Query 041236
Match_columns 281
No_of_seqs 113 out of 1320
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:13:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041236.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041236hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vpj_A Kelch-like protein 12; 98.8 1.1E-06 3.8E-11 76.4 22.8 222 2-249 42-285 (301)
2 3ii7_A Kelch-like protein 7; p 98.8 1.3E-06 4.6E-11 76.0 22.1 221 2-250 35-280 (306)
3 1zgk_A Kelch-like ECH-associat 98.7 1.5E-06 5E-11 76.1 20.0 223 2-250 50-295 (308)
4 2xn4_A Kelch-like protein 2; s 98.7 4.3E-06 1.5E-10 72.6 22.2 206 18-249 57-283 (302)
5 4asc_A Kelch repeat and BTB do 98.6 7.1E-06 2.4E-10 71.8 21.0 219 3-248 25-283 (315)
6 2woz_A Kelch repeat and BTB do 98.6 1.6E-05 5.4E-10 69.7 22.0 219 3-248 36-293 (318)
7 2vpj_A Kelch-like protein 12; 98.4 8.1E-05 2.8E-09 64.4 21.8 226 21-273 13-261 (301)
8 3ii7_A Kelch-like protein 7; p 98.2 0.00018 6.2E-09 62.4 18.2 180 2-198 81-284 (306)
9 1zgk_A Kelch-like ECH-associat 98.1 0.00023 7.8E-09 62.0 18.5 180 2-198 101-299 (308)
10 2xn4_A Kelch-like protein 2; s 98.0 0.00027 9.2E-09 61.1 16.7 174 2-192 88-282 (302)
11 2uvk_A YJHT; unknown function, 98.0 0.00043 1.5E-08 61.3 18.0 230 15-273 12-324 (357)
12 4asc_A Kelch repeat and BTB do 97.9 0.00066 2.2E-08 59.1 17.9 174 2-192 78-283 (315)
13 2woz_A Kelch repeat and BTB do 97.8 0.0013 4.4E-08 57.3 16.9 174 2-192 89-293 (318)
14 2zwa_A Leucine carboxyl methyl 97.7 0.0027 9.3E-08 61.9 20.2 209 21-251 396-644 (695)
15 2uvk_A YJHT; unknown function, 97.6 0.014 4.8E-07 51.4 21.6 223 2-248 44-348 (357)
16 1k3i_A Galactose oxidase precu 96.9 0.067 2.3E-06 51.4 19.3 62 180-249 433-504 (656)
17 2zwa_A Leucine carboxyl methyl 95.4 0.25 8.4E-06 48.1 14.0 174 2-190 423-639 (695)
18 1k3i_A Galactose oxidase precu 92.9 0.68 2.3E-05 44.3 11.1 141 95-248 157-329 (656)
19 2ojh_A Uncharacterized protein 68.4 43 0.0015 26.6 19.3 196 17-249 47-265 (297)
20 4gqb_B Methylosome protein 50; 67.1 59 0.002 27.7 15.3 100 130-248 192-295 (344)
21 2z2n_A Virginiamycin B lyase; 62.9 58 0.002 26.1 21.3 96 129-246 203-299 (299)
22 4e54_B DNA damage-binding prot 62.0 63 0.0021 28.2 10.7 18 36-53 140-157 (435)
23 1evh_A WH1 domain, protein (ME 60.0 16 0.00054 26.5 5.1 54 37-101 10-65 (112)
24 1l0q_A Surface layer protein; 60.0 78 0.0027 26.7 20.2 96 130-248 96-195 (391)
25 3v9f_A Two-component system se 58.2 1.3E+02 0.0045 28.7 20.2 108 118-249 508-618 (781)
26 3nol_A Glutamine cyclotransfer 55.8 90 0.0031 26.1 13.7 99 129-250 64-164 (262)
27 1l0q_A Surface layer protein; 53.9 99 0.0034 26.0 20.4 172 36-248 94-281 (391)
28 3ei3_B DNA damage-binding prot 52.4 1.1E+02 0.0036 25.9 19.9 96 130-245 185-285 (383)
29 3g4e_A Regucalcin; six bladed 52.1 97 0.0033 25.4 19.7 35 211-251 204-239 (297)
30 3u4y_A Uncharacterized protein 52.0 97 0.0033 25.3 20.8 184 19-245 6-210 (331)
31 3jro_A Fusion protein of prote 51.3 1.7E+02 0.0058 27.9 16.3 56 176-243 179-239 (753)
32 3vgz_A Uncharacterized protein 49.7 1.1E+02 0.0037 25.2 24.6 100 130-248 206-309 (353)
33 3mbr_X Glutamine cyclotransfer 49.0 1.1E+02 0.0038 25.2 15.8 98 129-250 42-142 (243)
34 4gga_A P55CDC, cell division c 47.5 1.4E+02 0.0047 25.8 18.9 28 20-54 114-141 (420)
35 3bws_A Protein LP49; two-domai 46.9 1.4E+02 0.0047 25.6 20.8 190 20-248 178-396 (433)
36 2hqs_A Protein TOLB; TOLB, PAL 45.3 1.5E+02 0.0052 25.7 18.5 178 38-248 159-350 (415)
37 3hfq_A Uncharacterized protein 45.2 1.3E+02 0.0045 24.9 15.1 121 115-248 50-178 (347)
38 1k8k_C P40, ARP2/3 complex 41 41.5 1.5E+02 0.0051 24.4 10.3 70 164-248 20-89 (372)
39 1ddw_A GLGF-domain protein hom 40.1 27 0.00093 25.6 3.6 41 37-90 10-51 (120)
40 3dsm_A Uncharacterized protein 38.4 1.7E+02 0.0059 24.3 17.1 117 114-247 93-217 (328)
41 1egx_A VAsp, vasodilator-stimu 37.2 53 0.0018 23.8 4.8 55 37-101 10-67 (115)
42 3scy_A Hypothetical bacterial 36.9 1.8E+02 0.0062 24.1 15.5 105 130-248 233-345 (361)
43 1i2h_A PSD-ZIP45(homer-1C/VESL 34.6 36 0.0012 26.6 3.7 41 37-90 15-56 (168)
44 2mad_H Methylamine dehydrogena 34.5 1.4E+02 0.0048 25.8 8.1 58 179-248 298-356 (373)
45 3jrp_A Fusion protein of prote 33.3 2E+02 0.0068 23.6 19.8 65 164-243 172-241 (379)
46 4a2l_A BT_4663, two-component 32.8 3.3E+02 0.011 25.9 20.1 114 116-249 321-443 (795)
47 2dk7_A Transcription elongatio 32.6 32 0.0011 22.9 2.6 22 36-57 28-49 (73)
48 2jp2_A Spred-2, sprouty-relate 32.6 76 0.0026 23.4 5.1 53 37-101 19-78 (126)
49 3sjl_D Methylamine dehydrogena 29.8 1.4E+02 0.0046 26.5 7.2 122 115-254 237-376 (386)
50 1rmk_A MU-O-conotoxin mrvib; b 29.2 8.6 0.00029 20.7 -0.5 13 16-28 15-27 (31)
51 3e5z_A Putative gluconolactona 27.0 2.4E+02 0.0083 22.5 20.4 100 130-251 153-255 (296)
52 2hqs_A Protein TOLB; TOLB, PAL 26.3 3.1E+02 0.011 23.6 19.5 176 38-248 203-393 (415)
53 1xod_A Spred1; sprouty, EVH1, 25.4 67 0.0023 23.3 3.6 53 37-101 10-69 (118)
54 3fm0_A Protein CIAO1; WDR39,SG 24.8 3E+02 0.01 22.8 17.4 53 176-240 171-223 (345)
55 3nok_A Glutaminyl cyclase; bet 22.9 3.3E+02 0.011 22.7 12.7 95 132-250 77-173 (268)
56 2qc5_A Streptogramin B lactona 22.7 2.8E+02 0.0096 21.8 21.2 189 16-249 24-224 (300)
57 2dg1_A DRP35, lactonase; beta 22.4 3.1E+02 0.011 22.2 13.5 119 114-248 54-177 (333)
58 3dsm_A Uncharacterized protein 22.0 3.4E+02 0.012 22.4 17.8 105 130-252 203-312 (328)
59 3vl1_A 26S proteasome regulato 21.5 3.6E+02 0.012 22.6 18.3 99 130-242 313-419 (420)
60 4aow_A Guanine nucleotide-bind 21.1 3.2E+02 0.011 21.9 17.5 97 130-244 237-339 (340)
61 3enb_A PRE-mRNA-processing-spl 21.1 37 0.0013 27.4 1.5 15 37-51 36-50 (222)
62 3dwl_C Actin-related protein 2 21.0 3.5E+02 0.012 22.2 13.5 99 130-245 122-239 (377)
63 3mmy_A MRNA export factor; mRN 20.7 3.4E+02 0.012 21.9 19.1 31 211-247 279-309 (368)
No 1
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.84 E-value=1.1e-06 Score=76.36 Aligned_cols=222 Identities=8% Similarity=-0.055 Sum_probs=126.6
Q ss_pred ceeeecCCCCCcCCeEEEeecCeEeeeeeeccccCcceEEEEcCcCcc---ceecCCCccCCCcceeccCcccccceeee
Q 041236 2 KARNLNFPLGKVLHQLIGCCNGLLCIVVQIHEHAGEADLVLWNPWTGR---YKTVPISVVGLTLDMYGFGYINTFGFCFD 78 (281)
Q Consensus 2 ~~~~~~~p~~~~~~~i~~scnGLlcl~~~~~~~~~~~~~~V~NP~Tr~---~~~LP~~~~~~~~~~~g~g~~~~~~l~~d 78 (281)
+|..++-...++...-....+|-|.+.....+......++++||.|++ |..+|+.+..... ++.. +++
T Consensus 42 ~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~--~~~~-------~~~ 112 (301)
T 2vpj_A 42 EWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGL--AGAT-------TLG 112 (301)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBS--CEEE-------EET
T ss_pred eEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccc--eeEE-------EEC
Confidence 355555222233333444567766665533222234689999999999 9999765543211 1111 011
Q ss_pred CCCCceEEEEEEeCC---CCcEEEEEEcCCCCccc------------cccccce-EEeeeccCCcCceEEEEEECCCCeE
Q 041236 79 QSTNDYKIVRLVNDD---GITHFQIYSLNTNFWKT------------GILPDRI-HDTKERFRTIFSSVILCFSLVDDKF 142 (281)
Q Consensus 79 ~~~~~yKVv~~~~~~---~~~~~eVys~~~~~Wr~------------~v~~nG~-yWl~~~~~~~~~~~IlsFD~~~e~f 142 (281)
=|++.+.-.+ ....+++|+..+++|+. .+.++|. |-+...........+..||+.+.+|
T Consensus 113 -----~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 187 (301)
T 2vpj_A 113 -----DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHW 187 (301)
T ss_dssp -----TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred -----CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcE
Confidence 1333332211 13578999999999986 4566888 7765432211245799999999999
Q ss_pred EEE-eCCCCcCCCCeeEEEEeCCeEEEEEecCCCCCeEEEEEEcC--CceeeEEEecCCCCcCccceeeeEEEEecCCcE
Q 041236 143 RVI-LLPDDVAKGAEFDLFDFGGCLGLIHCHARRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEV 219 (281)
Q Consensus 143 ~~i-~lP~~~~~~~~~~L~~~~g~L~~~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i 219 (281)
..+ ++|... .......++++|.+..-.......-+||+++- ..|+++-.++... ..+. .++ .+++|
T Consensus 188 ~~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r------~~~~-~~~-~~~~i 256 (301)
T 2vpj_A 188 TNVTPMATKR---SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR------CYVG-ATV-LRGRL 256 (301)
T ss_dssp EEECCCSSCC---BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCC------BSCE-EEE-ETTEE
T ss_pred EeCCCCCccc---ccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcc------ccee-EEE-ECCEE
Confidence 998 344332 23466778999988322110122345666654 8899875433222 2222 222 35677
Q ss_pred EEEecCCCCCCCCcEEEEEECCCCeEEEEE
Q 041236 220 LLHENDTYPSHGKDVFYLYSLEKKIFRKFK 249 (281)
Q Consensus 220 ll~~~~~~~~~~~~~l~~Yd~~t~~~~~i~ 249 (281)
++.-...-..... .+..||+++++|+.+.
T Consensus 257 ~v~GG~~~~~~~~-~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 257 YAIAGYDGNSLLS-SIECYDPIIDSWEVVT 285 (301)
T ss_dssp EEECCBCSSSBEE-EEEEEETTTTEEEEEE
T ss_pred EEEcCcCCCcccc-cEEEEcCCCCeEEEcC
Confidence 6664110000013 4899999999999983
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.81 E-value=1.3e-06 Score=76.04 Aligned_cols=221 Identities=8% Similarity=-0.014 Sum_probs=128.4
Q ss_pred ceeeecCCCCCcCCeEEEeecCeEeeeeeeccccCcceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCCC
Q 041236 2 KARNLNFPLGKVLHQLIGCCNGLLCIVVQIHEHAGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQST 81 (281)
Q Consensus 2 ~~~~~~~p~~~~~~~i~~scnGLlcl~~~~~~~~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~ 81 (281)
+|..++-+..++...-....+|.|.+..... ......+.++||.|++|..+|+.+..... ++.. +++
T Consensus 35 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~-------~~~--- 101 (306)
T 3ii7_A 35 SWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGPPTPRDS--LAAC-------AAE--- 101 (306)
T ss_dssp EEEECCCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECCSSCCBS--CEEE-------EET---
T ss_pred CEecCCCCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCCCccccc--eeEE-------EEC---
Confidence 4666654333344444445688777665322 11346899999999999999765532211 1110 011
Q ss_pred CceEEEEEEeCC----CCcEEEEEEcCCCCccc------------cccccce-EEeeeccCCcC----ceEEEEEECCCC
Q 041236 82 NDYKIVRLVNDD----GITHFQIYSLNTNFWKT------------GILPDRI-HDTKERFRTIF----SSVILCFSLVDD 140 (281)
Q Consensus 82 ~~yKVv~~~~~~----~~~~~eVys~~~~~Wr~------------~v~~nG~-yWl~~~~~~~~----~~~IlsFD~~~e 140 (281)
=||+.+.-.+ ....+++|+..+++|+. .+.++|. |-+........ ...+..||++++
T Consensus 102 --~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 102 --GKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp --TEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred --CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 1333332211 24578999999999977 4567888 77664322111 466999999999
Q ss_pred eEEEEe-CCCCcCCCCeeEEEEeCCeEEEE-EecCCCCCeEEEEEEcC--CceeeEEEecCCCCcCccceeeeEEEEecC
Q 041236 141 KFRVIL-LPDDVAKGAEFDLFDFGGCLGLI-HCHARRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSLYLAPVFFYSGA 216 (281)
Q Consensus 141 ~f~~i~-lP~~~~~~~~~~L~~~~g~L~~~-~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~ 216 (281)
+|..++ +|... .......++|+|.+. .... ....-+||+++- ..|+++-.++... .... .++ .+
T Consensus 180 ~W~~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r------~~~~-~~~-~~ 247 (306)
T 3ii7_A 180 TWTELCPMIEAR---KNHGLVFVKDKIFAVGGQNG-LGGLDNVEYYDIKLNEWKMVSPMPWKG------VTVK-CAA-VG 247 (306)
T ss_dssp EEEEECCCSSCC---BSCEEEEETTEEEEECCEET-TEEBCCEEEEETTTTEEEECCCCSCCB------SCCE-EEE-ET
T ss_pred eEEECCCccchh---hcceEEEECCEEEEEeCCCC-CCCCceEEEeeCCCCcEEECCCCCCCc------ccee-EEE-EC
Confidence 999984 44332 234667779999882 2211 122335777765 7899864333221 1222 222 25
Q ss_pred CcEEEEecCCCCCCCCcEEEEEECCCCeEEEEEE
Q 041236 217 GEVLLHENDTYPSHGKDVFYLYSLEKKIFRKFKI 250 (281)
Q Consensus 217 g~ill~~~~~~~~~~~~~l~~Yd~~t~~~~~i~~ 250 (281)
++|++.-...-...... +..||+++++|+.+..
T Consensus 248 ~~i~v~GG~~~~~~~~~-~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 248 SIVYVLAGFQGVGRLGH-ILEYNTETDKWVANSK 280 (306)
T ss_dssp TEEEEEECBCSSSBCCE-EEEEETTTTEEEEEEE
T ss_pred CEEEEEeCcCCCeeeee-EEEEcCCCCeEEeCCC
Confidence 67766641100001234 9999999999999844
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.73 E-value=1.5e-06 Score=76.09 Aligned_cols=223 Identities=11% Similarity=0.054 Sum_probs=125.8
Q ss_pred ceeeecCCCCCcCCeEEEeecCeEeeeeee----ccccCcceEEEEcCcCccceecCCCccCCCcceeccCcccccceee
Q 041236 2 KARNLNFPLGKVLHQLIGCCNGLLCIVVQI----HEHAGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCF 77 (281)
Q Consensus 2 ~~~~~~~p~~~~~~~i~~scnGLlcl~~~~----~~~~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~ 77 (281)
+|..++-...++...-+...+|.|.+.... .+......+.++||.|++|..+|+.+..... ++.. ++
T Consensus 50 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~-------~~ 120 (308)
T 1zgk_A 50 TWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNR--IGVG-------VI 120 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBT--CEEE-------EE
T ss_pred eEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccc--cEEE-------EE
Confidence 355553222233333334567877766543 1111245799999999999999765543211 1111 01
Q ss_pred eCCCCceEEEEEEe--CC-CCcEEEEEEcCCCCccc------------cccccce-EEeeeccCCcCceEEEEEECCCCe
Q 041236 78 DQSTNDYKIVRLVN--DD-GITHFQIYSLNTNFWKT------------GILPDRI-HDTKERFRTIFSSVILCFSLVDDK 141 (281)
Q Consensus 78 d~~~~~yKVv~~~~--~~-~~~~~eVys~~~~~Wr~------------~v~~nG~-yWl~~~~~~~~~~~IlsFD~~~e~ 141 (281)
+ + ||+.+.- .. ....+++|+..+++|+. .+.++|. |-+...........+..||+.+++
T Consensus 121 ~---~--~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 121 D---G--HIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp T---T--EEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred C---C--EEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 1 1 2333311 11 13468999999999987 4566777 766543221124579999999999
Q ss_pred EEEEe-CCCCcCCCCeeEEEEeCCeEEEEEecCCCCCeEEEEEEcC--CceeeEEEecCCCCcCccceeeeEEEEecCCc
Q 041236 142 FRVIL-LPDDVAKGAEFDLFDFGGCLGLIHCHARRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGE 218 (281)
Q Consensus 142 f~~i~-lP~~~~~~~~~~L~~~~g~L~~~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ 218 (281)
|..++ +|... .......++++|.+..-.......-++|+++- ..|+++-.++... .... ..+ .+++
T Consensus 196 W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r------~~~~-~~~-~~~~ 264 (308)
T 1zgk_A 196 WRMITAMNTIR---SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR------SALG-ITV-HQGR 264 (308)
T ss_dssp EEECCCCSSCC---BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC------BSCE-EEE-ETTE
T ss_pred EeeCCCCCCcc---ccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc------cceE-EEE-ECCE
Confidence 99883 44322 23456777999988322111123456777764 8899865333221 1222 222 3567
Q ss_pred EEEEecCCCCCCCCcEEEEEECCCCeEEEEEE
Q 041236 219 VLLHENDTYPSHGKDVFYLYSLEKKIFRKFKI 250 (281)
Q Consensus 219 ill~~~~~~~~~~~~~l~~Yd~~t~~~~~i~~ 250 (281)
|++.-...-...... +..||+++++|+.+..
T Consensus 265 i~v~GG~~~~~~~~~-v~~yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 265 IYVLGGYDGHTFLDS-VECYDPDTDTWSEVTR 295 (308)
T ss_dssp EEEECCBCSSCBCCE-EEEEETTTTEEEEEEE
T ss_pred EEEEcCcCCCcccce-EEEEcCCCCEEeecCC
Confidence 766631100001234 9999999999999843
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.71 E-value=4.3e-06 Score=72.63 Aligned_cols=206 Identities=10% Similarity=0.090 Sum_probs=120.3
Q ss_pred EEeecCeEeeeeeeccccCcceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCCCCceEEEEEEeCC---C
Q 041236 18 IGCCNGLLCIVVQIHEHAGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLVNDD---G 94 (281)
Q Consensus 18 ~~scnGLlcl~~~~~~~~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~~~~---~ 94 (281)
+...+|-|.+.....+......+.++||.|++|..+|+.+..... ++.. +++ + +++.+.-.+ .
T Consensus 57 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~-------~~~---~--~iyv~GG~~~~~~ 122 (302)
T 2xn4_A 57 MVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST--LGAA-------VLN---G--LLYAVGGFDGSTG 122 (302)
T ss_dssp EEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS--CEEE-------EET---T--EEEEEEEECSSCE
T ss_pred EEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc--eEEE-------EEC---C--EEEEEcCCCCCcc
Confidence 345578777665432222346799999999999999865543211 1111 011 1 333332211 1
Q ss_pred CcEEEEEEcCCCCccc------------cccccce-EEeeeccCCc--CceEEEEEECCCCeEEEE-eCCCCcCCCCeeE
Q 041236 95 ITHFQIYSLNTNFWKT------------GILPDRI-HDTKERFRTI--FSSVILCFSLVDDKFRVI-LLPDDVAKGAEFD 158 (281)
Q Consensus 95 ~~~~eVys~~~~~Wr~------------~v~~nG~-yWl~~~~~~~--~~~~IlsFD~~~e~f~~i-~lP~~~~~~~~~~ 158 (281)
...+++|+..+++|+. .+.++|. |-+....... ....+..||+.+++|..+ ++|... ....
T Consensus 123 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~ 199 (302)
T 2xn4_A 123 LSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR---SGAG 199 (302)
T ss_dssp EEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC---BSCE
T ss_pred CceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc---cccc
Confidence 3468999999999987 4567888 7665432111 135699999999999998 444332 2346
Q ss_pred EEEeCCeEEEEEecCCCCCeEEEEEEcC--CceeeEEEecCCCCcCccceeeeEEEEecCCcEEEEecCCCCCCCCcEEE
Q 041236 159 LFDFGGCLGLIHCHARRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYPSHGKDVFY 236 (281)
Q Consensus 159 L~~~~g~L~~~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~~~~l~ 236 (281)
+..++|+|.+..-.......-++|+++- ..|+++-.++... ..+. .+. .+++|++.-.......... +.
T Consensus 200 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r------~~~~-~~~-~~~~i~v~GG~~~~~~~~~-v~ 270 (302)
T 2xn4_A 200 VGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR------RNAG-VCA-VNGLLYVVGGDDGSCNLAS-VE 270 (302)
T ss_dssp EEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC------BSCE-EEE-ETTEEEEECCBCSSSBCCC-EE
T ss_pred EEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc------ccCe-EEE-ECCEEEEECCcCCCccccc-EE
Confidence 6778999988322111122335777765 7899875433221 1222 222 3667776642100001234 99
Q ss_pred EEECCCCeEEEEE
Q 041236 237 LYSLEKKIFRKFK 249 (281)
Q Consensus 237 ~Yd~~t~~~~~i~ 249 (281)
.||+++++|+.+.
T Consensus 271 ~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 271 YYNPTTDKWTVVS 283 (302)
T ss_dssp EEETTTTEEEECS
T ss_pred EEcCCCCeEEECC
Confidence 9999999999983
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.62 E-value=7.1e-06 Score=71.83 Aligned_cols=219 Identities=9% Similarity=0.054 Sum_probs=124.6
Q ss_pred eeeecCCCC-CcCCeEEEeecCeEeeeeeec----cc--cCcceEEEEcCcCccceecCCCccCCCcceeccCcccccce
Q 041236 3 ARNLNFPLG-KVLHQLIGCCNGLLCIVVQIH----EH--AGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGF 75 (281)
Q Consensus 3 ~~~~~~p~~-~~~~~i~~scnGLlcl~~~~~----~~--~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l 75 (281)
|...+.|.. ++...-....+|.|.+..... .. .....++++||.|++|..+|+.+.... .++..
T Consensus 25 W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~--~~~~~------- 95 (315)
T 4asc_A 25 CYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRC--LFGLG------- 95 (315)
T ss_dssp EEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEE--SCEEE-------
T ss_pred EecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchh--ceeEE-------
Confidence 444444331 233344445677666655421 10 012358999999999999976553211 11111
Q ss_pred eeeCCCCceEEEEEEe----C-C-CCcEEEEEEcCCCCccc------------cccccce-EEeeec-cCCcCceEEEEE
Q 041236 76 CFDQSTNDYKIVRLVN----D-D-GITHFQIYSLNTNFWKT------------GILPDRI-HDTKER-FRTIFSSVILCF 135 (281)
Q Consensus 76 ~~d~~~~~yKVv~~~~----~-~-~~~~~eVys~~~~~Wr~------------~v~~nG~-yWl~~~-~~~~~~~~IlsF 135 (281)
+++ + +|..+.- . . ....+++|+..+++|+. .+.++|. |-+... ........+..|
T Consensus 96 ~~~---~--~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y 170 (315)
T 4asc_A 96 EAL---N--SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVY 170 (315)
T ss_dssp EET---T--EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEE
T ss_pred EEC---C--EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEE
Confidence 011 1 3333321 0 1 14568999999999987 4567888 776654 211234679999
Q ss_pred ECCCCeEEEE-eCCCCcCCCCeeEEEEeCCeEEE-EEecCCCCCeEEEEEEcC--CceeeEEEecCCCCcCccceeeeEE
Q 041236 136 SLVDDKFRVI-LLPDDVAKGAEFDLFDFGGCLGL-IHCHARRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSLYLAPVF 211 (281)
Q Consensus 136 D~~~e~f~~i-~lP~~~~~~~~~~L~~~~g~L~~-~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~~~~~~~ 211 (281)
|+.+++|..+ ++|... .......++|+|.+ ..... ....-++|+++- ..|+++-.++... ..+. .
T Consensus 171 d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r------~~~~-~ 239 (315)
T 4asc_A 171 DPKKFEWKELAPMQTAR---SLFGATVHDGRIIVAAGVTD-TGLTSSAEVYSITDNKWAPFEAFPQER------SSLS-L 239 (315)
T ss_dssp ETTTTEEEECCCCSSCC---BSCEEEEETTEEEEEEEECS-SSEEEEEEEEETTTTEEEEECCCSSCC------BSCE-E
T ss_pred eCCCCeEEECCCCCCch---hceEEEEECCEEEEEeccCC-CCccceEEEEECCCCeEEECCCCCCcc------ccee-E
Confidence 9999999988 344332 23456778999988 33321 223447888865 8899875433221 2222 2
Q ss_pred EEecCCcEEEEecCCC----C-----CCCCcEEEEEECCCCeEEEE
Q 041236 212 FYSGAGEVLLHENDTY----P-----SHGKDVFYLYSLEKKIFRKF 248 (281)
Q Consensus 212 ~~~~~g~ill~~~~~~----~-----~~~~~~l~~Yd~~t~~~~~i 248 (281)
+. -+++|++.-...- . ..... +..||+++++|+.+
T Consensus 240 ~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~-v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 240 VS-LVGTLYAIGGFATLETESGELVPTELND-IWRYNEEEKKWEGV 283 (315)
T ss_dssp EE-ETTEEEEEEEEEEEECTTSCEEEEEEEE-EEEEETTTTEEEEE
T ss_pred EE-ECCEEEEECCccccCcCCccccccccCc-EEEecCCCChhhhh
Confidence 22 3556655531000 0 01133 88999999999999
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.58 E-value=1.6e-05 Score=69.68 Aligned_cols=219 Identities=11% Similarity=0.113 Sum_probs=124.8
Q ss_pred eeeecCCC-CCcCCeEEEeecCeEeeeeeec-cc-----cCcceEEEEcCcCccceecCCCccCCCcceeccCcccccce
Q 041236 3 ARNLNFPL-GKVLHQLIGCCNGLLCIVVQIH-EH-----AGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGF 75 (281)
Q Consensus 3 ~~~~~~p~-~~~~~~i~~scnGLlcl~~~~~-~~-----~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l 75 (281)
|...+.|. .++...-+...+|.|.+..... +. .....++++||.|++|..+|+.+.... .++..
T Consensus 36 W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~--~~~~~------- 106 (318)
T 2woz_A 36 CYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARC--LFGLG------- 106 (318)
T ss_dssp EEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBC--SCEEE-------
T ss_pred eecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccc--ccceE-------
Confidence 44444443 2333444455677666654311 00 011248999999999999976554321 11111
Q ss_pred eeeCCCCceEEEEEEeC---C--CCcEEEEEEcCCCCccc------------cccccce-EEeeeccCC-cCceEEEEEE
Q 041236 76 CFDQSTNDYKIVRLVND---D--GITHFQIYSLNTNFWKT------------GILPDRI-HDTKERFRT-IFSSVILCFS 136 (281)
Q Consensus 76 ~~d~~~~~yKVv~~~~~---~--~~~~~eVys~~~~~Wr~------------~v~~nG~-yWl~~~~~~-~~~~~IlsFD 136 (281)
+++ + ||..+.-. . ....+++|+..+++|+. .+.++|. |-+...... .....+..||
T Consensus 107 ~~~---~--~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 181 (318)
T 2woz_A 107 EVD---D--KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYN 181 (318)
T ss_dssp EET---T--EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEE
T ss_pred EEC---C--EEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEc
Confidence 011 1 33333221 1 13468999999999986 4567888 776543211 1235699999
Q ss_pred CCCCeEEEEe-CCCCcCCCCeeEEEEeCCeEEE-EEecCCCCCeEEEEEEcC--CceeeEEEecCCCCcCccceeeeEEE
Q 041236 137 LVDDKFRVIL-LPDDVAKGAEFDLFDFGGCLGL-IHCHARRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSLYLAPVFF 212 (281)
Q Consensus 137 ~~~e~f~~i~-lP~~~~~~~~~~L~~~~g~L~~-~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ 212 (281)
+.+++|..++ +|... .......++|+|.+ ..... ....-++|+++- ..|+++-.++... ..+. +.
T Consensus 182 ~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r------~~~~-~~ 250 (318)
T 2woz_A 182 PKKGDWKDLAPMKTPR---SMFGVAIHKGKIVIAGGVTE-DGLSASVEAFDLKTNKWEVMTEFPQER------SSIS-LV 250 (318)
T ss_dssp TTTTEEEEECCCSSCC---BSCEEEEETTEEEEEEEEET-TEEEEEEEEEETTTCCEEECCCCSSCC------BSCE-EE
T ss_pred CCCCEEEECCCCCCCc---ccceEEEECCEEEEEcCcCC-CCccceEEEEECCCCeEEECCCCCCcc------cceE-EE
Confidence 9999999984 44332 23456778999998 33221 123457777765 8899865433321 2222 22
Q ss_pred EecCCcEEEEecCCC---------CCCCCcEEEEEECCCCeEEEE
Q 041236 213 YSGAGEVLLHENDTY---------PSHGKDVFYLYSLEKKIFRKF 248 (281)
Q Consensus 213 ~~~~g~ill~~~~~~---------~~~~~~~l~~Yd~~t~~~~~i 248 (281)
+ .+++|++.-.... ...... +..||+++++|+++
T Consensus 251 ~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~-v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 251 S-LAGSLYAIGGFAMIQLESKEFAPTEVND-IWKYEDDKKEWAGM 293 (318)
T ss_dssp E-ETTEEEEECCBCCBC----CCBCCBCCC-EEEEETTTTEEEEE
T ss_pred E-ECCEEEEECCeeccCCCCceeccceeee-EEEEeCCCCEehhh
Confidence 2 3556766531100 001244 99999999999999
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.41 E-value=8.1e-05 Score=64.36 Aligned_cols=226 Identities=8% Similarity=0.017 Sum_probs=125.5
Q ss_pred ecCeEeeeee-eccccCcceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCCCCceEEEEEEeCC---CCc
Q 041236 21 CNGLLCIVVQ-IHEHAGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLVNDD---GIT 96 (281)
Q Consensus 21 cnGLlcl~~~-~~~~~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~~~~---~~~ 96 (281)
.+|-|.+... .........++++||.|++|..+|+.+..... ++.. +.+ + +|+.+.-.+ ...
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~-------~~~---~--~l~v~GG~~~~~~~~ 78 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRY--VASV-------SLH---D--RIYVIGGYDGRSRLS 78 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBS--CEEE-------EET---T--EEEEECCBCSSCBCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhcc--ccEE-------EEC---C--EEEEEcCCCCCccCc
Confidence 4555555443 22111346899999999999999854432111 1110 011 1 333332211 134
Q ss_pred EEEEEEcCCCC---ccc------------cccccce-EEeeeccCCcCceEEEEEECCCCeEEEE-eCCCCcCCCCeeEE
Q 041236 97 HFQIYSLNTNF---WKT------------GILPDRI-HDTKERFRTIFSSVILCFSLVDDKFRVI-LLPDDVAKGAEFDL 159 (281)
Q Consensus 97 ~~eVys~~~~~---Wr~------------~v~~nG~-yWl~~~~~~~~~~~IlsFD~~~e~f~~i-~lP~~~~~~~~~~L 159 (281)
.+++|+..+++ |+. .+.++|. |-+...........+..||+.+.+|..+ ++|... .....
T Consensus 79 ~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~ 155 (301)
T 2vpj_A 79 SVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR---EGAGL 155 (301)
T ss_dssp CEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC---BSCEE
T ss_pred eEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc---ccceE
Confidence 68999999999 977 4566888 7765433221245799999999999988 455333 23456
Q ss_pred EEeCCeEEEEEecCCCCCeEEEEEEcC--CceeeEEEecCCCCcCccceeeeEEEEecCCcEEEEecCCCCCCCCcEEEE
Q 041236 160 FDFGGCLGLIHCHARRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYPSHGKDVFYL 237 (281)
Q Consensus 160 ~~~~g~L~~~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~~~~l~~ 237 (281)
..++|+|.+..-.......-++|+++- ..|+++-.++... ..+. ... .+++|++.-...-...... +..
T Consensus 156 ~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r------~~~~-~~~-~~~~i~v~GG~~~~~~~~~-v~~ 226 (301)
T 2vpj_A 156 VVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKR------SGAG-VAL-LNDHIYVVGGFDGTAHLSS-VEA 226 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCC------BSCE-EEE-ETTEEEEECCBCSSSBCCC-EEE
T ss_pred EEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccc------ccce-EEE-ECCEEEEEeCCCCCcccce-EEE
Confidence 677999988322111123345677764 8899874332221 2222 222 3566766641100001244 999
Q ss_pred EECCCCeEEEEEEecCCCCCceEEEEeecCcccCCC
Q 041236 238 YSLEKKIFRKFKIEGMEQFPFHIHMAYTPSLTLLTR 273 (281)
Q Consensus 238 Yd~~t~~~~~i~~~~~~~~~~~~~~~Y~eSLv~~~~ 273 (281)
||+++++|+.+........ .+.+..+-..|.-+.+
T Consensus 227 yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~i~v~GG 261 (301)
T 2vpj_A 227 YNIRTDSWTTVTSMTTPRC-YVGATVLRGRLYAIAG 261 (301)
T ss_dssp EETTTTEEEEECCCSSCCB-SCEEEEETTEEEEECC
T ss_pred EeCCCCcEEECCCCCCccc-ceeEEEECCEEEEEcC
Confidence 9999999999843211110 3344445555555544
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.15 E-value=0.00018 Score=62.36 Aligned_cols=180 Identities=8% Similarity=0.014 Sum_probs=107.8
Q ss_pred ceeeecCCCCCcCCeEEEeecCeEeeeeeec-cccCcceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCC
Q 041236 2 KARNLNFPLGKVLHQLIGCCNGLLCIVVQIH-EHAGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQS 80 (281)
Q Consensus 2 ~~~~~~~p~~~~~~~i~~scnGLlcl~~~~~-~~~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~ 80 (281)
+|..++-...++...-....+|-|.+..... +......+.++||.|++|..+|+.+..... ++.. +++
T Consensus 81 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~-------~~~-- 149 (306)
T 3ii7_A 81 SWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCS--HGMV-------EAN-- 149 (306)
T ss_dssp EEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBS--CEEE-------EET--
T ss_pred eEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcce--eEEE-------EEC--
Confidence 3555543333344444556688777665432 222346899999999999999765543211 1110 011
Q ss_pred CCceEEEEEEe--CC-C----CcEEEEEEcCCCCccc------------cccccce-EEeeeccCCcCceEEEEEECCCC
Q 041236 81 TNDYKIVRLVN--DD-G----ITHFQIYSLNTNFWKT------------GILPDRI-HDTKERFRTIFSSVILCFSLVDD 140 (281)
Q Consensus 81 ~~~yKVv~~~~--~~-~----~~~~eVys~~~~~Wr~------------~v~~nG~-yWl~~~~~~~~~~~IlsFD~~~e 140 (281)
+ |+..+.- .. . ...+++|+..+++|+. .+.++|. |-+...........+..||++++
T Consensus 150 -~--~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 150 -G--LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp -T--EEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred -C--EEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 1 3333321 11 1 4568999999999977 4566777 76654222112356999999999
Q ss_pred eEEEE-eCCCCcCCCCeeEEEEeCCeEEEEEecCCCCCeEEEEEEcC--CceeeEEEecCC
Q 041236 141 KFRVI-LLPDDVAKGAEFDLFDFGGCLGLIHCHARRRAHVDIWTRNE--LNWIKIMCIPRL 198 (281)
Q Consensus 141 ~f~~i-~lP~~~~~~~~~~L~~~~g~L~~~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~ 198 (281)
+|..+ ++|... .......++|+|.+..-.......-+||+++- ..|+.+-.++..
T Consensus 227 ~W~~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~ 284 (306)
T 3ii7_A 227 EWKMVSPMPWKG---VTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAF 284 (306)
T ss_dssp EEEECCCCSCCB---SCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECC
T ss_pred cEEECCCCCCCc---cceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccc
Confidence 99988 455432 23566778999988332111223347888875 889998766543
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.13 E-value=0.00023 Score=61.96 Aligned_cols=180 Identities=7% Similarity=0.016 Sum_probs=106.5
Q ss_pred ceeeecCCCCCcCCeEEEeecCeEeeeeeeccccCcceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCCC
Q 041236 2 KARNLNFPLGKVLHQLIGCCNGLLCIVVQIHEHAGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQST 81 (281)
Q Consensus 2 ~~~~~~~p~~~~~~~i~~scnGLlcl~~~~~~~~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~ 81 (281)
.|..++-...++...-....+|-|.+.....+......+.++||.|.+|..+|+.+..... ++.. +++
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~-------~~~--- 168 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIG--VGVA-------VLN--- 168 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBS--CEEE-------EET---
T ss_pred eEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccc--eEEE-------EEC---
Confidence 3555543223334444455688777665332221246799999999999999765432211 1110 011
Q ss_pred CceEEEEEEeCC---CCcEEEEEEcCCCCccc------------cccccce-EEeeeccCCcCceEEEEEECCCCeEEEE
Q 041236 82 NDYKIVRLVNDD---GITHFQIYSLNTNFWKT------------GILPDRI-HDTKERFRTIFSSVILCFSLVDDKFRVI 145 (281)
Q Consensus 82 ~~yKVv~~~~~~---~~~~~eVys~~~~~Wr~------------~v~~nG~-yWl~~~~~~~~~~~IlsFD~~~e~f~~i 145 (281)
=|++.+.-.+ ....+++|+..+++|+. .+.++|. |-+...........+..||+++++|..+
T Consensus 169 --~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 246 (308)
T 1zgk_A 169 --RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFV 246 (308)
T ss_dssp --TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred --CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEEC
Confidence 1333332211 13568999999999976 4566777 7765432211246799999999999988
Q ss_pred e-CCCCcCCCCeeEEEEeCCeEEEEEecCCCCCeEEEEEEcC--CceeeEEEecCC
Q 041236 146 L-LPDDVAKGAEFDLFDFGGCLGLIHCHARRRAHVDIWTRNE--LNWIKIMCIPRL 198 (281)
Q Consensus 146 ~-lP~~~~~~~~~~L~~~~g~L~~~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~ 198 (281)
+ +|... ....+..++|+|.+..-.......-+||+++- ..|+++-.++..
T Consensus 247 ~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 299 (308)
T 1zgk_A 247 APMKHRR---SALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSG 299 (308)
T ss_dssp CCCSSCC---BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC
T ss_pred CCCCCCc---cceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCC
Confidence 4 44322 23456778999988322111233447788765 889998665544
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.02 E-value=0.00027 Score=61.11 Aligned_cols=174 Identities=11% Similarity=0.089 Sum_probs=102.1
Q ss_pred ceeeecCCCCCcCCeEEEeecCeEeeeeeeccccCcceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCCC
Q 041236 2 KARNLNFPLGKVLHQLIGCCNGLLCIVVQIHEHAGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQST 81 (281)
Q Consensus 2 ~~~~~~~p~~~~~~~i~~scnGLlcl~~~~~~~~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~ 81 (281)
+|..++-...++...-....+|-|.+.....+......+.++||.|.+|..+|+.+..... ++.. +++.
T Consensus 88 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~-------~~~~-- 156 (302)
T 2xn4_A 88 QWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSS--VGVG-------VVGG-- 156 (302)
T ss_dssp EEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBS--CEEE-------EETT--
T ss_pred ceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccC--ceEE-------EECC--
Confidence 4566653333334444455788777765433221235789999999999999765543211 1111 0111
Q ss_pred CceEEEEEEe--CCC---CcEEEEEEcCCCCccc------------cccccce-EEeeeccCCcCceEEEEEECCCCeEE
Q 041236 82 NDYKIVRLVN--DDG---ITHFQIYSLNTNFWKT------------GILPDRI-HDTKERFRTIFSSVILCFSLVDDKFR 143 (281)
Q Consensus 82 ~~yKVv~~~~--~~~---~~~~eVys~~~~~Wr~------------~v~~nG~-yWl~~~~~~~~~~~IlsFD~~~e~f~ 143 (281)
|+..+.- ..+ ...+++|+..+++|+. .+.++|. |-+...........+..||+++.+|.
T Consensus 157 ---~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 157 ---LLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp ---EEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEE
T ss_pred ---EEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEe
Confidence 3333311 111 3468999999999986 4566888 77654322212356999999999999
Q ss_pred EEe-CCCCcCCCCeeEEEEeCCeEEEEEecCCCCCeEEEEEEcC--CceeeE
Q 041236 144 VIL-LPDDVAKGAEFDLFDFGGCLGLIHCHARRRAHVDIWTRNE--LNWIKI 192 (281)
Q Consensus 144 ~i~-lP~~~~~~~~~~L~~~~g~L~~~~~~~~~~~~i~IWvL~~--~~W~~~ 192 (281)
.++ +|... ....+..++|+|.+..-.......-+||+++- ..|+.+
T Consensus 234 ~~~~~~~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 282 (302)
T 2xn4_A 234 QVADMNMCR---RNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVV 282 (302)
T ss_dssp EECCCSSCC---BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred eCCCCCCcc---ccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEEC
Confidence 984 44332 23456778999988322111122345666654 889875
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.00 E-value=0.00043 Score=61.30 Aligned_cols=230 Identities=10% Similarity=0.066 Sum_probs=121.8
Q ss_pred CeEEEeecCeEeeeeeeccccCcceEEEEcCcC--ccceecCCCc-cCCCcceeccCcccccceeeeCCCCceEEEEEEe
Q 041236 15 HQLIGCCNGLLCIVVQIHEHAGEADLVLWNPWT--GRYKTVPISV-VGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLVN 91 (281)
Q Consensus 15 ~~i~~scnGLlcl~~~~~~~~~~~~~~V~NP~T--r~~~~LP~~~-~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~~ 91 (281)
.......+|-|.+.... ....++++||.+ ++|..+|+.+ ..... ++.. +++ + ||..+.-
T Consensus 12 ~~~~~~~~~~iyv~GG~----~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~--~~~~-------~~~---~--~lyv~GG 73 (357)
T 2uvk_A 12 SGTGAIDNDTVYIGLGS----AGTAWYKLDTQAKDKKWTALAAFPGGPRDQ--ATSA-------FID---G--NLYVFGG 73 (357)
T ss_dssp SCEEEEETTEEEEECGG----GTTCEEEEETTSSSCCEEECCCCTTCCCBS--CEEE-------EET---T--EEEEECC
T ss_pred ceEEEEECCEEEEEeCc----CCCeEEEEccccCCCCeeECCCCCCCcCcc--ceEE-------EEC---C--EEEEEcC
Confidence 34445558877776531 345899999984 8999997644 22111 1100 011 1 2222211
Q ss_pred C----C----CCcEEEEEEcCCCCccc-------------cccccce-EEeeeccCCc----------------------
Q 041236 92 D----D----GITHFQIYSLNTNFWKT-------------GILPDRI-HDTKERFRTI---------------------- 127 (281)
Q Consensus 92 ~----~----~~~~~eVys~~~~~Wr~-------------~v~~nG~-yWl~~~~~~~---------------------- 127 (281)
. + ....+++|+..+++|+. .+.++|. |-+.......
T Consensus 74 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
T 2uvk_A 74 IGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKIN 153 (357)
T ss_dssp EEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhh
Confidence 0 1 13468999999999976 2456777 7665422100
Q ss_pred ------------CceEEEEEECCCCeEEEE-eCCCCcCCCCeeEEEEeCCeEEEE--EecCCCCCeEEEEEEc---C-Cc
Q 041236 128 ------------FSSVILCFSLVDDKFRVI-LLPDDVAKGAEFDLFDFGGCLGLI--HCHARRRAHVDIWTRN---E-LN 188 (281)
Q Consensus 128 ------------~~~~IlsFD~~~e~f~~i-~lP~~~~~~~~~~L~~~~g~L~~~--~~~~~~~~~i~IWvL~---~-~~ 188 (281)
....+..||+.+.+|..+ ++|.... ....+..++++|.+. .... ....-++|.++ + ..
T Consensus 154 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~--~~~~~~~~~~~iyv~GG~~~~-~~~~~~v~~~d~d~~~~~ 230 (357)
T 2uvk_A 154 AHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGT--AGAAVVNKGDKTWLINGEAKP-GLRTDAVFELDFTGNNLK 230 (357)
T ss_dssp HHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCC--BSCEEEEETTEEEEECCEEET-TEECCCEEEEECC---CE
T ss_pred hhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCc--ccccEEEECCEEEEEeeecCC-CcccCceEEEEecCCCCc
Confidence 125799999999999988 4553321 124677789999882 2211 12244567664 3 78
Q ss_pred eeeEEEecCCCCcCccceeeeEEEEecCCcEEEEecCCCC-----------------CCCCcEEEEEECCCCeEEEEEEe
Q 041236 189 WIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYP-----------------SHGKDVFYLYSLEKKIFRKFKIE 251 (281)
Q Consensus 189 W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~-----------------~~~~~~l~~Yd~~t~~~~~i~~~ 251 (281)
|+++-.++.... ...+. . +..+++|++.-..... ..... +..||+++++|+.+...
T Consensus 231 W~~~~~~~~~~~----~~~~~-~-~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~yd~~~~~W~~~~~~ 303 (357)
T 2uvk_A 231 WNKLAPVSSPDG----VAGGF-A-GISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYS-TDIHLWHNGKWDKSGEL 303 (357)
T ss_dssp EEECCCSSTTTC----CBSCE-E-EEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEEC-CEEEECC---CEEEEEC
T ss_pred EEecCCCCCCcc----cccce-E-EEECCEEEEEcCccccCCcccccccceeccccccceee-EEEEecCCCceeeCCCC
Confidence 998654432211 11222 2 2345567665410000 00023 78999999999998433
Q ss_pred cCCCCCceEEEEeecCcccCCC
Q 041236 252 GMEQFPFHIHMAYTPSLTLLTR 273 (281)
Q Consensus 252 ~~~~~~~~~~~~Y~eSLv~~~~ 273 (281)
..+.. .+.+..+-..|+-+++
T Consensus 304 p~~r~-~~~~~~~~~~i~v~GG 324 (357)
T 2uvk_A 304 SQGRA-YGVSLPWNNSLLIIGG 324 (357)
T ss_dssp SSCCB-SSEEEEETTEEEEEEE
T ss_pred CCCcc-cceeEEeCCEEEEEee
Confidence 22211 2344444444544444
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.95 E-value=0.00066 Score=59.12 Aligned_cols=174 Identities=12% Similarity=0.078 Sum_probs=104.7
Q ss_pred ceeeecCCCCCcCCeEEEeecCeEeeeeeec---cccCcceEEEEcCcCccceecCCCccCCCcceeccCcccccceeee
Q 041236 2 KARNLNFPLGKVLHQLIGCCNGLLCIVVQIH---EHAGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFD 78 (281)
Q Consensus 2 ~~~~~~~p~~~~~~~i~~scnGLlcl~~~~~---~~~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d 78 (281)
+|..++-...++...-....+|-|.+..... +......+.++||.|++|..+|+.+..... ++.. +++
T Consensus 78 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~-------~~~ 148 (315)
T 4asc_A 78 EWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG--HTVL-------SHM 148 (315)
T ss_dssp EEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS--CEEE-------EET
T ss_pred eEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc--eeEE-------EEC
Confidence 3555543223334444556688777665432 112346899999999999999765432211 1100 011
Q ss_pred CCCCceEEEEEEeC-C---CCcEEEEEEcCCCCccc------------cccccce-EEeeeccCCcCceEEEEEECCCCe
Q 041236 79 QSTNDYKIVRLVND-D---GITHFQIYSLNTNFWKT------------GILPDRI-HDTKERFRTIFSSVILCFSLVDDK 141 (281)
Q Consensus 79 ~~~~~yKVv~~~~~-~---~~~~~eVys~~~~~Wr~------------~v~~nG~-yWl~~~~~~~~~~~IlsFD~~~e~ 141 (281)
. |++.+.-. + ....+++|+..+++|+. .+.++|. |-+...........+..||+++++
T Consensus 149 ~-----~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 149 D-----LVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp T-----EEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred C-----EEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 1 33333221 1 14578999999999977 4566888 776653322234579999999999
Q ss_pred EEEEe-CCCCcCCCCeeEEEEeCCeEEE-EEecC----CC----CCeEEEEEEcC--CceeeE
Q 041236 142 FRVIL-LPDDVAKGAEFDLFDFGGCLGL-IHCHA----RR----RAHVDIWTRNE--LNWIKI 192 (281)
Q Consensus 142 f~~i~-lP~~~~~~~~~~L~~~~g~L~~-~~~~~----~~----~~~i~IWvL~~--~~W~~~ 192 (281)
|..++ +|... ....+..++|+|.+ ..... .+ ...-+||+++- ..|+++
T Consensus 224 W~~~~~~p~~r---~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 224 WAPFEAFPQER---SSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEEECCCSSCC---BSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred EEECCCCCCcc---cceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 99984 44332 23467788999988 22210 00 12457888875 789998
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.78 E-value=0.0013 Score=57.33 Aligned_cols=174 Identities=17% Similarity=0.233 Sum_probs=102.8
Q ss_pred ceeeecCCCCCcCCeEEEeecCeEeeeeeec--cccCcceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeC
Q 041236 2 KARNLNFPLGKVLHQLIGCCNGLLCIVVQIH--EHAGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQ 79 (281)
Q Consensus 2 ~~~~~~~p~~~~~~~i~~scnGLlcl~~~~~--~~~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~ 79 (281)
+|..++-...++...-...++|-|.+..... +......+.++||.|.+|..+++.+... .+.+ ..+++
T Consensus 89 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~-----~~~~~- 158 (318)
T 2woz_A 89 EWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV----YGHN-----VISHN- 158 (318)
T ss_dssp EEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE----ESCE-----EEEET-
T ss_pred cEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc----cccE-----EEEEC-
Confidence 3555543223344444556688777665432 1112357899999999999997544321 1111 00011
Q ss_pred CCCceEEEEEEe--CC--CCcEEEEEEcCCCCccc------------cccccce-EEeeeccCCcCceEEEEEECCCCeE
Q 041236 80 STNDYKIVRLVN--DD--GITHFQIYSLNTNFWKT------------GILPDRI-HDTKERFRTIFSSVILCFSLVDDKF 142 (281)
Q Consensus 80 ~~~~yKVv~~~~--~~--~~~~~eVys~~~~~Wr~------------~v~~nG~-yWl~~~~~~~~~~~IlsFD~~~e~f 142 (281)
=||..+.- .. ....+++|+..+++|+. .+.++|. |-+...........+..||+++++|
T Consensus 159 ----~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 159 ----GMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp ----TEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred ----CEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 13333321 11 13468999999999987 4567888 7765432211235788999999999
Q ss_pred EEE-eCCCCcCCCCeeEEEEeCCeEEEEE-ecC----C----CCCeEEEEEEcC--CceeeE
Q 041236 143 RVI-LLPDDVAKGAEFDLFDFGGCLGLIH-CHA----R----RRAHVDIWTRNE--LNWIKI 192 (281)
Q Consensus 143 ~~i-~lP~~~~~~~~~~L~~~~g~L~~~~-~~~----~----~~~~i~IWvL~~--~~W~~~ 192 (281)
..+ ++|... ....+..++|+|.+.. ... . ....-+||+++- ..|+++
T Consensus 235 ~~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 235 EVMTEFPQER---SSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EECCCCSSCC---BSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred EECCCCCCcc---cceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 988 344432 2346778899998832 110 0 012457888875 889997
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.75 E-value=0.0027 Score=61.93 Aligned_cols=209 Identities=9% Similarity=0.060 Sum_probs=113.7
Q ss_pred ecCeEeeeeeeccccCcceEEEEcCcCccceecC-CCc-cCCCcceeccCcccccceeeeCCCCceEEEEEEeCC----C
Q 041236 21 CNGLLCIVVQIHEHAGEADLVLWNPWTGRYKTVP-ISV-VGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLVNDD----G 94 (281)
Q Consensus 21 cnGLlcl~~~~~~~~~~~~~~V~NP~Tr~~~~LP-~~~-~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~~~~----~ 94 (281)
.+|-|.+..+... .....++++||.|++|..++ +.+ ...+....+++ .+.-+. +=+|+.+.-.+ .
T Consensus 396 ~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs------~~~~~~--~~~lyv~GG~~~~~~~ 466 (695)
T 2zwa_A 396 AGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHT------FTTISR--NNQLLLIGGRKAPHQG 466 (695)
T ss_dssp CSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCE------EEEETT--TTEEEEECCBSSTTCB
T ss_pred ECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceE------EEEEcc--CCEEEEEcCCCCCCCc
Confidence 5676666554322 23467999999999999998 411 10111111111 001100 11244332211 1
Q ss_pred CcEEEEEEcCCCCccc------------cccc-cce-EEeeeccCCcCceEEEEEECCCCeEEEEe----CCCCcCCCCe
Q 041236 95 ITHFQIYSLNTNFWKT------------GILP-DRI-HDTKERFRTIFSSVILCFSLVDDKFRVIL----LPDDVAKGAE 156 (281)
Q Consensus 95 ~~~~eVys~~~~~Wr~------------~v~~-nG~-yWl~~~~~~~~~~~IlsFD~~~e~f~~i~----lP~~~~~~~~ 156 (281)
...+++|+..+++|+. .+.+ +|. |-+..... .. .+..||+.+.+|..++ +|.... .
T Consensus 467 ~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~--~~-~v~~yd~~t~~W~~~~~~g~~p~~r~---~ 540 (695)
T 2zwa_A 467 LSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTE--GP-AMLLYNVTEEIFKDVTPKDEFFQNSL---V 540 (695)
T ss_dssp CCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCS--SC-SEEEEETTTTEEEECCCSSGGGGSCC---B
T ss_pred cccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCC--CC-CEEEEECCCCceEEccCCCCCCCccc---c
Confidence 3468999999999987 3443 777 77654332 12 7999999999999886 343321 2
Q ss_pred eEEEEeC---CeEEEEE-ec-C--CCCCeEEEEEEcCCc------eeeEEEecCCCCcCccceeeeEEEEecCCcEEEEe
Q 041236 157 FDLFDFG---GCLGLIH-CH-A--RRRAHVDIWTRNELN------WIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHE 223 (281)
Q Consensus 157 ~~L~~~~---g~L~~~~-~~-~--~~~~~i~IWvL~~~~------W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~ 223 (281)
.....++ |+|.+.. .. . .....+.++-++... |+++-..+... +..+. ..+.++|+|++.-
T Consensus 541 ~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~-----R~~~~-~~~~~~~~iyv~G 614 (695)
T 2zwa_A 541 SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQ-----RYGSQ-IKYITPRKLLIVG 614 (695)
T ss_dssp SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGC-----CBSCE-EEEEETTEEEEEC
T ss_pred eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCC-----cccce-EEEeCCCEEEEEC
Confidence 2223334 7888832 21 1 112444455555555 77776633211 12333 3444546777664
Q ss_pred cCCCC---CCCCcEEEEEECCCCeEEEEEEe
Q 041236 224 NDTYP---SHGKDVFYLYSLEKKIFRKFKIE 251 (281)
Q Consensus 224 ~~~~~---~~~~~~l~~Yd~~t~~~~~i~~~ 251 (281)
..... ..... +..||+++++|+.+.++
T Consensus 615 G~~~~~~~~~~~~-v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 615 GTSPSGLFDRTNS-IISLDPLSETLTSIPIS 644 (695)
T ss_dssp CBCSSCCCCTTTS-EEEEETTTTEEEECCCC
T ss_pred CccCCCCCCCCCe-EEEEECCCCeEEEeecc
Confidence 21000 01344 99999999999966443
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.64 E-value=0.014 Score=51.38 Aligned_cols=223 Identities=10% Similarity=-0.031 Sum_probs=117.3
Q ss_pred ceeeecC-CCCCcCCeEEEeecCeEeeeeee-c----cccCcceEEEEcCcCccceecCCCc-cCCCcceeccCcccccc
Q 041236 2 KARNLNF-PLGKVLHQLIGCCNGLLCIVVQI-H----EHAGEADLVLWNPWTGRYKTVPISV-VGLTLDMYGFGYINTFG 74 (281)
Q Consensus 2 ~~~~~~~-p~~~~~~~i~~scnGLlcl~~~~-~----~~~~~~~~~V~NP~Tr~~~~LP~~~-~~~~~~~~g~g~~~~~~ 74 (281)
+|..++- |..++...-....+|-|.+.... . .......+.++||.|++|..+++.+ .... .++..
T Consensus 44 ~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~--~~~~~------ 115 (357)
T 2uvk_A 44 KWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMA--GHVTF------ 115 (357)
T ss_dssp CEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCS--SEEEE------
T ss_pred CeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccc--cceEE------
Confidence 3555542 32344444445568877765543 1 0112467999999999999997644 2111 11100
Q ss_pred eeeeCCCCceEEEEEEeCCC-------------------------------------CcEEEEEEcCCCCccc-------
Q 041236 75 FCFDQSTNDYKIVRLVNDDG-------------------------------------ITHFQIYSLNTNFWKT------- 110 (281)
Q Consensus 75 l~~d~~~~~yKVv~~~~~~~-------------------------------------~~~~eVys~~~~~Wr~------- 110 (281)
+++ + ||+.+.-.++ ...+++|+..+++|+.
T Consensus 116 -~~~---~--~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 189 (357)
T 2uvk_A 116 -VHN---G--KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWY 189 (357)
T ss_dssp -EET---T--EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSC
T ss_pred -EEC---C--EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCC
Confidence 011 1 3333332110 2479999999999976
Q ss_pred ------cccccce-EEeeeccC-CcCceEEEEEEC--CCCeEEEE-eCCCCcCCCCeeEEEEeCCeEEEE--EecC----
Q 041236 111 ------GILPDRI-HDTKERFR-TIFSSVILCFSL--VDDKFRVI-LLPDDVAKGAEFDLFDFGGCLGLI--HCHA---- 173 (281)
Q Consensus 111 ------~v~~nG~-yWl~~~~~-~~~~~~IlsFD~--~~e~f~~i-~lP~~~~~~~~~~L~~~~g~L~~~--~~~~---- 173 (281)
.+.++|. |-+..... ......+..||+ ++.+|..+ .+|..... .......++|+|.+. ....
T Consensus 190 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~-~~~~~~~~~~~iyv~GG~~~~~~~~ 268 (357)
T 2uvk_A 190 GTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV-AGGFAGISNDSLIFAGGAGFKGSRE 268 (357)
T ss_dssp CCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC-BSCEEEEETTEEEEECCEECTTHHH
T ss_pred CcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc-ccceEEEECCEEEEEcCccccCCcc
Confidence 3455777 76643211 111345777887 88899887 34322211 234577889999882 2110
Q ss_pred -----------CCCCeEEEEEEcC--CceeeEEEecCCCCcCccceeeeEEEEecCCcEEEEecCCCCCC-CCcEEEEEE
Q 041236 174 -----------RRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYPSH-GKDVFYLYS 239 (281)
Q Consensus 174 -----------~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~-~~~~l~~Yd 239 (281)
......++|+++- ..|+++-.++.... .+. . +.-+++|++.-....... .. .+..++
T Consensus 269 ~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~------~~~-~-~~~~~~i~v~GG~~~~~~~~~-~v~~l~ 339 (357)
T 2uvk_A 269 NYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRA------YGV-S-LPWNNSLLIIGGETAGGKAVT-DSVLIT 339 (357)
T ss_dssp HHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCB------SSE-E-EEETTEEEEEEEECGGGCEEE-EEEEEE
T ss_pred cccccceeccccccceeeEEEEecCCCceeeCCCCCCCcc------cce-e-EEeCCEEEEEeeeCCCCCEee-eEEEEE
Confidence 0012245666654 88999766554322 222 2 234667766631100000 13 388899
Q ss_pred CCCCeEEEE
Q 041236 240 LEKKIFRKF 248 (281)
Q Consensus 240 ~~t~~~~~i 248 (281)
++++++.+.
T Consensus 340 ~~~~~~~~~ 348 (357)
T 2uvk_A 340 VKDNKVTVQ 348 (357)
T ss_dssp C-CCSCEEE
T ss_pred EcCcEeEee
Confidence 999998877
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.95 E-value=0.067 Score=51.43 Aligned_cols=62 Identities=10% Similarity=-0.087 Sum_probs=35.7
Q ss_pred EEEEEcC--CceeeEE--EecCCCCcCccceeeeEEEEecCCcEEEEecCCCC------CCCCcEEEEEECCCCeEEEEE
Q 041236 180 DIWTRNE--LNWIKIM--CIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYP------SHGKDVFYLYSLEKKIFRKFK 249 (281)
Q Consensus 180 ~IWvL~~--~~W~~~~--~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~------~~~~~~l~~Yd~~t~~~~~i~ 249 (281)
.|++.+- ..|.+.. .++.. +..+. ..+..+|+|++.-..... ..... +..||+++++|+.+.
T Consensus 433 ~v~~yd~~~~~W~~~~~~~mp~~------R~~~~-~~~l~~g~i~v~GG~~~~~~~~~~~~~~~-v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 433 IITLGEPGTSPNTVFASNGLYFA------RTFHT-SVVLPDGSTFITGGQRRGIPFEDSTPVFT-PEIYVPEQDTFYKQN 504 (656)
T ss_dssp EEECCSTTSCCEEEECTTCCSSC------CBSCE-EEECTTSCEEEECCBSBCCTTCCCSBCCC-CEEEEGGGTEEEECC
T ss_pred EEEcCCCCCCCeeEEccCCCCCC------cccCC-eEECCCCCEEEECCcccCcCcCCCCcccc-eEEEcCCCCceeecC
Confidence 4555554 7898764 22221 23343 445568888877521000 00133 899999999999863
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.41 E-value=0.25 Score=48.05 Aligned_cols=174 Identities=11% Similarity=-0.011 Sum_probs=95.6
Q ss_pred ceeeecCCC------CCcCCeEEEee--cCeEeeeeeecccc-CcceEEEEcCcCccceecCCCccCCCcceeccCcccc
Q 041236 2 KARNLNFPL------GKVLHQLIGCC--NGLLCIVVQIHEHA-GEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINT 72 (281)
Q Consensus 2 ~~~~~~~p~------~~~~~~i~~sc--nGLlcl~~~~~~~~-~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~ 72 (281)
+|..++.|+ .++...-.... +|-|.+..+..... ....+.++||.|.+|..+++.+..... ++..
T Consensus 423 ~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~--h~~~---- 496 (695)
T 2zwa_A 423 KIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR--HSAC---- 496 (695)
T ss_dssp CEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS--CEEE----
T ss_pred eEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc--ceEE----
Confidence 466666331 12233334445 88776665433221 235789999999999999765432211 1110
Q ss_pred cceeeeCCCCceEEEEEEeCCCCcEEEEEEcCCCCccc--------------c-cccc---ce-EEeeeccCC--cCceE
Q 041236 73 FGFCFDQSTNDYKIVRLVNDDGITHFQIYSLNTNFWKT--------------G-ILPD---RI-HDTKERFRT--IFSSV 131 (281)
Q Consensus 73 ~~l~~d~~~~~yKVv~~~~~~~~~~~eVys~~~~~Wr~--------------~-v~~n---G~-yWl~~~~~~--~~~~~ 131 (281)
.-. +=||+.+.-.++...+++|+..+++|.. + +.++ |. |-+...... .....
T Consensus 497 ----~~~---~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~ 569 (695)
T 2zwa_A 497 ----SLP---DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDK 569 (695)
T ss_dssp ----ECT---TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCE
T ss_pred ----EEc---CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCc
Confidence 000 1123333221111178999999999976 1 3445 66 665543211 12467
Q ss_pred EEEEECCCCe------EEEEe-CCCCcCCCCeeEEEEeC-CeEEEE-EecCCC--CCeEEEEEEcC--Ccee
Q 041236 132 ILCFSLVDDK------FRVIL-LPDDVAKGAEFDLFDFG-GCLGLI-HCHARR--RAHVDIWTRNE--LNWI 190 (281)
Q Consensus 132 IlsFD~~~e~------f~~i~-lP~~~~~~~~~~L~~~~-g~L~~~-~~~~~~--~~~i~IWvL~~--~~W~ 190 (281)
+.+||+.+.+ |..+. .|.... .......++ |+|.+. ...... ...-+||+++- ..|+
T Consensus 570 v~~yd~~~~~w~~~~~W~~~~~~p~~~R--~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 570 AIIFKYDAENATEPITVIKKLQHPLFQR--YGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEEEEECTTCSSCCEEEEEEEECGGGCC--BSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred EEEEEccCCccccceEEEEcCCCCCCCc--ccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 9999999999 87773 342221 234566777 999883 221101 12445667764 8898
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=92.92 E-value=0.68 Score=44.33 Aligned_cols=141 Identities=8% Similarity=-0.065 Sum_probs=79.9
Q ss_pred CcEEEEEEcC--------CCCccc----------cccc--cce-EEeeeccCC------cCceEEEEEECCCCeEEEE-e
Q 041236 95 ITHFQIYSLN--------TNFWKT----------GILP--DRI-HDTKERFRT------IFSSVILCFSLVDDKFRVI-L 146 (281)
Q Consensus 95 ~~~~eVys~~--------~~~Wr~----------~v~~--nG~-yWl~~~~~~------~~~~~IlsFD~~~e~f~~i-~ 146 (281)
..+++||... +++|+. .+++ +|. |-+...... .....+..||+.+.+|..+ .
T Consensus 157 i~E~~v~~~~~~~~~dp~~~~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~ 236 (656)
T 1k3i_A 157 IAEINVFQASSYTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV 236 (656)
T ss_dssp ESEEEEEECSCCCCCCTTSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE
T ss_pred EEEEEEeeccccccCCCCCCeeeeeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc
Confidence 4567777654 467874 2233 888 776543211 1234689999999999776 3
Q ss_pred CCCCcCCCCeeEEEE-eCCeEEEEEecCCCCCeEEEEEEcC--CceeeEEEecCCCCcCccceeeeEEEEecCCcEEEEe
Q 041236 147 LPDDVAKGAEFDLFD-FGGCLGLIHCHARRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHE 223 (281)
Q Consensus 147 lP~~~~~~~~~~L~~-~~g~L~~~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~ 223 (281)
+|..... ....... .+|+|.+..-. ... ++|+++- ..|++.-.++.. +..+. .++..+|+|++.-
T Consensus 237 ~~~~~~~-~~~~~~~~~~g~lyv~GG~--~~~--~v~~yd~~t~~W~~~~~~~~~------R~~~s-~~~~~dg~iyv~G 304 (656)
T 1k3i_A 237 TVTKHDM-FCPGISMDGNGQIVVTGGN--DAK--KTSLYDSSSDSWIPGPDMQVA------RGYQS-SATMSDGRVFTIG 304 (656)
T ss_dssp EECSCCC-SSCEEEECTTSCEEEECSS--STT--CEEEEEGGGTEEEECCCCSSC------CSSCE-EEECTTSCEEEEC
T ss_pred cCCCCCC-ccccccCCCCCCEEEeCCC--CCC--ceEEecCcCCceeECCCCCcc------ccccc-eEEecCCeEEEEe
Confidence 3332211 1223343 47898883322 123 4666654 889986432221 22333 4445588887775
Q ss_pred cCC-CCCCCCcEEEEEECCCCeEEEE
Q 041236 224 NDT-YPSHGKDVFYLYSLEKKIFRKF 248 (281)
Q Consensus 224 ~~~-~~~~~~~~l~~Yd~~t~~~~~i 248 (281)
... -...... +..||+++++|+.+
T Consensus 305 G~~~~~~~~~~-~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 305 GSWSGGVFEKN-GEVYSPSSKTWTSL 329 (656)
T ss_dssp CCCCSSSCCCC-EEEEETTTTEEEEE
T ss_pred CcccCCccccc-ceEeCCCCCcceeC
Confidence 210 0001134 88999999999987
No 19
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=68.45 E-value=43 Score=26.58 Aligned_cols=196 Identities=10% Similarity=-0.063 Sum_probs=90.2
Q ss_pred EEEeecCeEeeeeeeccccCcceEEEEcCcC-ccceecCCCccCCCcceeccCcccccceeeeCCCCceEEEEEEe-CCC
Q 041236 17 LIGCCNGLLCIVVQIHEHAGEADLVLWNPWT-GRYKTVPISVVGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLVN-DDG 94 (281)
Q Consensus 17 i~~scnGLlcl~~~~~~~~~~~~~~V~NP~T-r~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~~-~~~ 94 (281)
+.-+-+|-.++.. ..+.+++||..+ ++...+....... ....+. +.|... .++.... .++
T Consensus 47 ~~~spdg~~l~~~------~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~--------~spdg~--~l~~~~~~~~~ 108 (297)
T 2ojh_A 47 PNWSPDGKYLLLN------SEGLLYRLSLAGDPSPEKVDTGFATI--CNNDHG--------ISPDGA--LYAISDKVEFG 108 (297)
T ss_dssp EEECTTSSEEEEE------ETTEEEEEESSSCCSCEECCCTTCCC--BCSCCE--------ECTTSS--EEEEEECTTTS
T ss_pred eEECCCCCEEEEE------cCCeEEEEeCCCCCCceEeccccccc--cccceE--------ECCCCC--EEEEEEeCCCC
Confidence 3345566544444 356899999999 8877775433111 011122 554322 2222221 123
Q ss_pred CcEEEEEEcCCCCccc----------cccccce-EEeeeccCCcCceEEEEEECCCCeEEEEeCCCCcCCCCeeEEEEe-
Q 041236 95 ITHFQIYSLNTNFWKT----------GILPDRI-HDTKERFRTIFSSVILCFSLVDDKFRVILLPDDVAKGAEFDLFDF- 162 (281)
Q Consensus 95 ~~~~eVys~~~~~Wr~----------~v~~nG~-yWl~~~~~~~~~~~IlsFD~~~e~f~~i~lP~~~~~~~~~~L~~~- 162 (281)
...+.+++..++.-+. ...-+|. -....... ....|..+|+.+.....+..... ....+.-.
T Consensus 109 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~s~ 182 (297)
T 2ojh_A 109 KSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRD--QVFDIYSMDIDSGVETRLTHGEG----RNDGPDYSP 182 (297)
T ss_dssp SCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEET--TEEEEEEEETTTCCEEECCCSSS----CEEEEEECT
T ss_pred cceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCC--CceEEEEEECCCCcceEcccCCC----ccccceECC
Confidence 4455555554443222 1112333 11111111 23457777777665544322111 11223332
Q ss_pred CCeE-EEEEecCCCCCeEEEEEEcC--CceeeEEEecCCCCcCccceeeeEEEEecCCcEEEE-ecCCC----CC-CCCc
Q 041236 163 GGCL-GLIHCHARRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLH-ENDTY----PS-HGKD 233 (281)
Q Consensus 163 ~g~L-~~~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~-~~~~~----~~-~~~~ 233 (281)
+|.. .+.... ...+.||.++. ... ..+.... ..... +....+|+.++. ....- +. ...
T Consensus 183 dg~~l~~~~~~---~~~~~i~~~~~~~~~~---~~~~~~~-----~~~~~-~~~s~dg~~l~~~~~~~~~~~~~~~~~~- 249 (297)
T 2ojh_A 183 DGRWIYFNSSR---TGQMQIWRVRVDGSSV---ERITDSA-----YGDWF-PHPSPSGDKVVFVSYDADVFDHPRDLDV- 249 (297)
T ss_dssp TSSEEEEEECT---TSSCEEEEEETTSSCE---EECCCCS-----EEEEE-EEECTTSSEEEEEEEETTCCSCCSSEEE-
T ss_pred CCCEEEEEecC---CCCccEEEECCCCCCc---EEEecCC-----cccCC-eEECCCCCEEEEEEcCCCCCcccccCce-
Confidence 4554 434332 56789999873 222 2221111 12333 555678875444 31100 00 013
Q ss_pred EEEEEECCCCeEEEEE
Q 041236 234 VFYLYSLEKKIFRKFK 249 (281)
Q Consensus 234 ~l~~Yd~~t~~~~~i~ 249 (281)
.++.+|+++++.+.+.
T Consensus 250 ~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 250 RVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEEEEETTSCSCEEEE
T ss_pred EEEEEecCCCCceeee
Confidence 4999999998877663
No 20
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=67.14 E-value=59 Score=27.71 Aligned_cols=100 Identities=8% Similarity=-0.086 Sum_probs=49.7
Q ss_pred eEEEEEECCCCeE-EEEeCCCCcCCCCeeEEEEe--CCeEEEEEecCCCCCeEEEEEEcCCceeeEEEecCCCCcCccce
Q 041236 130 SVILCFSLVDDKF-RVILLPDDVAKGAEFDLFDF--GGCLGLIHCHARRRAHVDIWTRNELNWIKIMCIPRLEDVHSSLY 206 (281)
Q Consensus 130 ~~IlsFD~~~e~f-~~i~lP~~~~~~~~~~L~~~--~g~L~~~~~~~~~~~~i~IWvL~~~~W~~~~~i~~~~~~~~~~~ 206 (281)
..|..+|+.+.+- ..+..+.... ....+... ++.+.+.... +..+.||-++. ...+..+.... ..
T Consensus 192 ~~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~l~sg~~---dg~v~~wd~~~--~~~~~~~~~h~-----~~ 259 (344)
T 4gqb_B 192 NRILLWDTRCPKPASQIGCSAPGY--LPTSLAWHPQQSEVFVFGDE---NGTVSLVDTKS--TSCVLSSAVHS-----QC 259 (344)
T ss_dssp SCEEEEETTSSSCEEECC----CC--CEEEEEECSSCTTEEEEEET---TSEEEEEESCC----CCEEEECCS-----SC
T ss_pred cccccccccccceeeeeecceeec--cceeeeecCCCCcceEEecc---CCcEEEEECCC--CcEEEEEcCCC-----CC
Confidence 3577789887653 3332221111 12233332 3555443333 67899997764 12222222111 12
Q ss_pred eeeEEEEecCC-cEEEEecCCCCCCCCcEEEEEECCCCeEEEE
Q 041236 207 LAPVFFYSGAG-EVLLHENDTYPSHGKDVFYLYSLEKKIFRKF 248 (281)
Q Consensus 207 ~~~~~~~~~~g-~ill~~~~~~~~~~~~~l~~Yd~~t~~~~~i 248 (281)
+.- +....+| .+|+... .++. +.+||.+++++.+.
T Consensus 260 v~~-v~fsp~g~~~lasgs-----~D~~-i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 260 VTG-LVFSPHSVPFLASLS-----EDCS-LAVLDSSLSELFRS 295 (344)
T ss_dssp EEE-EEECSSSSCCEEEEE-----TTSC-EEEECTTCCEEEEE
T ss_pred EEE-EEEccCCCeEEEEEe-----CCCe-EEEEECCCCcEEEE
Confidence 333 5556666 4554431 4565 99999999987654
No 21
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=62.90 E-value=58 Score=26.13 Aligned_cols=96 Identities=11% Similarity=-0.023 Sum_probs=50.4
Q ss_pred ceEEEEEECCCCeEEEEeCCCCcCCCCeeEEEEe-CCeEEEEEecCCCCCeEEEEEEcCCceeeEEEecCCCCcCcccee
Q 041236 129 SSVILCFSLVDDKFRVILLPDDVAKGAEFDLFDF-GGCLGLIHCHARRRAHVDIWTRNELNWIKIMCIPRLEDVHSSLYL 207 (281)
Q Consensus 129 ~~~IlsFD~~~e~f~~i~lP~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~~i~IWvL~~~~W~~~~~i~~~~~~~~~~~~ 207 (281)
...|..+|. +.++..+.+|.... .-..+..- +|.|.+.... ...+.+|-.+ ... ..+.++.. ....
T Consensus 203 ~~~i~~~~~-~g~~~~~~~~~~~~--~~~~i~~~~~g~l~v~~~~---~~~i~~~d~~-g~~-~~~~~~~~-----~~~~ 269 (299)
T 2z2n_A 203 GNKIGRITT-SGEITEFKIPTPNA--RPHAITAGAGIDLWFTEWG---ANKIGRLTSN-NII-EEYPIQIK-----SAEP 269 (299)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTC--CEEEEEECSTTCEEEEETT---TTEEEEEETT-TEE-EEEECSSS-----SCCE
T ss_pred CceEEEECC-CCcEEEEECCCCCC--CceeEEECCCCCEEEeccC---CceEEEECCC-Cce-EEEeCCCC-----CCcc
Confidence 346899999 77777776764321 22344443 4777664432 4555554432 211 12222211 1123
Q ss_pred eeEEEEecCCcEEEEecCCCCCCCCcEEEEEECCCCeEE
Q 041236 208 APVFFYSGAGEVLLHENDTYPSHGKDVFYLYSLEKKIFR 246 (281)
Q Consensus 208 ~~~~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~t~~~~ 246 (281)
.. +.. .+|.|++.. .... +..+|+++++++
T Consensus 270 ~~-i~~-~~g~l~v~~------~~~~-l~~~~~~~~~~~ 299 (299)
T 2z2n_A 270 HG-ICF-DGETIWFAM------ECDK-IGKLTLIKDNME 299 (299)
T ss_dssp EE-EEE-CSSCEEEEE------TTTE-EEEEEEC-----
T ss_pred ce-EEe-cCCCEEEEe------cCCc-EEEEEcCcccCC
Confidence 33 555 788898887 4455 999999988754
No 22
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=61.96 E-value=63 Score=28.24 Aligned_cols=18 Identities=28% Similarity=0.368 Sum_probs=14.2
Q ss_pred CcceEEEEcCcCccceec
Q 041236 36 GEADLVLWNPWTGRYKTV 53 (281)
Q Consensus 36 ~~~~~~V~NP~Tr~~~~L 53 (281)
.++.+.|||..+++...+
T Consensus 140 ~dg~i~lWd~~~~~~~~~ 157 (435)
T 4e54_B 140 KGGDIMLWNFGIKDKPTF 157 (435)
T ss_dssp TTSCEEEECSSCCSCCEE
T ss_pred CCCEEEEEECCCCCceeE
Confidence 578999999998875443
No 23
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=60.04 E-value=16 Score=26.51 Aligned_cols=54 Identities=13% Similarity=0.233 Sum_probs=35.7
Q ss_pred cceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCCCCceEEEEEEeCCC--CcEEEEE
Q 041236 37 EADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLVNDDG--ITHFQIY 101 (281)
Q Consensus 37 ~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~~~~~--~~~~eVy 101 (281)
...+++.+|.|+.| +|..... -+.++.|..|+..+.|+|+.....++ ..++++|
T Consensus 10 ~A~V~~~d~~~~~W--~p~~~~~---------g~s~V~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~ 65 (112)
T 1evh_A 10 RAAVMVYDDANKKW--VPAGGST---------GFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIP 65 (112)
T ss_dssp EEEEEEEETTTTEE--EEGGGCC---------SCEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEC
T ss_pred EEEEEEEcCCCCce--EECCCCC---------CceEEEEEEECCCCEEEEEEEECCCCcEEEeeEec
Confidence 46789999999954 5554311 01234455898888999998875443 5566665
No 24
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=60.00 E-value=78 Score=26.70 Aligned_cols=96 Identities=7% Similarity=-0.031 Sum_probs=53.2
Q ss_pred eEEEEEECCCCeEE-EEeCCCCcCCCCeeEEEEe-CCe-EEEEEecCCCCCeEEEEEEcCCceeeEEEecCCCCcCccce
Q 041236 130 SVILCFSLVDDKFR-VILLPDDVAKGAEFDLFDF-GGC-LGLIHCHARRRAHVDIWTRNELNWIKIMCIPRLEDVHSSLY 206 (281)
Q Consensus 130 ~~IlsFD~~~e~f~-~i~lP~~~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~i~IWvL~~~~W~~~~~i~~~~~~~~~~~ 206 (281)
..|..+|+.+.+.. .+..+.. ...+... +|+ |.+.... ...+.+|-+......... .... .
T Consensus 96 ~~v~v~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~~~~~~--~~~~------~ 159 (391)
T 1l0q_A 96 STLSVIDTTSNTVAGTVKTGKS-----PLGLALSPDGKKLYVTNNG---DKTVSVINTVTKAVINTV--SVGR------S 159 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSS-----EEEEEECTTSSEEEEEETT---TTEEEEEETTTTEEEEEE--ECCS------S
T ss_pred CEEEEEECCCCeEEEEEeCCCC-----cceEEECCCCCEEEEEeCC---CCEEEEEECCCCcEEEEE--ecCC------C
Confidence 56888999887653 3343321 2233333 355 4444433 678888877653333322 2211 1
Q ss_pred eeeEEEEecCCcEE-EEecCCCCCCCCcEEEEEECCCCeEEEE
Q 041236 207 LAPVFFYSGAGEVL-LHENDTYPSHGKDVFYLYSLEKKIFRKF 248 (281)
Q Consensus 207 ~~~~~~~~~~g~il-l~~~~~~~~~~~~~l~~Yd~~t~~~~~i 248 (281)
... +....+|+.+ +... .... +..||+++++....
T Consensus 160 ~~~-~~~~~dg~~l~~~~~-----~~~~-v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 160 PKG-IAVTPDGTKVYVANF-----DSMS-ISVIDTVTNSVIDT 195 (391)
T ss_dssp EEE-EEECTTSSEEEEEET-----TTTE-EEEEETTTTEEEEE
T ss_pred cce-EEECCCCCEEEEEeC-----CCCE-EEEEECCCCeEEEE
Confidence 233 5566777655 4431 3454 99999999876554
No 25
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=58.19 E-value=1.3e+02 Score=28.73 Aligned_cols=108 Identities=9% Similarity=0.054 Sum_probs=59.0
Q ss_pred EEeeeccCCcCceEEEEEECCCCeEEEEeCCCCcCCCCeeEEEEe-CCeEEEEEecCCCCCeEEEEEEcC--CceeeEEE
Q 041236 118 HDTKERFRTIFSSVILCFSLVDDKFRVILLPDDVAKGAEFDLFDF-GGCLGLIHCHARRRAHVDIWTRNE--LNWIKIMC 194 (281)
Q Consensus 118 yWl~~~~~~~~~~~IlsFD~~~e~f~~i~lP~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~~i~IWvL~~--~~W~~~~~ 194 (281)
-|+.... ..|..||..+++|..+..+.......-..+.+- +|.|.+.... .+ |..++. ..+.. +
T Consensus 508 lWigt~~-----~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~-----Gl-v~~~d~~~~~~~~-~- 574 (781)
T 3v9f_A 508 FWIGTFG-----GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGE-----GL-VCFPSARNFDYQV-F- 574 (781)
T ss_dssp EEEEESS-----SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEETT-----EE-EEESCTTTCCCEE-E-
T ss_pred EEEEEcC-----CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEECC-----Cc-eEEECCCCCcEEE-c-
Confidence 6666532 348889999999988865443322122344443 4777663321 11 022222 33322 2
Q ss_pred ecCCCCcCccceeeeEEEEecCCcEEEEecCCCCCCCCcEEEEEECCCCeEEEEE
Q 041236 195 IPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYPSHGKDVFYLYSLEKKIFRKFK 249 (281)
Q Consensus 195 i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~t~~~~~i~ 249 (281)
......+ ...+.. +..+.+|.|.+.. . .. +..||+++++++...
T Consensus 575 -~~~~gl~-~~~i~~-i~~d~~g~lW~~t------~-~G-l~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 575 -QRKEGLP-NTHIRA-ISEDKNGNIWAST------N-TG-ISCYITSKKCFYTYD 618 (781)
T ss_dssp -CGGGTCS-CCCCCE-EEECSSSCEEEEC------S-SC-EEEEETTTTEEEEEC
T ss_pred -cccCCCC-CceEEE-EEECCCCCEEEEc------C-Cc-eEEEECCCCceEEec
Confidence 1111111 112344 5567788998887 4 43 999999999988763
No 26
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=55.84 E-value=90 Score=26.12 Aligned_cols=99 Identities=11% Similarity=0.014 Sum_probs=61.6
Q ss_pred ceEEEEEECCCCeE-EEEeCCCCcCCCCeeEEEEeCCeEEEEEecCCCCCeEEEEEEcCCceeeEEEecCCCCcCcccee
Q 041236 129 SSVILCFSLVDDKF-RVILLPDDVAKGAEFDLFDFGGCLGLIHCHARRRAHVDIWTRNELNWIKIMCIPRLEDVHSSLYL 207 (281)
Q Consensus 129 ~~~IlsFD~~~e~f-~~i~lP~~~~~~~~~~L~~~~g~L~~~~~~~~~~~~i~IWvL~~~~W~~~~~i~~~~~~~~~~~~ 207 (281)
...|..+|+++.+- +.+++|+.. ....+...+++|...... .. .+|+.+-..-+.+-+|+....
T Consensus 64 ~S~v~~vD~~Tgkv~~~~~l~~~~---FgeGit~~g~~ly~ltw~---~~--~v~v~D~~t~~~~~ti~~~~e------- 128 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQIELGKRY---FGEGISDWKDKIVGLTWK---NG--LGFVWNIRNLRQVRSFNYDGE------- 128 (262)
T ss_dssp EEEEEEECTTTCCEEEEEECCTTC---CEEEEEEETTEEEEEESS---SS--EEEEEETTTCCEEEEEECSSC-------
T ss_pred CceEEEEECCCCcEEEEEecCCcc---ceeEEEEeCCEEEEEEee---CC--EEEEEECccCcEEEEEECCCC-------
Confidence 46899999999865 777887643 234567778888775432 23 466666655666666666431
Q ss_pred eeEEEEecCCcEEEEecCCCCCCCCcEEEEEECCCCe-EEEEEE
Q 041236 208 APVFFYSGAGEVLLHENDTYPSHGKDVFYLYSLEKKI-FRKFKI 250 (281)
Q Consensus 208 ~~~~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~t~~-~~~i~~ 250 (281)
+ .++..+|+.|+..+ ...+ +...|++|.+ .+.|..
T Consensus 129 -G-~glt~dg~~L~~Sd-----Gs~~-i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 129 -G-WGLTHNDQYLIMSD-----GTPV-LRFLDPESLTPVRTITV 164 (262)
T ss_dssp -C-CCEEECSSCEEECC-----SSSE-EEEECTTTCSEEEEEEC
T ss_pred -c-eEEecCCCEEEEEC-----CCCe-EEEEcCCCCeEEEEEEe
Confidence 1 23345555554442 4454 9999999755 455544
No 27
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=53.87 E-value=99 Score=26.01 Aligned_cols=172 Identities=9% Similarity=-0.009 Sum_probs=85.1
Q ss_pred CcceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCCCCceEEEEEEeCCCCcEEEEEEcCCCCccc-----
Q 041236 36 GEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLVNDDGITHFQIYSLNTNFWKT----- 110 (281)
Q Consensus 36 ~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~~~~~~~~~eVys~~~~~Wr~----- 110 (281)
..+.+.+||+.+++....-..... ..++ +++|..+ + ++.... ..-.+.+++..++....
T Consensus 94 ~~~~v~v~d~~~~~~~~~~~~~~~----~~~~--------~~s~dg~-~-l~~~~~--~~~~v~~~d~~~~~~~~~~~~~ 157 (391)
T 1l0q_A 94 ASSTLSVIDTTSNTVAGTVKTGKS----PLGL--------ALSPDGK-K-LYVTNN--GDKTVSVINTVTKAVINTVSVG 157 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSS----EEEE--------EECTTSS-E-EEEEET--TTTEEEEEETTTTEEEEEEECC
T ss_pred CCCEEEEEECCCCeEEEEEeCCCC----cceE--------EECCCCC-E-EEEEeC--CCCEEEEEECCCCcEEEEEecC
Confidence 347889999998876654322111 1122 2555322 1 111111 12345555555543222
Q ss_pred ------cccccce-EEeeeccCCcCceEEEEEECCCCeEEE-EeCCCCcCCCCeeEEEEe-CCe-EEEEEecCCCCCeEE
Q 041236 111 ------GILPDRI-HDTKERFRTIFSSVILCFSLVDDKFRV-ILLPDDVAKGAEFDLFDF-GGC-LGLIHCHARRRAHVD 180 (281)
Q Consensus 111 ------~v~~nG~-yWl~~~~~~~~~~~IlsFD~~~e~f~~-i~lP~~~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~i~ 180 (281)
...-+|. -|+... ....|..+|+.+.+... +..+.. ...+... +|. |.+.... .....+.
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~----~~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~g~~l~~~~~~-~~~~~v~ 227 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANF----DSMSISVIDTVTNSVIDTVKVEAA-----PSGIAVNPEGTKAYVTNVD-KYFNTVS 227 (391)
T ss_dssp SSEEEEEECTTSSEEEEEET----TTTEEEEEETTTTEEEEEEECSSE-----EEEEEECTTSSEEEEEEEC-SSCCEEE
T ss_pred CCcceEEECCCCCEEEEEeC----CCCEEEEEECCCCeEEEEEecCCC-----ccceEECCCCCEEEEEecC-cCCCcEE
Confidence 2233454 333332 23468889998876533 333211 1223332 344 4443321 0267888
Q ss_pred EEEEcCCceeeEEEecCCCCcCccceeeeEEEEecCCcEE-EEecCCCCCCCCcEEEEEECCCCeEEEE
Q 041236 181 IWTRNELNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVL-LHENDTYPSHGKDVFYLYSLEKKIFRKF 248 (281)
Q Consensus 181 IWvL~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~il-l~~~~~~~~~~~~~l~~Yd~~t~~~~~i 248 (281)
+|-++.. ..+..++... .... +.+..+|+.+ +... .+.. +..||+++++....
T Consensus 228 ~~d~~~~--~~~~~~~~~~------~~~~-~~~s~dg~~l~~s~~-----~d~~-v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 228 MIDTGTN--KITARIPVGP------DPAG-IAVTPDGKKVYVALS-----FXNT-VSVIDTATNTITAT 281 (391)
T ss_dssp EEETTTT--EEEEEEECCS------SEEE-EEECTTSSEEEEEET-----TTTE-EEEEETTTTEEEEE
T ss_pred EEECCCC--eEEEEEecCC------CccE-EEEccCCCEEEEEcC-----CCCE-EEEEECCCCcEEEE
Confidence 8877642 2333443322 1233 5567788755 4432 4465 99999999887654
No 28
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=52.41 E-value=1.1e+02 Score=25.86 Aligned_cols=96 Identities=14% Similarity=0.048 Sum_probs=53.6
Q ss_pred eEEEEEECCCCeEEEEeCCCCcCCCCeeEEEEe-CCe-EEEEEecCCCCCeEEEEEEcC--CceeeEEEecCCCCcCccc
Q 041236 130 SVILCFSLVDDKFRVILLPDDVAKGAEFDLFDF-GGC-LGLIHCHARRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSL 205 (281)
Q Consensus 130 ~~IlsFD~~~e~f~~i~lP~~~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~ 205 (281)
..|..+|+..+....+..... .-..+.-. +|. +.+.... +..+.||-+.. ..-.....+....
T Consensus 185 ~~i~i~d~~~~~~~~~~~h~~----~v~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~------ 251 (383)
T 3ei3_B 185 GRLLLLGLDGHEIFKEKLHKA----KVTHAEFNPRCDWLMATSSV---DATVKLWDLRNIKDKNSYIAEMPHEK------ 251 (383)
T ss_dssp SEEEEEETTSCEEEEEECSSS----CEEEEEECSSCTTEEEEEET---TSEEEEEEGGGCCSTTCEEEEEECSS------
T ss_pred CCEEEEECCCCEEEEeccCCC----cEEEEEECCCCCCEEEEEeC---CCEEEEEeCCCCCcccceEEEecCCC------
Confidence 568888887665555543322 12233333 244 4443333 67899999876 2223333333222
Q ss_pred eeeeEEEEec-CCcEEEEecCCCCCCCCcEEEEEECCCCeE
Q 041236 206 YLAPVFFYSG-AGEVLLHENDTYPSHGKDVFYLYSLEKKIF 245 (281)
Q Consensus 206 ~~~~~~~~~~-~g~ill~~~~~~~~~~~~~l~~Yd~~t~~~ 245 (281)
.... +.... +|+.++... .++. +..||+++++.
T Consensus 252 ~v~~-~~~s~~~~~~l~~~~-----~d~~-i~iwd~~~~~~ 285 (383)
T 3ei3_B 252 PVNA-AYFNPTDSTKLLTTD-----QRNE-IRVYSSYDWSK 285 (383)
T ss_dssp CEEE-EEECTTTSCEEEEEE-----SSSE-EEEEETTBTTS
T ss_pred ceEE-EEEcCCCCCEEEEEc-----CCCc-EEEEECCCCcc
Confidence 2333 55667 787666652 4465 99999987653
No 29
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=52.10 E-value=97 Score=25.38 Aligned_cols=35 Identities=9% Similarity=0.122 Sum_probs=24.7
Q ss_pred EEEecCCcEEEEecCCCCCCCCcEEEEEECCCCe-EEEEEEe
Q 041236 211 FFYSGAGEVLLHENDTYPSHGKDVFYLYSLEKKI-FRKFKIE 251 (281)
Q Consensus 211 ~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~t~~-~~~i~~~ 251 (281)
++++.+|.|++... .... |..||+++++ +..+..+
T Consensus 204 ~~~d~~G~lwva~~-----~~~~-v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 204 MCIDAEGKLWVACY-----NGGR-VIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp EEEBTTSCEEEEEE-----TTTE-EEEECTTTCCEEEEEECS
T ss_pred eEECCCCCEEEEEc-----CCCE-EEEEcCCCceEEEEEECC
Confidence 66788999888872 3454 9999999666 4555444
No 30
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=52.02 E-value=97 Score=25.33 Aligned_cols=184 Identities=11% Similarity=0.020 Sum_probs=92.1
Q ss_pred EeecCeEeeeeeeccccCcceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCCCCceEEEEEEeCCCCcEE
Q 041236 19 GCCNGLLCIVVQIHEHAGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLVNDDGITHF 98 (281)
Q Consensus 19 ~scnGLlcl~~~~~~~~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~~~~~~~~~ 98 (281)
....+.+.+... ..+.+.+||+.|++....-..... . . +++++|..+ .++..... .-.+
T Consensus 6 ~~~~~~~~v~~~-----~~~~v~~~d~~~~~~~~~~~~~~~--~-~---------~~~~s~dg~--~l~~~~~~--~~~i 64 (331)
T 3u4y_A 6 QTTSNFGIVVEQ-----HLRRISFFSTDTLEILNQITLGYD--F-V---------DTAITSDCS--NVVVTSDF--CQTL 64 (331)
T ss_dssp -CCCCEEEEEEG-----GGTEEEEEETTTCCEEEEEECCCC--E-E---------EEEECSSSC--EEEEEEST--TCEE
T ss_pred cCCCCEEEEEec-----CCCeEEEEeCcccceeeeEEccCC--c-c---------eEEEcCCCC--EEEEEeCC--CCeE
Confidence 334455555552 467899999999987654221111 0 1 233666533 22222211 2245
Q ss_pred EEEEcCCCCc-cc---------c-c--cccceEEeeeccCCcCceEEEEEECCCCeE-EEEeCCCCcCCCCeeEEEEe-C
Q 041236 99 QIYSLNTNFW-KT---------G-I--LPDRIHDTKERFRTIFSSVILCFSLVDDKF-RVILLPDDVAKGAEFDLFDF-G 163 (281)
Q Consensus 99 eVys~~~~~W-r~---------~-v--~~nG~yWl~~~~~~~~~~~IlsFD~~~e~f-~~i~lP~~~~~~~~~~L~~~-~ 163 (281)
.+++..++.- .. . + .-+|.+....... .....|..+|+.+.+. ..++.+... ..+... +
T Consensus 65 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~i~v~d~~~~~~~~~~~~~~~~-----~~~~~spd 138 (331)
T 3u4y_A 65 VQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGL-NHPFNMQSYSFLKNKFISTIPIPYDA-----VGIAISPN 138 (331)
T ss_dssp EEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCS-SSSCEEEEEETTTTEEEEEEECCTTE-----EEEEECTT
T ss_pred EEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCC-CCcccEEEEECCCCCeEEEEECCCCc-----cceEECCC
Confidence 5666655443 11 1 2 2345432232111 0122799999988765 334443221 233333 3
Q ss_pred Ce-EEEEEecCCCCCe-EEEEEEcC-Cce-ee-EEEecCCCCcCccceeeeEEEEecCCc-EEEEecCCCCCCCCcEEEE
Q 041236 164 GC-LGLIHCHARRRAH-VDIWTRNE-LNW-IK-IMCIPRLEDVHSSLYLAPVFFYSGAGE-VLLHENDTYPSHGKDVFYL 237 (281)
Q Consensus 164 g~-L~~~~~~~~~~~~-i~IWvL~~-~~W-~~-~~~i~~~~~~~~~~~~~~~~~~~~~g~-ill~~~~~~~~~~~~~l~~ 237 (281)
|+ |.+.... ... +.+|.++. ..- .. ...+... ..... +.+..+|+ +++... .... +..
T Consensus 139 g~~l~~~~~~---~~~~i~~~~~~~~g~~~~~~~~~~~~~------~~~~~-~~~spdg~~l~v~~~-----~~~~-v~v 202 (331)
T 3u4y_A 139 GNGLILIDRS---SANTVRRFKIDADGVLFDTGQEFISGG------TRPFN-ITFTPDGNFAFVANL-----IGNS-IGI 202 (331)
T ss_dssp SSCEEEEEET---TTTEEEEEEECTTCCEEEEEEEEECSS------SSEEE-EEECTTSSEEEEEET-----TTTE-EEE
T ss_pred CCEEEEEecC---CCceEEEEEECCCCcEeecCCccccCC------CCccc-eEECCCCCEEEEEeC-----CCCe-EEE
Confidence 54 5554433 455 99999986 222 11 1122111 12344 66778887 445442 3454 999
Q ss_pred EECCCCeE
Q 041236 238 YSLEKKIF 245 (281)
Q Consensus 238 Yd~~t~~~ 245 (281)
||+++++.
T Consensus 203 ~d~~~~~~ 210 (331)
T 3u4y_A 203 LETQNPEN 210 (331)
T ss_dssp EECSSTTS
T ss_pred EECCCCcc
Confidence 99998774
No 31
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=51.26 E-value=1.7e+02 Score=27.90 Aligned_cols=56 Identities=13% Similarity=0.281 Sum_probs=33.7
Q ss_pred CCeEEEEEEcC--CceeeEEEecCCCCcCccceeeeEEEEecC---CcEEEEecCCCCCCCCcEEEEEECCCC
Q 041236 176 RAHVDIWTRNE--LNWIKIMCIPRLEDVHSSLYLAPVFFYSGA---GEVLLHENDTYPSHGKDVFYLYSLEKK 243 (281)
Q Consensus 176 ~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~---g~ill~~~~~~~~~~~~~l~~Yd~~t~ 243 (281)
...+.||-+.. ..+.....+..... ...- +....+ |.+++... .++. +..||++++
T Consensus 179 dg~I~iwd~~~~~~~~~~~~~~~~h~~-----~V~~-l~~sp~~~~~~~l~s~s-----~Dg~-I~iwd~~~~ 239 (753)
T 3jro_A 179 DNLVKIWKYNSDAQTYVLESTLEGHSD-----WVRD-VAWSPTVLLRSYLASVS-----QDRT-CIIWTQDNE 239 (753)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCSS-----CEEE-EEECCCCSSSEEEEEEE-----SSSC-EEEEEESSS
T ss_pred CCeEEEEeccCCcccceeeeeecCCCC-----cEEE-EEeccCCCCCCEEEEEe-----cCCE-EEEecCCCC
Confidence 67899999976 55666655543221 2333 444555 66655542 3454 888888775
No 32
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=49.66 E-value=1.1e+02 Score=25.17 Aligned_cols=100 Identities=11% Similarity=0.033 Sum_probs=54.1
Q ss_pred eEEEEEECCCCeE-EEEeCCCCcCCCCeeEEEEe-CC-eEEEEEecCCCCCeEEEEEEcCCceeeEEEecCCCCcCccce
Q 041236 130 SVILCFSLVDDKF-RVILLPDDVAKGAEFDLFDF-GG-CLGLIHCHARRRAHVDIWTRNELNWIKIMCIPRLEDVHSSLY 206 (281)
Q Consensus 130 ~~IlsFD~~~e~f-~~i~lP~~~~~~~~~~L~~~-~g-~L~~~~~~~~~~~~i~IWvL~~~~W~~~~~i~~~~~~~~~~~ 206 (281)
..|..+|+.+.+. ..+..+..........+... +| .|.+.... ...+.+|-++...- ...++....
T Consensus 206 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~~--~~~~~~~~~------ 274 (353)
T 3vgz_A 206 GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK---AAEVLVVDTRNGNI--LAKVAAPES------ 274 (353)
T ss_dssp SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---SSEEEEEETTTCCE--EEEEECSSC------
T ss_pred CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---CCEEEEEECCCCcE--EEEEEcCCC------
Confidence 4688899998865 44555433111112233333 34 45444432 57777776654332 333332211
Q ss_pred eeeEEEEecCCc-EEEEecCCCCCCCCcEEEEEECCCCeEEEE
Q 041236 207 LAPVFFYSGAGE-VLLHENDTYPSHGKDVFYLYSLEKKIFRKF 248 (281)
Q Consensus 207 ~~~~~~~~~~g~-ill~~~~~~~~~~~~~l~~Yd~~t~~~~~i 248 (281)
.. +.+..+|+ +++... .... +..||.++++....
T Consensus 275 -~~-~~~s~dg~~l~v~~~-----~~~~-v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 275 -LA-VLFNPARNEAYVTHR-----QAGK-VSVIDAKSYKVVKT 309 (353)
T ss_dssp -CC-EEEETTTTEEEEEET-----TTTE-EEEEETTTTEEEEE
T ss_pred -ce-EEECCCCCEEEEEEC-----CCCe-EEEEECCCCeEEEE
Confidence 22 55677887 444442 3454 99999998886554
No 33
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=49.03 E-value=1.1e+02 Score=25.18 Aligned_cols=98 Identities=5% Similarity=-0.011 Sum_probs=63.6
Q ss_pred ceEEEEEECCCCeE-EEEeCCCCcCCCCeeEEEEeCCeEEEEEecCCCCCeEEEEEEcCCceeeEEEecCCCCcCcccee
Q 041236 129 SSVILCFSLVDDKF-RVILLPDDVAKGAEFDLFDFGGCLGLIHCHARRRAHVDIWTRNELNWIKIMCIPRLEDVHSSLYL 207 (281)
Q Consensus 129 ~~~IlsFD~~~e~f-~~i~lP~~~~~~~~~~L~~~~g~L~~~~~~~~~~~~i~IWvL~~~~W~~~~~i~~~~~~~~~~~~ 207 (281)
...|..+|+++.+- +.+++|... ....+...+++|....-. .. .+|+.+-..-+++-+++....
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~~---fgeGi~~~~~~ly~ltw~---~~--~v~v~D~~tl~~~~ti~~~~~------- 106 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPPY---FGAGIVAWRDRLIQLTWR---NH--EGFVYDLATLTPRARFRYPGE------- 106 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTTC---CEEEEEEETTEEEEEESS---SS--EEEEEETTTTEEEEEEECSSC-------
T ss_pred CceEEEEECCCCCEEEEEeCCCCc---ceeEEEEeCCEEEEEEee---CC--EEEEEECCcCcEEEEEeCCCC-------
Confidence 46899999999865 777888754 234567778998885432 23 466776666666667766431
Q ss_pred eeEEEEecCCc-EEEEecCCCCCCCCcEEEEEECCCCeE-EEEEE
Q 041236 208 APVFFYSGAGE-VLLHENDTYPSHGKDVFYLYSLEKKIF-RKFKI 250 (281)
Q Consensus 208 ~~~~~~~~~g~-ill~~~~~~~~~~~~~l~~Yd~~t~~~-~~i~~ 250 (281)
+ .++..+|+ +++.. ...+ +...|++|.+. ++|..
T Consensus 107 -G-wglt~dg~~L~vSd------gs~~-l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 107 -G-WALTSDDSHLYMSD------GTAV-IRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp -C-CEEEECSSCEEEEC------SSSE-EEEECTTTCCEEEEEEC
T ss_pred -c-eEEeeCCCEEEEEC------CCCe-EEEEeCCCCeEEEEEEE
Confidence 2 34445554 55555 5555 99999998654 55544
No 34
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=47.48 E-value=1.4e+02 Score=25.76 Aligned_cols=28 Identities=14% Similarity=0.435 Sum_probs=21.2
Q ss_pred eecCeEeeeeeeccccCcceEEEEcCcCccceecC
Q 041236 20 CCNGLLCIVVQIHEHAGEADLVLWNPWTGRYKTVP 54 (281)
Q Consensus 20 scnGLlcl~~~~~~~~~~~~~~V~NP~Tr~~~~LP 54 (281)
|.+++|.... ++.++|||..|++...+-
T Consensus 114 S~~n~lAvgl-------d~tV~lWd~~tg~~~~~~ 141 (420)
T 4gga_A 114 SSGNVLAVAL-------DNSVYLWSASSGDILQLL 141 (420)
T ss_dssp CTTSEEEEEE-------TTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEe-------CCEEEEEECCCCCEEEEE
Confidence 5667666543 678999999999987653
No 35
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=46.89 E-value=1.4e+02 Score=25.56 Aligned_cols=190 Identities=9% Similarity=-0.011 Sum_probs=92.3
Q ss_pred eecCeEeeeeeeccccCcceEEEEcCcCccceec-CCCccCCCcceeccCcccccceeeeCCCCceEEEEEEeCCCCcEE
Q 041236 20 CCNGLLCIVVQIHEHAGEADLVLWNPWTGRYKTV-PISVVGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLVNDDGITHF 98 (281)
Q Consensus 20 scnGLlcl~~~~~~~~~~~~~~V~NP~Tr~~~~L-P~~~~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~~~~~~~~~ 98 (281)
+.+|-+++... ..+.+.+|++.+++.... +..... ..+ ++++|..+ + ++..... .-.+
T Consensus 178 ~~~~~~~~s~~-----~d~~v~~~d~~~~~~~~~~~~~~~~----~~~--------~~~~~~~~-~-l~~~~~~--~~~i 236 (433)
T 3bws_A 178 PEHNELWVSQM-----QANAVHVFDLKTLAYKATVDLTGKW----SKI--------LLYDPIRD-L-VYCSNWI--SEDI 236 (433)
T ss_dssp GGGTEEEEEEG-----GGTEEEEEETTTCCEEEEEECSSSS----EEE--------EEEETTTT-E-EEEEETT--TTEE
T ss_pred cCCCEEEEEEC-----CCCEEEEEECCCceEEEEEcCCCCC----eeE--------EEEcCCCC-E-EEEEecC--CCcE
Confidence 45676655552 467899999988765433 311110 112 23665432 1 2111211 2245
Q ss_pred EEEEcCCCCccc-----------cccccce-EEeeeccCCc---CceEEEEEECCCCeEEEE-eCCCCcCCCCeeEEEEe
Q 041236 99 QIYSLNTNFWKT-----------GILPDRI-HDTKERFRTI---FSSVILCFSLVDDKFRVI-LLPDDVAKGAEFDLFDF 162 (281)
Q Consensus 99 eVys~~~~~Wr~-----------~v~~nG~-yWl~~~~~~~---~~~~IlsFD~~~e~f~~i-~lP~~~~~~~~~~L~~~ 162 (281)
.+++..++.... .+.-+|. -+........ ....|..+|+.+.+.... ..+.. ...+...
T Consensus 237 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~ 311 (433)
T 3bws_A 237 SVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN-----KRHIVSG 311 (433)
T ss_dssp EEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC-----EEEEEEC
T ss_pred EEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC-----cceEEEC
Confidence 666665543322 1223454 3333321100 134788899987755332 22221 1122222
Q ss_pred -CC-eEEEEEecCCCCCeEEEEEEcCCceeeEEEecCCCCcCccceeeeEEEEecCCcEEEEecCCCC----------CC
Q 041236 163 -GG-CLGLIHCHARRRAHVDIWTRNELNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYP----------SH 230 (281)
Q Consensus 163 -~g-~L~~~~~~~~~~~~i~IWvL~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~----------~~ 230 (281)
+| .|.+.... ...+.+|-++. ......++... .... +....+|+.++.....-. +.
T Consensus 312 ~~g~~l~~~~~~---~~~v~v~d~~~--~~~~~~~~~~~------~~~~-~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~ 379 (433)
T 3bws_A 312 NTENKIYVSDMC---CSKIEVYDLKE--KKVQKSIPVFD------KPNT-IALSPDGKYLYVSCRGPNHPTEGYLKKGLV 379 (433)
T ss_dssp SSTTEEEEEETT---TTEEEEEETTT--TEEEEEEECSS------SEEE-EEECTTSSEEEEEECCCCCTTTCTTSCCSS
T ss_pred CCCCEEEEEecC---CCEEEEEECCC--CcEEEEecCCC------CCCe-EEEcCCCCEEEEEecCCCcccccccccccc
Confidence 34 45444443 67888888764 23333443322 2334 666788875554311000 00
Q ss_pred CCcEEEEEECCCCeEEEE
Q 041236 231 GKDVFYLYSLEKKIFRKF 248 (281)
Q Consensus 231 ~~~~l~~Yd~~t~~~~~i 248 (281)
++. +..||+++++....
T Consensus 380 dg~-v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 380 LGK-VYVIDTTTDTVKEF 396 (433)
T ss_dssp CCE-EEEEETTTTEEEEE
T ss_pred ceE-EEEEECCCCcEEEE
Confidence 235 99999999886654
No 36
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=45.30 E-value=1.5e+02 Score=25.70 Aligned_cols=178 Identities=11% Similarity=-0.009 Sum_probs=84.4
Q ss_pred ceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCCCCceEEEEEEeCCCCcEEEEEEcCCCCccc-------
Q 041236 38 ADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLVNDDGITHFQIYSLNTNFWKT------- 110 (281)
Q Consensus 38 ~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~~~~~~~~~eVys~~~~~Wr~------- 110 (281)
..+.+||..+++.+.|...... .... ++.|..+ +++......+...+.++++.++..+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~----v~~~--------~~Spdg~--~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~ 224 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQP----LMSP--------AWSPDGS--KLAYVTFESGRSALVIQTLANGAVRQVASFPRH 224 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSC----EEEE--------EECTTSS--EEEEEECTTSSCEEEEEETTTCCEEEEECCSSC
T ss_pred ceEEEEcCCCCCCEEEeCCCCc----ceee--------EEcCCCC--EEEEEEecCCCcEEEEEECCCCcEEEeecCCCc
Confidence 6899999988776666432211 1111 2444322 23333322234456666666554332
Q ss_pred ----cccccce-EEeeeccCCcCceEEEEEECCCCeEEEEeCCCCcCCCCeeEEEEe-CCe-EEEEEecCCCCCeEEEEE
Q 041236 111 ----GILPDRI-HDTKERFRTIFSSVILCFSLVDDKFRVILLPDDVAKGAEFDLFDF-GGC-LGLIHCHARRRAHVDIWT 183 (281)
Q Consensus 111 ----~v~~nG~-yWl~~~~~~~~~~~IlsFD~~~e~f~~i~lP~~~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~i~IWv 183 (281)
...-+|. -.+..... ....|..+|+.+.+...+..... ....+.-. +|+ |++.... .....||+
T Consensus 225 ~~~~~~spdg~~la~~~~~~--g~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~spdg~~l~~~s~~---~g~~~i~~ 295 (415)
T 2hqs_A 225 NGAPAFSPDGSKLAFALSKT--GSLNLYVMDLASGQIRQVTDGRS----NNTEPTWFPDSQNLAFTSDQ---AGRPQVYK 295 (415)
T ss_dssp EEEEEECTTSSEEEEEECTT--SSCEEEEEETTTCCEEECCCCSS----CEEEEEECTTSSEEEEEECT---TSSCEEEE
T ss_pred ccCEEEcCCCCEEEEEEecC--CCceEEEEECCCCCEEeCcCCCC----cccceEECCCCCEEEEEECC---CCCcEEEE
Confidence 1122444 11111111 23458888998876654422111 12233322 455 4444332 34456777
Q ss_pred EcCCceeeEEEecCCCCcCccceeeeEEEEecCCcEEEEecCCCCCCCCcEEEEEECCCCeEEEE
Q 041236 184 RNELNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYPSHGKDVFYLYSLEKKIFRKF 248 (281)
Q Consensus 184 L~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~t~~~~~i 248 (281)
++-..-.. .++.... ..... +....+|+.++..... ..... +..+|+++++.+.+
T Consensus 296 ~d~~~~~~-~~l~~~~-----~~~~~-~~~spdG~~l~~~~~~--~g~~~-i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 296 VNINGGAP-QRITWEG-----SQNQD-ADVSSDGKFMVMVSSN--GGQQH-IAKQDLATGGVQVL 350 (415)
T ss_dssp EETTSSCC-EECCCSS-----SEEEE-EEECTTSSEEEEEEEC--SSCEE-EEEEETTTCCEEEC
T ss_pred EECCCCCE-EEEecCC-----CcccC-eEECCCCCEEEEEECc--CCceE-EEEEECCCCCEEEe
Confidence 76411111 1222111 12333 4556788755443110 01244 99999999988765
No 37
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=45.21 E-value=1.3e+02 Score=24.86 Aligned_cols=121 Identities=6% Similarity=-0.024 Sum_probs=0.0
Q ss_pred cce-EEeeeccCCcCceEEEEEECCCCeEEEE-eCCCCcCCCCeeEEEEeCCeEEEEEecCCCCCeEEEEEEcC-Cceee
Q 041236 115 DRI-HDTKERFRTIFSSVILCFSLVDDKFRVI-LLPDDVAKGAEFDLFDFGGCLGLIHCHARRRAHVDIWTRNE-LNWIK 191 (281)
Q Consensus 115 nG~-yWl~~~~~~~~~~~IlsFD~~~e~f~~i-~lP~~~~~~~~~~L~~~~g~L~~~~~~~~~~~~i~IWvL~~-~~W~~ 191 (281)
+|. |...... ....|..+|+.+++.+.+ .++..........+..-+..|.+.... ...+.+|-++. .....
T Consensus 50 dg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~---~~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 50 KDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH---KGTAEVMKIAADGALTL 123 (347)
T ss_dssp TCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT---TTEEEEEEECTTSCEEE
T ss_pred CCeEEEEEecC---CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC---CCEEEEEEeCCCCCeee
Q ss_pred EEEecCCCCcC----ccceeeeEEEEecCCcEEEEecCCCCCCCCcEEEEEECC-CCeEEEE
Q 041236 192 IMCIPRLEDVH----SSLYLAPVFFYSGAGEVLLHENDTYPSHGKDVFYLYSLE-KKIFRKF 248 (281)
Q Consensus 192 ~~~i~~~~~~~----~~~~~~~~~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~-t~~~~~i 248 (281)
...+......+ ......- +.+..+|++++.. .....+..||++ ++++..+
T Consensus 124 ~~~~~~~~~~p~~~~~~~~~~~-~~~spdg~l~v~~------~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 124 TDTVQHSGHGPRPEQDGSHIHY-TDLTPDNRLAVID------LGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEEECCCCCSSTTCSSCCEEE-EEECTTSCEEEEE------TTTTEEEEEEECTTSCEEEE
T ss_pred cceeecCCCCCCccccCCCceE-EEECCCCcEEEEe------CCCCEEEEEEECCCCcEEEe
No 38
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=41.50 E-value=1.5e+02 Score=24.45 Aligned_cols=70 Identities=9% Similarity=0.239 Sum_probs=44.0
Q ss_pred CeEEEEEecCCCCCeEEEEEEcCCceeeEEEecCCCCcCccceeeeEEEEecCCcEEEEecCCCCCCCCcEEEEEECCCC
Q 041236 164 GCLGLIHCHARRRAHVDIWTRNELNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYPSHGKDVFYLYSLEKK 243 (281)
Q Consensus 164 g~L~~~~~~~~~~~~i~IWvL~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~t~ 243 (281)
|.+.+.... ...+.||-++...|.....+..... .... +....+|+.++... .++. +..||++++
T Consensus 20 ~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~~h~~-----~v~~-~~~~~~~~~l~~~~-----~dg~-i~vwd~~~~ 84 (372)
T 1k8k_C 20 RTQIAICPN---NHEVHIYEKSGNKWVQVHELKEHNG-----QVTG-VDWAPDSNRIVTCG-----TDRN-AYVWTLKGR 84 (372)
T ss_dssp SSEEEEECS---SSEEEEEEEETTEEEEEEEEECCSS-----CEEE-EEEETTTTEEEEEE-----TTSC-EEEEEEETT
T ss_pred CCEEEEEeC---CCEEEEEeCCCCcEEeeeeecCCCC-----cccE-EEEeCCCCEEEEEc-----CCCe-EEEEECCCC
Confidence 554443332 6789999988776777766643221 2444 55667777666542 4465 889999888
Q ss_pred eEEEE
Q 041236 244 IFRKF 248 (281)
Q Consensus 244 ~~~~i 248 (281)
+....
T Consensus 85 ~~~~~ 89 (372)
T 1k8k_C 85 TWKPT 89 (372)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 75544
No 39
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=40.13 E-value=27 Score=25.63 Aligned_cols=41 Identities=27% Similarity=0.438 Sum_probs=28.1
Q ss_pred cceEEEEcCcCc-cceecCCCccCCCcceeccCcccccceeeeCCCCceEEEEEE
Q 041236 37 EADLVLWNPWTG-RYKTVPISVVGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLV 90 (281)
Q Consensus 37 ~~~~~V~NP~Tr-~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~ 90 (281)
...+++.+|.|+ .|. |..... .++.+.+|+..+.|+|+.+.
T Consensus 10 rA~V~~~D~~tk~~W~--p~g~~~-----------~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 10 RAHVFQIDPNTKKNWV--PTSKHA-----------VTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEEECTTTSCSEE--ESCSSC-----------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcCCCCCceE--eCCCCc-----------eEEEEEEcCCCCEEEEEEcc
Confidence 467899999996 875 332211 23444589888889999865
No 40
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=38.35 E-value=1.7e+02 Score=24.32 Aligned_cols=117 Identities=10% Similarity=0.051 Sum_probs=62.4
Q ss_pred ccce-EEeeeccCCcCceEEEEEECCCCeEE-EEeCCCCcCC-CCeeEEEEeCCeEEEEEecCCCCCeEEEEEEcCCcee
Q 041236 114 PDRI-HDTKERFRTIFSSVILCFSLVDDKFR-VILLPDDVAK-GAEFDLFDFGGCLGLIHCHARRRAHVDIWTRNELNWI 190 (281)
Q Consensus 114 ~nG~-yWl~~~~~~~~~~~IlsFD~~~e~f~-~i~lP~~~~~-~~~~~L~~~~g~L~~~~~~~~~~~~i~IWvL~~~~W~ 190 (281)
-+|. |.... ....|..+|..+.+.. .++++..... ..-..+..-+++|.+.... ....+.++-++.....
T Consensus 93 ~~g~lyv~~~-----~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~--~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 93 SDEKAYVTQI-----WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS--YQNRILKIDTETDKVV 165 (328)
T ss_dssp ETTEEEEEEB-----SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT--TCCEEEEEETTTTEEE
T ss_pred CCCeEEEEEC-----CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC--CCCEEEEEECCCCeEE
Confidence 4666 65442 1357999999998764 6776651100 0011233467888775431 1345444443333333
Q ss_pred eEEEecCCCCcCccceeeeEEEEecCCcEEEEecCCCCCC-----CCcEEEEEECCCCeEEE
Q 041236 191 KIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYPSH-----GKDVFYLYSLEKKIFRK 247 (281)
Q Consensus 191 ~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~-----~~~~l~~Yd~~t~~~~~ 247 (281)
.+++.... ... +.++.+|++++.....+... ... +..+|++++++..
T Consensus 166 --~~i~~g~~------p~~-i~~~~dG~l~v~~~~~~~~~~~~~~~~~-v~~id~~t~~v~~ 217 (328)
T 3dsm_A 166 --DELTIGIQ------PTS-LVMDKYNKMWTITDGGYEGSPYGYEAPS-LYRIDAETFTVEK 217 (328)
T ss_dssp --EEEECSSC------BCC-CEECTTSEEEEEBCCBCTTCSSCBCCCE-EEEEETTTTEEEE
T ss_pred --EEEEcCCC------ccc-eEEcCCCCEEEEECCCccCCccccCCce-EEEEECCCCeEEE
Confidence 33333221 223 55678889887763210000 144 9999999998764
No 41
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=37.22 E-value=53 Score=23.80 Aligned_cols=55 Identities=15% Similarity=0.305 Sum_probs=36.1
Q ss_pred cceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCCCCceEEEEEEeC-CC--CcEEEEE
Q 041236 37 EADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLVND-DG--ITHFQIY 101 (281)
Q Consensus 37 ~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~~~-~~--~~~~eVy 101 (281)
...+++.+|.|+.| +|...... | +.++.|..|+..+.|.|+..... ++ ..++++|
T Consensus 10 ~A~V~~~d~~~~~W--~p~~~g~~-----g---vs~V~~~~d~~~~~yrI~~~~l~~~~~vv~~~~l~ 67 (115)
T 1egx_A 10 RATVMLYDDGNKRW--LPAGTGPQ-----A---FSRVQIYHNPTANSFRVVGRKMQPDQQVVINCAIV 67 (115)
T ss_dssp EEECBEECTTTSSC--CBSSCSCC-----C---CEEEEEEEETTTTEEEEEEEESSTTCCEEEEEEEC
T ss_pred EEEEEEEcCCCCce--eECCCCCC-----C---ccEEEEEEeCCCCEEEEEEEEcCCCCEEEEeeEEc
Confidence 45788999999996 45543210 0 12344558988899999988754 43 5567775
No 42
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=36.90 E-value=1.8e+02 Score=24.13 Aligned_cols=105 Identities=13% Similarity=0.098 Sum_probs=58.9
Q ss_pred eEEEEEECCCCeEEEEe-CCCCcCC-CCeeEEEEe-CCeEEEEEecCCC-CCeEEEEEEcC--CceeeEEEecCCCCcCc
Q 041236 130 SVILCFSLVDDKFRVIL-LPDDVAK-GAEFDLFDF-GGCLGLIHCHARR-RAHVDIWTRNE--LNWIKIMCIPRLEDVHS 203 (281)
Q Consensus 130 ~~IlsFD~~~e~f~~i~-lP~~~~~-~~~~~L~~~-~g~L~~~~~~~~~-~~~i~IWvL~~--~~W~~~~~i~~~~~~~~ 203 (281)
..|..+|+.+.++..+. ++..... .....+... +|+..+.... . ...+.||.++. ..+..+..++. ..
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~--~~~~~i~v~~~~~~~g~~~~~~~~~~-g~--- 306 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR--LKADGVAIFKVDETNGTLTKVGYQLT-GI--- 306 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC--SSSCEEEEEEECTTTCCEEEEEEEEC-SS---
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC--CCCCEEEEEEEcCCCCcEEEeeEecC-CC---
Confidence 45778888777665442 2221111 012233333 4664333322 2 57899999973 67777666655 21
Q ss_pred cceeeeEEEEecCCcEEEEecCCCCCCCCcEEEE--EECCCCeEEEE
Q 041236 204 SLYLAPVFFYSGAGEVLLHENDTYPSHGKDVFYL--YSLEKKIFRKF 248 (281)
Q Consensus 204 ~~~~~~~~~~~~~g~ill~~~~~~~~~~~~~l~~--Yd~~t~~~~~i 248 (281)
..+. +.+..+|+.++.... .... +.. +|+++++++.+
T Consensus 307 --~~~~-~~~spdg~~l~~~~~----~~~~-v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 307 --HPRN-FIITPNGKYLLVACR----DTNV-IQIFERDQATGLLTDI 345 (361)
T ss_dssp --CCCE-EEECTTSCEEEEEET----TTTE-EEEEEECTTTCCEEEC
T ss_pred --CCce-EEECCCCCEEEEEEC----CCCC-EEEEEEECCCCcEeec
Confidence 2334 667788885544421 2333 444 68889998877
No 43
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=34.61 E-value=36 Score=26.62 Aligned_cols=41 Identities=27% Similarity=0.438 Sum_probs=28.3
Q ss_pred cceEEEEcCcCc-cceecCCCccCCCcceeccCcccccceeeeCCCCceEEEEEE
Q 041236 37 EADLVLWNPWTG-RYKTVPISVVGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLV 90 (281)
Q Consensus 37 ~~~~~V~NP~Tr-~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~ 90 (281)
...+++.+|.|+ .|+ |..... .++.+.+|+..+.|+|+.+.
T Consensus 15 rA~Vm~~D~~tk~~Wv--P~g~~~-----------~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 15 RAHVFQIDPNTKKNWV--PTSKHA-----------VTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEEECTTSSCCSE--ESCSSC-----------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEECCCCCCcee--ecCCCC-----------eEEEEEEcCCCCEEEEEEcc
Confidence 457899999997 775 322211 14445589888889999875
No 44
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=34.51 E-value=1.4e+02 Score=25.83 Aligned_cols=58 Identities=10% Similarity=-0.050 Sum_probs=40.3
Q ss_pred EEEEEEcCCceeeEEEecCCCCcCccceeeeEEEEecCCc-EEEEecCCCCCCCCcEEEEEECCCCeEEEE
Q 041236 179 VDIWTRNELNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGE-VLLHENDTYPSHGKDVFYLYSLEKKIFRKF 248 (281)
Q Consensus 179 i~IWvL~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~-ill~~~~~~~~~~~~~l~~Yd~~t~~~~~i 248 (281)
=+||+++-...+.+-+|+.... ... +.++.+|+ +++..+. .... |..+|.+|++....
T Consensus 298 ~~V~VID~~t~~vv~~i~~g~~------p~~-i~~s~Dg~~~l~v~~~----~~~~-V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQISLGHD------VDA-ISVAQDGGPDLYALSA----GTEV-LHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEECCCCEEEEEEECCCC------cCe-EEECCCCCeEEEEEcC----CCCe-EEEEECCCCCEEee
Confidence 3688888777888778765542 223 66678888 6666531 2454 99999999886654
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=33.32 E-value=2e+02 Score=23.57 Aligned_cols=65 Identities=11% Similarity=0.181 Sum_probs=39.1
Q ss_pred CeEEEEEecCCCCCeEEEEEEcC--CceeeEEEecCCCCcCccceeeeEEEEecC---CcEEEEecCCCCCCCCcEEEEE
Q 041236 164 GCLGLIHCHARRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSLYLAPVFFYSGA---GEVLLHENDTYPSHGKDVFYLY 238 (281)
Q Consensus 164 g~L~~~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~---g~ill~~~~~~~~~~~~~l~~Y 238 (281)
+.+.+.... ...+.||-+.. ..|.....+..... ...- +....+ +.+++... .++. +..|
T Consensus 172 ~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~h~~-----~v~~-~~~sp~~~~~~~l~s~~-----~dg~-i~iw 236 (379)
T 3jrp_A 172 SRKFVTGGA---DNLVKIWKYNSDAQTYVLESTLEGHSD-----WVRD-VAWSPTVLLRSYLASVS-----QDRT-CIIW 236 (379)
T ss_dssp TCEEEEEET---TSCEEEEEEETTTTEEEEEEEECCCSS-----CEEE-EEECCCCSSSEEEEEEE-----TTSC-EEEE
T ss_pred CCEEEEEeC---CCeEEEEEecCCCcceeeEEEEecccC-----cEeE-EEECCCCCCCCeEEEEe-----CCCE-EEEE
Confidence 555443333 57899999976 55776666543221 2333 555566 66665552 4454 8888
Q ss_pred ECCCC
Q 041236 239 SLEKK 243 (281)
Q Consensus 239 d~~t~ 243 (281)
|++++
T Consensus 237 d~~~~ 241 (379)
T 3jrp_A 237 TQDNE 241 (379)
T ss_dssp EESST
T ss_pred eCCCC
Confidence 88876
No 46
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=32.76 E-value=3.3e+02 Score=25.91 Aligned_cols=114 Identities=7% Similarity=0.031 Sum_probs=60.3
Q ss_pred ceEEeeeccCCcCceEEEEEECCCCeEEEEeCCCC---cCCCCeeEEEEe-CCeEEEEEecCCCCCeEEEEEEcCCceee
Q 041236 116 RIHDTKERFRTIFSSVILCFSLVDDKFRVILLPDD---VAKGAEFDLFDF-GGCLGLIHCHARRRAHVDIWTRNELNWIK 191 (281)
Q Consensus 116 G~yWl~~~~~~~~~~~IlsFD~~~e~f~~i~lP~~---~~~~~~~~L~~~-~g~L~~~~~~~~~~~~i~IWvL~~~~W~~ 191 (281)
|.-|+.... ..|..+|..++.|..+..... .....-..+.+- +|.|.+... ...+..|-.+...+..
T Consensus 321 g~lWigt~~-----~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~----~~Gl~~~~~~~~~~~~ 391 (795)
T 4a2l_A 321 GGMWLGTYF-----GGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTN----DGGLNLYNPITQRFTS 391 (795)
T ss_dssp SCEEEEESS-----SCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEES----SSCEEEECTTTCCEEE
T ss_pred cCEEEEECC-----CCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEEC----CCCeEEEcCCCCcEEE
Confidence 336766532 358888888888887743221 111122344443 366766432 2233333222233433
Q ss_pred EEEecC---C-CCcCccceeeeEEEEecCCc-EEEEecCCCCCCCCcEEEEEECCCCeEEEEE
Q 041236 192 IMCIPR---L-EDVHSSLYLAPVFFYSGAGE-VLLHENDTYPSHGKDVFYLYSLEKKIFRKFK 249 (281)
Q Consensus 192 ~~~i~~---~-~~~~~~~~~~~~~~~~~~g~-ill~~~~~~~~~~~~~l~~Yd~~t~~~~~i~ 249 (281)
.. .+. . ... ...+.. ++.+.+|. |++.. .... |..||+++++++.+.
T Consensus 392 ~~-~~~~~~~~~l~--~~~v~~-i~~d~~g~~lWigt------~~~G-l~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 392 YT-LQEDESARGIG--SNNIKA-VYVDEKKSLVYIGT------HAGG-LSILHRNSGQVENFN 443 (795)
T ss_dssp EC-CC------CCS--CSCEEE-EEEETTTTEEEEEE------TTTE-EEEEETTTCCEEEEC
T ss_pred Ee-cCCCCcccCCC--CccEEE-EEEcCCCCEEEEEe------CcCc-eeEEeCCCCcEEEee
Confidence 21 111 0 010 123444 56677888 88887 5455 999999999887763
No 47
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.65 E-value=32 Score=22.90 Aligned_cols=22 Identities=18% Similarity=0.133 Sum_probs=17.7
Q ss_pred CcceEEEEcCcCccceecCCCc
Q 041236 36 GEADLVLWNPWTGRYKTVPISV 57 (281)
Q Consensus 36 ~~~~~~V~NP~Tr~~~~LP~~~ 57 (281)
.++..|.+||.|++...--|..
T Consensus 28 ~dGR~fyyN~~Tk~S~WekP~e 49 (73)
T 2dk7_A 28 GDERVFFYNPTTRLSMWDRPDD 49 (73)
T ss_dssp SSSCEEEEETTTTEECSSCCTT
T ss_pred CCCCEEEecCcccceeccCChH
Confidence 5789999999999988774443
No 48
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=32.57 E-value=76 Score=23.41 Aligned_cols=53 Identities=15% Similarity=0.276 Sum_probs=31.6
Q ss_pred cceEEEEcCcCccceecCCCccCCCcceeccCccccccee--e---eCCCCceEEEEEEeCCC--CcEEEEE
Q 041236 37 EADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFC--F---DQSTNDYKIVRLVNDDG--ITHFQIY 101 (281)
Q Consensus 37 ~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~--~---d~~~~~yKVv~~~~~~~--~~~~eVy 101 (281)
...+++.+|.|+.|. |...... .++.++ + |...+.|+|+.....++ ..+|++|
T Consensus 19 ~A~Vm~~D~~~~~W~--p~~~g~l----------s~v~v~~~~~~~d~~~~~yrI~~~~l~d~~vv~~~~l~ 78 (126)
T 2jp2_A 19 KAVVMTRDDSSGGWF--PQEGGGI----------SRVGVCKVMHPEGNGRSGFLIHGERQKDKLVVLECYVR 78 (126)
T ss_dssp EEEEEEECTTSSSSE--ECSCCSC----------EEEEEECCBCTTCSSCBCEEEEEEESSSSCEEEEEEES
T ss_pred EEEEeeEcCCCCCEe--eCCCCCc----------ccEEEEEecCCCCCCCCEEEEEEEEcCCCeEEEEEEEe
Confidence 457899999998774 4433211 011111 3 55678899998875443 4556664
No 49
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=29.84 E-value=1.4e+02 Score=26.49 Aligned_cols=122 Identities=10% Similarity=-0.033 Sum_probs=68.4
Q ss_pred cce-EEeeeccCCcCceEEEEEECCCCeEEEE---eC-C-----CCcCCCCeeEEEEe--CCeEEE-EEecC---CCCCe
Q 041236 115 DRI-HDTKERFRTIFSSVILCFSLVDDKFRVI---LL-P-----DDVAKGAEFDLFDF--GGCLGL-IHCHA---RRRAH 178 (281)
Q Consensus 115 nG~-yWl~~~~~~~~~~~IlsFD~~~e~f~~i---~l-P-----~~~~~~~~~~L~~~--~g~L~~-~~~~~---~~~~~ 178 (281)
+|. +|.... ..+..+|+.++.-..+ .+ . .....+....+..- +++|++ ..... .....
T Consensus 237 dG~~~~vs~~------g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 237 AGRLVWPTYT------GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp TTEEEEEBTT------SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred CCcEEEEeCC------CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 677 776552 3588899987753322 21 0 00000011123333 477777 33211 01245
Q ss_pred EEEEEEcCCceeeEEEecCCCCcCccceeeeEEEEecCCc-EEEEecCCCCCCCCcEEEEEECCCCeEE-EEEEecCC
Q 041236 179 VDIWTRNELNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGE-VLLHENDTYPSHGKDVFYLYSLEKKIFR-KFKIEGME 254 (281)
Q Consensus 179 i~IWvL~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~-ill~~~~~~~~~~~~~l~~Yd~~t~~~~-~i~~~~~~ 254 (281)
=+||+++-..++.+.+|+.... ... +.++.||+ .|+..+. ..+. +..||..|++.. .+...+.+
T Consensus 311 ~~V~viD~~t~kv~~~i~vg~~------~~~-lavs~D~~~~ly~tn~----~~~~-VsViD~~t~k~~~~i~~~~~p 376 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMGHE------IDS-INVSQDEKPLLYALST----GDKT-LYIHDAESGEELRSVNQLGHG 376 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEEEE------ECE-EEECSSSSCEEEEEET----TTTE-EEEEETTTCCEEEEECCCCSS
T ss_pred CEEEEEECCCCeEEEEEECCCC------cce-EEECCCCCeEEEEEcC----CCCe-EEEEECCCCcEEEEecCCCCC
Confidence 7899999888888888776531 223 66788886 5555421 3565 999999988754 44444443
No 50
>1rmk_A MU-O-conotoxin mrvib; beta sheet, cystine knot; NMR {Conus marmoreus} SCOP: g.3.6.1
Probab=29.23 E-value=8.6 Score=20.68 Aligned_cols=13 Identities=38% Similarity=1.045 Sum_probs=10.2
Q ss_pred eEEEeecCeEeee
Q 041236 16 QLIGCCNGLLCIV 28 (281)
Q Consensus 16 ~i~~scnGLlcl~ 28 (281)
-++-+|.||+|+.
T Consensus 15 G~i~CC~GLIC~~ 27 (31)
T 1rmk_A 15 GFVYCCPGLICGP 27 (31)
T ss_dssp CCCEESTTCCBCS
T ss_pred EEEEecCCceEee
Confidence 3577999999964
No 51
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=26.95 E-value=2.4e+02 Score=22.54 Aligned_cols=100 Identities=5% Similarity=-0.089 Sum_probs=56.7
Q ss_pred eEEEEEECCCCeEEEEeCCCCcCCCCeeEEEEe-CCeEEEEEecCCCCCeEEEEEEcC-Cce-eeEEEecCCCCcCccce
Q 041236 130 SVILCFSLVDDKFRVILLPDDVAKGAEFDLFDF-GGCLGLIHCHARRRAHVDIWTRNE-LNW-IKIMCIPRLEDVHSSLY 206 (281)
Q Consensus 130 ~~IlsFD~~~e~f~~i~lP~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~~i~IWvL~~-~~W-~~~~~i~~~~~~~~~~~ 206 (281)
..|..+|.. .++..+.-... ....+... +|++.+.... ...+.+|-++. ... .....+.... ..
T Consensus 153 ~~l~~~~~~-g~~~~~~~~~~----~~~gi~~s~dg~~lv~~~~---~~~i~~~~~~~~g~~~~~~~~~~~~~-----~~ 219 (296)
T 3e5z_A 153 RWVFRLAPD-GTLSAPIRDRV----KPNGLAFLPSGNLLVSDTG---DNATHRYCLNARGETEYQGVHFTVEP-----GK 219 (296)
T ss_dssp CEEEEECTT-SCEEEEECCCS----SEEEEEECTTSCEEEEETT---TTEEEEEEECSSSCEEEEEEEECCSS-----SC
T ss_pred cEEEEECCC-CCEEEeecCCC----CCccEEECCCCCEEEEeCC---CCeEEEEEECCCCcCcCCCeEeeCCC-----CC
Confidence 478899987 55655422111 11233333 3554443332 57788888764 555 3322331111 12
Q ss_pred eeeEEEEecCCcEEEEecCCCCCCCCcEEEEEECCCCeEEEEEEe
Q 041236 207 LAPVFFYSGAGEVLLHENDTYPSHGKDVFYLYSLEKKIFRKFKIE 251 (281)
Q Consensus 207 ~~~~~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~t~~~~~i~~~ 251 (281)
..- ++++.+|.|++.. . .. |..||++.+.++.+...
T Consensus 220 p~~-i~~d~~G~l~v~~------~-~~-v~~~~~~g~~~~~~~~~ 255 (296)
T 3e5z_A 220 TDG-LRVDAGGLIWASA------G-DG-VHVLTPDGDELGRVLTP 255 (296)
T ss_dssp CCS-EEEBTTSCEEEEE------T-TE-EEEECTTSCEEEEEECS
T ss_pred CCe-EEECCCCCEEEEc------C-Ce-EEEECCCCCEEEEEECC
Confidence 334 6678899988777 3 44 99999998877777544
No 52
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=26.27 E-value=3.1e+02 Score=23.60 Aligned_cols=176 Identities=11% Similarity=0.060 Sum_probs=84.2
Q ss_pred ceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCCCCceEEEEEEeCCCCcEEEEEEcCCCCccc-------
Q 041236 38 ADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQSTNDYKIVRLVNDDGITHFQIYSLNTNFWKT------- 110 (281)
Q Consensus 38 ~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~~~yKVv~~~~~~~~~~~eVys~~~~~Wr~------- 110 (281)
..+++||..|++.+.+...... .... ++.|..+ +++.....++...+.++++.++..+.
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~----~~~~--------~~spdg~--~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~ 268 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRH----NGAP--------AFSPDGS--KLAFALSKTGSLNLYVMDLASGQIRQVTDGRSN 268 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSC----EEEE--------EECTTSS--EEEEEECTTSSCEEEEEETTTCCEEECCCCSSC
T ss_pred cEEEEEECCCCcEEEeecCCCc----ccCE--------EEcCCCC--EEEEEEecCCCceEEEEECCCCCEEeCcCCCCc
Confidence 5899999999988776433211 1122 2555322 23323333445566677776654433
Q ss_pred ----cccccce-EEeeeccCCcCceEEEEEECCCCeEEEEeCCCCcCCCCeeEEEEe-CCe-EEEEEecCCCCCeEEEEE
Q 041236 111 ----GILPDRI-HDTKERFRTIFSSVILCFSLVDDKFRVILLPDDVAKGAEFDLFDF-GGC-LGLIHCHARRRAHVDIWT 183 (281)
Q Consensus 111 ----~v~~nG~-yWl~~~~~~~~~~~IlsFD~~~e~f~~i~lP~~~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~i~IWv 183 (281)
...-+|. -....... ....|..+|+.+.+...+..... ....+.-. +|+ |++..... +...+.+|-
T Consensus 269 ~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~spdG~~l~~~~~~~-g~~~i~~~d 341 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGAPQRITWEGS----QNQDADVSSDGKFMVMVSSNG-GQQHIAKQD 341 (415)
T ss_dssp EEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCCEECCCSSS----EEEEEEECTTSSEEEEEEECS-SCEEEEEEE
T ss_pred ccceEECCCCCEEEEEECCC--CCcEEEEEECCCCCEEEEecCCC----cccCeEECCCCCEEEEEECcC-CceEEEEEE
Confidence 1122444 21122111 23467888888776544322211 11222222 354 44433220 133455555
Q ss_pred EcCCceeeEEEecCCCCcCccceeeeEEEEecCCcEEEEecCCCCCCCC-cEEEEEECCCCeEEEE
Q 041236 184 RNELNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYPSHGK-DVFYLYSLEKKIFRKF 248 (281)
Q Consensus 184 L~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~~-~~l~~Yd~~t~~~~~i 248 (281)
++..... .+.... .... +....+|+.++.... ... ..|+.+|++++..+.+
T Consensus 342 ~~~~~~~---~l~~~~------~~~~-~~~spdg~~l~~~s~----~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 342 LATGGVQ---VLSSTF------LDET-PSLAPNGTMVIYSSS----QGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp TTTCCEE---ECCCSS------SCEE-EEECTTSSEEEEEEE----ETTEEEEEEEETTSCCEEEC
T ss_pred CCCCCEE---EecCCC------CcCC-eEEcCCCCEEEEEEc----CCCccEEEEEECCCCcEEEe
Confidence 4433332 221111 2223 455678875544311 121 1399999998888877
No 53
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=25.42 E-value=67 Score=23.35 Aligned_cols=53 Identities=11% Similarity=0.127 Sum_probs=27.2
Q ss_pred cceEEEEcCcCccceecCCCccCCCcceeccCcccccceee-----eCCCCceEEEEEEeCCC--CcEEEEE
Q 041236 37 EADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCF-----DQSTNDYKIVRLVNDDG--ITHFQIY 101 (281)
Q Consensus 37 ~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~-----d~~~~~yKVv~~~~~~~--~~~~eVy 101 (281)
...++..+|.|+.|. |...... .++.+++ |...+.|+|+.....+. ..+|++|
T Consensus 10 ~A~V~~~d~~~~~W~--p~~~g~l----------s~v~i~~~~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~ 69 (118)
T 1xod_A 10 RAVVMTRDDSSGGWL--QLGGGGL----------SSVTVSKTLQPGDSGGTEFLVHGERLRDKTVVLECVLR 69 (118)
T ss_dssp EEEEEEECSSSSCEE--EGGGCCC----------EEEEEECC---------CCEEEEEETTTCCEEEEEECC
T ss_pred EEEEeeEcCCCCCEe--eCCCCCc----------ccEEEEEecCcCCCCCCEEEEEEEECCCCeEEEEEEEe
Confidence 357899999999764 4433211 1111123 55667899998764332 4445543
No 54
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=24.85 E-value=3e+02 Score=22.80 Aligned_cols=53 Identities=11% Similarity=0.275 Sum_probs=31.1
Q ss_pred CCeEEEEEEcCCceeeEEEecCCCCcCccceeeeEEEEecCCcEEEEecCCCCCCCCcEEEEEEC
Q 041236 176 RAHVDIWTRNELNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYPSHGKDVFYLYSL 240 (281)
Q Consensus 176 ~~~i~IWvL~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~ 240 (281)
+..+.||-++...|.....+.-... .+.- +....+|+.|+... .++. +..||.
T Consensus 171 d~~i~~w~~~~~~~~~~~~~~~h~~-----~v~~-l~~sp~g~~l~s~s-----~D~~-v~iW~~ 223 (345)
T 3fm0_A 171 DDTVKLYREEEDDWVCCATLEGHES-----TVWS-LAFDPSGQRLASCS-----DDRT-VRIWRQ 223 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSS-----CEEE-EEECTTSSEEEEEE-----TTSC-EEEEEE
T ss_pred CCcEEEEEecCCCEEEEEEecCCCC-----ceEE-EEECCCCCEEEEEe-----CCCe-EEEecc
Confidence 6789999988777776655532211 2333 55566776555542 3443 666664
No 55
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=22.94 E-value=3.3e+02 Score=22.69 Aligned_cols=95 Identities=8% Similarity=-0.046 Sum_probs=58.6
Q ss_pred EEEEECCCCeE-EEEeCCCCcCCCCeeEEEEeCCeEEEEEecCCCCCeEEEEEEcCCceeeEEEecCCCCcCccceeeeE
Q 041236 132 ILCFSLVDDKF-RVILLPDDVAKGAEFDLFDFGGCLGLIHCHARRRAHVDIWTRNELNWIKIMCIPRLEDVHSSLYLAPV 210 (281)
Q Consensus 132 IlsFD~~~e~f-~~i~lP~~~~~~~~~~L~~~~g~L~~~~~~~~~~~~i~IWvL~~~~W~~~~~i~~~~~~~~~~~~~~~ 210 (281)
|..+|+++.+- +.+ +|+.. ....+...+++|...... .. .+|+.+-..-+.+-+|+.... +
T Consensus 77 v~~iD~~Tgkv~~~~-l~~~~---FgeGit~~g~~Ly~ltw~---~~--~v~V~D~~Tl~~~~ti~~~~e--------G- 138 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLGNI---FAEGLASDGERLYQLTWT---EG--LLFTWSGMPPQRERTTRYSGE--------G- 138 (268)
T ss_dssp EEECCSSCSSCSEEE-ECTTC---CEEEEEECSSCEEEEESS---SC--EEEEEETTTTEEEEEEECSSC--------C-
T ss_pred EEEEECCCCcEEeEE-CCCCc---ceeEEEEeCCEEEEEEcc---CC--EEEEEECCcCcEEEEEeCCCc--------e-
Confidence 99999999855 556 77543 234466778888775432 22 467777666666667665421 1
Q ss_pred EEEecCCcEEEEecCCCCCCCCcEEEEEECCCCe-EEEEEE
Q 041236 211 FFYSGAGEVLLHENDTYPSHGKDVFYLYSLEKKI-FRKFKI 250 (281)
Q Consensus 211 ~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~t~~-~~~i~~ 250 (281)
.++..+|+.|+..+ ...+ +...|++|.+ .+.|..
T Consensus 139 wGLt~Dg~~L~vSd-----Gs~~-l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 139 WGLCYWNGKLVRSD-----GGTM-LTFHEPDGFALVGAVQV 173 (268)
T ss_dssp CCEEEETTEEEEEC-----SSSE-EEEECTTTCCEEEEEEC
T ss_pred eEEecCCCEEEEEC-----CCCE-EEEEcCCCCeEEEEEEe
Confidence 33344555555542 4455 9999999865 445544
No 56
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=22.75 E-value=2.8e+02 Score=21.78 Aligned_cols=189 Identities=12% Similarity=0.032 Sum_probs=91.5
Q ss_pred eEEEeecCeEeeeeeeccccCcceEEEEcCcCccceecCCCccCCCcceeccCcccccceeeeCCCC-------ceEEEE
Q 041236 16 QLIGCCNGLLCIVVQIHEHAGEADLVLWNPWTGRYKTVPISVVGLTLDMYGFGYINTFGFCFDQSTN-------DYKIVR 88 (281)
Q Consensus 16 ~i~~scnGLlcl~~~~~~~~~~~~~~V~NP~Tr~~~~LP~~~~~~~~~~~g~g~~~~~~l~~d~~~~-------~yKVv~ 88 (281)
.+.-..+|-+.+... ..+.+.++||. ++...++.+.... ...++ +.|+... .-+|.+
T Consensus 24 ~i~~d~~g~l~v~~~-----~~~~v~~~~~~-~~~~~~~~~~~~~--~~~~i--------~~~~~g~l~v~~~~~~~v~~ 87 (300)
T 2qc5_A 24 GITSSEDGKVWFTQH-----KANKISSLDQS-GRIKEFEVPTPDA--KVMCL--------IVSSLGDIWFTENGANKIGK 87 (300)
T ss_dssp EEEECTTSCEEEEET-----TTTEEEEECTT-SCEEEEECSSTTC--CEEEE--------EECTTSCEEEEETTTTEEEE
T ss_pred eeeECCCCCEEEEcC-----CCCeEEEECCC-CceEEEECCCCCC--cceeE--------EECCCCCEEEEecCCCeEEE
Confidence 666667887777662 35789999999 7776654332100 01111 2343211 112222
Q ss_pred EEeCCCCcEEEEEEcCCCCccc-cccc--cceEEeeeccCCcCceEEEEEECCCCeEEEEeCCCCcCCCCeeEEEEe-CC
Q 041236 89 LVNDDGITHFQIYSLNTNFWKT-GILP--DRIHDTKERFRTIFSSVILCFSLVDDKFRVILLPDDVAKGAEFDLFDF-GG 164 (281)
Q Consensus 89 ~~~~~~~~~~eVys~~~~~Wr~-~v~~--nG~yWl~~~~~~~~~~~IlsFD~~~e~f~~i~lP~~~~~~~~~~L~~~-~g 164 (281)
+.. ++ ....+......-.. ++.+ +|..|++.. ....|..+|.. .++..+.+|.... .-..+..- +|
T Consensus 88 ~d~-~g--~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~----~~~~i~~~~~~-g~~~~~~~~~~~~--~~~~i~~d~~g 157 (300)
T 2qc5_A 88 LSK-KG--GFTEYPLPQPDSGPYGITEGLNGDIWFTQL----NGDRIGKLTAD-GTIYEYDLPNKGS--YPAFITLGSDN 157 (300)
T ss_dssp ECT-TS--CEEEEECSSTTCCEEEEEECSTTCEEEEET----TTTEEEEECTT-SCEEEEECSSTTC--CEEEEEECTTS
T ss_pred ECC-CC--CeEEecCCCCCCCCccceECCCCCEEEEcc----CCCeEEEECCC-CCEEEccCCCCCC--CceeEEECCCC
Confidence 211 11 11222222111001 2332 455455442 13468999998 7777776664221 22344443 47
Q ss_pred eEEEEEecCCCCCeEEEEEEcC-CceeeEEEecCCCCcCccceeeeEEEEecCCcEEEEecCCCCCCCCcEEEEEECCCC
Q 041236 165 CLGLIHCHARRRAHVDIWTRNE-LNWIKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYPSHGKDVFYLYSLEKK 243 (281)
Q Consensus 165 ~L~~~~~~~~~~~~i~IWvL~~-~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~t~ 243 (281)
.|.+.... ... |++++. ..... +.++.. ...... +.++.+|.|++... .... +..||+ ++
T Consensus 158 ~l~v~~~~---~~~--i~~~~~~g~~~~-~~~~~~-----~~~~~~-i~~d~~g~l~v~~~-----~~~~-i~~~~~-~g 218 (300)
T 2qc5_A 158 ALWFTENQ---NNS--IGRITNTGKLEE-YPLPTN-----AAAPVG-ITSGNDGALWFVEI-----MGNK-IGRITT-TG 218 (300)
T ss_dssp SEEEEETT---TTE--EEEECTTCCEEE-EECSST-----TCCEEE-EEECTTSSEEEEET-----TTTE-EEEECT-TC
T ss_pred CEEEEecC---CCe--EEEECCCCcEEE-eeCCCC-----CCCcce-EEECCCCCEEEEcc-----CCCE-EEEEcC-CC
Confidence 76664432 233 444443 33332 222111 112333 55677888888762 3344 889998 66
Q ss_pred eEEEEE
Q 041236 244 IFRKFK 249 (281)
Q Consensus 244 ~~~~i~ 249 (281)
++..+.
T Consensus 219 ~~~~~~ 224 (300)
T 2qc5_A 219 EISEYD 224 (300)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 666553
No 57
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=22.39 E-value=3.1e+02 Score=22.20 Aligned_cols=119 Identities=12% Similarity=0.108 Sum_probs=58.9
Q ss_pred ccce-EEeeeccCCcCceEEEEEECCCCeEEEEeCCCCcCCCCeeEEEEe-CCeEEEEEecCCCCCeEEEEEEcC--Cce
Q 041236 114 PDRI-HDTKERFRTIFSSVILCFSLVDDKFRVILLPDDVAKGAEFDLFDF-GGCLGLIHCHARRRAHVDIWTRNE--LNW 189 (281)
Q Consensus 114 ~nG~-yWl~~~~~~~~~~~IlsFD~~~e~f~~i~lP~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~~i~IWvL~~--~~W 189 (281)
-+|. ||... ....|..+|..+.++..+..+... .-..+... +|.|.+..... ....-.|++++. ..-
T Consensus 54 ~~g~l~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~---~~~~i~~~~dg~l~v~~~~~-~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 54 RQGQLFLLDV-----FEGNIFKINPETKEIKRPFVSHKA---NPAAIKIHKDGRLFVCYLGD-FKSTGGIFAATENGDNL 124 (333)
T ss_dssp TTSCEEEEET-----TTCEEEEECTTTCCEEEEEECSSS---SEEEEEECTTSCEEEEECTT-SSSCCEEEEECTTSCSC
T ss_pred CCCCEEEEEC-----CCCEEEEEeCCCCcEEEEeeCCCC---CcceEEECCCCcEEEEeCCC-CCCCceEEEEeCCCCEE
Confidence 3566 65443 234688899998887765422111 12344443 47777644321 011124555543 221
Q ss_pred eeEEEecCCCCcCccceeeeEEEEecCCcEEEEecCCCC-CCCCcEEEEEECCCCeEEEE
Q 041236 190 IKIMCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYP-SHGKDVFYLYSLEKKIFRKF 248 (281)
Q Consensus 190 ~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~-~~~~~~l~~Yd~~t~~~~~i 248 (281)
... +..... ...... +.++.+|++++....... ..... |+.+|+++++++.+
T Consensus 125 ~~~--~~~~~~---~~~~~~-i~~d~~g~l~v~~~~~~~~~~~~~-l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 125 QDI--IEDLST---AYCIDD-MVFDSKGGFYFTDFRGYSTNPLGG-VYYVSPDFRTVTPI 177 (333)
T ss_dssp EEE--ECSSSS---CCCEEE-EEECTTSCEEEEECCCBTTBCCEE-EEEECTTSCCEEEE
T ss_pred EEE--EccCcc---CCcccc-eEECCCCCEEEEeccccccCCCce-EEEEeCCCCEEEEe
Confidence 111 111110 112344 566778888877621000 00244 88899988777665
No 58
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=21.96 E-value=3.4e+02 Score=22.42 Aligned_cols=105 Identities=11% Similarity=-0.034 Sum_probs=54.5
Q ss_pred eEEEEEECCCCeEE-EEeCCCCcCCCCeeEEEEe-CCeEEEEEecCCCCCeEEEEEEcC--CceeeEEEecCCCCcCccc
Q 041236 130 SVILCFSLVDDKFR-VILLPDDVAKGAEFDLFDF-GGCLGLIHCHARRRAHVDIWTRNE--LNWIKIMCIPRLEDVHSSL 205 (281)
Q Consensus 130 ~~IlsFD~~~e~f~-~i~lP~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~~i~IWvL~~--~~W~~~~~i~~~~~~~~~~ 205 (281)
..|..+|.++.+.. .+.+|.... -..|... +|...++.. . .||+++- ......-.++.. ..
T Consensus 203 ~~v~~id~~t~~v~~~~~~~~g~~---p~~la~~~d~~~lyv~~----~---~v~~~d~~t~~~~~~~~~~~~-----~~ 267 (328)
T 3dsm_A 203 PSLYRIDAETFTVEKQFKFKLGDW---PSEVQLNGTRDTLYWIN----N---DIWRMPVEADRVPVRPFLEFR-----DT 267 (328)
T ss_dssp CEEEEEETTTTEEEEEEECCTTCC---CEEEEECTTSCEEEEES----S---SEEEEETTCSSCCSSCSBCCC-----SS
T ss_pred ceEEEEECCCCeEEEEEecCCCCC---ceeEEEecCCCEEEEEc----c---EEEEEECCCCceeeeeeecCC-----CC
Confidence 67999999988764 567775321 2344444 244333221 2 5666654 111100000100 11
Q ss_pred eeeeEEEEec-CCcEEEEecCCCCCCCCcEEEEEECCCCeEEEEEEec
Q 041236 206 YLAPVFFYSG-AGEVLLHENDTYPSHGKDVFYLYSLEKKIFRKFKIEG 252 (281)
Q Consensus 206 ~~~~~~~~~~-~g~ill~~~~~~~~~~~~~l~~Yd~~t~~~~~i~~~~ 252 (281)
.... ++++. +|.|++....-|. .... |..||++.+.++.+....
T Consensus 268 ~p~g-i~vdp~~g~lyva~~~~y~-~~~~-V~v~d~~g~~~~~i~~G~ 312 (328)
T 3dsm_A 268 KYYG-LTVNPNNGEVYVADAIDYQ-QQGI-VYRYSPQGKLIDEFYVGI 312 (328)
T ss_dssp CEEE-EEECTTTCCEEEEECTTSS-SEEE-EEEECTTCCEEEEEEEEE
T ss_pred ceEE-EEEcCCCCeEEEEcccccc-cCCE-EEEECCCCCEEEEEEecc
Confidence 2333 56665 6677777511000 3454 999999977788876543
No 59
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=21.48 E-value=3.6e+02 Score=22.56 Aligned_cols=99 Identities=13% Similarity=0.114 Sum_probs=48.7
Q ss_pred eEEEEEECCCCe--EEEEeCCCCcCCCCeeEEEEeCCeEEEEEecCCCCCeEEEEEEcC-CceeeEEEecCCC-CcCccc
Q 041236 130 SVILCFSLVDDK--FRVILLPDDVAKGAEFDLFDFGGCLGLIHCHARRRAHVDIWTRNE-LNWIKIMCIPRLE-DVHSSL 205 (281)
Q Consensus 130 ~~IlsFD~~~e~--f~~i~lP~~~~~~~~~~L~~~~g~L~~~~~~~~~~~~i~IWvL~~-~~W~~~~~i~~~~-~~~~~~ 205 (281)
..|..+|+.+.. ...+...... .-..+....|.+.+.... ...+.||-+.+ ..-.....+.... ......
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~l~s~~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEGT---PINNVYFAAGALFVSSGF---DTSIKLDIISDPESERPAIEFETPTFLVSNDD 386 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTTS---CEEEEEEETTEEEEEETT---TEEEEEEEECCTTCCSCEECTTSCEEECCSSC
T ss_pred CeEEEEEcCCCcCchhhhhccCCC---CceEEEeCCCCEEEEecC---CccEEEEeccCCCCCccceeccCccEEccCCc
Confidence 568888988753 3444332111 122333345664444333 68999999987 2211111111110 001111
Q ss_pred eeeeEEEEecCCc----EEEEecCCCCCCCCcEEEEEECCC
Q 041236 206 YLAPVFFYSGAGE----VLLHENDTYPSHGKDVFYLYSLEK 242 (281)
Q Consensus 206 ~~~~~~~~~~~g~----ill~~~~~~~~~~~~~l~~Yd~~t 242 (281)
.... ++...+|+ ++..- .... +..|+++.
T Consensus 387 ~v~~-~~~s~~~~~~g~l~a~g------~~g~-~~~~~~~~ 419 (420)
T 3vl1_A 387 AVSQ-FCYVSDDESNGEVLEVG------KNNF-CALYNLSN 419 (420)
T ss_dssp CCCE-EEEECCSSSSCEEEEEE------TTTE-EEEEESCC
T ss_pred ceEE-EEEccCCCCcceEEEEc------CCce-EEEEeccC
Confidence 2333 55555665 55555 4454 88898865
No 60
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=21.12 E-value=3.2e+02 Score=21.87 Aligned_cols=97 Identities=9% Similarity=0.001 Sum_probs=46.4
Q ss_pred eEEEEEECCCCeE-EEEeCCCCcCCCCeeEEEEeC-CeEEEEEecCCCCCeEEEEEEcCCceeeEEEecCCC----CcCc
Q 041236 130 SVILCFSLVDDKF-RVILLPDDVAKGAEFDLFDFG-GCLGLIHCHARRRAHVDIWTRNELNWIKIMCIPRLE----DVHS 203 (281)
Q Consensus 130 ~~IlsFD~~~e~f-~~i~lP~~~~~~~~~~L~~~~-g~L~~~~~~~~~~~~i~IWvL~~~~W~~~~~i~~~~----~~~~ 203 (281)
..|..+|+.+.+. ..+..+.. -..+.... +.+..... ...+.||-++... ....+.... ....
T Consensus 237 g~i~iwd~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~~----d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~h 305 (340)
T 4aow_A 237 GQAMLWDLNEGKHLYTLDGGDI-----INALCFSPNRYWLCAAT----GPSIKIWDLEGKI--IVDELKQEVISTSSKAE 305 (340)
T ss_dssp CEEEEEETTTTEEEEEEECSSC-----EEEEEECSSSSEEEEEE----TTEEEEEETTTTE--EEEEECCC-------CC
T ss_pred CeEEEEEeccCceeeeecCCce-----EEeeecCCCCceeeccC----CCEEEEEECCCCe--EEEeccccceeeeccCC
Confidence 4577788877643 22232211 12222222 44433322 5678888776511 111111110 0000
Q ss_pred cceeeeEEEEecCCcEEEEecCCCCCCCCcEEEEEECCCCe
Q 041236 204 SLYLAPVFFYSGAGEVLLHENDTYPSHGKDVFYLYSLEKKI 244 (281)
Q Consensus 204 ~~~~~~~~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~t~~ 244 (281)
...+.- ++...+|+.|+.-. .++. +.+||++|++
T Consensus 306 ~~~v~~-l~~s~dg~~l~sgs-----~Dg~-v~iW~~~tGt 339 (340)
T 4aow_A 306 PPQCTS-LAWSADGQTLFAGY-----TDNL-VRVWQVTIGT 339 (340)
T ss_dssp CCCEEE-EEECTTSSEEEEEE-----TTSC-EEEEEEEC--
T ss_pred CCCEEE-EEECCCCCEEEEEe-----CCCE-EEEEeCCCcC
Confidence 112333 56678888776652 4565 9999999875
No 61
>3enb_A PRE-mRNA-processing-splicing factor 8; PRP8 domain IV, beta finger, RNAse H, spliceosome, U5-220K, mutation, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: c.55.3.14 PDB: 3lru_A
Probab=21.07 E-value=37 Score=27.36 Aligned_cols=15 Identities=27% Similarity=0.612 Sum_probs=13.0
Q ss_pred cceEEEEcCcCccce
Q 041236 37 EADLVLWNPWTGRYK 51 (281)
Q Consensus 37 ~~~~~V~NP~Tr~~~ 51 (281)
++.+++.||.|||..
T Consensus 36 NG~ifIfnP~TGqLf 50 (222)
T 3enb_A 36 NGAIFIFNPRTGQLF 50 (222)
T ss_dssp CEEEEEECTTTCEEE
T ss_pred cceEEEEeCCCCcEE
Confidence 678999999999865
No 62
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=20.98 E-value=3.5e+02 Score=22.24 Aligned_cols=99 Identities=12% Similarity=0.091 Sum_probs=45.5
Q ss_pred eEEEEEECCCCe----EEEEeCCCCcCCCCeeEEEEe-CCeEEEEEecCCCCCeEEEEEEcC---------CceeeE---
Q 041236 130 SVILCFSLVDDK----FRVILLPDDVAKGAEFDLFDF-GGCLGLIHCHARRRAHVDIWTRNE---------LNWIKI--- 192 (281)
Q Consensus 130 ~~IlsFD~~~e~----f~~i~lP~~~~~~~~~~L~~~-~g~L~~~~~~~~~~~~i~IWvL~~---------~~W~~~--- 192 (281)
..|..+|+.+++ ...+..|.. ..-..+.-. +|.+.+.... ...+.||-+.. ..|...
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 195 (377)
T 3dwl_C 122 RVISVCYFEQENDWWVSKHLKRPLR---STILSLDWHPNNVLLAAGCA---DRKAYVLSAYVRDVDAKPEASVWGSRLPF 195 (377)
T ss_dssp SCEEECCC-----CCCCEEECSSCC---SCEEEEEECTTSSEEEEEES---SSCEEEEEECCSSCC-CCCSCSSCSCCCE
T ss_pred CeEEEEEECCcccceeeeEeecccC---CCeEEEEEcCCCCEEEEEeC---CCEEEEEEEEecccCCCccccccccccch
Confidence 356677777664 344433211 112233333 3554443333 57899999853 223221
Q ss_pred --EEecCCCCcCccceeeeEEEEecCCcEEEEecCCCCCCCCcEEEEEECCCCeE
Q 041236 193 --MCIPRLEDVHSSLYLAPVFFYSGAGEVLLHENDTYPSHGKDVFYLYSLEKKIF 245 (281)
Q Consensus 193 --~~i~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~t~~~ 245 (281)
..... .. .....- +....+|+.++... .++. +..||+++++.
T Consensus 196 ~~~~~~~-~~---~~~v~~-~~~sp~~~~l~~~~-----~d~~-i~iwd~~~~~~ 239 (377)
T 3dwl_C 196 NTVCAEY-PS---GGWVHA-VGFSPSGNALAYAG-----HDSS-VTIAYPSAPEQ 239 (377)
T ss_dssp EEEEECC-CC---SSSEEE-EEECTTSSCEEEEE-----TTTE-EC-CEECSTTS
T ss_pred hhhhhcc-cC---CceEEE-EEECCCCCEEEEEe-----CCCc-EEEEECCCCCC
Confidence 11111 11 112333 55567777555442 4454 88888887763
No 63
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=20.67 E-value=3.4e+02 Score=21.92 Aligned_cols=31 Identities=10% Similarity=0.121 Sum_probs=20.9
Q ss_pred EEEecCCcEEEEecCCCCCCCCcEEEEEECCCCeEEE
Q 041236 211 FFYSGAGEVLLHENDTYPSHGKDVFYLYSLEKKIFRK 247 (281)
Q Consensus 211 ~~~~~~g~ill~~~~~~~~~~~~~l~~Yd~~t~~~~~ 247 (281)
+....+|+.++... .++. +..||+++++...
T Consensus 279 ~~~sp~~~~l~s~~-----~dg~-i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 279 IAFHPVHGTLATVG-----SDGR-FSFWDKDARTKLK 309 (368)
T ss_dssp EEECTTTCCEEEEE-----TTSC-EEEEETTTTEEEE
T ss_pred EEEecCCCEEEEEc-----cCCe-EEEEECCCCcEEE
Confidence 55567776655542 4565 9999999877544
Done!