BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041240
MALHYYNKKILRMLGQIFGRVFKTDYNTESASRDKFGRLAVEIDPNKPLISQFFLDGKLQ
KVEYEGLPNTSFLCGKYGHSKDICPNRTEEDHALGFQPHLDGANESVEMNSNL

High Scoring Gene Products

Symbol, full name Information P value
AT2G01050 protein from Arabidopsis thaliana 8.2e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041240
        (113 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2045756 - symbol:AT2G01050 species:3702 "Arabi...   141  8.2e-09   1


>TAIR|locus:2045756 [details] [associations]
            symbol:AT2G01050 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 SMART:SM00343 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0008270 GO:GO:0003676
            eggNOG:KOG1075 EMBL:AC006837 InterPro:IPR025558 InterPro:IPR025836
            Pfam:PF14111 Pfam:PF14392 IPI:IPI00537469 PIR:A84420
            RefSeq:NP_178215.1 UniGene:At.66149 PRIDE:Q9SJW1
            EnsemblPlants:AT2G01050.1 GeneID:814629 KEGG:ath:AT2G01050
            TAIR:At2g01050 InParanoid:Q9SJW1 PhylomeDB:Q9SJW1
            Genevestigator:Q9SJW1 Uniprot:Q9SJW1
        Length = 515

 Score = 141 (54.7 bits), Expect = 8.2e-09, P = 8.2e-09
 Identities = 33/109 (30%), Positives = 51/109 (46%)

Query:     4 HYYNKKILRMLGQIFGRVFKTDYNTESASRDKFGRLAVEIDPNKPLISQFFLDGKLQKVE 63
             +YY++ +L  + +  GR  K D NT +  + +F R+ +E++  KPL     ++G    V 
Sbjct:   176 NYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEVNLAKPLKGTVLINGDRYFVA 235

Query:    64 YEGLPNTSFLCGKYGHSKDICPNRTEEDHALGFQPHLDGANESVEMNSN 112
             YEGL      CG YGH    CP       + G +   D A   V M  +
Sbjct:   236 YEGLSKICSSCGIYGHLVHSCPRNVVVKVSAGAETVTDRAVVPVGMEGD 284


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.138   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      113       113   0.00091  102 3  11 22  0.48    30
                                                     29  0.44    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  548 (58 KB)
  Total size of DFA:  119 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.70u 0.16s 11.86t   Elapsed:  00:00:01
  Total cpu time:  11.70u 0.16s 11.86t   Elapsed:  00:00:01
  Start:  Fri May 10 04:25:24 2013   End:  Fri May 10 04:25:25 2013

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