E +GT Y++PE G +
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD-GY 249
Query: 57 YG---DVYSFGILLLEMFTGLRP 76
YG D +S G+ L EM G P
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTP 272
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 26/179 (14%)
Query: 179 KQTINNLSFKDLYDATNGFSSANLIGAGNFGSV----YNGTLFDGTTIAVKVFNLIRPGG 234
K TIN + +DL + +IG G FG V + T + F +I+
Sbjct: 55 KDTINKI--RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD 112
Query: 235 ARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKD-DT 293
+ F E +V++F A +Q R+ +V ++MP G L + D
Sbjct: 113 SAFFWEERDIMAFANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPE 167
Query: 294 HWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
W ++ +A+D ++ ++H D +KP N+LLD + DF
Sbjct: 168 KWARF-----YTAEVVLALDAIHSMGFIHRD---------VKPDNMLLDKSGHLKLADF 212
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEY--GMGSE-- 53
H DLKP+N + D M L DFGIA + +T+ + +G + Y+ PE M S
Sbjct: 178 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRE 236
Query: 54 -------VSSYGDVYSFGILLLEMFTGLRP 76
+S DV+S G +L M G P
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 318 LKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMA-RFLPDT 361
L+ +H Q I H +LKP+N L+ D M+ + DF +A + PDT
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDT 208
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETS-----FIDVMGTIGYVAPEYGMGSEVS 55
H D+K +NV + + L DFG+AR + + + + + T+ Y PE +G
Sbjct: 148 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER-- 205
Query: 56 SYG---DVYSFGILLLEMFT 72
YG D++ G ++ EM+T
Sbjct: 206 DYGPPIDLWGAGCIMAEMWT 225
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE--TSFIDVMGTIGYVAPEY--GMGSEVSS 56
H D+KP N+ LD L DFG + E +GT Y++PE G +
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD-GY 254
Query: 57 YG---DVYSFGILLLEMFTGLRP 76
YG D +S G+ L EM G P
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTP 277
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 26/179 (14%)
Query: 179 KQTINNLSFKDLYDATNGFSSANLIGAGNFGSV----YNGTLFDGTTIAVKVFNLIRPGG 234
K TIN + +DL + +IG G FG V + T + F +I+
Sbjct: 60 KDTINKI--RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD 117
Query: 235 ARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKD-DT 293
+ F E +V++F A +Q R+ +V ++MP G L + D
Sbjct: 118 SAFFWEERDIMAFANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPE 172
Query: 294 HWRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
W ++ +A+D ++ ++H D +KP N+LLD + DF
Sbjct: 173 KWARF-----YTAEVVLALDAIHSMGFIHRD---------VKPDNMLLDKSGHLKLADF 217
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETS-----FIDVMGTIGYVAPEYGMGSEVS 55
H D+K +NV + + L DFG+AR + + + + + T+ Y PE +G
Sbjct: 147 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER-- 204
Query: 56 SYG---DVYSFGILLLEMFT 72
YG D++ G ++ EM+T
Sbjct: 205 DYGPPIDLWGAGCIMAEMWT 224
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETS-----FIDVMGTIGYVAPEYGMGSEVS 55
H D+K +NV + + L DFG+AR + + + + + T+ Y PE +G
Sbjct: 148 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER-- 205
Query: 56 SYG---DVYSFGILLLEMFT 72
YG D++ G ++ EM+T
Sbjct: 206 DYGPPIDLWGAGCIMAEMWT 225
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVE--TSFIDVMGTIGYVAPEY--GMGSEVSS 56
H D+KP N+ LD L DFG + E +GT Y++PE G +
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD-GY 254
Query: 57 YG---DVYSFGILLLEMFTGLRP 76
YG D +S G+ L EM G P
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTP 277
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 68/178 (38%), Gaps = 24/178 (13%)
Query: 179 KQTINNLSFKDLYDATNGFSSANLIGAGNFGSV----YNGTLFDGTTIAVKVFNLIRPGG 234
K TIN + +DL + +IG G FG V + T + F +I+
Sbjct: 60 KDTINKI--RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD 117
Query: 235 ARSFKSECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTH 294
+ F E +V++F A +Q R+ +V ++MP G L +
Sbjct: 118 SAFFWEERDIMAFANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMS------ 166
Query: 295 WRLLNFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDF 352
N+D K +V AL +H H ++KP N+LLD + DF
Sbjct: 167 ----NYDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADF 217
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFG----IARFLPVETSFIDVMGTIGYVAPEY----GMGS 52
H D+K ++ L + L DFG +++ +P + GT ++APE G
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV---GTPYWMAPELISRLPYGP 204
Query: 53 EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVA 106
EV D++S GI+++EM G P + L +++ LP R + + V+
Sbjct: 205 EV----DIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVS 252
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFG----IARFLPVETSFIDVMGTIGYVAPEY----GMGS 52
H D+K ++ L + L DFG +++ +P + GT ++APE G
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV---GTPYWMAPELISRLPYGP 206
Query: 53 EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVA 106
EV D++S GI+++EM G P + L +++ LP R + + V+
Sbjct: 207 EV----DIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVS 254
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + L DFG A+ S + T YVAPE +
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKS 197
Query: 58 GDVYSFGILLLEMFTGLRP---NNGM 80
D++S G+++ + G P N+G+
Sbjct: 198 CDMWSLGVIMYILLCGYPPFYSNHGL 223
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 1 HCDLKPSNVFLDDE-MTAHLGDFGIARFLPVETS----FIDVMGTIGYVAPEYGMG-SEV 54
H DLKP+N+F++ E + +GDFG+AR + S + + T Y +P + +
Sbjct: 143 HRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNY 202
Query: 55 SSYGDVYSFGILLLEMFTG 73
+ D+++ G + EM TG
Sbjct: 203 TKAIDMWAAGCIFAEMLTG 221
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFG----IARFLPVETSFIDVMGTIGYVAPEY----GMGS 52
H D+K ++ L + L DFG +++ +P + GT ++APE G
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV---GTPYWMAPELISRLPYGP 249
Query: 53 EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVA 106
EV D++S GI+++EM G P + L +++ LP R + + V+
Sbjct: 250 EV----DIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVS 297
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFG----IARFLPVETSFIDVMGTIGYVAPEY----GMGS 52
H D+K ++ L + L DFG +++ +P + GT ++APE G
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV---GTPYWMAPELISRLPYGP 195
Query: 53 EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVA 106
EV D++S GI+++EM G P + L +++ LP R + + V+
Sbjct: 196 EV----DIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVS 243
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFID-VMGTI--GYVAPEYGMGSEVSSY 57
H DL N+ + + + DFG++R + E S++ G I ++A E ++
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLNLPNLVKSA 94
DV+SFG+LL E+ T G P G+ + L NL+K+
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERLF--NLLKTG 268
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 16 TAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 208 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFG----IARFLPVETSFIDVMGTIGYVAPEY----GMGS 52
H D+K ++ L + L DFG +++ +P + GT ++APE G
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV---GTPYWMAPELISRLPYGP 199
Query: 53 EVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILDVA 106
EV D++S GI+++EM G P + L +++ LP R + + V+
Sbjct: 200 EV----DIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVS 247
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG A+ L E G I ++A E + +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 122
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF A+ L
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 167
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG A+ L E G I ++A E + +
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 201
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 202 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 79 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 124
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF A+ L
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG A+ L E G I ++A E + +
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 203
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 204 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 81 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 126
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF A+ L
Sbjct: 127 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 171
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG A+ L E G I ++A E + +
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 201
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 202 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 124
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF A+ L
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG A+ L E G I ++A E + +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 207 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 129
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF A+ L
Sbjct: 130 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 174
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---TIGYVAPEYGMGSEVSSY 57
H DL NV + + DFG A+ L E G I ++A E + +
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 201
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLN 86
DV+S+G+ + E+ T G +P +G+ +++
Sbjct: 202 SDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 23/168 (13%)
Query: 197 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVF-----NLIRPGGARSFKSECKAAINIRH 250
F ++G+G FG+VY G +G + + V P + E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 251 RNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDI 310
++ R+ Q ++ + MP G L +++ D + +L L+
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 124
Query: 311 AIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFL 358
+ +A+ + YL R+ H +L NVL+ + DF A+ L
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 16 TAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 198 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 17 AHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 189 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 16 TAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
HCDLKP N+ L + + + DFG + + + + Y +PE +G
Sbjct: 163 HCDLKPENILLCNPKRSAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYDLAI 220
Query: 59 DVYSFGILLLEMFTG 73
D++S G +L+EM TG
Sbjct: 221 DMWSLGCILVEMHTG 235
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 24/179 (13%)
Query: 202 LIGAGNFGSVYNG--TLFDGTTIAVKVFNLIRP---GGARSFKSECKAAINIRHRNIVRV 256
++G G FG VY G T G I V V + F SE N+ H +IV++
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
+ ++ + P G L +L ++ ++L ++ + +
Sbjct: 79 IGIIE------EEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLY-------SLQICK 124
Query: 317 ALKYLHC-DCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
A+ YL +C H ++ N+L+ +GDF ++R++ D D + +L ++
Sbjct: 125 AMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 179
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG--TIGYVAPEYGMGSEVSSYG 58
H D+ N+ + LGDFG++R++ E + + I +++PE ++
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 195
Query: 59 DVYSFGILLLEMFT-GLRP 76
DV+ F + + E+ + G +P
Sbjct: 196 DVWMFAVCMWEILSFGKQP 214
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 17 AHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 183 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 17 AHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 183 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 16 TAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFL--DDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
HCDLKP N+ L + DFG + + + + Y +PE +G
Sbjct: 182 HCDLKPENILLCNPKRXAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYDLAI 239
Query: 59 DVYSFGILLLEMFTG 73
D++S G +L+EM TG
Sbjct: 240 DMWSLGCILVEMHTG 254
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 15/90 (16%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFI---DVMGTIGYVAPEY--GMGSE-- 53
H DLKP+N + D M L DFGIA + + + +GT+ Y+ PE M S
Sbjct: 150 HSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRE 208
Query: 54 -------VSSYGDVYSFGILLLEMFTGLRP 76
+S DV+S G +L M G P
Sbjct: 209 NGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + L DFG A+ S T YVAPE +
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 243
Query: 58 GDVYSFGILLLEMFTGLRP---NNGM 80
D++S G+++ + G P N+G+
Sbjct: 244 CDMWSLGVIMYILLCGYPPFYSNHGL 269
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + L DFG A+ S T YVAPE +
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 199
Query: 58 GDVYSFGILLLEMFTGLRP---NNGM 80
D++S G+++ + G P N+G+
Sbjct: 200 CDMWSLGVIMYILLCGYPPFYSNHGL 225
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 24/179 (13%)
Query: 202 LIGAGNFGSVYNG--TLFDGTTIAVKVFNLIRP---GGARSFKSECKAAINIRHRNIVRV 256
++G G FG VY G T G I V V + F SE N+ H +IV++
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
+ ++ + P G L +L ++ ++L ++ + +
Sbjct: 91 IGIIE------EEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLY-------SLQICK 136
Query: 317 ALKYLHC-DCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
A+ YL +C H ++ N+L+ +GDF ++R++ D D + +L ++
Sbjct: 137 AMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 191
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG--TIGYVAPEYGMGSEVSSYG 58
H D+ N+ + LGDFG++R++ E + + I +++PE ++
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 207
Query: 59 DVYSFGILLLEMFT-GLRP 76
DV+ F + + E+ + G +P
Sbjct: 208 DVWMFAVCMWEILSFGKQP 226
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLG--DFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG 58
HCDLKP N+ L + + + DFG + + + + Y +PE +G
Sbjct: 182 HCDLKPENILLCNPKRSAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYDLAI 239
Query: 59 DVYSFGILLLEMFTG 73
D++S G +L+EM TG
Sbjct: 240 DMWSLGCILVEMHTG 254
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 24/179 (13%)
Query: 202 LIGAGNFGSVYNG--TLFDGTTIAVKVFNLIRP---GGARSFKSECKAAINIRHRNIVRV 256
++G G FG VY G T G I V V + F SE N+ H +IV++
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 257 FTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVAR 316
+ ++ + P G L +L ++ ++L ++ + +
Sbjct: 75 IGIIE------EEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLY-------SLQICK 120
Query: 317 ALKYLHC-DCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQTRFIGKLNVR 374
A+ YL +C H ++ N+L+ +GDF ++R++ D D + +L ++
Sbjct: 121 AMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 175
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG--TIGYVAPEYGMGSEVSSYG 58
H D+ N+ + LGDFG++R++ E + + I +++PE ++
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 191
Query: 59 DVYSFGILLLEMFT-GLRP 76
DV+ F + + E+ + G +P
Sbjct: 192 DVWMFAVCMWEILSFGKQP 210
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 19/180 (10%)
Query: 187 FKDLYDATNGFSSANLIGAGNFGSVYNGTLF--DGT--TIAVKVF--NLIRPGGARSFKS 240
+D+ F+ ++G G FGSV L DG+ +AVK+ ++I F
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 241 ECKAAINIRHRNIVRVFTAVSGVDYQGARF--KAVVYKFMPNGSLEEWLHGKDDTHWRLL 298
E H ++ ++ VS R V+ FM +G L +L R+
Sbjct: 75 EAACMKEFDHPHVAKL-VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLAS-----RIG 128
Query: 299 N--FDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMAR 356
F+ ++ + +D+A ++YL H +L N +L ++M V DF ++R
Sbjct: 129 ENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSR 185
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGT---IGYVAPEYGMGSEVSSY 57
H DL N L ++MT + DFG++R + + + + ++A E + + +
Sbjct: 160 HRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVH 219
Query: 58 GDVYSFGILLLEMFT-GLRPNNGM 80
DV++FG+ + E+ T G P G+
Sbjct: 220 SDVWAFGVTMWEIMTRGQTPYAGI 243
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 16 TAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 16 TAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 173 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + L DFG A+ S T YVAPE +
Sbjct: 190 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 249
Query: 58 GDVYSFGILLLEMFTGLRP---NNGM 80
D++S G+++ + G P N+G+
Sbjct: 250 CDMWSLGVIMYILLCGYPPFYSNHGL 275
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + L DFG A+ S T YVAPE +
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 199
Query: 58 GDVYSFGILLLEMFTGLRP---NNGM 80
D++S G+++ + G P N+G+
Sbjct: 200 CDMWSLGVIMYILLCGYPPFYSNHGL 225
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 16 TAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + L DFG A+ S T YVAPE +
Sbjct: 144 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 203
Query: 58 GDVYSFGILLLEMFTGLRP---NNGM 80
D++S G+++ + G P N+G+
Sbjct: 204 CDMWSLGVIMYILLCGYPPFYSNHGL 229
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 16 TAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + L DFG A+ S T YVAPE +
Sbjct: 145 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 204
Query: 58 GDVYSFGILLLEMFTGLRP---NNGM 80
D++S G+++ + G P N+G+
Sbjct: 205 CDMWSLGVIMYILLCGYPPFYSNHGL 230
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + L DFG A+ S T YVAPE +
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 197
Query: 58 GDVYSFGILLLEMFTGLRP---NNGM 80
D++S G+++ + G P N+G+
Sbjct: 198 CDMWSLGVIMYILLCGYPPFYSNHGL 223
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + L DFG A+ S T YVAPE +
Sbjct: 139 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 198
Query: 58 GDVYSFGILLLEMFTGLRP---NNGM 80
D++S G+++ + G P N+G+
Sbjct: 199 CDMWSLGVIMYILLCGYPPFYSNHGL 224
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 1 HCDLKPSNV-FLDDEMTAHL--GDFGIARFLPVETSFI--DVMGTIGYVAPEYGMGSEVS 55
H DLKP N+ +L E + + DFG+++ +E + I GT GYVAPE S
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 56 SYGDVYSFGILLLEMFTGLRP 76
D +S G++ + G P
Sbjct: 186 KAVDCWSIGVITYILLCGYPP 206
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + L DFG A+ S T YVAPE +
Sbjct: 146 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 205
Query: 58 GDVYSFGILLLEMFTGLRP---NNGM 80
D++S G+++ + G P N+G+
Sbjct: 206 CDMWSLGVIMYILLCGYPPFYSNHGL 231
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA----RFLPVETSFIDVMGTIGYVAPEYGM--GSEV 54
H DLK N+ + L DFG++ R + FI GT ++APE M S+
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI---GTPYWMAPEVVMCETSKD 214
Query: 55 SSY---GDVYSFGILLLEM 70
Y DV+S GI L+EM
Sbjct: 215 RPYDYKADVWSLGITLIEM 233
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 21/173 (12%)
Query: 197 FSSANLIGAGNFGSVYNGTLFDGT-TIAVKVF---NLIRPGGARSFKSECKAAINIRHRN 252
F +G G FG+VY +A+KV + + G + E + ++ H N
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 253 IVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAI 312
I+R++ + R ++ ++ P G L + L + FD ++ I
Sbjct: 85 ILRLYNY-----FYDRRRIYLILEYAPRGELYKELQ-------KSCTFDE--QRTATIME 130
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTDEQT 365
++A AL Y H ++ H ++KP N+LL + + DF + P +T
Sbjct: 131 ELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT 180
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDV 60
H D+KP N+ L + + DFG + P + GT+ Y+ PE G + D+
Sbjct: 146 HRDIKPENLLLGLKGELKIADFGWSVHAP-SLRRKTMCGTLDYLPPEMIEGRMHNEKVDL 204
Query: 61 YSFGILLLEMFTGLRP 76
+ G+L E+ G P
Sbjct: 205 WCIGVLCYELLVGNPP 220
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPE-YGMGSEVSSYGD 59
+ DLKP N+ L +E + ++R SF + GT G+ APE G V++ D
Sbjct: 205 YNDLKPENIMLTEEQLKLIDLGAVSRI----NSFGYLYGTPGFQAPEIVRTGPTVAT--D 258
Query: 60 VYSFGILLLEMFTGLRPNNGMFKDDL 85
+Y+ G L + L NG + D L
Sbjct: 259 IYTVGRTLAALTLDLPTRNGRYVDGL 284
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 248 IRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKK 307
+ H +IV++F V D G +V +++ SL+ R + +
Sbjct: 136 VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK-----------RSKGQKLPVAEA 184
Query: 308 LDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMI 346
+ +++ AL YLH + + +LKP N++L +E +
Sbjct: 185 IAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEEQL 220
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + L DFG A+ S T YVAPE +
Sbjct: 154 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 213
Query: 58 GDVYSFGILLLEMFTGLRP---NNGM 80
D++S G+++ + G P N+G+
Sbjct: 214 CDMWSLGVIMYILLCGYPPFYSNHGL 239
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 23/100 (23%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMG---------------TIGYVA 45
H DLKP+N+ L DE L D G + + I V G TI Y A
Sbjct: 157 HRDLKPTNILLGDEGQPVLMDLG-----SMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 46 PE-YGMGSE--VSSYGDVYSFGILLLEMFTGLRPNNGMFK 82
PE + + S + DV+S G +L M G P + +F+
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 16 TAHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 199 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 17 AHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+AR + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 223 AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Query: 1 HCDLKPSNVFLDD-EMTAHLGDFGIARFL----PVETSFIDVMGTIGYVAPEYGMGSEVS 55
H D+K NV ++ + DFG ++ L P +F GT+ Y+APE +
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEI-IDKGPR 200
Query: 56 SYG---DVYSFGILLLEMFTGLRP 76
YG D++S G ++EM TG P
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG-- 58
H D+KPSNV ++ DFGI+ +L + + G Y APE + E++ G
Sbjct: 160 HRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPER-INPELNQKGYS 218
Query: 59 ---DVYSFGILLLEM 70
D++S GI +E+
Sbjct: 219 VKSDIWSLGITXIEL 233
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVG--DFSMARFLPD 360
IA+ + +AL++LH + H ++KPSNVL++ +G V DF ++ +L D
Sbjct: 141 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLIN--ALGQVKXCDFGISGYLVD 189
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFID-VMGTI--GYVAPEYGMGSEVSSY 57
H DL N+ + + + DFG++R + E S + G I ++A E ++
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLNLPNLVKSA 94
DV+SFG+LL E+ T G P G+ + L NL+K+
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERLF--NLLKTG 268
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFID-VMGTI--GYVAPEYGMGSEVSSY 57
H DL N+ + + + DFG++R + E S + G I ++A E ++
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 58 GDVYSFGILLLEMFT-GLRPNNGMFKDDLNLPNLVKSA 94
DV+SFG+LL E+ T G P G+ + L NL+K+
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERLF--NLLKTG 268
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 1 HCDLKPSNVFLD------DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEV 54
H D+KP NV ++ + + + D G A + + + + + T Y +PE +G+
Sbjct: 155 HTDIKPENVLMEIVDSPENLIQIKIADLGNACW--YDEHYTNSIQTREYRSPEVLLGAPW 212
Query: 55 SSYGDVYSFGILLLEMFTG---LRPNNG--MFKDDLNLPNLVK 92
D++S L+ E+ TG P+ G KDD ++ +++
Sbjct: 213 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 1 HCDLKPSNVFLD------DEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEV 54
H D+KP NV ++ + + + D G A + + + + + T Y +PE +G+
Sbjct: 155 HTDIKPENVLMEIVDSPENLIQIKIADLGNACW--YDEHYTNSIQTREYRSPEVLLGAPW 212
Query: 55 SSYGDVYSFGILLLEMFTG---LRPNNG--MFKDDLNLPNLVK 92
D++S L+ E+ TG P+ G KDD ++ +++
Sbjct: 213 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Query: 1 HCDLKPSNVFLDDE---MTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + L DFG A+ S T YVAPE +
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 243
Query: 58 GDVYSFGILLLEMFTGLRP---NNGM 80
D +S G++ + G P N+G+
Sbjct: 244 CDXWSLGVIXYILLCGYPPFYSNHGL 269
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 13/80 (16%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA-----RFLPVETSFIDVMGTIGYVAPEYGM--GSE 53
H DLK N+ + L DFG++ + SFI GT ++APE M S+
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI---GTPYWMAPEVVMCETSK 187
Query: 54 VSSY---GDVYSFGILLLEM 70
Y DV+S GI L+EM
Sbjct: 188 DRPYDYKADVWSLGITLIEM 207
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 17 AHLGDFGIARFLPVETSFID---VMGTIGYVAPEYGMGSEVSSYGDVYSFGILLLEMFT 72
A +GDFG+A+ + + + M + ++ PE M +S D +SFG+LL E+F+
Sbjct: 183 AKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 214 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 256
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 21/143 (14%)
Query: 203 IGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGARSFKSECKAAINIRHRNIVRVFTAVS 261
+G G + V+ + + + VK+ ++P K E K N+R + T
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKI---LKPVKKNKIKREIKILENLR--GGPNIITLAD 99
Query: 262 GVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALKYL 321
V +R A+V++ + N ++ D R ++ L +AL Y
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEIL------------KALDYC 147
Query: 322 HCDCQPRIAHCNLKPSNVLLDDE 344
H I H ++KP NV++D E
Sbjct: 148 HSMG---IMHRDVKPHNVMIDHE 167
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Query: 1 HCDLKPSNVFLDD-EMTAHLGDFGIARFL----PVETSFIDVMGTIGYVAPEYGMGSEVS 55
H D+K NV ++ + DFG ++ L P +F GT+ Y+APE +
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF---TGTLQYMAPEI-IDKGPR 186
Query: 56 SYG---DVYSFGILLLEMFTGLRP 76
YG D++S G ++EM TG P
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 154 HRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 214 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 256
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 214 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 256
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 214 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 256
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 214 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 256
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 21/123 (17%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSF--IDVMGTIGYVAPEYGMGSEVSSYG 58
H D+KP N+ LD L DFG L + + + +GT Y++PE
Sbjct: 185 HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 59 -------DVYSFGILLLEMFTGLRPNNG-----------MFKDDLNLPNLVKSALPARAE 100
D ++ G+ EMF G P +K+ L+LP LV +P A
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLP-LVDEGVPEEAR 303
Query: 101 QIL 103
+
Sbjct: 304 DFI 306
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 153 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 212
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 213 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 255
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 21/93 (22%)
Query: 1 HCDLKPSNVFL---DDEMTAHLG----------------DFGIARFLPVETSFIDVMGTI 41
H DLKP N+ D E+T +L DFG A F S I + T
Sbjct: 160 HTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTI--VSTR 217
Query: 42 GYVAPEYGMGSEVSSYGDVYSFGILLLEMFTGL 74
Y APE + S DV+S G ++ E + G
Sbjct: 218 HYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF 250
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 214 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 256
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 214 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 256
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 153 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 212
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 213 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 255
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 214 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 256
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 152 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 211
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 212 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 254
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 214 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 256
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 214 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 256
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 214 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 256
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D E L D+G+A F + + + + PE + ++ Y
Sbjct: 159 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 218
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQILD 104
D++S G +L M P F N LV+ A E + D
Sbjct: 219 DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVRIAKVLGTEDLYD 261
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D + L D+G+A F + + + + PE + ++ Y
Sbjct: 155 HRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSL 214
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSA 94
D++S G +L M P F N LV+ A
Sbjct: 215 DMWSLGCMLASMIFRREP---FFHGQDNYDQLVRIA 247
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGDVY 61
DLK N+ LD + + DFG+ + + + + GT Y+APE ++ D +
Sbjct: 277 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 336
Query: 62 SFGILLLEMFTGLRP 76
G+++ EM G P
Sbjct: 337 GLGVVMYEMMCGRLP 351
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVM-GTIGYVAPEYGMGSEVSSYGDVY 61
DLK N+ LD + + DFG+ + + + + GT Y+APE ++ D +
Sbjct: 274 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 333
Query: 62 SFGILLLEMFTGLRP 76
G+++ EM G P
Sbjct: 334 GLGVVMYEMMCGRLP 348
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 1 HCDLKPSNVFLDDEMTA-HLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KP NV +D + L D+G+A F + + + + PE + ++ Y
Sbjct: 160 HRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSL 219
Query: 59 DVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSA 94
D++S G +L M P F N LV+ A
Sbjct: 220 DMWSLGCMLASMIFRREP---FFHGQDNYDQLVRIA 252
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFL---PVETSFIDVMGTIGYVAPEYGMGSEVSS- 56
H D+KP N+ L T + G+A L + + G+ + PE G + S
Sbjct: 132 HKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSG 191
Query: 57 -YGDVYSFGILLLEMFTGLRPNNG 79
D++S G+ L + TGL P G
Sbjct: 192 FKVDIWSAGVTLYNITTGLYPFEG 215
>pdb|1XEA|A Chain A, Crystal Structure Of A Gfo/idh/moca Family Oxidoreductase
From Vibrio Cholerae
pdb|1XEA|B Chain B, Crystal Structure Of A Gfo/idh/moca Family Oxidoreductase
From Vibrio Cholerae
pdb|1XEA|C Chain C, Crystal Structure Of A Gfo/idh/moca Family Oxidoreductase
From Vibrio Cholerae
pdb|1XEA|D Chain D, Crystal Structure Of A Gfo/idh/moca Family Oxidoreductase
From Vibrio Cholerae
Length = 323
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 10/93 (10%)
Query: 19 LGDFGIARFLPVETSFIDVM--------GTIGYVAPEYGMGSEVSSYGDVYSFGI--LLL 68
LGD +LPV + D+ +G +A Y + + + Y DV +G+ + +
Sbjct: 10 LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVXI 69
Query: 69 EMFTGLRPNNGMFKDDLNLPNLVKSALPARAEQ 101
T + F L +P V L A A++
Sbjct: 70 HAATDVHSTLAAFFLHLGIPTFVDKPLAASAQE 102
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE-VSSYGD 59
H DL P N+ L D + DF +AR + + + Y APE M + + D
Sbjct: 157 HRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVD 216
Query: 60 VYSFGILLLEMF 71
++S G ++ EMF
Sbjct: 217 MWSAGCVMAEMF 228
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIA-RFLPVETSFIDVMGTIGYVAPEYGMGSEVSSYG- 58
H D+KPSN+ + ++ + DFG++ F + + +GT ++APE + G
Sbjct: 160 HRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGK 219
Query: 59 --DVYSFGILLLEMFTGLRP 76
DV++ G+ L G P
Sbjct: 220 ALDVWAMGVTLYCFVFGQCP 239
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 313 DVARALKYLHCDCQPRIAHCNLKPSNVLLDDEMIGHVGDFSMARFLPDTD 362
D+ + ++YLH +I H ++KPSN+L+ ++ + DF ++ +D
Sbjct: 145 DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 34/176 (19%)
Query: 203 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSFKSECKAAIN--IRHRNIVRVFTA 259
IG G F V L G A K+ N + K E +A I ++H NIVR+ +
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 260 VSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLNFDFLIKKKLDIAIDVARALK 319
+S +G F +V+ + G L F+ ++ ++ D + ++
Sbjct: 72 ISE---EG--FHYLVFDLVTGGEL----------------FEDIVAREYYSEADASHCIQ 110
Query: 320 -----YLHCDCQPRIAHCNLKPSNVLLDDEMIG---HVGDFSMARFLPDTDEQTRF 367
LHC Q + H +LKP N+LL + G + DF +A D+Q F
Sbjct: 111 QILEAVLHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWF 164
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 1 HCDLKPSNVFLDDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSE-VSSYGD 59
H DL P N+ L D + DF +AR + + + Y APE M + + D
Sbjct: 157 HRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVD 216
Query: 60 VYSFGILLLEMF 71
++S G ++ EMF
Sbjct: 217 MWSAGCVMAEMF 228
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 36/164 (21%)
Query: 187 FKDLYDATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGARS--FKS--- 240
F+D+Y +++G G V L AVK+ +PG RS F+
Sbjct: 10 FEDVYQLQE-----DVLGEGAHARVQTCINLITSQEYAVKIIEK-QPGHIRSRVFREVEM 63
Query: 241 --ECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLL 298
+C+ HRN++ + D RF +V++ M GS+ +H + H+ L
Sbjct: 64 LYQCQG-----HRNVLELIEFFEEED----RFY-LVFEKMRGGSILSHIHKR--RHFNEL 111
Query: 299 NFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLD 342
+++ DVA AL +LH IAH +LKP N+L +
Sbjct: 112 EASVVVQ-------DVASALDFLH---NKGIAHRDLKPENILCE 145
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 36/164 (21%)
Query: 187 FKDLYDATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGARS--FKS--- 240
F+D+Y +++G G V L AVK+ +PG RS F+
Sbjct: 10 FEDVYQLQE-----DVLGEGAHARVQTCINLITSQEYAVKIIEK-QPGHIRSRVFREVEM 63
Query: 241 --ECKAAINIRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLL 298
+C+ HRN++ + D RF +V++ M GS+ +H + H+ L
Sbjct: 64 LYQCQG-----HRNVLELIEFFEEED----RFY-LVFEKMRGGSILSHIHKR--RHFNEL 111
Query: 299 NFDFLIKKKLDIAIDVARALKYLHCDCQPRIAHCNLKPSNVLLD 342
+++ DVA AL +LH IAH +LKP N+L +
Sbjct: 112 EASVVVQ-------DVASALDFLH---NKGIAHRDLKPENILCE 145
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR-FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLK N+ LD + + DFG+ + + + GT Y+APE ++ D +
Sbjct: 136 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 195
Query: 62 SFGILLLEMFTGLRP 76
G+++ EM G P
Sbjct: 196 GLGVVMYEMMCGRLP 210
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 310 IAIDVARALKYLHCDCQPRIAHCNLKPSNVLL 341
I V + L YLH C RI H ++KP N+LL
Sbjct: 151 IIQQVLQGLDYLHTKC--RIIHTDIKPENILL 180
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR-FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLK N+ LD + + DFG+ + + + GT Y+APE ++ D +
Sbjct: 135 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 194
Query: 62 SFGILLLEMFTGLRP 76
G+++ EM G P
Sbjct: 195 GLGVVMYEMMCGRLP 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 3 DLKPSNVFLDDEMTAHLGDFGIAR-FLPVETSFIDVMGTIGYVAPEYGMGSEVSSYGDVY 61
DLK N+ LD + + DFG+ + + + GT Y+APE ++ D +
Sbjct: 134 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 193
Query: 62 SFGILLLEMFTGLRP 76
G+++ EM G P
Sbjct: 194 GLGVVMYEMMCGRLP 208
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 1 HCDLKPSNVFLD--DEMTAHLGDFGIA-RFLP--VETSFIDVM-----GTIGYVAPEYGM 50
H D+K SN+ L+ + +L D+G+A R+ P V + + GTI + + +
Sbjct: 175 HGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHN 234
Query: 51 GSEVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSA 94
G S GD+ G +++ TG P ++D+L P V+ +
Sbjct: 235 GVAPSRRGDLEILGYCMIQWLTGHLP----WEDNLKDPKYVRDS 274
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 1 HCDLKPSNVFLD--DEMTAHLGDFGIA-RFLP--VETSFIDVM-----GTIGYVAPEYGM 50
H D+K SN+ L+ + +L D+G+A R+ P V + + GTI + + +
Sbjct: 175 HGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHN 234
Query: 51 GSEVSSYGDVYSFGILLLEMFTGLRPNNGMFKDDLNLPNLVKSA 94
G S GD+ G +++ TG P ++D+L P V+ +
Sbjct: 235 GVAPSRRGDLEILGYCMIQWLTGHLP----WEDNLKDPKYVRDS 274
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 1 HCDLKPSNVFL---DDEMTAHLGDFGIARFLPVETSFIDVMGTIGYVAPEYGMGSEVSSY 57
H D+KP N+ + + L DFG A+ + + T YVAPE +
Sbjct: 132 HRDVKPENLLYTSKEKDAVLKLTDFGFAKET-TQNALQTPCYTPYYVAPEVLGPEKYDKS 190
Query: 58 GDVYSFGILLLEMFTGLRP 76
D++S G+++ + G P
Sbjct: 191 CDMWSLGVIMYILLCGFPP 209
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 39/184 (21%)
Query: 183 NNLSFKDLYDATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGARSFKSE 241
NL F+ +Y +G G F V + G A K+ N + K E
Sbjct: 16 ENLYFQSMYQLFEE------LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE 69
Query: 242 CKAAIN--IRHRNIVRVFTAVSGVDYQGARFKAVVYKFMPNGSLEEWLHGKDDTHWRLLN 299
+A I ++H NIVR+ ++S +G + +++ + G L
Sbjct: 70 REARICRLLKHPNIVRLHDSISE---EGHHY--LIFDLVTGGEL---------------- 108
Query: 300 FDFLIKKKLDIAIDVARALK-----YLHCDCQPRIAHCNLKPSNVLLDDEMIG---HVGD 351
F+ ++ ++ D + ++ LHC Q + H +LKP N+LL ++ G + D
Sbjct: 109 FEDIVAREYYSEADASHCIQQILEAVLHCH-QMGVVHRDLKPENLLLASKLKGAAVKLAD 167
Query: 352 FSMA 355
F +A
Sbjct: 168 FGLA 171
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,307,517
Number of Sequences: 62578
Number of extensions: 548821
Number of successful extensions: 3979
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 520
Number of HSP's that attempted gapping in prelim test: 1672
Number of HSP's gapped (non-prelim): 1975
length of query: 485
length of database: 14,973,337
effective HSP length: 103
effective length of query: 382
effective length of database: 8,527,803
effective search space: 3257620746
effective search space used: 3257620746
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)