BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041249
(789 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 127/246 (51%), Gaps = 29/246 (11%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRH 326
A+D FS+ N++G G FG VYKG L +G T V VK + F E + H
Sbjct: 36 ASDNFSNKNILGRGGFGKVYKGRLADG-TLVAVKRLKEERXQGGELQFQTEVEMISMAVH 94
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
RNL+++ C + LVY +M NGS+ L RE + P L+ +R
Sbjct: 95 RNLLRLRGFCMTPTE-----RLLVYPYMANGSVASCL----RERPESQPP--LDWPKRQR 143
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSS 444
IA+ A L YLH C P H D+K +NILLDEE + VGDFGLA+ + HV +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 202
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
V+G+IG+IAPEY + S DV+ YG+++LELI ++ D+ AR+A
Sbjct: 203 --VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL-----------ARLA 249
Query: 505 LPDHVM 510
D VM
Sbjct: 250 NDDDVM 255
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 122/245 (49%), Gaps = 27/245 (11%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR 327
A+D F + N++G G FG VYKG L +G ++ F E + HR
Sbjct: 28 ASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 87
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
NL+++ C + LVY +M NGS+ L RE + P L+ +R I
Sbjct: 88 NLLRLRGFCMTPTE-----RLLVYPYMANGSVASCL----RERPESQPP--LDWPKRQRI 136
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSI 445
A+ A L YLH C P H D+K +NILLDEE + VGDFGLA+ + HV +
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-- 194
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505
V+G IG+IAPEY + S DV+ YG+++LELI ++ D+ AR+A
Sbjct: 195 -VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL-----------ARLAN 242
Query: 506 PDHVM 510
D VM
Sbjct: 243 DDDVM 247
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 128/261 (49%), Gaps = 27/261 (10%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR 327
AT+ F LIG G FG VYKGVL +G V +K + F E L RH
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDG-AKVALKRRTPESSQGIEEFETEIETLSFCRHP 95
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
+LV + C + N+ L+Y++M+NG+L+ LY D +++ QRL I
Sbjct: 96 HLVSLIGFCD----ERNEM-ILIYKYMENGNLKRHLYGS------DLPTMSMSWEQRLEI 144
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF---LPPTHVQTSS 444
I A L YLH H D+K NILLDE V + DFG+++ L TH+
Sbjct: 145 CIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV- 200
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
VKG++GYI PEY + ++ DVYS+G+++ E++ + S I+ + N A A
Sbjct: 201 --VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR--SAIVQSLPREMVNLAEWA 256
Query: 505 LPDH----VMDIVDSTLLNDV 521
+ H + IVD L + +
Sbjct: 257 VESHNNGQLEQIVDPNLADKI 277
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 128/261 (49%), Gaps = 27/261 (10%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR 327
AT+ F LIG G FG VYKGVL +G V +K + F E L RH
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDG-AKVALKRRTPESSQGIEEFETEIETLSFCRHP 95
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
+LV + C + N+ L+Y++M+NG+L+ LY D +++ QRL I
Sbjct: 96 HLVSLIGFCD----ERNEM-ILIYKYMENGNLKRHLYGS------DLPTMSMSWEQRLEI 144
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF---LPPTHVQTSS 444
I A L YLH H D+K NILLDE V + DFG+++ L TH+
Sbjct: 145 CIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV- 200
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
VKG++GYI PEY + ++ DVYS+G+++ E++ + S I+ + N A A
Sbjct: 201 --VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR--SAIVQSLPREMVNLAEWA 256
Query: 505 LPDH----VMDIVDSTLLNDV 521
+ H + IVD L + +
Sbjct: 257 VESHNNGQLEQIVDPNLADKI 277
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 116/219 (52%), Gaps = 4/219 (1%)
Query: 553 KAQKVTILDLESLKLAGSILPHIGNLSF-LKILNLENNSFTHEIPSEIGRLRR--LQVPD 609
K + + +LDL + +G + + NLS L L+L +N+F+ I + + + LQ
Sbjct: 338 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 397
Query: 610 LNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPP 669
L NN G+IP LS+CS L+ + L+ N L G IPS GSLSK+ L L N L G IP
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 670 PLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFD 729
L + +L + L N+L G IP LS NL + L NRL+G +P I + ++A
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 517
Query: 730 VGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSI 768
+ N GNIP + G ++L + + TN G IP ++
Sbjct: 518 LSNNSFSGNIPAELG-DCRSLIWLDLNTNLFNGTIPAAM 555
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 125/283 (44%), Gaps = 56/283 (19%)
Query: 560 LDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEI 619
LD+ KL+G I + LK+LN+ +N F IP L+ LQ L N GEI
Sbjct: 225 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEI 282
Query: 620 PVNLS-SCSNLIRIGLAKNQLMGKIPSDFG-------------------------SLSKI 653
P LS +C L + L+ N G +P FG + +
Sbjct: 283 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL 342
Query: 654 EVLSLGFNNLIGSIPPPLGNLS---------------------------SLRKISLAINN 686
+VL L FN G +P L NLS +L+++ L N
Sbjct: 343 KVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNG 402
Query: 687 LAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFT 746
G IP TLS LV L+L N LSG +PSS+ ++S + + + N ++G IP + +
Sbjct: 403 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY- 461
Query: 747 LQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789
++ L+ + N +TG IP +SN + L NN+LTGE+P
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 123/240 (51%), Gaps = 5/240 (2%)
Query: 554 AQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSE-IGRLRRLQVPDLNN 612
+T LDL G++ P G+ S L+ L L +N+F+ E+P + + ++R L+V DL+
Sbjct: 290 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSF 349
Query: 613 NSIGGEIPVNLSSCS-NLIRIGLAKNQLMGKIPSDFGSLSK--IEVLSLGFNNLIGSIPP 669
N GE+P +L++ S +L+ + L+ N G I + K ++ L L N G IPP
Sbjct: 350 NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP 409
Query: 670 PLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFD 729
L N S L + L+ N L+G+IP +L L L L L +N L G +P + + ++
Sbjct: 410 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 469
Query: 730 VGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789
+ N + G IP NL + S+ NR+TG IP I L + + NN +G +P
Sbjct: 470 LDFNDLTGEIPSGLS-NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 2 LALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTI 61
L L +N +G IPP++ N +LV ++S N+L G+IPSSLG L + L+ N L G I
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 62 PPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEI 121
P +LM + +L L L N G P+ + N NL +++S N L GEIP +G
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR------ 509
Query: 122 LEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGVFKNASA 181
+ L IL LS N SG IP L + + L+L+ N G +P +FK +
Sbjct: 510 -------LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA-AMFKQSGK 561
Query: 182 ISV 184
I+
Sbjct: 562 IAA 564
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 126/288 (43%), Gaps = 26/288 (9%)
Query: 524 LAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPHIGNLSFLKI 583
L +S R ++ +N ++E I + K + ILD L G I + N + L
Sbjct: 435 LGSLSKLRDLKLWLN-MLEGEIPQELMYVKTLETLILDFN--DLTGEIPSGLSNCTNLNW 491
Query: 584 LNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKI 643
++L NN T EIP IGRL L + L+NNS G IP L C +LI + L N G I
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Query: 644 PSD-FGSLSKIEVLSL------------------GFNNLI---GSIPPPLGNLSSLRKIS 681
P+ F KI + G NL+ G L LS+ +
Sbjct: 552 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 611
Query: 682 LAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPL 741
+ G T +++ L + N LSG +P I ++ + ++G N I G+IP
Sbjct: 612 ITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 671
Query: 742 DYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789
+ G L+ L + +N++ G IP ++S + L NN L+G +P
Sbjct: 672 EVG-DLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 102/248 (41%), Gaps = 63/248 (25%)
Query: 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSL------------------- 41
IL L +N SGNIP +G+ + L+ ++ N G+IP+++
Sbjct: 515 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVY 574
Query: 42 ----GL---CESLTTIGLFN-------NNLS-------------GTIPPQLMGLTSLVAL 74
G+ C + F N LS G P S++ L
Sbjct: 575 IKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 634
Query: 75 DLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQGLTI 134
D+S N G P E+G++ L L + N + G IP +G +GL I
Sbjct: 635 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGD-------------LRGLNI 681
Query: 135 LDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGVFKNASAISVLGNNKLCGGI 194
LDLS NKL G IP+ + L ++ ++LS N+L G +P G F+ L N LCG
Sbjct: 682 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG-- 739
Query: 195 SEFKLPPC 202
+ LP C
Sbjct: 740 --YPLPRC 745
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 117/280 (41%), Gaps = 56/280 (20%)
Query: 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSL-GLCESLTTIGLFNNNLSG 59
+L + SN+ G IPP LK L +++N G IP L G C++LT + L N+ G
Sbjct: 248 LLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 305
Query: 60 TIPP-------------------------QLMGLTSLVALDLSRNQFRGSFPTEVGNL-I 93
+PP L+ + L LDLS N+F G P + NL
Sbjct: 306 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 365
Query: 94 NLETLTVSGNILQGEIPSTLGSCIK--LEILEMQGNVFQG-----------LTILDLSRN 140
+L TL +S N G I L K L+ L +Q N F G L L LS N
Sbjct: 366 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 425
Query: 141 KLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGVFKNASAISVLGNNKLCGGISEFKLP 200
LSG IP L L + +L L N LEG +P E ++ +L N L G I
Sbjct: 426 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEI------ 479
Query: 201 PCGLKKST--EW------RLTFELKLVIAIVSGLMGLALT 232
P GL T W RLT E+ I + L L L+
Sbjct: 480 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 519
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 113/244 (46%), Gaps = 15/244 (6%)
Query: 554 AQKVTILDLESLKLAGSI--LPHIGNLSFLKILNLENNSFTHEIPSEIG---RLRRLQVP 608
+ +T LDL L+G + L +G+ S LK LN+ +N T + P ++ +L L+V
Sbjct: 96 SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSN--TLDFPGKVSGGLKLNSLEVL 153
Query: 609 DLNNNSIGGEIPVNL---SSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIG 665
DL+ NSI G V C L + ++ N++ G + D +E L + NN
Sbjct: 154 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFST 211
Query: 666 SIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSI 725
IP LG+ S+L+ + ++ N L+G +S L +L + N+ G +P + S+
Sbjct: 212 GIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSL 268
Query: 726 AEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLT 785
+ ENK G IP L + N GA+PP + S LE +N +
Sbjct: 269 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFS 328
Query: 786 GEVP 789
GE+P
Sbjct: 329 GELP 332
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 21/208 (10%)
Query: 2 LALDSNRLSGNIPPS-IGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGT 60
LA+ N++SG++ S NL+ L VS N IP LG C +L + + N LSG
Sbjct: 180 LAISGNKISGDVDVSRCVNLEFLD---VSSNNFSTGIPF-LGDCSALQHLDISGNKLSGD 235
Query: 61 IPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTL-GSCIKL 119
+ T L L++S NQF G P L +L+ L+++ N GEIP L G+C L
Sbjct: 236 FSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTL 293
Query: 120 EILEMQGNVFQGLT-----------ILDLSRNKLSGEIP-EFLVGLKVIENLNLSYNDLE 167
L++ GN F G L LS N SGE+P + L+ ++ ++ L+LS+N+
Sbjct: 294 TGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFS 353
Query: 168 GMVPTEGVFKNASAISV-LGNNKLCGGI 194
G +P +AS +++ L +N G I
Sbjct: 354 GELPESLTNLSASLLTLDLSSNNFSGPI 381
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
Query: 69 TSLVALDLSRNQFRGSFP--TEVGNLINLETLTVSGNILQGEIPSTLGSCIK---LEILE 123
SL +LDLSRN G T +G+ L+ L VS N L + P + +K LE+L+
Sbjct: 97 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLD 154
Query: 124 MQGNVFQGLTI--------------LDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGM 169
+ N G + L +S NK+SG++ + +E L++S N+
Sbjct: 155 LSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTG 212
Query: 170 VPTEGVFKNASAISVLGNNKLCGGISE 196
+P G + + G NKL G S
Sbjct: 213 IPFLGDCSALQHLDISG-NKLSGDFSR 238
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 116/219 (52%), Gaps = 4/219 (1%)
Query: 553 KAQKVTILDLESLKLAGSILPHIGNLSF-LKILNLENNSFTHEIPSEIGRLRR--LQVPD 609
K + + +LDL + +G + + NLS L L+L +N+F+ I + + + LQ
Sbjct: 341 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400
Query: 610 LNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPP 669
L NN G+IP LS+CS L+ + L+ N L G IPS GSLSK+ L L N L G IP
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 670 PLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFD 729
L + +L + L N+L G IP LS NL + L NRL+G +P I + ++A
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520
Query: 730 VGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSI 768
+ N GNIP + G ++L + + TN G IP ++
Sbjct: 521 LSNNSFSGNIPAELG-DCRSLIWLDLNTNLFNGTIPAAM 558
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 125/283 (44%), Gaps = 56/283 (19%)
Query: 560 LDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEI 619
LD+ KL+G I + LK+LN+ +N F IP L+ LQ L N GEI
Sbjct: 228 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEI 285
Query: 620 PVNLS-SCSNLIRIGLAKNQLMGKIPSDFG-------------------------SLSKI 653
P LS +C L + L+ N G +P FG + +
Sbjct: 286 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL 345
Query: 654 EVLSLGFNNLIGSIPPPLGNLS---------------------------SLRKISLAINN 686
+VL L FN G +P L NLS +L+++ L N
Sbjct: 346 KVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNG 405
Query: 687 LAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFT 746
G IP TLS LV L+L N LSG +PSS+ ++S + + + N ++G IP + +
Sbjct: 406 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY- 464
Query: 747 LQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789
++ L+ + N +TG IP +SN + L NN+LTGE+P
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 123/240 (51%), Gaps = 5/240 (2%)
Query: 554 AQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSE-IGRLRRLQVPDLNN 612
+T LDL G++ P G+ S L+ L L +N+F+ E+P + + ++R L+V DL+
Sbjct: 293 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSF 352
Query: 613 NSIGGEIPVNLSSCS-NLIRIGLAKNQLMGKIPSDFGSLSK--IEVLSLGFNNLIGSIPP 669
N GE+P +L++ S +L+ + L+ N G I + K ++ L L N G IPP
Sbjct: 353 NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP 412
Query: 670 PLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFD 729
L N S L + L+ N L+G+IP +L L L L L +N L G +P + + ++
Sbjct: 413 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472
Query: 730 VGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789
+ N + G IP NL + S+ NR+TG IP I L + + NN +G +P
Sbjct: 473 LDFNDLTGEIPSGLS-NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 2 LALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTI 61
L L +N +G IPP++ N +LV ++S N+L G+IPSSLG L + L+ N L G I
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 62 PPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEI 121
P +LM + +L L L N G P+ + N NL +++S N L GEIP +G
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR------ 512
Query: 122 LEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGVFKNASA 181
+ L IL LS N SG IP L + + L+L+ N G +P +FK +
Sbjct: 513 -------LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA-AMFKQSGK 564
Query: 182 ISV 184
I+
Sbjct: 565 IAA 567
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 126/288 (43%), Gaps = 26/288 (9%)
Query: 524 LAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPHIGNLSFLKI 583
L +S R ++ +N ++E I + K + ILD L G I + N + L
Sbjct: 438 LGSLSKLRDLKLWLN-MLEGEIPQELMYVKTLETLILDFN--DLTGEIPSGLSNCTNLNW 494
Query: 584 LNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKI 643
++L NN T EIP IGRL L + L+NNS G IP L C +LI + L N G I
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 644 PSD-FGSLSKIEVLSL------------------GFNNLI---GSIPPPLGNLSSLRKIS 681
P+ F KI + G NL+ G L LS+ +
Sbjct: 555 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 614
Query: 682 LAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPL 741
+ G T +++ L + N LSG +P I ++ + ++G N I G+IP
Sbjct: 615 ITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 674
Query: 742 DYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789
+ G L+ L + +N++ G IP ++S + L NN L+G +P
Sbjct: 675 EVG-DLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 117/280 (41%), Gaps = 56/280 (20%)
Query: 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSL-GLCESLTTIGLFNNNLSG 59
+L + SN+ G IPP LK L +++N G IP L G C++LT + L N+ G
Sbjct: 251 LLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308
Query: 60 TIPP-------------------------QLMGLTSLVALDLSRNQFRGSFPTEVGNL-I 93
+PP L+ + L LDLS N+F G P + NL
Sbjct: 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
Query: 94 NLETLTVSGNILQGEIPSTLGSCIK--LEILEMQGNVFQG-----------LTILDLSRN 140
+L TL +S N G I L K L+ L +Q N F G L L LS N
Sbjct: 369 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 428
Query: 141 KLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGVFKNASAISVLGNNKLCGGISEFKLP 200
LSG IP L L + +L L N LEG +P E ++ +L N L G I
Sbjct: 429 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEI------ 482
Query: 201 PCGLKKST--EW------RLTFELKLVIAIVSGLMGLALT 232
P GL T W RLT E+ I + L L L+
Sbjct: 483 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 522
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 113/244 (46%), Gaps = 15/244 (6%)
Query: 554 AQKVTILDLESLKLAGSI--LPHIGNLSFLKILNLENNSFTHEIPSEIG---RLRRLQVP 608
+ +T LDL L+G + L +G+ S LK LN+ +N T + P ++ +L L+V
Sbjct: 99 SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSN--TLDFPGKVSGGLKLNSLEVL 156
Query: 609 DLNNNSIGGEIPVNL---SSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIG 665
DL+ NSI G V C L + ++ N++ G + D +E L + NN
Sbjct: 157 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFST 214
Query: 666 SIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSI 725
IP LG+ S+L+ + ++ N L+G +S L +L + N+ G +P + S+
Sbjct: 215 GIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSL 271
Query: 726 AEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLT 785
+ ENK G IP L + N GA+PP + S LE +N +
Sbjct: 272 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFS 331
Query: 786 GEVP 789
GE+P
Sbjct: 332 GELP 335
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 59 GTIPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIK 118
G P S++ LD+S N G P E+G++ L L + N + G IP +G
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGD--- 678
Query: 119 LEILEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGVFKN 178
+GL ILDLS NKL G IP+ + L ++ ++LS N+L G +P G F+
Sbjct: 679 ----------LRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFET 728
Query: 179 ASAISVLGNNKLCGGISEFKLPPC 202
L N LCG + LP C
Sbjct: 729 FPPAKFLNNPGLCG----YPLPRC 748
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 2 LALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTI 61
LA+ N++SG++ + L VS N IP LG C +L + + N LSG
Sbjct: 183 LAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDF 239
Query: 62 PPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTL-GSCIKLE 120
+ T L L++S NQF G P L +L+ L+++ N GEIP L G+C L
Sbjct: 240 SRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLT 297
Query: 121 ILEMQGNVFQGLT-----------ILDLSRNKLSGEIP-EFLVGLKVIENLNLSYNDLEG 168
L++ GN F G L LS N SGE+P + L+ ++ ++ L+LS+N+ G
Sbjct: 298 GLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSG 357
Query: 169 MVPTEGVFKNASAISV-LGNNKLCGGI 194
+P +AS +++ L +N G I
Sbjct: 358 ELPESLTNLSASLLTLDLSSNNFSGPI 384
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 55 NNLSGTIPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLG 114
N LSG IP ++ + L L+L N GS P EVG+L L L +S N L G IP +
Sbjct: 642 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701
Query: 115 SCIKLEILEMQGNVFQGLTILDLSRNKLSGEIPE 148
+ L M LT +DLS N LSG IPE
Sbjct: 702 A------LTM-------LTEIDLSNNNLSGPIPE 722
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGT 60
L + N LSG IP IG++ L + N + GSIP +G L + L +N L G
Sbjct: 636 FLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR 695
Query: 61 IPPQLMGLTSLVALDLSRNQFRGSFPTEVG 90
IP + LT L +DLS N G P E+G
Sbjct: 696 IPQAMSALTMLTEIDLSNNNLSGPIP-EMG 724
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%)
Query: 11 GNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTS 70
G+ P+ N ++ +S N L G IP +G L + L +N++SG+IP ++ L
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 681
Query: 71 LVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIP 110
L LDLS N+ G P + L L + +S N L G IP
Sbjct: 682 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
Query: 69 TSLVALDLSRNQFRGSFP--TEVGNLINLETLTVSGNILQGEIPSTLGSCIK---LEILE 123
SL +LDLSRN G T +G+ L+ L VS N L + P + +K LE+L+
Sbjct: 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLD 157
Query: 124 MQGNVFQGLTI--------------LDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGM 169
+ N G + L +S NK+SG++ + +E L++S N+
Sbjct: 158 LSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTG 215
Query: 170 VPTEGVFKNASAISVLGNNKLCGGISE 196
+P G + + G NKL G S
Sbjct: 216 IPFLGDCSALQHLDISG-NKLSGDFSR 241
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 108/210 (51%), Gaps = 22/210 (10%)
Query: 276 NLIGTGSFGSVYKGVLDEGRTTVTVK----VFNLHHHRASRSFIAECRALRSIRHRNLVK 331
N +G G FG VYKG ++ TTV VK + ++ + F E + + +H NLV+
Sbjct: 37 NKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ G G+D LVY +M NGSL ++R +D P L+ R IA
Sbjct: 95 LL----GFSSDGDDL-CLVYVYMPNGSL------LDRLSCLDGTPP-LSWHMRCKIAQGA 142
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSI 451
A+ +++LH + H D+K +NILLDE + + DFGLAR + G+
Sbjct: 143 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTT 199
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
Y+APE L E++ D+YS+G+++LE+I
Sbjct: 200 AYMAPE-ALRGEITPKSDIYSFGVVLLEII 228
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 108/210 (51%), Gaps = 22/210 (10%)
Query: 276 NLIGTGSFGSVYKGVLDEGRTTVTVK----VFNLHHHRASRSFIAECRALRSIRHRNLVK 331
N +G G FG VYKG ++ TTV VK + ++ + F E + + +H NLV+
Sbjct: 31 NKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 88
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ G G+D LVY +M NGSL ++R +D P L+ R IA
Sbjct: 89 LL----GFSSDGDDL-CLVYVYMPNGSL------LDRLSCLDGTPP-LSWHMRCKIAQGA 136
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSI 451
A+ +++LH + H D+K +NILLDE + + DFGLAR + G+
Sbjct: 137 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTT 193
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
Y+APE L E++ D+YS+G+++LE+I
Sbjct: 194 AYMAPE-ALRGEITPKSDIYSFGVVLLEII 222
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 108/210 (51%), Gaps = 22/210 (10%)
Query: 276 NLIGTGSFGSVYKGVLDEGRTTVTVK----VFNLHHHRASRSFIAECRALRSIRHRNLVK 331
N +G G FG VYKG ++ TTV VK + ++ + F E + + +H NLV+
Sbjct: 37 NKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ G G+D LVY +M NGSL ++R +D P L+ R IA
Sbjct: 95 LL----GFSSDGDDL-CLVYVYMPNGSL------LDRLSCLDGTPP-LSWHMRCKIAQGA 142
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSI 451
A+ +++LH + H D+K +NILLDE + + DFGLAR + G+
Sbjct: 143 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTT 199
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
Y+APE L E++ D+YS+G+++LE+I
Sbjct: 200 AYMAPE-ALRGEITPKSDIYSFGVVLLEII 228
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG GSFG+V++ V + + H F+ E ++ +RH N+V A +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Q + ++V E++ GSL L+ +++D+ +RL++A DVA ++Y
Sbjct: 105 ----QPPNL-SIVTEYLSRGSLYRLLHKSGAREQLDER-------RRLSMAYDVAKGMNY 152
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
LH+ PI H +LK N+L+D++ V DFGL+R T + SS G+ ++APE
Sbjct: 153 LHNRNPPIV-HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--SSKSAAGTPEWMAPE 209
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ DVYS+G+++ EL ++P
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 40/231 (17%)
Query: 7 NRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLM 66
N L G IPP+I L +L Y++ + G+IP L ++L T+ N LSGT+PP +
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 67 GLTSLVALDLSRNQFRGSFPTEVGNLINLET-LTVSGNILQGEIPSTLGSCIKLEILEMQ 125
L +LV + N+ G+ P G+ L T +T+S N L G+IP T + + L +++
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN-LNLAFVDLS 205
Query: 126 GNVFQG----------------------------------LTILDLSRNKLSGEIPEFLV 151
N+ +G L LDL N++ G +P+ L
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLT 265
Query: 152 GLKVIENLNLSYNDLEGMVPTEGVFKNASAISVLGNNKLCGGISEFKLPPC 202
LK + +LN+S+N+L G +P G + + N LCG LP C
Sbjct: 266 QLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS----PLPAC 312
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 643 IPSDFGSLSKIEVLSLG-FNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNL 701
IPS +L + L +G NNL+G IPP + L+ L + + N++G+IP LS++K L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 702 VILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRIT 761
V L N LSG +P SI ++ ++ N+I G IP YG + +I NR+T
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 762 GAIPPSISN 770
G IPP+ +N
Sbjct: 188 GKIPPTFAN 196
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 28/224 (12%)
Query: 567 LAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSC 626
L G I P I L+ L L + + + + IP + +++ L D + N++ G +P ++SS
Sbjct: 89 LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSL 148
Query: 627 SNLIRIGLAKNQLMGKIPSDFGSLSKI-EVLSLGFNNLIGSIPPPLGNLSSLRKISLAIN 685
NL+ I N++ G IP +GS SK+ +++ N L G IPP NL +L + L+ N
Sbjct: 149 PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRN 207
Query: 686 NLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGF 745
L G KN ++L N L+ FD+G+ + N+ G
Sbjct: 208 MLEGDASVLFGSDKNTQKIHLAKNSLA---------------FDLGKVGLSKNL---NGL 249
Query: 746 TLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789
L+N NRI G +P ++ L N L GE+P
Sbjct: 250 DLRN--------NRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 628 NLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNL 687
N + IG N L+G IP L+++ L + N+ G+IP L + +L + + N L
Sbjct: 79 NFLYIG-GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNAL 137
Query: 688 AGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSI-AEFDVGENKIQGNIPLDYGFT 746
+G++P ++S L NLV + NR+SG +P S + S + + N++ G IP F
Sbjct: 138 SGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT--FA 195
Query: 747 LQNLQYFSIGTNRITG 762
NL + + N + G
Sbjct: 196 NLNLAFVDLSRNMLEG 211
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 33/217 (15%)
Query: 552 SKAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLN 611
S+ + + LD L+G++ P I +L L + + N + IP G +L
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL------ 175
Query: 612 NNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPL 671
+ +++N+L GKIP F +L+ + + L N L G
Sbjct: 176 -----------------FTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLF 217
Query: 672 GNLSSLRKISLAINNLAGSIPFTLSKL---KNLVILYLGVNRLSGIVPSSIFNISSIAEF 728
G+ + +KI LA N+LA F L K+ KNL L L NR+ G +P + + +
Sbjct: 218 GSDKNTQKIHLAKNSLA----FDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSL 273
Query: 729 DVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIP 765
+V N + G IP G LQ + N+ P
Sbjct: 274 NVSFNNLCGEIP--QGGNLQRFDVSAYANNKCLCGSP 308
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 22/210 (10%)
Query: 276 NLIGTGSFGSVYKGVLDEGRTTVTVK----VFNLHHHRASRSFIAECRALRSIRHRNLVK 331
N G G FG VYKG ++ TTV VK + ++ + F E + +H NLV+
Sbjct: 28 NKXGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVE 85
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ G G+D LVY + NGSL ++R +D P L+ R IA
Sbjct: 86 LL----GFSSDGDDL-CLVYVYXPNGSL------LDRLSCLDGTPP-LSWHXRCKIAQGA 133
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSI 451
A+ +++LH + H D+K +NILLDE + + DFGLAR + G+
Sbjct: 134 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTT 190
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
Y APE L E++ D+YS+G+++LE+I
Sbjct: 191 AYXAPE-ALRGEITPKSDIYSFGVVLLEII 219
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG GSFG+V++ V + + H F+ E ++ +RH N+V A +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Q + ++V E++ GSL L+ +++D+ +RL++A DVA ++Y
Sbjct: 105 ----QPPNL-SIVTEYLSRGSLYRLLHKSGAREQLDER-------RRLSMAYDVAKGMNY 152
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
LH+ PI H DLK N+L+D++ V DFGL+R + + G+ ++APE
Sbjct: 153 LHNRNPPIV-HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA--GTPEWMAPE 209
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ DVYS+G+++ EL ++P
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ IRH LV+++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E+ K L L Q +++A +AS + Y
Sbjct: 84 ------EEPIYIVTEYMSKGSLLDFL-----KGEMGK---YLRLPQLVDMAAQIASGMAY 129
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 185
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 16 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E K L L Q +++A +AS + Y
Sbjct: 74 ------EEPIXIVTEYMSKGSLLDFL-----KGETGK---YLRLPQLVDMAAQIASGMAY 119
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 120 VERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAPE 175
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 176 AALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 15 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E+ K L L Q +++A +AS + Y
Sbjct: 73 ------EEPIYIVTEYMSKGSLLDFL-----KGEMGK---YLRLPQLVDMAAQIASGMAY 118
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 119 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 174
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E+ K L L Q +++A +AS + Y
Sbjct: 84 ------EEPIYIVIEYMSKGSLLDFL-----KGEMGK---YLRLPQLVDMAAQIASGMAY 129
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAPE 185
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E+ K L L Q +++A +AS + Y
Sbjct: 84 ------EEPIYIVIEYMSKGSLLDFL-----KGEMGK---YLRLPQLVDMAAQIASGMAY 129
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 185
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E+ K L L Q +++A +AS + Y
Sbjct: 84 ------EEPIYIVTEYMSKGSLLDFL-----KGEMGK---YLRLPQLVDMAAQIASGMAY 129
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 185
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 17 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E+ K L L Q +++A +AS + Y
Sbjct: 75 ------EEPIYIVTEYMSKGSLLDFL-----KGEMGK---YLRLPQLVDMAAQIASGMAY 120
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 121 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 176
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E+ K L L Q +++A +AS + Y
Sbjct: 84 ------EEPIYIVCEYMSKGSLLDFL-----KGEMGK---YLRLPQLVDMAAQIASGMAY 129
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 185
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 19 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E K L L Q +++A +AS + Y
Sbjct: 77 ------EEPIYIVTEYMSKGSLLDFL-----KGETGK---YLRLPQLVDMAAQIASGMAY 122
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 123 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 178
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E K L L Q +++A +AS + Y
Sbjct: 250 ------EEPIYIVTEYMSKGSLLDFL-----KGETGKY---LRLPQLVDMAAQIASGMAY 295
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 351
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 275 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E K L L Q +++A +AS + Y
Sbjct: 333 ------EEPIYIVTEYMSKGSLLDFL-----KGETGKY---LRLPQLVDMAAQIASGMAY 378
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 379 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 434
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 435 AALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E K L L Q +++A +AS + Y
Sbjct: 250 ------EEPIYIVTEYMSKGSLLDFL-----KGETGKY---LRLPQLVDMAAQIASGMAY 295
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 351
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E+ K L L Q +++A +AS + Y
Sbjct: 84 ------EEPIYIVTEYMSKGSLLDFL-----KGEMGK---YLRLPQLVDMAAQIASGMAY 129
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 130 VE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 185
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M G L ++L + E+ K L L Q +++A +AS + Y
Sbjct: 84 ------EEPIYIVMEYMSKGCLLDFL-----KGEMGK---YLRLPQLVDMAAQIASGMAY 129
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 185
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E K L L Q ++++ +AS + Y
Sbjct: 81 ------EEPIYIVTEYMNKGSLLDFL-----KGETGK---YLRLPQLVDMSAQIASGMAY 126
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 127 VERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE-WTARQGAKFPIKWTAPE 182
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + + +F+ E + ++ +RH LV+++ S
Sbjct: 193 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E+ K L L Q +++A +AS + Y
Sbjct: 251 ------EEPIYIVTEYMSKGSLLDFL-----KGEMGKY---LRLPQLVDMAAQIASGMAY 296
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGL R + T+ G K I + APE
Sbjct: 297 VE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEY-TARQGAKFPIKWTAPE 352
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 353 AALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M G L ++L + E+ K L L Q +++A +AS + Y
Sbjct: 84 ------EEPIYIVTEYMSKGCLLDFL-----KGEMGK---YLRLPQLVDMAAQIASGMAY 129
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 185
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E K L L Q +++A +AS + Y
Sbjct: 250 ------EEPIYIVGEYMSKGSLLDFL-----KGETGKY---LRLPQLVDMAAQIASGMAY 295
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ + H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 351
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + +F+ E + ++ +RH LV+++ S
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L + E K L L Q ++++ +AS + Y
Sbjct: 81 ------EEPIYIVTEYMNKGSLLDFL-----KGETGK---YLRLPQLVDMSAQIASGMAY 126
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ H DL+ +NIL+ E +V V DFGLAR + T+ G K I + APE
Sbjct: 127 VERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPE 182
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL + +
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V +K + SF+ E + ++ ++H LV+++ S
Sbjct: 17 LGNGQFGEVWMGTWN-GNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ +V E+M GSL ++L D R L L +++A VA+ + Y
Sbjct: 75 ------EEPIYIVTEYMNKGSLLDFL--------KDGEGRALKLPNLVDMAAQVAAGMAY 120
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ H DL+ +NIL+ ++ + DFGLAR + T+ G K I + APE
Sbjct: 121 IERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEX-TARQGAKFPIKWTAPE 176
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKK 485
L + DV+S+GIL+ EL+ + +
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 81 ----REPPFYIII-EFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 127
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 128 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 183
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 81 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 127
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 128 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPE 183
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 85 ----REPPFYIII-EFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 131
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 132 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 85 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 131
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 132 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 187
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 85 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 131
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 132 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 82 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 128
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 129 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 184
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 80 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 126
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 127 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 82 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 128
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 129 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPE 184
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 84 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 130
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 131 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 186
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEI 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 85 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 131
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 132 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 93 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 139
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 140 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 195
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 196 SLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 82 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 128
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 129 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 184
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 80 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 126
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 127 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ ++ + L +A ++SA++Y
Sbjct: 78 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEY 124
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 125 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 180
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ ++ + L +A ++SA++Y
Sbjct: 78 ----REPPFYIII-EFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEY 124
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 125 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 180
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ ++ + L +A ++SA++Y
Sbjct: 80 ----REPPFYIII-EFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEY 126
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 127 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ ++ + L +A ++SA++Y
Sbjct: 80 ----REPPFYIII-EFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEY 126
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 127 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ ++ + L +A ++SA++Y
Sbjct: 80 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEY 126
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 127 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ ++ + L +A ++SA++Y
Sbjct: 85 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEY 131
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 132 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ ++ + L +A ++SA++Y
Sbjct: 80 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEY 126
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 127 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 30 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 88 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 131
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 132 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTA 187
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 188 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 243
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 29 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 87 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 130
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 131 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTA 186
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 187 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 242
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 27 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 85 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 128
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 129 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTA 184
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 27 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 85 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 128
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 129 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTA 184
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 22 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 80 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 123
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 124 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTA 179
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 180 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 235
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 79 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 122
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTA 178
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 23 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 81 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 124
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 125 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTA 180
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 181 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 236
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 26 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 84 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 127
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 128 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTA 183
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 184 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 239
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 95/214 (44%), Gaps = 24/214 (11%)
Query: 276 NLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTA 335
++G G+FG V K V + + ++FI E R L + H N+VK++ A
Sbjct: 14 EVVGRGAFGVVCKAKW----RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
C + LV E+ + GSL N + P ++ + + +
Sbjct: 70 CL-------NPVCLVMEYAEGGSL------YNVLHGAEPLP-YYTAAHAMSWCLQCSQGV 115
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEE-MVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYI 454
YLH H DLKP N+LL V + DFG A +QT KGS ++
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWM 170
Query: 455 APEYGLGSEVSTNGDVYSYGILMLELIIRKKPSD 488
APE GS S DV+S+GI++ E+I R+KP D
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ ++ + L +A ++SA++Y
Sbjct: 78 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEY 124
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 125 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTF-TAHAGAKFPIKWTAPE 180
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 95/214 (44%), Gaps = 24/214 (11%)
Query: 276 NLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTA 335
++G G+FG V K V + + ++FI E R L + H N+VK++ A
Sbjct: 15 EVVGRGAFGVVCKAKW----RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
C + LV E+ + GSL N + P ++ + + +
Sbjct: 71 CL-------NPVCLVMEYAEGGSL------YNVLHGAEPLP-YYTAAHAMSWCLQCSQGV 116
Query: 396 DYLHHDCQPITTHCDLKPSNILL-DEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYI 454
YLH H DLKP N+LL V + DFG A +QT KGS ++
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWM 171
Query: 455 APEYGLGSEVSTNGDVYSYGILMLELIIRKKPSD 488
APE GS S DV+S+GI++ E+I R+KP D
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 16 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 74 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 117
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 118 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTA 173
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 174 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 229
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 27/235 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 31 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 89 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 132
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 133 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTA 188
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPD 507
PE + DV+S+GIL+ E++ + P E NL RM PD
Sbjct: 189 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 243
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 79 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 122
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 123 AFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTA 178
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 79 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 122
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 123 AFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTA 178
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 284 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 330
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H +L N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 331 LE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 386
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 387 SLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ +N + L +A ++SA++Y
Sbjct: 326 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEY 372
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H +L N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 373 LE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 428
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 429 SLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 17 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 75 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 118
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H +L+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 119 AFIEERNY---IHRNLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTA 174
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 230
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 278 IGTGSFGSVYKGV-LDEGRTTV-TVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTA 335
IG+G FG V+ G L++ + + T+K ++ + FI E + + H LV+++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSM----SEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL-NIAIDVASA 394
C LV+EFM++G L ++L + R L + L + +DV
Sbjct: 91 C-----LEQAPICLVFEFMEHGCLSDYL----------RTQRGLFAAETLLGMCLDVCEG 135
Query: 395 LDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYI 454
+ YL C H DL N L+ E V V DFG+ RF+ TSS G K + +
Sbjct: 136 MAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWA 191
Query: 455 APEYGLGSEVSTNGDVYSYGILMLELIIRKK 485
+PE S S+ DV+S+G+LM E+ K
Sbjct: 192 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 222
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG+G FG V+ G + V +K + FI E + + H LV+++ C
Sbjct: 15 IGSGQFGLVHLGYW-LNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC- 71
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL-NIAIDVASALD 396
LV+EFM++G L ++L + R L + L + +DV +
Sbjct: 72 ----LEQAPICLVFEFMEHGCLSDYL----------RTQRGLFAAETLLGMCLDVCEGMA 117
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
YL C H DL N L+ E V V DFG+ RF+ TSS G K + + +P
Sbjct: 118 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASP 173
Query: 457 EYGLGSEVSTNGDVYSYGILMLELIIRKK 485
E S S+ DV+S+G+LM E+ K
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 276 NLIGTGSFGSVYKGVLDE-GRTTVTVKVFNL---HHHRASRSFIAECRALRSIRHRNLVK 331
+IG G FG V +G L G+ V + L + R R F++E + H N+++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 332 VFTACSGVDYQGNDFKALVY-EFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + N ++ EFM+NG+L+ +L + + ++Q + +
Sbjct: 82 LEGVVT------NSMPVMILTEFMENGALDSFLRLNDGQ---------FTVIQLVGMLRG 126
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP-----PTHVQTSSI 445
+AS + YL + H DL NIL++ +V V DFGL+RFL PT +TSS+
Sbjct: 127 IASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT--ETSSL 181
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
G K I + APE + ++ D +SYGI+M E++
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 276 NLIGTGSFGSVYKGVLDE-GRTTVTVKVFNL---HHHRASRSFIAECRALRSIRHRNLVK 331
+IG G FG V +G L G+ V + L + R R F++E + H N+++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 332 VFTACSGVDYQGNDFKALVY-EFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + N ++ EFM+NG+L+ +L + + ++Q + +
Sbjct: 80 LEGVVT------NSMPVMILTEFMENGALDSFLRLNDGQ---------FTVIQLVGMLRG 124
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP-----PTHVQTSSI 445
+AS + YL + H DL NIL++ +V V DFGL+RFL PT+ TSS+
Sbjct: 125 IASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY--TSSL 179
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
G K I + APE + ++ D +SYGI+M E++
Sbjct: 180 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG+G FG V+ G + V +K + FI E + + H LV+++ C
Sbjct: 13 IGSGQFGLVHLGYW-LNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC- 69
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL-NIAIDVASALD 396
LV+EFM++G L ++L + R L + L + +DV +
Sbjct: 70 ----LEQAPICLVFEFMEHGCLSDYL----------RTQRGLFAAETLLGMCLDVCEGMA 115
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
YL C H DL N L+ E V V DFG+ RF+ TSS G K + + +P
Sbjct: 116 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASP 171
Query: 457 EYGLGSEVSTNGDVYSYGILMLELIIRKK 485
E S S+ DV+S+G+LM E+ K
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGK 200
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
F +V E+M G+L ++L NRE+ + + L +A ++SA++Y
Sbjct: 99 ----LEPPF-YIVTEYMPYGNLLDYLRECNREE--------VTAVVLLYMATQISSAMEY 145
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N L+ E V V DFGL+R + T+ G K I + APE
Sbjct: 146 LE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 201
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
+ S DV+++G+L+ E+
Sbjct: 202 SLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG+G FG V+ G + V +K + FI E + + H LV+++ C
Sbjct: 18 IGSGQFGLVHLGYW-LNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC- 74
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL-NIAIDVASALD 396
LV+EFM++G L ++L + R L + L + +DV +
Sbjct: 75 ----LEQAPICLVFEFMEHGCLSDYL----------RTQRGLFAAETLLGMCLDVCEGMA 120
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
YL C H DL N L+ E V V DFG+ RF+ TSS G K + + +P
Sbjct: 121 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASP 176
Query: 457 EYGLGSEVSTNGDVYSYGILMLELIIRKK 485
E S S+ DV+S+G+LM E+ K
Sbjct: 177 EVFSFSRYSSKSDVWSFGVLMWEVFSEGK 205
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+GTG FG V G G+ V +K+ + FI E + + ++ H LV+++ C+
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Q F ++ E+M NG L +L + Q L + DV A++Y
Sbjct: 90 K---QRPIF--IITEYMANGCLLNYLREMRH---------RFQTQQLLEMCKDVCEAMEY 135
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L H DL N L++++ V V DFGL+R++ +TSS+G K + + PE
Sbjct: 136 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-ETSSVGSKFPVRWSPPE 191
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
+ S+ S+ D++++G+LM E+
Sbjct: 192 VLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G +G VY+GV + TV VK F+ E ++ I+H NLV++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ F ++ EFM G+L ++L NR++ ++ + L +A ++SA++Y
Sbjct: 287 ----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEY 333
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H +L N L+ E + V DFGL+R + T+ G K I + APE
Sbjct: 334 LE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 389
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
++ S DV+++G+L+ E+
Sbjct: 390 SLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 27/236 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G G V+ G + G T V VK + +F+AE ++ ++H+ LV+++ +
Sbjct: 21 LGAGQAGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL--QRLNIAIDVASAL 395
+ ++ E+M+NGSL ++L K P + L + L++A +A +
Sbjct: 79 ------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAEGM 122
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
++ H DL+ +NIL+ + + + DFGLAR + T+ G K I + A
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX-TAREGAKFPIKWTA 178
Query: 456 PEYGLGSEVSTNGDVYSYGILMLELIIRKK---PSDIMFEGDMNLHNFARMALPDH 508
PE + DV+S+GIL+ E++ + P E NL RM PD+
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 34/218 (15%)
Query: 276 NLIGTGSFGSVYKGVLD-EGRTTVTVKVFNL---HHHRASRSFIAECRALRSIRHRNLVK 331
+IG G FG V G L G+ + V + L + + R F++E + H N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 332 ---VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
V T + V ++ EFM+NGSL+ +L R+++ ++Q + +
Sbjct: 99 LEGVVTKSTPV--------MIITEFMENGSLDSFL----RQND-----GQFTVIQLVGML 141
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP-----PTHVQTS 443
+A+ + YL H DL NIL++ +V V DFGL+RFL PT+ TS
Sbjct: 142 RGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY--TS 196
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
++G K I + APE + ++ DV+SYGI+M E++
Sbjct: 197 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 234
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+GTG FG V G G+ V +K+ + FI E + + ++ H LV+++ C+
Sbjct: 12 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Q F ++ E+M NG L +L + Q L + DV A++Y
Sbjct: 70 K---QRPIF--IITEYMANGCLLNYLREMRH---------RFQTQQLLEMCKDVCEAMEY 115
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L H DL N L++++ V V DFGL+R++ TSS+G K + + PE
Sbjct: 116 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPE 171
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
+ S+ S+ D++++G+LM E+
Sbjct: 172 VLMYSKFSSKSDIWAFGVLMWEI 194
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+GTG FG V G G+ V +K+ + FI E + + ++ H LV+++ C+
Sbjct: 16 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Q F ++ E+M NG L +L + Q L + DV A++Y
Sbjct: 74 K---QRPIF--IITEYMANGCLLNYLREMRH---------RFQTQQLLEMCKDVCEAMEY 119
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L H DL N L++++ V V DFGL+R++ TSS+G K + + PE
Sbjct: 120 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPE 175
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
+ S+ S+ D++++G+LM E+
Sbjct: 176 VLMYSKFSSKSDIWAFGVLMWEI 198
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+GTG FG V G G+ V +K+ + FI E + + ++ H LV+++ C+
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Q F ++ E+M NG L +L + Q L + DV A++Y
Sbjct: 75 K---QRPIF--IITEYMANGCLLNYLREMRH---------RFQTQQLLEMCKDVCEAMEY 120
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L H DL N L++++ V V DFGL+R++ TSS+G K + + PE
Sbjct: 121 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPE 176
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
+ S+ S+ D++++G+LM E+
Sbjct: 177 VLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+GTG FG V G G+ V +K+ + FI E + + ++ H LV+++ C+
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Q F ++ E+M NG L +L + Q L + DV A++Y
Sbjct: 90 K---QRPIF--IITEYMANGCLLNYLREMRH---------RFQTQQLLEMCKDVCEAMEY 135
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L H DL N L++++ V V DFGL+R++ TSS+G K + + PE
Sbjct: 136 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPE 191
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
+ S+ S+ D++++G+LM E+
Sbjct: 192 VLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+GTG FG V G G+ V +K+ + FI E + + ++ H LV+++ C+
Sbjct: 23 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Q F ++ E+M NG L +L + Q L + DV A++Y
Sbjct: 81 K---QRPIF--IITEYMANGCLLNYLREMRH---------RFQTQQLLEMCKDVCEAMEY 126
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L H DL N L++++ V V DFGL+R++ TSS+G K + + PE
Sbjct: 127 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPE 182
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
+ S+ S+ D++++G+LM E+
Sbjct: 183 VLMYSKFSSKSDIWAFGVLMWEI 205
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG+G FG V+ G + V +K + FI E + + H LV+++ C
Sbjct: 16 IGSGQFGLVHLGYW-LNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC- 72
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL-NIAIDVASALD 396
LV EFM++G L ++L + R L + L + +DV +
Sbjct: 73 ----LEQAPICLVTEFMEHGCLSDYL----------RTQRGLFAAETLLGMCLDVCEGMA 118
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
YL C H DL N L+ E V V DFG+ RF+ TSS G K + + +P
Sbjct: 119 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASP 174
Query: 457 EYGLGSEVSTNGDVYSYGILMLELIIRKK 485
E S S+ DV+S+G+LM E+ K
Sbjct: 175 EVFSFSRYSSKSDVWSFGVLMWEVFSEGK 203
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 29/218 (13%)
Query: 273 SSANLIGTGSFGSVYKGVLD--EGRTTVTVKVFNL---HHHRASRSFIAECRALRSIRHR 327
+ +IG G FG VYKG+L G+ V V + L + + F+ E + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 328 NLVKVFTACSGVDYQGNDFKAL--VYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
N++++ S +K + + E+M+NG+L+++L RE + + ++LQ +
Sbjct: 107 NIIRLEGVIS-------KYKPMMIITEYMENGALDKFL----REKDGE-----FSVLQLV 150
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTS 443
+ +A+ + YL + H DL NIL++ +V V DFGL+R L P T+
Sbjct: 151 GMLRGIAAGMKYLANMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
S G K I + APE + ++ DV+S+GI+M E++
Sbjct: 208 S-GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVM 244
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ ++ T V VK + +F+AE +++++H LVK+ +
Sbjct: 23 LGAGQFGEVWMATYNK-HTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ ++ EFM GSL ++L + DE K P L + ++ + +A + +
Sbjct: 81 ------KEPIYIITEFMAKGSLLDFL----KSDEGSKQP----LPKLIDFSAQIAEGMAF 126
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ Q H DL+ +NIL+ +V + DFGLAR + T+ G K I + APE
Sbjct: 127 IE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPE 182
Query: 458 YGLGSEVSTNGDVYSYGILMLELI 481
+ DV+S+GIL++E++
Sbjct: 183 AINFGSFTIKSDVWSFGILLMEIV 206
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 76
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + + E +++ ++IA A +
Sbjct: 77 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGM 122
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E++ +GDFGLA + GSI ++A
Sbjct: 123 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 456 PEYGLGSE---VSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 71
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + + E +++ ++IA A +
Sbjct: 72 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGM 117
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E++ +GDFGLA + GSI ++A
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 456 PEYGLGSE---VSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 18 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 73
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + + E +++ ++IA A +
Sbjct: 74 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGM 119
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E++ +GDFGLA + GSI ++A
Sbjct: 120 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 176
Query: 456 PEYGLGSE---VSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG+G FG V+ G + V +K + FI E + + H LV+++ C
Sbjct: 15 IGSGQFGLVHLGYW-LNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC- 71
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL-NIAIDVASALD 396
LV+EFM++G L ++L + R L + L + +DV +
Sbjct: 72 ----LEQAPICLVFEFMEHGCLSDYL----------RTQRGLFAAETLLGMCLDVCEGMA 117
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
YL + H DL N L+ E V V DFG+ RF+ TSS G K + + +P
Sbjct: 118 YLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASP 173
Query: 457 EYGLGSEVSTNGDVYSYGILMLELIIRKK 485
E S S+ DV+S+G+LM E+ K
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 76
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + + E +++ ++IA A +
Sbjct: 77 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGM 122
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E++ +GDFGLA + GSI ++A
Sbjct: 123 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 456 PEYGLGSE---VSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 71
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + + E +++ ++IA A +
Sbjct: 72 -----YSTAPQLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGM 117
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E++ +GDFGLA + GSI ++A
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 456 PEYGLGSE---VSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 34/218 (15%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ + + +F E LR RH N++ +F
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMG 99
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y D A+V ++ + SL + L+ + + Q ++IA A +
Sbjct: 100 -----YMTKDNLAIVTQWCEGSSLYKHLHVQETK---------FQMFQLIDIARQTAQGM 145
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLA----RFLPPTHVQTSSIGVKGSI 451
DYLH H D+K +NI L E + +GDFGLA R+ V+ + GS+
Sbjct: 146 DYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT----GSV 198
Query: 452 GYIAPEYGLGSE---VSTNGDVYSYGILMLELIIRKKP 486
++APE + S DVYSYGI++ EL+ + P
Sbjct: 199 LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 43 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 98
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + + E +++ ++IA A +
Sbjct: 99 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGM 144
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E++ +GDFGLA + GSI ++A
Sbjct: 145 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 201
Query: 456 PEYGLGSE---VSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 202 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+GTG FG V G G+ V +K+ + FI E + + ++ H LV+++ C+
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Q F ++ E+M NG L +L + Q L + DV A++Y
Sbjct: 75 K---QRPIF--IITEYMANGCLLNYLREMRH---------RFQTQQLLEMCKDVCEAMEY 120
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L H DL N L++++ V V DFGL+R++ TSS G K + + PE
Sbjct: 121 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSRGSKFPVRWSPPE 176
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
+ S+ S+ D++++G+LM E+
Sbjct: 177 VLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 99
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + + E +++ ++IA A +
Sbjct: 100 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGM 145
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E++ +GDFGLA + GSI ++A
Sbjct: 146 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 202
Query: 456 PEYGLGSE---VSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ ++ T V VK + +F+AE +++++H LVK+ +
Sbjct: 196 LGAGQFGEVWMATYNK-HTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ ++ EFM GSL ++L + DE K P L + ++ + +A + +
Sbjct: 254 ------KEPIYIITEFMAKGSLLDFL----KSDEGSKQP----LPKLIDFSAQIAEGMAF 299
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ Q H DL+ +NIL+ +V + DFGLAR + T+ G K I + APE
Sbjct: 300 IE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPE 355
Query: 458 YGLGSEVSTNGDVYSYGILMLELI 481
+ DV+S+GIL++E++
Sbjct: 356 AINFGSFTIKSDVWSFGILLMEIV 379
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 71
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + + E +++ ++IA A +
Sbjct: 72 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGM 117
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E++ +GDFGLA + GSI ++A
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 174
Query: 456 PEYGLGSE---VSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 34/218 (15%)
Query: 276 NLIGTGSFGSVYKGVLD-EGRTTVTVKVFNL---HHHRASRSFIAECRALRSIRHRNLVK 331
+IG G FG V G L G+ + V + L + + R F++E + H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 332 ---VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
V T + V ++ EFM+NGSL+ +L R+++ ++Q + +
Sbjct: 73 LEGVVTKSTPV--------MIITEFMENGSLDSFL----RQND-----GQFTVIQLVGML 115
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP-----PTHVQTS 443
+A+ + YL H L NIL++ +V V DFGL+RFL PT+ TS
Sbjct: 116 RGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY--TS 170
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
++G K I + APE + ++ DV+SYGI+M E++
Sbjct: 171 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 208
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 12/214 (5%)
Query: 275 ANLIGTGSFGSVYKGVLDEGRTT---VTVKVFNLHH--HRASRSFIAECRALRSIRHRNL 329
++G G FGSV +G L + T V VK L + R F++E ++ H N+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
+++ C + QG ++ FM+ G L +L ++ P+++ L L +
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL----YSRLETGPKHIPLQTLLKFMV 154
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG 449
D+A ++YL + H DL N +L ++M V DFGL++ + K
Sbjct: 155 DIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM 211
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIR 483
+ +IA E ++ DV+++G+ M E+ R
Sbjct: 212 PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 44/235 (18%)
Query: 272 FSSANLIGTGSFGSVYKGVLD-EGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLV 330
F LIG+G FG V+K +G+T V +V ++ +A R E +AL + H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV-KYNNEKAER----EVKALAKLDHVNIV 68
Query: 331 KVFTACSGVDY---------QGNDFKA---------------LVYEFMQNGSLEEWLYPV 366
G DY + +D+ + EF G+LE+W+
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EK 127
Query: 367 NREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426
R +++DK L L ++ + +DY+H H DLKPSNI L + +
Sbjct: 128 RRGEKLDKVL-ALELFEQ------ITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKI 177
Query: 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
GDFGL L +T S KG++ Y++PE + D+Y+ G+++ EL+
Sbjct: 178 GDFGLVTSLKNDGKRTRS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 36 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 91
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + + E +++ ++IA A +
Sbjct: 92 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGM 137
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E++ +GDFGLA + GSI ++A
Sbjct: 138 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 194
Query: 456 PEYGLGSE---VSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 195 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 99
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + + E +++ ++IA A +
Sbjct: 100 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETKFE---------MIKLIDIARQTAQGM 145
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E++ +GDFGLA + GSI ++A
Sbjct: 146 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 202
Query: 456 PEYGLGSE---VSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ EF+ GSL E+L K ++ ++ L +
Sbjct: 81 GVCYSA---GRRNLKLIMEFLPYGSLREYL---------QKHKERIDHIKLLQYTSQICK 128
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 184
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 33/259 (12%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
F LIG+G FG V+K T +K ++ +A R E +AL + H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 332 VFTACSGVDYQ-----GNDFKA------LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
G DY N ++ + EF G+LE+W+ R +++DK L
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVL-ALE 126
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHV 440
L ++ + +DY+H + DLKPSNI L + +GDFGL L
Sbjct: 127 LFEQ------ITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 441 QTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNF 500
+ S KG++ Y++PE + D+Y+ G+++ EL+ D FE +
Sbjct: 178 RXRS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAFETSKFFTDL 231
Query: 501 ARMALPDHVMDIVDSTLLN 519
+ D + D + TLL
Sbjct: 232 RDGIISD-IFDKKEKTLLQ 249
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 20 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 75
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + E+ K ++IA A +
Sbjct: 76 -----YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKL---------IDIARQTARGM 121
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E+ +GDFGLA + GSI ++A
Sbjct: 122 DYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 178
Query: 456 PE---YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 179 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 30/215 (13%)
Query: 276 NLIGTGSFGSVYKGVLD-EGRTTVTVKVFNL---HHHRASRSFIAECRALRSIRHRNLVK 331
+IG G FG V G L G+ + V + L + + R F++E + H N++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 332 ---VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
V T C V ++ E+M+NGSL+ +L K ++Q + +
Sbjct: 95 LEGVVTKCKPV--------MIITEYMENGSLDAFLR---------KNDGRFTVIQLVGML 137
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIG 446
+ S + YL D + H DL NIL++ +V V DFG++R L P T+ G
Sbjct: 138 RGIGSGMKYLS-DMSAV--HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR-G 193
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
K I + APE + ++ DV+SYGI+M E++
Sbjct: 194 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 228
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 30/204 (14%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ ++ T V VK + +F+AE +++++H LVK+ +
Sbjct: 190 LGAGQFGEVWMATYNK-HTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ ++ EFM GSL ++L + DE K P L + ++ + +A + +
Sbjct: 248 ------KEPIYIITEFMAKGSLLDFL----KSDEGSKQP----LPKLIDFSAQIAEGMAF 293
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
+ Q H DL+ +NIL+ +V + DFGLAR +G K I + APE
Sbjct: 294 IE---QRNYIHRDLRAANILVSASLVCKIADFGLAR-----------VGAKFPIKWTAPE 339
Query: 458 YGLGSEVSTNGDVYSYGILMLELI 481
+ DV+S+GIL++E++
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIV 363
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD-EGRTTVTVKVFNL---HHHRASRSFIAECRALRSIRHRNLVK 331
+IG G FG V G L G+ V V + L + + R F+ E + H N+V
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV +G +V EFM+NG+L+ +L K ++Q + + +
Sbjct: 109 L----EGVVTRGKPV-MIVIEFMENGALDAFL---------RKHDGQFTVIQLVGMLRGI 154
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
A+ + YL H DL NIL++ +V V DFGL+R + P V T++ G K
Sbjct: 155 AAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTT-GGKI 210
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + APE + ++ DV+SYGI+M E++
Sbjct: 211 PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRS--IRHR 327
D LIG G +G+VYKG LDE V VKVF+ + ++FI E R + H
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDE--RPVAVKVFSFANR---QNFINEKNIYRVPLMEHD 67
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+ + V G LV E+ NGSL ++L + + + +
Sbjct: 68 NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----------SLHTSDWVSSCRL 116
Query: 388 AIDVASALDYLHHDC------QPITTHCDLKPSNILLDEEMVSHVGDFGLA------RFL 435
A V L YLH + +P +H DL N+L+ + + DFGL+ R +
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 436 PPTHVQTSSIGVKGSIGYIAPEYGLGS-------EVSTNGDVYSYGILMLELIIR 483
P ++I G+I Y+APE G+ D+Y+ G++ E+ +R
Sbjct: 177 RPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 87
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + E+ K ++IA A +
Sbjct: 88 -----YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKL---------IDIARQTARGM 133
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E+ +GDFGLA + GSI ++A
Sbjct: 134 DYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 456 PE---YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 24/221 (10%)
Query: 278 IGTGSFGSVYKG-----VLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKV 332
+G G+FG V+ + ++ + V VK A + F E L ++H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEV-----DKAPRNLNLLQRLNI 387
F C+ +G +V+E+M++G L +L + ++ D AP L L Q L +
Sbjct: 109 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 388 AIDVASALDYL---HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
A VA+ + YL H H DL N L+ + +V +GDFG++R + T
Sbjct: 164 ASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 217
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKK 485
I ++ PE L + +T DV+S+G+++ E+ K
Sbjct: 218 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 276 NLIGTGSFGSVYKGVLD-EGRTTVTVKVFNL---HHHRASRSFIAECRALRSIRHRNLVK 331
+IG G FG V G L G+ + V + L + + R F++E + H N++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 332 ---VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
V T C V ++ E+M+NGSL+ +L K ++Q + +
Sbjct: 74 LEGVVTKCKPV--------MIITEYMENGSLDAFLR---------KNDGRFTVIQLVGML 116
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIG 446
+ S + YL H DL NIL++ +V V DFG++R L P T+ G
Sbjct: 117 RGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR-G 172
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
K I + APE + ++ DV+SYGI+M E++
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 207
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 24/203 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG G FG V G D V VK + + +++F+AE + +RH NLV++
Sbjct: 20 IGKGEFGDVMLG--DYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 74
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
V+ +G + +V E+M GSL ++L R L L ++DV A++Y
Sbjct: 75 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRS--------VLGGDCLLKFSLDVCEAMEY 123
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N+L+ E+ V+ V DFGL + T T + VK + APE
Sbjct: 124 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVK----WTAPE 175
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
+ ST DV+S+GIL+ E+
Sbjct: 176 ALREAAFSTKSDVWSFGILLWEI 198
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 276 NLIGTGSFGSVYKGVLD-EGRTTVTVKVFNL---HHHRASRSFIAECRALRSIRHRNLVK 331
+IG G FG V G L G+ + V + L + + R F++E + H N++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 332 ---VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
V T C V ++ E+M+NGSL+ +L K ++Q + +
Sbjct: 80 LEGVVTKCKPV--------MIITEYMENGSLDAFLR---------KNDGRFTVIQLVGML 122
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIG 446
+ S + YL H DL NIL++ +V V DFG++R L P T+ G
Sbjct: 123 RGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR-G 178
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
K I + APE + ++ DV+SYGI+M E++
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 24/203 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG G FG V G D V VK + + +++F+AE + +RH NLV++
Sbjct: 14 IGKGEFGDVMLG--DYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 68
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
V+ +G + +V E+M GSL ++L R L L ++DV A++Y
Sbjct: 69 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRS--------VLGGDCLLKFSLDVCEAMEY 117
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N+L+ E+ V+ V DFGL + T T + VK + APE
Sbjct: 118 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVK----WTAPE 169
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
+ ST DV+S+GIL+ E+
Sbjct: 170 ALREKKFSTKSDVWSFGILLWEI 192
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 24/221 (10%)
Query: 278 IGTGSFGSVYKG-----VLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKV 332
+G G+FG V+ + ++ + V VK A + F E L ++H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEV-----DKAPRNLNLLQRLNI 387
F C+ +G +V+E+M++G L +L + ++ D AP L L Q L +
Sbjct: 86 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 388 AIDVASALDYL---HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
A VA+ + YL H H DL N L+ + +V +GDFG++R + T
Sbjct: 141 ASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKK 485
I ++ PE L + +T DV+S+G+++ E+ K
Sbjct: 195 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 235
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 24/203 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG G FG V G D V VK + + +++F+AE + +RH NLV++
Sbjct: 29 IGKGEFGDVMLG--DYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 83
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
V+ +G + +V E+M GSL ++L R L L ++DV A++Y
Sbjct: 84 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRS--------VLGGDCLLKFSLDVCEAMEY 132
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N+L+ E+ V+ V DFGL + T T + VK + APE
Sbjct: 133 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVK----WTAPE 184
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
+ ST DV+S+GIL+ E+
Sbjct: 185 ALREKKFSTKSDVWSFGILLWEI 207
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 24/221 (10%)
Query: 278 IGTGSFGSVYKG-----VLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKV 332
+G G+FG V+ + ++ + V VK A + F E L ++H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEV-----DKAPRNLNLLQRLNI 387
F C+ +G +V+E+M++G L +L + ++ D AP L L Q L +
Sbjct: 80 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 388 AIDVASALDYL---HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
A VA+ + YL H H DL N L+ + +V +GDFG++R + T
Sbjct: 135 ASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKK 485
I ++ PE L + +T DV+S+G+++ E+ K
Sbjct: 189 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 229
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 30/221 (13%)
Query: 276 NLIGTGSFGSVYKGVL--DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+IG G FG VY+ DE + + + E + ++H N++
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII--- 69
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
A GV + + LV EF + G P+NR + P ++ +N A+ +A
Sbjct: 70 -ALRGVCLKEPNL-CLVMEFARGG-------PLNRVLSGKRIPPDI----LVNWAVQIAR 116
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEM--------VSHVGDFGLARFLPPTHVQTSSI 445
++YLH + H DLK SNIL+ +++ + + DFGLAR +T+ +
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKM 172
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ ++APE S S DV+SYG+L+ EL+ + P
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 23/215 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEGRTT---VTVKVFN-LHHHRASRSFIAECRALRSIRH 326
++G+G+FG+VYKG+ + EG T V +K+ N +A+ F+ E + S+ H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
+LV++ C Q LV + M +G L E+++ +D N+ LN
Sbjct: 100 PHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH--EHKD-------NIGSQLLLN 144
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A + YL + H DL N+L+ + DFGLAR L + ++ G
Sbjct: 145 WCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 201
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
K I ++A E + + DV+SYG+ + EL+
Sbjct: 202 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 236
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR--SFIAECRALRSIRHRNLVKVFTA 335
IG+GSFG+VYKG + V VK+ N+ + +F E LR RH N++ +F
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 87
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
Y A+V ++ + SL L+ + E+ K ++IA A +
Sbjct: 88 -----YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKL---------IDIARQTARGM 133
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
DYLH H DLK +NI L E+ +GDFGLA + GSI ++A
Sbjct: 134 DYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 456 PE---YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
PE + S DVY++GI++ EL+ + P
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEGRTT---VTVKVFN-LHHHRASRSFIAECRALRSIRH 326
++G+G+FG+VYKG+ + EG T V +K+ N +A+ F+ E + S+ H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
+LV++ C Q LV + M +G L E+ V + N+ LN
Sbjct: 77 PHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEY---------VHEHKDNIGSQLLLN 121
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A + YL + H DL N+L+ + DFGLAR L + ++ G
Sbjct: 122 WCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 178
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E + + DV+SYG+ + EL+ KP D
Sbjct: 179 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 125
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 181
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 125
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 181
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 76 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 123
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 124 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 179
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 180 FWYAPESLTESKFSVASDVWSFGVVLYELF 209
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 96 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 143
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 144 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 199
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 34/257 (13%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + T V VK + ++F+ E +++++H LV+++ +
Sbjct: 20 LGAGQFGEVWMGYYNNS-TKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL-NIAIDVASALD 396
+ ++ EFM GSL ++L + DE K LL +L + + +A +
Sbjct: 78 K-----EEPIYIITEFMAKGSLLDFL----KSDEGGKV-----LLPKLIDFSAQIAEGMA 123
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
Y+ H DL+ +N+L+ E ++ + DFGLAR + T+ G K I + AP
Sbjct: 124 YIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAP 179
Query: 457 EYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNL---------HNFARMA-LP 506
E + +V+S+GIL+ E++ K I + G N + RM P
Sbjct: 180 EAINFGCFTIKSNVWSFGILLYEIVTYGK---IPYPGRTNADVMSALSQGYRMPRMENCP 236
Query: 507 DHVMDIVDSTLLNDVED 523
D + DI+ E+
Sbjct: 237 DELYDIMKMCWKEKAEE 253
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 77 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 124
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 125 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 180
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 181 FWYAPESLTESKFSVASDVWSFGVVLYELF 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 109 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 156
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 157 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 212
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 213 FWYAPESLTESKFSVASDVWSFGVVLYELF 242
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 82 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 129
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 130 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 185
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 186 FWYAPESLTESKFSVASDVWSFGVVLYELF 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 96 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 143
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 144 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 199
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 85 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 132
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 133 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 188
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 189 FWYAPESLTESKFSVASDVWSFGVVLYELF 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 84 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 131
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 132 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 187
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 188 FWYAPESLTESKFSVASDVWSFGVVLYELF 217
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 83 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 130
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 131 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 186
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 187 FWYAPESLTESKFSVASDVWSFGVVLYELF 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 81 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 128
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 184
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 125
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTH--VQTSSIGVKGSI 451
++YL H DL NIL++ E +GDFGL + LP + G + I
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG-ESPI 181
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 24/203 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG G FG V G D V VK + + +++F+AE + +RH NLV++
Sbjct: 201 IGKGEFGDVMLG--DYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 255
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
V+ +G + +V E+M GSL ++L R L L ++DV A++Y
Sbjct: 256 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRS--------VLGGDCLLKFSLDVCEAMEY 304
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
L + H DL N+L+ E+ V+ V DFGL + T T + VK + APE
Sbjct: 305 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVK----WTAPE 356
Query: 458 YGLGSEVSTNGDVYSYGILMLEL 480
+ ST DV+S+GIL+ E+
Sbjct: 357 ALREKKFSTKSDVWSFGILLWEI 379
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 34/257 (13%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G FG V+ G + T V VK + ++F+ E +++++H LV+++ +
Sbjct: 21 LGAGQFGEVWMGYYNNS-TKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL-NIAIDVASALD 396
+ ++ E+M GSL ++L + DE K LL +L + + +A +
Sbjct: 79 R-----EEPIYIITEYMAKGSLLDFL----KSDEGGKV-----LLPKLIDFSAQIAEGMA 124
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
Y+ H DL+ +N+L+ E ++ + DFGLAR + T+ G K I + AP
Sbjct: 125 YIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAP 180
Query: 457 EYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMN------LHNFARMA----LP 506
E + DV+S+GIL+ E++ K I + G N L RM P
Sbjct: 181 EAINFGCFTIKSDVWSFGILLYEIVTYGK---IPYPGRTNADVMTALSQGYRMPRVENCP 237
Query: 507 DHVMDIVDSTLLNDVED 523
D + DI+ E+
Sbjct: 238 DELYDIMKMCWKEKAEE 254
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E+M+NGSL+ +L K ++Q + + +
Sbjct: 111 L----EGVVTKSKPV-MIVTEYMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 156
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL D + H DL NIL++ +V V DFGLAR L P T+ G K
Sbjct: 157 ASGMKYLS-DMGYV--HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR-GGKI 212
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKV 332
+G G+FG V+ + + V VK A + F E L +++H ++VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDE--VDKAPRN----LNLLQRLN 386
+ C D +V+E+M++G L ++L + VD PR L L Q L+
Sbjct: 83 YGVCGD-----GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
IA +AS + YL H DL N L+ ++ +GDFG++R + T
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKK 485
I ++ PE + + +T DV+S+G+++ E+ K
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 233
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 278 IGTGSFGSV-----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKV 332
+G G+FG V Y ++ + V VK A + F E L +++H ++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA----PRNLNLLQRLNIA 388
+ C D +V+E+M++G L ++L + D V A P L Q L+IA
Sbjct: 81 YGVCVE-----GDPLIMVFEYMKHGDLNKFL-RAHGPDAVLMAEGNPPTELTQSQMLHIA 134
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
+A+ + YL H DL N L+ E ++ +GDFG++R + T
Sbjct: 135 QQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTM 191
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKK 485
I ++ PE + + +T DV+S G+++ E+ K
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L K ++ ++ L +
Sbjct: 79 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QKHKERIDHIKLLQYTSQICK 126
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKGSI 451
++YL H +L NIL++ E +GDFGL + LP + + G + I
Sbjct: 127 GMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG-ESPI 182
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 183 FWYAPESLTESKFSVASDVWSFGVVLYELF 212
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E+M+NGSL+ +L K ++Q + + +
Sbjct: 99 L----EGVVTKSKPV-MIVTEYMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 144
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL D + H DL NIL++ +V V DFGL+R L P T+ G K
Sbjct: 145 ASGMKYLS-DMGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKI 200
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 232
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E+M+NGSL+ +L K ++Q + + +
Sbjct: 82 L----EGVVTKSKPV-MIVTEYMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 127
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL D + H DL NIL++ +V V DFGL+R L P T+ G K
Sbjct: 128 ASGMKYLS-DMGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKI 183
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 278 IGTGSFGSVYKGVLD-EGRTT---VTVKVFNLH---HHRASRSFIAECRALRSIRHRNLV 330
+G G FG V D EG T V VK +H A E LR++ H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD--LKKEIEILRNLYHENIV 86
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
K C+ + GN K L+ EF+ +GSL+E+L P N+ +NL Q+L A+
Sbjct: 87 KYKGICT--EDGGNGIK-LIMEFLPSGSLKEYL-PKNK--------NKINLKQQLKYAVQ 134
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS 450
+ +DYL H DL N+L++ E +GDFGL + + + + S
Sbjct: 135 ICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 191
Query: 451 -IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + APE + S+ DV+S+G+ + EL+
Sbjct: 192 PVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 278 IGTGSFGSVYKGVLD-EGRTT---VTVKVFNLH---HHRASRSFIAECRALRSIRHRNLV 330
+G G FG V D EG T V VK +H A E LR++ H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD--LKKEIEILRNLYHENIV 74
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
K C+ + GN K L+ EF+ +GSL+E+L P N+ +NL Q+L A+
Sbjct: 75 KYKGICT--EDGGNGIK-LIMEFLPSGSLKEYL-PKNK--------NKINLKQQLKYAVQ 122
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS 450
+ +DYL H DL N+L++ E +GDFGL + + + + S
Sbjct: 123 ICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 179
Query: 451 -IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + APE + S+ DV+S+G+ + EL+
Sbjct: 180 PVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASR-SFIAECRAL 321
A + + + +G GSFG VY+GV DE T V +K N R F+ E +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ ++V++ GV QG ++ E M G L+ +L + E E + +L
Sbjct: 68 KEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
+ + +A ++A + YL+ + H DL N ++ E+ +GDFG+ R + T
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 442 TSSIGVKG--SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G KG + +++PE +T DV+S+G+++ E+
Sbjct: 180 RK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E L+S++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C G L+ E++ GSL ++L ++ ++ L +
Sbjct: 81 GVCYSA---GRRNLKLIMEYLPYGSLRDYL---------QAHAERIDHIKLLQYTSQICK 128
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS--I 451
++YL H DL NIL++ E +GDFGL + LP + + G I
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPI 184
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ APE S+ S DV+S+G+++ EL
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E+M+NGSL+ +L K ++Q + + +
Sbjct: 111 L----EGVVTKSKPV-MIVTEYMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 156
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL D + H DL NIL++ +V V DFGL+R L P T+ G K
Sbjct: 157 ASGMKYLS-DMGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKI 212
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 19/220 (8%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRH 326
++ F +G G++ +VYKG+ V +K L + S I E ++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+V+++ V + N LV+EFM N L++++ V PR L L
Sbjct: 63 ENIVRLY----DVIHTENKL-TLVFEFMDN-DLKKYM----DSRTVGNTPRGLELNLVKY 112
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSI 445
+ L + H + H DLKP N+L+++ +GDFGLAR F P + +S +
Sbjct: 113 FQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV 169
Query: 446 GVKGSIGYIAPEYGLGSEV-STNGDVYSYGILMLELIIRK 484
++ Y AP+ +GS ST+ D++S G ++ E+I K
Sbjct: 170 ---VTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD-EGRTTVTVKVFNL---HHHRASRSFIAECRALRSIRHRNLVK 331
+IG G FG V G L G+ + V + L + + R F+ E + H N++
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E+M+NGSL+ +L + D + + +L+ ++ +
Sbjct: 88 L----EGVVTKSKPV-MIVTEYMENGSLDTFL---KKNDGQFTVIQLVGMLRGISAGMKY 139
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
S + Y+H D L NIL++ +V V DFGL+R L P T+ G K
Sbjct: 140 LSDMGYVHRD---------LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKI 189
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + APE + ++ DV+SYGI+M E++
Sbjct: 190 PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVV 221
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E+M+NGSL+ +L K ++Q + + +
Sbjct: 111 L----EGVVTKSKPV-MIVTEYMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 156
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL H DL NIL++ +V V DFGL+R L P T+ G K
Sbjct: 157 ASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKI 212
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E+M+NGSL+ +L K ++Q + + +
Sbjct: 111 L----EGVVTKSKPV-MIVTEYMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 156
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL D + H DL NIL++ +V V DFGL+R L P T+ G K
Sbjct: 157 ASGMKYLS-DMGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKI 212
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E+M+NGSL+ +L K ++Q + + +
Sbjct: 111 L----EGVVTKSKPV-MIVTEYMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 156
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL D + H DL NIL++ +V V DFGL+R L P T+ G K
Sbjct: 157 ASGMKYLS-DMGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKI 212
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E+M+NGSL+ +L K ++Q + + +
Sbjct: 111 L----EGVVTKSKPV-MIVTEYMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 156
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL H DL NIL++ +V V DFGL+R L P T+ G K
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKI 212
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G+G FG V G +G+ V VK+ + F E + + + H LVK + CS
Sbjct: 16 LGSGQFGVVKLGKW-KGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 338 GVDYQGNDFK-ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
++ +V E++ NG L +L + L Q L + DV +
Sbjct: 74 ------KEYPIYIVTEYISNGCLLNYL---------RSHGKGLEPSQLLEMCYDVCEGMA 118
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
+L Q I H DL N L+D ++ V DFG+ R++ SS+G K + + AP
Sbjct: 119 FLESH-QFI--HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VSSVGTKFPVKWSAP 174
Query: 457 EYGLGSEVSTNGDVYSYGILMLELI-IRKKPSDI 489
E + S+ DV+++GILM E+ + K P D+
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASR-SFIAECRAL 321
A + + + +G GSFG VY+GV DE T V +K N R F+ E +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ ++V++ GV QG ++ E M G L+ +L + E E + +L
Sbjct: 77 KEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
+ + +A ++A + YL+ + H DL N ++ E+ +GDFG+ R + T
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 442 TSSIGVKG--SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G KG + +++PE +T DV+S+G+++ E+
Sbjct: 189 RK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E+M+NGSL+ +L K ++Q + + +
Sbjct: 109 L----EGVVTKSKPV-MIVTEYMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 154
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL D + H DL NIL++ +V V DFGL+R L P T+ G K
Sbjct: 155 ASGMKYLS-DMGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKI 210
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 211 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 242
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E+M+NGSL+ +L K ++Q + + +
Sbjct: 111 L----EGVVTKSKPV-MIVTEYMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 156
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL D + H DL NIL++ +V V DFGL R L P T+ G K
Sbjct: 157 ASGMKYLS-DMGYV--HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR-GGKI 212
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 33/222 (14%)
Query: 276 NLIGTGSFGSVYKGVLDEG--RTTVTVKVFNLHHHRAS-RSFIAECRALRSI-RHRNLVK 331
++IG G+FG V K + + R +K + + R F E L + H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-------PRNLNLLQR 384
+ AC +++G + L E+ +G+L ++L +R E D A L+ Q
Sbjct: 91 LLGAC---EHRG--YLYLAIEYAPHGNLLDFLRK-SRVLETDPAFAIANSTASTLSSQQL 144
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
L+ A DVA +DYL Q H DL NIL+ E V+ + DFGL+R
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR--------GQE 193
Query: 445 IGVKGSIG-----YIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ VK ++G ++A E S +TN DV+SYG+L+ E++
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 32/239 (13%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS-----RSFIAECRALRSIRH 326
+ + +G G F +VYK V +K L H + R+ + E + L+ + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N++ + A ++ N +LV++FM+ L + +++ + P ++ +
Sbjct: 72 PNIIGLLDAFG---HKSN--ISLVFDFMETD-----LEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSI 445
+ L+YLH Q H DLKP+N+LLDE V + DFGLA+ F P +
Sbjct: 122 L-----QGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQV 173
Query: 446 GVKGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ Y APE G+ + G D+++ G ++ EL++R GD +L R+
Sbjct: 174 VTR---WYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP----FLPGDSDLDQLTRI 225
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 33/222 (14%)
Query: 276 NLIGTGSFGSVYKGVLDEG--RTTVTVKVFNLHHHRAS-RSFIAECRALRSI-RHRNLVK 331
++IG G+FG V K + + R +K + + R F E L + H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-------PRNLNLLQR 384
+ AC +++G + L E+ +G+L ++L +R E D A L+ Q
Sbjct: 81 LLGAC---EHRG--YLYLAIEYAPHGNLLDFLRK-SRVLETDPAFAIANSTASTLSSQQL 134
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
L+ A DVA +DYL Q H DL NIL+ E V+ + DFGL+R
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR--------GQE 183
Query: 445 IGVKGSIG-----YIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ VK ++G ++A E S +TN DV+SYG+L+ E++
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E M+NGSL+ +L K ++Q + + +
Sbjct: 111 L----EGVVTKSKPV-MIVTEXMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 156
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL D + H DL NIL++ +V V DFGL+R L P T+ G K
Sbjct: 157 ASGMKYLS-DMGAV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKI 212
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD-EGRTTVTVKVFNL---HHHRASRSFIAECRALRSIRHRNLVK 331
+IG+G G V G L G+ V V + L + R R F++E + H N+++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV +G +V E+M+NGSL+ +L + + ++Q + + V
Sbjct: 115 L----EGVVTRGR-LAMIVTEYMENGSLDTFLRTHDGQ---------FTIMQLVGMLRGV 160
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
+ + YL D + H DL N+L+D +V V DFGL+R L P T++ G K
Sbjct: 161 GAGMRYLS-DLGYV--HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTT-GGKI 216
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + APE S+ DV+S+G++M E++
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E M+NGSL+ +L K ++Q + + +
Sbjct: 82 L----EGVVTKSKPV-MIVTEXMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 127
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL D + H DL NIL++ +V V DFGL+R L P T+ G K
Sbjct: 128 ASGMKYLS-DMGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKI 183
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASR-SFIAECRAL 321
A + + + +G GSFG VY+GV DE T V +K N R F+ E +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ ++V++ GV QG ++ E M G L+ +L + E E + +L
Sbjct: 70 KEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
+ + +A ++A + YL+ + H DL N ++ E+ +GDFG+ R + T
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 442 TSSIGVKG--SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G KG + +++PE +T DV+S+G+++ E+
Sbjct: 182 RK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASR-SFIAECRAL 321
A + + + +G GSFG VY+GV DE T V +K N R F+ E +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ ++V++ GV QG ++ E M G L+ +L + E E + +L
Sbjct: 76 KEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
+ + +A ++A + YL+ + H DL N ++ E+ +GDFG+ R + T
Sbjct: 131 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 442 TSSIGVKG--SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G KG + +++PE +T DV+S+G+++ E+
Sbjct: 188 RK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD-EGRTTVTVKVFNL---HHHRASRSFIAECRALRSIRHRNLVK 331
+IG+G G V G L G+ V V + L + R R F++E + H N+++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV +G +V E+M+NGSL+ +L + + ++Q + + V
Sbjct: 115 L----EGVVTRGR-LAMIVTEYMENGSLDTFLRTHDGQ---------FTIMQLVGMLRGV 160
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
+ + YL D + H DL N+L+D +V V DFGL+R L P T++ G K
Sbjct: 161 GAGMRYLS-DLGYV--HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT-GGKI 216
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + APE S+ DV+S+G++M E++
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASR-SFIAECRAL 321
A + + + +G GSFG VY+GV DE T V +K N R F+ E +
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ ++V++ GV QG ++ E M G L+ +L + E E + +L
Sbjct: 74 KEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
+ + +A ++A + YL+ + H DL N ++ E+ +GDFG+ R + T
Sbjct: 129 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 185
Query: 442 TSSIGVKG--SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G KG + +++PE +T DV+S+G+++ E+
Sbjct: 186 RK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASR-SFIAECRAL 321
A + + + +G GSFG VY+GV DE T V +K N R F+ E +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ ++V++ GV QG ++ E M G L+ +L + E E + +L
Sbjct: 76 KEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
+ + +A ++A + YL+ + H DL N ++ E+ +GDFG+ R + T
Sbjct: 131 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 442 TSSIGVKG--SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G KG + +++PE +T DV+S+G+++ E+
Sbjct: 188 RK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASR-SFIAECRAL 321
A + + + +G GSFG VY+GV DE T V +K N R F+ E +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ ++V++ GV QG ++ E M G L+ +L + E E + +L
Sbjct: 83 KEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
+ + +A ++A + YL+ + H DL N ++ E+ +GDFG+ R + T
Sbjct: 138 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 442 TSSIGVKG--SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G KG + +++PE +T DV+S+G+++ E+
Sbjct: 195 RK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASR-SFIAECRAL 321
A + + + +G GSFG VY+GV DE T V +K N R F+ E +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ ++V++ GV QG ++ E M G L+ +L + E E + +L
Sbjct: 77 KEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
+ + +A ++A + YL+ + H DL N ++ E+ +GDFG+ R + T
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 188
Query: 442 TSSIGVKG--SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G KG + +++PE +T DV+S+G+++ E+
Sbjct: 189 RK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASR-SFIAECRAL 321
A + + + +G GSFG VY+GV DE T V +K N R F+ E +
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ ++V++ GV QG ++ E M G L+ +L + E E + +L
Sbjct: 105 KEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
+ + +A ++A + YL+ + H DL N ++ E+ +GDFG+ R + T
Sbjct: 160 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 216
Query: 442 TSSIGVKG--SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G KG + +++PE +T DV+S+G+++ E+
Sbjct: 217 RK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLV 330
F +G G FG V++ +K L + +R + E +AL + H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 331 KVFTAC----SGVDYQGNDFKALVYEFMQ---NGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
+ F A + Q + K +Y MQ +L++W+ N +++ R++ L
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM---NGRCTIEERERSVCL-- 121
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLA----------R 433
+I + +A A+++LH H DLKPSNI + V VGDFGL
Sbjct: 122 --HIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 434 FLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
L P G G+ Y++PE G+ S D++S G+++ EL+
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 276 NLIGTGSFGSVYKGVLD---EGRTTVTVKVFNL-HHHRASRSFIAECRALRSIRHRNLVK 331
++G G FG V G L + +V +K + + + R F+ E + H N+++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV + +V E M+NGSL+ +L K ++Q + + +
Sbjct: 111 L----EGVVTKSKPV-MIVTEXMENGSLDSFLR---------KHDAQFTVIQLVGMLRGI 156
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTSSIGVKG 449
AS + YL H DL NIL++ +V V DFGL+R L P T+ G K
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR-GGKI 212
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I + +PE + ++ DV+SYGI++ E++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 33/222 (14%)
Query: 276 NLIGTGSFGSVYKGVLDEG--RTTVTVKVFNLHHHRAS-RSFIAECRALRSI-RHRNLVK 331
++IG G+FG V K + + R +K + + R F E L + H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-------PRNLNLLQR 384
+ AC +++G + L E+ +G+L ++L +R E D A L+ Q
Sbjct: 88 LLGAC---EHRG--YLYLAIEYAPHGNLLDFLRK-SRVLETDPAFAIANSTASTLSSQQL 141
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
L+ A DVA +DYL Q H +L NIL+ E V+ + DFGL+R
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR--------GQE 190
Query: 445 IGVKGSIG-----YIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ VK ++G ++A E S +TN DV+SYG+L+ E++
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-----ASRSFIAECRALR 322
AT + IG G++G+VYK V +K + + ++ +A R L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR-NLNL 381
+ H N+V++ C+ LV+E + + L +L DKAP L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL---------DKAPPPGLPA 111
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
++ LD+LH +C H DLKP NIL+ + DFGLAR Q
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQ 165
Query: 442 TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ V ++ Y APE L S +T D++S G + E+ R+KP
Sbjct: 166 MALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKP 209
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASR-SFIAECRAL 321
A + + + +G GSFG VY+GV DE T V +K N R F+ E +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ ++V++ GV QG ++ E M G L+ +L + E E + +L
Sbjct: 70 KEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
+ + +A ++A + YL+ + H DL N + E+ +GDFG+ R + T
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 442 TSSIGVKG--SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G KG + +++PE +T DV+S+G+++ E+
Sbjct: 182 RK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 276 NLIGTGSFGSVYKGV-LDEG---RTTVTVKVFNLHHHRAS-RSFIAECRALRSIRHRNLV 330
++G+G FG+V+KGV + EG + V +KV R S ++ A+ S+ H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
++ C G Q LV +++ GSL D V + L LN +
Sbjct: 97 RLLGLCPGSSLQ------LVTQYLPLGSLL---------DHVRQHRGALGPQLLLNWGVQ 141
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS 450
+A + YL H +L N+LL V DFG+A LPP Q K
Sbjct: 142 IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 198
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I ++A E + + DV+SYG+ + EL+
Sbjct: 199 IKWMALESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-----ASRSFIAECRALR 322
AT + IG G++G+VYK V +K + + ++ +A R L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR-NLNL 381
+ H N+V++ C+ LV+E + + L +L DKAP L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL---------DKAPPPGLPA 111
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
++ LD+LH +C H DLKP NIL+ + DFGLAR Q
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQ 165
Query: 442 TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ V ++ Y APE L S +T D++S G + E+ R+KP
Sbjct: 166 MALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKP 209
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 276 NLIGTGSFGSVYKGV-LDEG---RTTVTVKVFNLHHHRAS-RSFIAECRALRSIRHRNLV 330
++G+G FG+V+KGV + EG + V +KV R S ++ A+ S+ H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
++ C G Q LV +++ GSL D V + L LN +
Sbjct: 79 RLLGLCPGSSLQ------LVTQYLPLGSLL---------DHVRQHRGALGPQLLLNWGVQ 123
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS 450
+A + YL H +L N+LL V DFG+A LPP Q K
Sbjct: 124 IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I ++A E + + DV+SYG+ + EL+
Sbjct: 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 276 NLIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
+IG G FG VY G L D + VK N S F+ E ++ H N++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ C + +G+ L Y M++G L ++ R + + ++L + + V
Sbjct: 114 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQV 160
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQTSSIGVKG 449
A + YL H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 161 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 217
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 29/221 (13%)
Query: 275 ANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFT 334
++G G FG K E + +K R+F+ E + +R + H N++K
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI- 73
Query: 335 ACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASA 394
GV Y+ + E+++ G+L + ++ + QR++ A D+AS
Sbjct: 74 ---GVLYKDKRLN-FITEYIKGGTLRGIIKSMDSQ---------YPWSQRVSFAKDIASG 120
Query: 395 LDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI--------- 445
+ YLH H DL N L+ E V DFGLAR + Q +
Sbjct: 121 MAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
Query: 446 ---GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIR 483
V G+ ++APE G DV+S+GI++ E+I R
Sbjct: 178 KRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 25/253 (9%)
Query: 276 NLIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
+IG G FG VY G L D + VK N S F+ E ++ H N++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ C + +G+ L Y M++G L ++ R + + ++L + + V
Sbjct: 88 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQV 134
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQTSSIGVKG 449
A + YL H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 135 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 191
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP--SDI-MFEGDMNLHNFARMALP 506
+ ++A E + +T DV+S+G+L+ EL+ R P D+ F+ + L R+ P
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 251
Query: 507 DHVMDIVDSTLLN 519
++ D + +L
Sbjct: 252 EYCPDPLYEVMLK 264
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 276 NLIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
+IG G FG VY G L D + VK N S F+ E ++ H N++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ C + +G+ L Y M++G L ++ R + + ++L + + V
Sbjct: 115 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQV 161
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQTSSIGVKG 449
A + YL H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 162 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 218
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 276 NLIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
+IG G FG VY G L D + VK N S F+ E ++ H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ C + +G+ L Y M++G L ++ R + + ++L + + V
Sbjct: 95 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQV 141
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT--SSIGVKG 449
A + YL H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 142 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL 198
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR--------ASRSFIAECR 319
AT + IG G++G+VYK V +K + + ++ +A R
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 320 ALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR-N 378
L + H N+V++ C+ LV+E + + L +L DKAP
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL---------DKAPPPG 116
Query: 379 LNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPT 438
L ++ LD+LH +C H DLKP NIL+ + DFGLAR
Sbjct: 117 LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--- 170
Query: 439 HVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
Q + V ++ Y APE L S +T D++S G + E+ R+KP
Sbjct: 171 SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKP 217
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 276 NLIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
+IG G FG VY G L D + VK N S F+ E ++ H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ C + +G+ L Y M++G L ++ R + + ++L + + V
Sbjct: 96 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQV 142
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQTSSIGVKG 449
A + YL H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 143 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 276 NLIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
+IG G FG VY G L D + VK N S F+ E ++ H N++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ C + +G+ L Y M++G L ++ R + + ++L + + V
Sbjct: 93 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQV 139
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQTSSIGVKG 449
A + YL H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 140 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 196
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-----ASRSFIAECRALR 322
AT + IG G++G+VYK V +K + + ++ +A R L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR-NLNL 381
+ H N+V++ C+ LV+E + + L +L DKAP L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL---------DKAPPPGLPA 111
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ 441
++ LD+LH +C H DLKP NIL+ + DFGLAR Q
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQ 165
Query: 442 TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ V ++ Y APE L S +T D++S G + E+ R+KP
Sbjct: 166 MALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKP 209
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 275 ANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR---SFIAECRALRSIRHRNLVK 331
+ +G G+FG V G V VK+ N R+ E + L+ RH +++K
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
++ S DF +V E++ G L +++ R +E++ L Q+ +
Sbjct: 76 LYQVIS----TPTDF-FMVMEYVSGGELFDYICKHGRVEEMEAR----RLFQQ------I 120
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSI 451
SA+DY H + + H DLKP N+LLD M + + DFGL+ + +S GS
Sbjct: 121 LSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSP 174
Query: 452 GYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSD 488
Y APE G D++S G+++ L+ P D
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 276 NLIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
+IG G FG VY G L D + VK N S F+ E ++ H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ C + +G+ L Y M++G L ++ R + + ++L + + V
Sbjct: 94 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQV 140
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQTSSIGVKG 449
A + YL H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 141 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 197
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 276 NLIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
+IG G FG VY G L D + VK N S F+ E ++ H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ C + +G+ L Y M++G L ++ R + + ++L + + V
Sbjct: 95 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQV 141
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQTSSIGVKG 449
A + YL H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 142 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 198
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 111/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 92 PFFVKLY-----FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET---------CTRFY 137
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 138 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 193
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE S + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 194 FVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 254 PEKFFPK-ARDLVEKLLVLDA 273
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 276 NLIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
+IG G FG VY G L D + VK N S F+ E ++ H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ C + +G+ L Y M++G L ++ R + + ++L + + V
Sbjct: 96 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQV 142
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQTSSIGVKG 449
A + YL H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 143 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 276 NLIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
+IG G FG VY G L D + VK N S F+ E ++ H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ C + +G+ L Y M++G L ++ R + + ++L + + V
Sbjct: 91 LLGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQV 137
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQTSSIGVKG 449
A + YL H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 138 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 194
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 278 IGTGSFGSVYKG-----VLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRNLVK 331
+G GSFG VY+G + E T V VK N R F+ E ++ ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV +G +V E M +G L+ +L + E E + L + + +A ++
Sbjct: 82 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG-- 449
A + YL+ H DL N ++ + +GDFG+ R + T G KG
Sbjct: 137 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK--GGKGLL 191
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ ++APE +T+ D++S+G+++ E+
Sbjct: 192 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 278 IGTGSFGSVYKG-----VLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRNLVK 331
+G GSFG VY+G + E T V VK N R F+ E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV +G +V E M +G L+ +L + E E + L + + +A ++
Sbjct: 85 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG-- 449
A + YL+ H DL N ++ + +GDFG+ R + T G KG
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK--GGKGLL 194
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ ++APE +T+ D++S+G+++ E+
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 275 ANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR---SFIAECRALRSIRHRNLVK 331
+ +G G+FG V G V VK+ N R+ E + L+ RH +++K
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
++ S DF +V E++ G L +++ R +E++ L Q+ +
Sbjct: 76 LYQVIS----TPTDF-FMVMEYVSGGELFDYICKHGRVEEMEAR----RLFQQ------I 120
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSI 451
SA+DY H + + H DLKP N+LLD M + + DFGL+ + S GS
Sbjct: 121 LSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSP 174
Query: 452 GYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSD 488
Y APE G D++S G+++ L+ P D
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 278 IGTGSFGSVYKG-----VLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRNLVK 331
+G GSFG VY+G + E T V VK N R F+ E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV +G +V E M +G L+ +L + E E + L + + +A ++
Sbjct: 85 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG-- 449
A + YL+ H DL N ++ + +GDFG+ R + T G KG
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK--GGKGLL 194
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ ++APE +T+ D++S+G+++ E+
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 34/222 (15%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
F+ IG GSFG V+KG+ + + V +K+ +L E + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL-----------EEAEDEIEDIQQEIT 77
Query: 332 VFTACSG---VDYQGNDFK----ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
V + C Y G+ K ++ E++ GS + L P L+ Q
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----------EPGPLDETQI 126
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
I ++ LDYLH + + H D+K +N+LL E + DFG+A L T ++ ++
Sbjct: 127 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 183
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ ++APE S + D++S GI +EL + P
Sbjct: 184 F--VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
F+ IG GSFG V+KG+ + + V +K+ +L E + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL-----------EEAEDEIEDIQQEIT 57
Query: 332 VFTACSG---VDYQGNDFK----ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
V + C Y G+ K ++ E++ GS + L P L+ Q
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----------EPGPLDETQI 106
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
I ++ LDYLH + + H D+K +N+LL E + DFG+A L T ++ ++
Sbjct: 107 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 163
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G+ ++APE S + D++S GI +EL
Sbjct: 164 FV--GTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 197
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 277 LIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVKV 332
+IG G FG VY G L D + VK N S F+ E ++ H N++ +
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
C + +G+ L Y M++G L ++ R + + ++L + + VA
Sbjct: 156 LGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQVA 202
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT--SSIGVKGS 450
+ +L H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 203 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 259
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 260 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 111 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 155
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 156 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 212
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 213 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 277 LIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVKV 332
+IG G FG VY G L D + VK N S F+ E ++ H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
C + +G+ L Y M++G L ++ R + + ++L + + VA
Sbjct: 98 LGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQVA 144
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT--SSIGVKGS 450
+ +L H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 145 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 201
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 24/224 (10%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASR-SFIAECRAL 321
A + + + +G GSFG VY+GV DE T V +K N R F+ E +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLY---PVNREDEVDKAPRN 378
+ ++V++ GV QG ++ E M G L+ +L P + V P
Sbjct: 83 KEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP-- 135
Query: 379 LNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPT 438
+L + + +A ++A + YL+ + H DL N ++ E+ +GDFG+ R + T
Sbjct: 136 -SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 439 HVQTSSIGVKG--SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G KG + +++PE +T DV+S+G+++ E+
Sbjct: 192 DYYRK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 24/224 (10%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASR-SFIAECRAL 321
A + + + +G GSFG VY+GV DE T V +K N R F+ E +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLY---PVNREDEVDKAPRN 378
+ ++V++ GV QG ++ E M G L+ +L P + V P
Sbjct: 73 KEFNCHHVVRLL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP-- 125
Query: 379 LNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPT 438
+L + + +A ++A + YL+ + H DL N ++ E+ +GDFG+ R + T
Sbjct: 126 -SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 181
Query: 439 HVQTSSIGVKG--SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G KG + +++PE +T DV+S+G+++ E+
Sbjct: 182 DYYRK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 277 LIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVKV 332
+IG G FG VY G L D + VK N S F+ E ++ H N++ +
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
C + +G+ L Y M++G L ++ R + + ++L + + VA
Sbjct: 102 LGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQVA 148
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT--SSIGVKGS 450
+ +L H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 149 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 205
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 206 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 277 LIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVKV 332
+IG G FG VY G L D + VK N S F+ E ++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
C + +G+ L Y M++G L ++ R + + ++L + + VA
Sbjct: 97 LGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQVA 143
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT--SSIGVKGS 450
+ +L H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 144 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 41/252 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR--ASRSFIAECRALRSIRHR 327
D + +G G++G VYK + TV +K L H + I E L+ ++HR
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N++++ + N L++E+ +N L++++ DK P ++++ +
Sbjct: 94 NIIELKSVI-----HHNHRLHLIFEYAEN-DLKKYM---------DKNP-DVSMRVIKSF 137
Query: 388 AIDVASALDYLH-HDCQPITTHCDLKPSNILL-----DEEMVSHVGDFGLAR-FLPPTHV 440
+ + +++ H C H DLKP N+LL E V +GDFGLAR F P
Sbjct: 138 LYQLINGVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ 193
Query: 441 QTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN 499
T I ++ Y PE LGS ST+ D++S + E+++ K P +F GD +
Sbjct: 194 FTHEI---ITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM-KTP---LFPGDSEIDQ 246
Query: 500 ----FARMALPD 507
F + LPD
Sbjct: 247 LFKIFEVLGLPD 258
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 277 LIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVKV 332
+IG G FG VY G L D + VK N S F+ E ++ H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
C + +G+ L Y M++G L ++ R + + ++L + + VA
Sbjct: 95 LGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQVA 141
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT--SSIGVKGS 450
+ +L H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 142 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 198
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 277 LIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVKV 332
+IG G FG VY G L D + VK N S F+ E ++ H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
C + +G+ L Y M++G L ++ R + + ++L + + VA
Sbjct: 98 LGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQVA 144
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT--SSIGVKGS 450
+ +L H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 145 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLP 201
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 277 LIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVKV 332
+IG G FG VY G L D + VK N S F+ E ++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
C + +G+ L Y M++G L ++ R + + ++L + + VA
Sbjct: 97 LGIC--LRSEGSPLVVLPY--MKHGDLRNFI----RNETHNPTVKDL-----IGFGLQVA 143
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT--SSIGVKGS 450
+ +L H DL N +LDE+ V DFGLAR + + + G K
Sbjct: 144 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ ++A E + +T DV+S+G+L+ EL+ R P
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 278 IGTGSFGSVYKG-----VLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRNLVK 331
+G GSFG VY+G + E T V VK N R F+ E ++ ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV +G +V E M +G L+ +L + E E + L + + +A ++
Sbjct: 84 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG-- 449
A + YL+ H DL N ++ + +GDFG+ R + T G KG
Sbjct: 139 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK--GGKGLL 193
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ ++APE +T+ D++S+G+++ E+
Sbjct: 194 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 90 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 135
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 136 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANA 191
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 252 PEKFFPK-ARDLVEKLLVLDA 271
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 18/220 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLV 330
+ +GTG FG V + + + V +K +R + E + ++ + H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 331 KVFTACSGVDYQG-NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
G+ ND L E+ + G L ++L + + P +
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-------TLLS 129
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIG 446
D++SAL YLH + H DLKP NI+L + ++ + D G A+ L + T +G
Sbjct: 130 DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG 186
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
++ Y+APE + + D +S+G L E I +P
Sbjct: 187 ---TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
F+ IG GSFG V+KG+ + + V +K+ +L E + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL-----------EEAEDEIEDIQQEIT 57
Query: 332 VFTACSG---VDYQGNDFK----ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
V + C Y G+ K ++ E++ GS + L P L+ Q
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----------EPGPLDETQI 106
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
I ++ LDYLH + + H D+K +N+LL E + DFG+A L T ++ +
Sbjct: 107 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX 163
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G+ ++APE S + D++S GI +EL
Sbjct: 164 FV--GTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 197
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 70 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 115
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 116 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 171
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 172 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 231
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 232 PEKFFPK-ARDLVEKLLVLDA 251
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 68 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 113
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 114 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 169
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 229
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 230 PEKFFPK-ARDLVEKLLVLDA 249
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 278 IGTGSFGSVYKG-----VLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRNLVK 331
+G GSFG VY+G + E T V VK N R F+ E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV +G +V E M +G L+ +L + E E + L + + +A ++
Sbjct: 85 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG-- 449
A + YL+ H DL N ++ + +GDFG+ R + T G KG
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK--GGKGLL 194
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ ++APE +T+ D++S+G+++ E+
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
F+ IG GSFG V+KG+ + + V +K+ +L E + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL-----------EEAEDEIEDIQQEIT 72
Query: 332 VFTACSG---VDYQGNDFK----ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
V + C Y G+ K ++ E++ GS + L P L+ Q
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----------EPGPLDETQI 121
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
I ++ LDYLH + + H D+K +N+LL E + DFG+A L T ++ +
Sbjct: 122 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX 178
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G+ ++APE S + D++S GI +EL
Sbjct: 179 FV--GTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 212
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 67 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 112
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 113 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 168
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 169 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 228
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 229 PEKFFPK-ARDLVEKLLVLDA 248
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 18/220 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLV 330
+ +GTG FG V + + + V +K +R + E + ++ + H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 331 KVFTACSGVDYQG-NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
G+ ND L E+ + G L ++L + + P +
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-------TLLS 128
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIG 446
D++SAL YLH + H DLKP NI+L + ++ + D G A+ L + T +G
Sbjct: 129 DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG 185
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
++ Y+APE + + D +S+G L E I +P
Sbjct: 186 ---TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 278 IGTGSFGSVYKG-----VLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRNLVK 331
+G GSFG VY+G + E T V VK N R F+ E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV +G +V E M +G L+ +L + E E + L + + +A ++
Sbjct: 85 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG-- 449
A + YL+ H DL N ++ + +GDFG+ R + T G KG
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRK--GGKGLL 194
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ ++APE +T+ D++S+G+++ E+
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 93 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 138
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 139 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 194
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 195 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 254
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 255 PEKFFPK-ARDLVEKLLVLDA 274
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 69 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 114
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 115 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 170
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 171 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 230
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 231 PEKFFPK-ARDLVEKLLVLDA 250
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVK-VFNLHHHRASRSFIAECRALRSIRHRNLVKVFTAC 336
IG G+FG V+ G L T V VK F+ E R L+ H N+V++ C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
+ Q +V E +Q G +L + A L + L + D A+ ++
Sbjct: 182 T----QKQPI-YIVMELVQGGDFLTFL-------RTEGA--RLRVKTLLQMVGDAAAGME 227
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG-SIGYIA 455
YL C H DL N L+ E+ V + DFG++R V +S G++ + + A
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTA 283
Query: 456 PEYGLGSEVSTNGDVYSYGILMLE 479
PE S+ DV+S+GIL+ E
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWE 307
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 80 PHVCRLLGICLTSTVQ------LIMQLMPFGCLL---------DYVREHKDNIGSQYLLN 124
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 125 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 92 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 137
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 138 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 254 PEKFFPK-ARDLVEKLLVLDA 273
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 121
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 122 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 92 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 137
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 138 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 254 PEKFFPK-ARDLVEKLLVLDA 273
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 89 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 134
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 135 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 190
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 191 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 250
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 251 PEKFFPK-ARDLVEKLLVLDA 270
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G+FG V D+ + VTV V L + ++E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V E+ G+L E+L Y +NR
Sbjct: 95 KMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEXSYDINRV 149
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 150 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIAD 200
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + + + + ++APE + DV+S+G+LM E+
Sbjct: 201 FGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLL---------DYVREHKDNIGSQYLLN 123
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 124 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK ++ + F+ E + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 113 ----CIGVSLQSLP-RFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 163
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR + +S
Sbjct: 164 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYR 215
Query: 448 KG-----SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
KG + ++ PE + ++ D +S+G+L+ E+
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 81 PHVCRLLGICLTSTVQ------LIMQLMPFGCLL---------DYVREHKDNIGSQYLLN 125
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 126 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 182
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSF---IAECRALRSIRHRN 328
FS IG GSFG+VY V +K + +++ + I E R L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
++ + C Y LV E+ GS + L EV K P LQ + IA
Sbjct: 116 TIQ-YRGC----YLREHTAWLVMEYCL-GSASDLL-------EVHKKP-----LQEVEIA 157
Query: 389 IDVASALD---YLH-HDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
AL YLH H+ H D+K NILL E + +GDFG A + P +
Sbjct: 158 AVTHGALQGLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX---- 209
Query: 445 IGVKGSIGYIAPEYGLG-SEVSTNG--DVYSYGILMLELIIRKKP 486
G+ ++APE L E +G DV+S GI +EL RK P
Sbjct: 210 --FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 90 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 135
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 136 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 252 PEKFFPK-ARDLVEKLLVLDA 271
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 78 PHVCRLLGICLTSTVQ------LIMQLMPFGCLL---------DYVREHKDNIGSQYLLN 122
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 123 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 77 PHVCRLLGICLTSTVQ------LIMQLMPFGCLL---------DYVREHKDNIGSQYLLN 121
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 122 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVK-VFNLHHHRASRSFIAECRALRSIRHRNLVKVFTAC 336
IG G+FG V+ G L T V VK F+ E R L+ H N+V++ C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
+ Q +V E +Q G +L + A + L L + D A+ ++
Sbjct: 182 T----QKQPI-YIVMELVQGGDFLTFL-------RTEGARLRVKTL--LQMVGDAAAGME 227
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG-SIGYIA 455
YL C H DL N L+ E+ V + DFG++R V +S G++ + + A
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTA 283
Query: 456 PEYGLGSEVSTNGDVYSYGILMLE 479
PE S+ DV+S+GIL+ E
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWE 307
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 27/212 (12%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVKV 332
+G G FG V Y D V VK RS + E LR++ H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRN-LNLLQRLNIAIDV 391
C QG LV E++ GSL ++L PR+ + L Q L A +
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYL------------PRHSIGLAQLLLFAQQI 126
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS- 450
+ YLH H +L N+LLD + + +GDFGLA+ +P H + + G
Sbjct: 127 CEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH-EYYRVREDGDS 182
Query: 451 -IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + APE + DV+S+G+ + EL+
Sbjct: 183 PVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 78 PHVCRLLGICLTSTVQ------LIMQLMPFGXLL---------DYVREHKDNIGSQYLLN 122
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 123 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G+FG V D+ + VTV V L + ++E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V E+ G+L E+L Y +NR
Sbjct: 95 KMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 150 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIAD 200
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + + + + ++APE + DV+S+G+LM E+
Sbjct: 201 FGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 90 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 135
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 136 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 252 PEKFFPK-ARDLVEKLLVLDA 271
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 92 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 137
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 138 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 254 PEKFFPK-ARDLVEKLLVLDA 273
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
F+ IG GSFG V+KG+ + + V +K+ +L E + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL-----------EEAEDEIEDIQQEIT 73
Query: 332 VFTACSG---VDYQGNDFKA----LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
V + C Y G+ K ++ E++ GS + L R D+ Q
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL----RAGPFDE-------FQI 122
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
+ ++ LDYLH + + H D+K +N+LL E+ + DFG+A L T ++ ++
Sbjct: 123 ATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 179
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIM 490
G+ ++APE S + D++S GI +EL + P+ M
Sbjct: 180 F--VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 128
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 129 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 93 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 138
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 139 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 194
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 195 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 254
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 255 PEKFFPK-ARDLVEKLLVLDA 274
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 27/212 (12%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVKV 332
+G G FG V Y D V VK RS + E LR++ H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRN-LNLLQRLNIAIDV 391
C QG LV E++ GSL ++L PR+ + L Q L A +
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYL------------PRHSIGLAQLLLFAQQI 126
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS- 450
+ YLH H +L N+LLD + + +GDFGLA+ +P H + + G
Sbjct: 127 CEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH-EYYRVREDGDS 182
Query: 451 -IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + APE + DV+S+G+ + EL+
Sbjct: 183 PVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 89 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 134
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 135 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 190
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 191 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 250
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 251 PEKFFPK-ARDLVEKLLVLDA 270
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 124
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 125 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 124
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 125 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 79 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 123
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 124 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 124
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 125 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 121
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 122 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 95 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 140
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 141 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 196
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 197 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 256
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 257 PAAFFPK-ARDLVEKLLVLDA 276
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 74 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 119
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 120 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 175
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 176 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 235
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 236 PEKFFPK-ARDLVEKLLVLDA 255
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 74 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 118
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 119 WCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 175
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 176 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 87 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 131
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 132 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 188
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 189 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGXLL---------DYVREHKDNIGSQYLLN 121
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 122 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVKV 332
+G G FG V Y D V VK RS + E LR++ H +++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRN-LNLLQRLNIAIDV 391
C G LV E++ GSL ++L PR+ + L Q L A +
Sbjct: 99 KGCCEDA---GAASLQLVMEYVPLGSLRDYL------------PRHSIGLAQLLLFAQQI 143
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS- 450
+ YLH H DL N+LLD + + +GDFGLA+ +P H + + G
Sbjct: 144 CEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH-EXYRVREDGDS 199
Query: 451 -IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + APE + DV+S+G+ + EL+
Sbjct: 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 102 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 146
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 147 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 203
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 204 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 13/218 (5%)
Query: 272 FSSANLIGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRAS--RSFIAECRALRSIRH 326
F+ ++G G FGSV + L D V VK+ +S F+ E ++ H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 327 RNLVKVFTACSGVDYQGN-DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
++ K+ +G ++ FM++G L +L + + P NL L +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA----SRIGENPFNLPLQTLV 140
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+D+A ++YL H DL N +L E+M V DFGL+R +
Sbjct: 141 RFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIR 483
K + ++A E + + + DV+++G+ M E++ R
Sbjct: 198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 83 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 127
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 128 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 184
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 185 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G+FG V D+ + VTV V L + ++E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V E+ G+L E+L Y +NR
Sbjct: 95 KMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 150 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIAD 200
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + + + + ++APE + DV+S+G+LM E+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 97 PFFVKLYFC-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 142
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 143 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 198
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 199 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 258
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 259 PEKFFPK-ARDLVEKLLVLDA 278
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSF---IAECRALRSIRHRN 328
FS IG GSFG+VY V +K + +++ + I E R L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
++ + C Y LV E+ GS + L EV K P LQ + IA
Sbjct: 77 TIQ-YRGC----YLREHTAWLVMEYCL-GSASDLL-------EVHKKP-----LQEVEIA 118
Query: 389 IDVASALD---YLH-HDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
AL YLH H+ H D+K NILL E + +GDFG A + P +
Sbjct: 119 AVTHGALQGLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX---- 170
Query: 445 IGVKGSIGYIAPEYGLG-SEVSTNG--DVYSYGILMLELIIRKKP 486
G+ ++APE L E +G DV+S GI +EL RK P
Sbjct: 171 --FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G+FG V D+ + VTV V L + ++E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V E+ G+L E+L Y +NR
Sbjct: 95 KMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 150 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIAD 200
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + ++ + + ++APE + DV+S+G+LM E+
Sbjct: 201 FGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 92 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 137
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 138 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F + L ++F
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF 253
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 254 PEKFFPK-ARDLVEKLLVLDA 273
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G+FG V D+ + VTV V L + ++E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V E+ G+L E+L Y +NR
Sbjct: 95 KMIGKHKNIITLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 150 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIAD 200
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + + + + ++APE + DV+S+G+LM E+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 71 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 115
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 116 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 172
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF +V +K+ H ++ R + S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 92 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 137
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 138 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F + L ++F
Sbjct: 194 FVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF 253
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 254 PEKFFPK-ARDLVEKLLVLDA 273
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEGRTTV--TVKVFNLHHHRASRSFIAECRALRSIRHRN 328
F IG G F VY+ L +G V++F+L +A I E L+ + H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
++K + + + N+ +V E G L + K R +
Sbjct: 94 VIKYYASF----IEDNELN-IVLELADAGDLSRMI------KHFKKQKRLIPERTVWKYF 142
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
+ + SAL+++H H D+KP+N+ + V +GD GL RF + T++ +
Sbjct: 143 VQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLV 197
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD-MNLHNFAR 502
G+ Y++PE + + D++S G L+ E+ + P F GD MNL++ +
Sbjct: 198 GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP----FYGDKMNLYSLCK 248
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G+FG V D+ + VTV V L + ++E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V E+ G+L E+L Y +NR
Sbjct: 95 KMIGKHKNIIHLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 150 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIAD 200
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + + + + ++APE + DV+S+G+LM E+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G FG V D+ + VTV V L + ++E +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V E+ G+L E+L Y +NR
Sbjct: 141 KMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRV 195
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 196 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIAD 246
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + + + + ++APE + DV+S+G+LM E+
Sbjct: 247 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 299
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 113 ----CIGVSLQSLP-RFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 163
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR + +S
Sbjct: 164 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYR 215
Query: 448 KG-----SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
KG + ++ PE + ++ D +S+G+L+ E+
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 98 ----CIGVSLQSLP-RFILMELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 148
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR + +S
Sbjct: 149 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYR 200
Query: 448 KG-----SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
KG + ++ PE + ++ D +S+G+L+ E+
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 149
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR + +S
Sbjct: 150 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYR 201
Query: 448 KG-----SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
KG + ++ PE + ++ D +S+G+L+ E+
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 112/257 (43%), Gaps = 24/257 (9%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNRE--DEVDKAPRNLNLLQRLNIA 388
+ AC+ G +V EF + G+L +L E D L L + +
Sbjct: 95 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQTSSIG 446
VA +++L H DL NILL E+ V + DFGLAR + P +V+
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD-- 205
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLHNFAR 502
+ + ++APE + DV+S+G+L+ E+ + P I E L R
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTR 265
Query: 503 MALPDHVMDIVDSTLLN 519
M PD+ + T+L+
Sbjct: 266 MRAPDYTTPEMYQTMLD 282
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G FG V D+ + VTV V L + ++E +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V E+ G+L E+L Y +NR
Sbjct: 84 KMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRV 138
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 139 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIAD 189
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + + + + ++APE + DV+S+G+LM E+
Sbjct: 190 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 242
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G FG V D+ + VTV V L + ++E +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V E+ G+L E+L Y +NR
Sbjct: 87 KMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRV 141
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 142 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIAD 192
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + + + + ++APE + DV+S+G+LM E+
Sbjct: 193 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 245
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + H+N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 90 ----CIGVSLQSLP-RFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 140
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR + +S
Sbjct: 141 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYR 192
Query: 448 KG-----SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
KG + ++ PE + ++ D +S+G+L+ E+
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 231
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 23/258 (8%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNL-----NLLQRL 385
+ AC+ G +V EF + G+L +L E K P +L L +
Sbjct: 96 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ VA +++L H DL NILL E+ V + DFGLAR +
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLHNFA 501
+ + ++APE + DV+S+G+L+ E+ + P I E L
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 502 RMALPDHVMDIVDSTLLN 519
RM PD+ + T+L+
Sbjct: 269 RMRAPDYTTPEMYQTMLD 286
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G FG V D+ + VTV V L + ++E +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V E+ G+L E+L Y +NR
Sbjct: 82 KMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRV 136
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 137 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIAD 187
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + + + + ++APE + DV+S+G+LM E+
Sbjct: 188 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 113 ----CIGVSLQSLP-RFILMELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 163
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR + +S
Sbjct: 164 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYR 215
Query: 448 KG-----SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
KG + ++ PE + ++ D +S+G+L+ E+
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 28/261 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRS-IRH 326
+ F ++G GSF + +K+ H ++ R + S + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
VK++ +Q ++ + +NG L +++ + DE R
Sbjct: 90 PFFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------CTRFY 135
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL+YLH H DLKP NILL+E+M + DFG A+ L P Q +
Sbjct: 136 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-----IRKKPSDIMFEGDMNL-HNF 500
G+ Y++PE + D+++ G ++ +L+ R ++F+ + L ++F
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 501 ARMALPDHVMDIVDSTLLNDV 521
P D+V+ L+ D
Sbjct: 252 PEKFFPK-ARDLVEKLLVLDA 271
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + H+N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 115 ----CIGVSLQSLP-RFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 165
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR + +S
Sbjct: 166 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYR 217
Query: 448 KG-----SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
KG + ++ PE + ++ D +S+G+L+ E+
Sbjct: 218 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 256
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 98 ----CIGVSLQSLP-RFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 148
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR + +S
Sbjct: 149 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYR 200
Query: 448 KG-----SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
KG + ++ PE + ++ D +S+G+L+ E+
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 278 IGTGSFGSVYKG-----VLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRNLVK 331
+G GSFG VY+G + E T V VK N R F+ E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV +G +V E M +G L+ +L + E E + L + + +A ++
Sbjct: 85 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG-- 449
A + YL+ H +L N ++ + +GDFG+ R + T G KG
Sbjct: 140 ADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK--GGKGLL 194
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ ++APE +T+ D++S+G+++ E+
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 278 IGTGSFGSVYKG-----VLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRNLVK 331
+G GSFG VY+G + E T V VK N R F+ E ++ ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ GV +G +V E M +G L+ +L + E E + L + + +A ++
Sbjct: 86 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG-- 449
A + YL+ H +L N ++ + +GDFG+ R + T G KG
Sbjct: 141 ADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK--GGKGLL 195
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ ++APE +T+ D++S+G+++ E+
Sbjct: 196 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 281 GSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVD 340
G FG V+K L V VK+F L ++ +S E + ++H NL++ A +
Sbjct: 26 GRFGCVWKAQL--MNDFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAA----E 78
Query: 341 YQGNDFKA---LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL-NIAIDVASALD 396
+G++ + L+ F GSL ++L N+ L ++A ++ L
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYL------------KGNIITWNELCHVAETMSRGLS 126
Query: 397 YLHHDC--------QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
YLH D +P H D K N+LL ++ + + DFGLA P + G
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV 186
Query: 449 GSIGYIAPEYGLGS-----EVSTNGDVYSYGILMLELIIRKKPSD 488
G+ Y+APE G+ + D+Y+ G+++ EL+ R K +D
Sbjct: 187 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G+FG V D+ + VTV V L ++E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V E+ G+L E+L Y +NR
Sbjct: 95 KMIGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 150 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIAD 200
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + + + + ++APE + DV+S+G+LM E+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 29/199 (14%)
Query: 286 VYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345
+ K D+GR + K H E L+S+ H N++K+F ++
Sbjct: 69 IKKSQFDKGRYSDDNKNIEKFHE----EIYNEISLLKSLDHPNIIKLFDV-----FEDKK 119
Query: 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPI 405
+ LV EF + G L E + ++ DE D A NI + S + YLH +
Sbjct: 120 YFYLVTEFYEGGELFEQIINRHKFDECDAA----------NIMKQILSGICYLH---KHN 166
Query: 406 TTHCDLKPSNILLDEE---MVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS 462
H D+KP NILL+ + + + DFGL+ F + + G+ YIAPE L
Sbjct: 167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL---GTAYYIAPEV-LKK 222
Query: 463 EVSTNGDVYSYGILMLELI 481
+ + DV+S G++M L+
Sbjct: 223 KYNEKCDVWSCGVIMYILL 241
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
F+ + IG GSFG VYKG+ + + V +K+ +L E + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDL-----------EEAEDEIEDIQQEIT 69
Query: 332 VFTACSG---VDYQGNDFKA----LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
V + C Y G+ K+ ++ E++ GS + L P E+
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETY-----------I 118
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
I ++ LDYLH + + H D+K +N+LL E+ + DFG+A L T ++ +
Sbjct: 119 ATILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX 175
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
G+ ++APE S D++S GI +EL
Sbjct: 176 FV--GTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 209
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 149
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR + +S
Sbjct: 150 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYR 201
Query: 448 KG-----SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
KG + ++ PE + ++ D +S+G+L+ E+
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 25/178 (14%)
Query: 312 RSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLY---PVNR 368
+ F E + H+N+V + VD + +D LV E+++ +L E++ P++
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMI----DVD-EEDDCYYLVMEYIEGPTLSEYIESHGPLS- 109
Query: 369 EDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
VD A +N ++ LD + H H D+KP NIL+D + D
Sbjct: 110 ---VDTA---INFTNQI---------LDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFD 154
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
FG+A+ L T + T + V G++ Y +PE G D+YS GI++ E+++ + P
Sbjct: 155 FGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN---LHHHRASRSFIAECRALRSIRHRN 328
+ +G GSFG V V +K+ N L E LR +RH +
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
++K++ + D +V E+ N E + Y V R+ ++ R Q+
Sbjct: 76 IIKLYDVI-----KSKDEIIMVIEYAGN---ELFDYIVQRDKMSEQEARRF--FQQ---- 121
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
+ SA++Y H + H DLKP N+LLDE + + DFGL+ + + +S
Sbjct: 122 --IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--- 173
Query: 449 GSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSD 488
GS Y APE G DV+S G+++ ++ R+ P D
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + H+N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 105 ----CIGVSLQSLP-RFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 155
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR + +S
Sbjct: 156 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYR 207
Query: 448 KG-----SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
KG + ++ PE + ++ D +S+G+L+ E+
Sbjct: 208 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 246
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 28/261 (10%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHR-NLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDK-APRNL-----NLLQR 384
+ AC+ G +V EF + G+L +L E K AP +L L
Sbjct: 132 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQT 442
+ + VA +++L H DL NILL E+ V + DFGLAR + P +V+
Sbjct: 188 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLH 498
+ + ++APE + DV+S+G+L+ E+ + P I E L
Sbjct: 245 GD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 302
Query: 499 NFARMALPDHVMDIVDSTLLN 519
RM PD+ + T+L+
Sbjct: 303 EGTRMRAPDYTTPEMYQTMLD 323
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN---LHHHRASRSFIAECRALRSIRHRN 328
+ +G GSFG V V +K+ N L E LR +RH +
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
++K++ + D +V E+ N E + Y V R+ ++ R Q+
Sbjct: 75 IIKLYDVI-----KSKDEIIMVIEYAGN---ELFDYIVQRDKMSEQEARRF--FQQ---- 120
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
+ SA++Y H + H DLKP N+LLDE + + DFGL+ + + +S
Sbjct: 121 --IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--- 172
Query: 449 GSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSD 488
GS Y APE G DV+S G+++ ++ R+ P D
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN---LHHHRASRSFIAECRALRSIRHRN 328
+ +G GSFG V V +K+ N L E LR +RH +
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
++K++ + D +V E+ N E + Y V R+ ++ R Q+
Sbjct: 70 IIKLYDVI-----KSKDEIIMVIEYAGN---ELFDYIVQRDKMSEQEARRF--FQQ---- 115
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
+ SA++Y H + H DLKP N+LLDE + + DFGL+ + + +S
Sbjct: 116 --IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--- 167
Query: 449 GSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSD 488
GS Y APE G DV+S G+++ ++ R+ P D
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 27/243 (11%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGV-LDEGRTTVTVKVFNLHHHRASRSF-----IAECRAL 321
A + IG G++G V+K L G V +K + +A R L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ H N+V++F C+ LV+E + + L +L DK P
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---------DKVPEPGVP 118
Query: 382 LQRL-NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHV 440
+ + ++ + LD+LH H DLKP NIL+ + DFGLAR
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SF 172
Query: 441 QTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNF 500
Q + V ++ Y APE L S +T D++S G + E+ R+KP +F G ++
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM-FRRKP---LFRGSSDVDQL 228
Query: 501 ARM 503
++
Sbjct: 229 GKI 231
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN---LHHHRASRSFIAECRALRSIRHRN 328
+ +G GSFG V V +K+ N L E LR +RH +
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
++K++ + D +V E+ N E + Y V R+ ++ R Q+
Sbjct: 66 IIKLYDVI-----KSKDEIIMVIEYAGN---ELFDYIVQRDKMSEQEARRF--FQQ---- 111
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
+ SA++Y H + H DLKP N+LLDE + + DFGL+ + + +S
Sbjct: 112 --IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--- 163
Query: 449 GSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSD 488
GS Y APE G DV+S G+++ ++ R+ P D
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 28/261 (10%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHR-NLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNRED-EVDKAPRNL-----NLLQR 384
+ AC+ G +V EF + G+L +L E +AP +L L
Sbjct: 97 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQT 442
+ + VA +++L H DL NILL E+ V + DFGLAR + P +V+
Sbjct: 153 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLH 498
+ + ++APE + DV+S+G+L+ E+ + P I E L
Sbjct: 210 GD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 267
Query: 499 NFARMALPDHVMDIVDSTLLN 519
RM PD+ + T+L+
Sbjct: 268 EGTRMRAPDYTTPEMYQTMLD 288
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLL---------DYVREHKDNIGSQYLLN 123
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFG A+ L + + G
Sbjct: 124 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + H+N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 125 ----CIGVSLQSLP-RFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 175
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR + +S
Sbjct: 176 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYR 227
Query: 448 KG-----SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
KG + ++ PE + ++ D +S+G+L+ E+
Sbjct: 228 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 266
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLL---------DYVREHKDNIGSQYLLN 123
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFG A+ L + + G
Sbjct: 124 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 27/243 (11%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGV-LDEGRTTVTVKVFNLHHHRASRSF-----IAECRAL 321
A + IG G++G V+K L G V +K + +A R L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ H N+V++F C+ LV+E + + L +L DK P
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---------DKVPEPGVP 118
Query: 382 LQRL-NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHV 440
+ + ++ + LD+LH H DLKP NIL+ + DFGLAR
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SF 172
Query: 441 QTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNF 500
Q + V ++ Y APE L S +T D++S G + E+ R+KP +F G ++
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM-FRRKP---LFRGSSDVDQL 228
Query: 501 ARM 503
++
Sbjct: 229 GKI 231
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 81 PHVCRLLGICLTSTVQ------LIMQLMPFGCLL---------DYVREHKDNIGSQYLLN 125
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFG A+ L + + G
Sbjct: 126 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 182
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 27/243 (11%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGV-LDEGRTTVTVKVFNLHHHRASRSF-----IAECRAL 321
A + IG G++G V+K L G V +K + +A R L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ H N+V++F C+ LV+E + + L +L DK P
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---------DKVPEPGVP 118
Query: 382 LQRL-NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHV 440
+ + ++ + LD+LH H DLKP NIL+ + DFGLAR
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SF 172
Query: 441 QTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNF 500
Q + V ++ Y APE L S +T D++S G + E+ R+KP +F G ++
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM-FRRKP---LFRGSSDVDQL 228
Query: 501 ARM 503
++
Sbjct: 229 GKI 231
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 111/258 (43%), Gaps = 24/258 (9%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHR-NLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNL-----NLLQRL 385
+ AC+ G +V EF + G+L +L R + V P +L L +
Sbjct: 97 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLR-SKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ VA +++L H DL NILL E+ V + DFGLAR +
Sbjct: 152 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLHNFA 501
+ + ++APE + DV+S+G+L+ E+ + P I E L
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 502 RMALPDHVMDIVDSTLLN 519
RM PD+ + T+L+
Sbjct: 269 RMRAPDYTTPEMYQTMLD 286
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVKV 332
+G G FG V Y D V VK RS + E LR++ H ++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRN-LNLLQRLNIAIDV 391
C QG LV E++ GSL ++L PR+ + L Q L A +
Sbjct: 76 KGCCED---QGEKSVQLVMEYVPLGSLRDYL------------PRHCVGLAQLLLFAQQI 120
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS- 450
+ YLH H L N+LLD + + +GDFGLA+ +P H + + G
Sbjct: 121 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH-EYYRVREDGDS 176
Query: 451 -IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + APE + DV+S+G+ + EL+
Sbjct: 177 PVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 38/240 (15%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS-------RSFIAECRALRSIRHRNLV 330
IG G FG V+KG L + ++ V +K L + F E + ++ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
K++ ++ +V EF+ G L L +DKA + +L + +D
Sbjct: 87 KLYGLM-------HNPPRMVMEFVPCGDLYHRL--------LDKA-HPIKWSVKLRLMLD 130
Query: 391 VASALDYLHHDCQPITTHCDLKPSNIL---LDEE--MVSHVGDFGLARFLPPTHVQTSSI 445
+A ++Y+ + PI H DL+ NI LDE + + V DFGL++ V + S
Sbjct: 131 IALGIEYMQNQNPPI-VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVS- 184
Query: 446 GVKGSIGYIAPEYGLGSE---VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
G+ G+ ++APE +G+E + D YS+ +++ ++ + P D G + N R
Sbjct: 185 GLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++ +G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 84 PHVCRLLGICLTSTVQ------LIMQLMPFGCLL---------DYVREHKDNIGSQYLLN 128
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 129 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 128
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFG A+ L + + G
Sbjct: 129 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 185
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 28/261 (10%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDK-APRNL-----NLLQR 384
+ AC+ G +V EF + G+L +L E K AP +L L
Sbjct: 95 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQT 442
+ + VA +++L H DL NILL E+ V + DFGLAR + P +V+
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLH 498
+ + ++APE + DV+S+G+L+ E+ + P I E L
Sbjct: 208 GD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
Query: 499 NFARMALPDHVMDIVDSTLLN 519
RM PD+ + T+L+
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLD 286
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVKV 332
+G G FG V Y D V VK RS + E LR++ H ++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRN-LNLLQRLNIAIDV 391
C QG LV E++ GSL ++L PR+ + L Q L A +
Sbjct: 77 KGCCED---QGEKSVQLVMEYVPLGSLRDYL------------PRHCVGLAQLLLFAQQI 121
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS- 450
+ YLH H L N+LLD + + +GDFGLA+ +P H + + G
Sbjct: 122 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH-EYYRVREDGDS 177
Query: 451 -IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + APE + DV+S+G+ + EL+
Sbjct: 178 PVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRASRSFIAECRALRSIRHRN 328
+ + +G G++G VYK +GR ++ + + I E L+ + H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V + LV+EFM+ L++ L DE N LQ I
Sbjct: 81 IVSLIDVI-----HSERCLTLVFEFMEK-DLKKVL------DE------NKTGLQDSQIK 122
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSIGV 447
I + L + H Q H DLKP N+L++ + + DFGLAR F P T +
Sbjct: 123 IYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV-- 180
Query: 448 KGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRK 484
++ Y AP+ +GS + ST+ D++S G + E+I K
Sbjct: 181 -VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 121
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFG A+ L + + G
Sbjct: 122 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 178
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++ +G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 128
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 129 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++G+G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 79 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 123
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFG A+ L + + G
Sbjct: 124 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRASRSFIAECRALRSIRHRN 328
+ + +G G++G VYK +GR ++ + + I E L+ + H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V + LV+EFM+ L++ L DE N LQ I
Sbjct: 81 IVSLIDVI-----HSERCLTLVFEFMEK-DLKKVL------DE------NKTGLQDSQIK 122
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSIGV 447
I + L + H Q H DLKP N+L++ + + DFGLAR F P T +
Sbjct: 123 IYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV-- 180
Query: 448 KGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRK 484
++ Y AP+ +GS + ST+ D++S G + E+I K
Sbjct: 181 -VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 272 FSSANLIGTGSFGSVYKGV-LDEG-RTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
F ++ +G+FG+VYKG+ + EG + + V + L +A++ + E + S+ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++ ++ C Q L+ + M G L D V + N+ LN
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLL---------DYVREHKDNIGSQYLLN 121
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ +A ++YL H DL N+L+ + DFGLA+ L + + G
Sbjct: 122 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
K I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 25/217 (11%)
Query: 276 NLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR---SFIAECRALRSIRHRNLVKV 332
+ +G G+FG V G + V VK+ N R+ E + L+ RH +++K+
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
+ S + F +V E++ G L +++ R DE + + L Q+ +
Sbjct: 82 YQVIST---PSDIF--MVMEYVSGGELFDYICKNGRLDEKE----SRRLFQQ------IL 126
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIG 452
S +DY H + + H DLKP N+LLD M + + DFGL+ + S GS
Sbjct: 127 SGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPN 180
Query: 453 YIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSD 488
Y APE G D++S G+++ L+ P D
Sbjct: 181 YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 112/257 (43%), Gaps = 24/257 (9%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNRE--DEVDKAPRNLNLLQRLNIA 388
+ AC+ G +V EF + G+L +L E D L L + +
Sbjct: 95 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQTSSIG 446
VA +++L H DL NILL E+ V + DFGLAR + P +V+
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-- 205
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLHNFAR 502
+ + ++APE + DV+S+G+L+ E+ + P I E L R
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 265
Query: 503 MALPDHVMDIVDSTLLN 519
M PD+ + T+L+
Sbjct: 266 MRAPDYTTPEMYQTMLD 282
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + H+N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 139 ----CIGVSLQSLP-RFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 189
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR +
Sbjct: 190 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 246
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ ++ PE + ++ D +S+G+L+ E+
Sbjct: 247 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G+FG V D+ + VTV V L + ++E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V + G+L E+L Y +NR
Sbjct: 95 KMIGKHKNIINLLGACT----QDGPLYVIV-AYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 150 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIAD 200
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + + + + ++APE + DV+S+G+LM E+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 28/224 (12%)
Query: 278 IGTGSFGSVYK----GVLD-EGRTTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
IG G+FG V++ G+L E T V VK+ ++ F E + + N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVN--------------REDEVDKAPR 377
+ C+ G L++E+M G L E+L ++ R P
Sbjct: 115 LLGVCA----VGKPM-CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
L+ ++L IA VA+ + YL + H DL N L+ E MV + DFGL+R +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ I ++ PE + +T DV++YG+++ E+
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTH 408
LV M G + +Y V+ ++ + PR + + + S L++LH Q +
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ------IVSGLEHLH---QRNIIY 312
Query: 409 CDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNG 468
DLKP N+LLD++ + D GLA L QT + G G+ G++APE LG E +
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSV 370
Query: 469 DVYSYGILMLELIIRKKP 486
D ++ G+ + E+I + P
Sbjct: 371 DYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTH 408
LV M G + +Y V+ ++ + PR + + + S L++LH Q +
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ------IVSGLEHLH---QRNIIY 312
Query: 409 CDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNG 468
DLKP N+LLD++ + D GLA L QT + G G+ G++APE LG E +
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSV 370
Query: 469 DVYSYGILMLELIIRKKP 486
D ++ G+ + E+I + P
Sbjct: 371 DYFALGVTLYEMIAARGP 388
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + H+N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 116 ----CIGVSLQSLP-RFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 166
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+AR +
Sbjct: 167 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 223
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ ++ PE + ++ D +S+G+L+ E+
Sbjct: 224 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 257
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTH 408
LV M G + +Y V+ ++ + PR + + + S L++LH Q +
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ------IVSGLEHLH---QRNIIY 312
Query: 409 CDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNG 468
DLKP N+LLD++ + D GLA L QT + G G+ G++APE LG E +
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSV 370
Query: 469 DVYSYGILMLELIIRKKP 486
D ++ G+ + E+I + P
Sbjct: 371 DYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTH 408
LV M G + +Y V+ ++ + PR + + + S L++LH Q +
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ------IVSGLEHLH---QRNIIY 312
Query: 409 CDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNG 468
DLKP N+LLD++ + D GLA L QT + G G+ G++APE LG E +
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSV 370
Query: 469 DVYSYGILMLELIIRKKP 486
D ++ G+ + E+I + P
Sbjct: 371 DYFALGVTLYEMIAARGP 388
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 28/209 (13%)
Query: 284 GSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQG 343
G ++KG V V R SR F EC LR H N++ V AC
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS---PP 80
Query: 344 NDFKALVYEFMQNGSLEEWLYPVNREDE---VDKAPRNLNLLQRLNIAIDVASALDYLHH 400
L+ +M GS LY V E VD++ Q + A+D+A + +L H
Sbjct: 81 APHPTLITHWMPYGS----LYNVLHEGTNFVVDQS-------QAVKFALDMARGMAFL-H 128
Query: 401 DCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL 460
+P+ L ++++DE+M + + + S G + ++APE
Sbjct: 129 TLEPLIPRHALNSRSVMIDEDMTARIS-------MADVKFSFQSPGRMYAPAWVAPEALQ 181
Query: 461 GSEVSTN---GDVYSYGILMLELIIRKKP 486
TN D++S+ +L+ EL+ R+ P
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVK 331
+G G+FG VY+G + D V VK + + F+ E + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA-PRNLNLLQRLNIAID 390
C GV Q + ++ E M G L+ +L RE + P +L +L L++A D
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFL----RETRPRPSQPSSLAMLDLLHVARD 149
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+A YL + H D+ N LL V+ +GDFG+A+ + +S
Sbjct: 150 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ-----DIYRASYYR 201
Query: 448 KG-----SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
KG + ++ PE + ++ D +S+G+L+ E+
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSIRH 326
D F IG GSFG V ++ + +K N R+ E + ++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYP-VNREDEVDKAPRNLNLLQRL 385
LV ++ + +Q + +V + + G L L V+ ++E K
Sbjct: 75 PFLVNLWYS-----FQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL---------- 119
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
++ ALDYL + Q I H D+KP NILLDE H+ DF +A LP +T
Sbjct: 120 -FICELVMALDYLQN--QRII-HRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQIT 172
Query: 446 GVKGSIGYIAPEY---GLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489
+ G+ Y+APE G+ S D +S G+ EL+ ++P I
Sbjct: 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 28/261 (10%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHR-NLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDK-APRNL-----NLLQR 384
+ AC+ G ++ EF + G+L +L E K AP +L L
Sbjct: 86 NLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQT 442
+ + VA +++L H DL NILL E+ V + DFGLAR + P +V+
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLH 498
+ + ++APE + DV+S+G+L+ E+ + P I E L
Sbjct: 199 GD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 499 NFARMALPDHVMDIVDSTLLN 519
RM PD+ + T+L+
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLD 277
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 28/261 (10%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDK-APRNL-----NLLQR 384
+ AC+ G ++ EF + G+L +L E K AP +L L
Sbjct: 86 NLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQT 442
+ + VA +++L H DL NILL E+ V + DFGLAR + P +V+
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLH 498
+ + ++APE + DV+S+G+L+ E+ + P I E L
Sbjct: 199 GD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 499 NFARMALPDHVMDIVDSTLLN 519
RM PD+ + T+L+
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLD 277
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 35/233 (15%)
Query: 270 DGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRASRSF---IAECRAL 321
D + +G G+FG V D+ + VTV V L + ++E +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 322 RSI-RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL-----------YPVNRE 369
+ I +H+N++ + AC+ Q +V + G+L E+L Y +NR
Sbjct: 95 KMIGKHKNIINLLGACT----QDGPLYVIV-GYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 370 DEVDKAPRNLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGD 428
E ++L ++ +A ++YL C H DL N+L+ E V + D
Sbjct: 150 PEEQMTFKDL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIAD 200
Query: 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
FGLAR + + + + ++APE + DV+S+G+LM E+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 32/224 (14%)
Query: 274 SANLIGTGSFGSVYKG-VLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNL 329
S +IG G FG VY G +D+ + + + +L + +F+ E +R + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAP-RNLNLLQRLNIA 388
+ A G+ ++ +M +G L +++ ++P RN + ++
Sbjct: 85 L----ALIGIMLPPEGLPHVLLPYMCHGDLLQFI----------RSPQRNPTVKDLISFG 130
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR------FLPPTHVQT 442
+ VA ++YL + H DL N +LDE V DFGLAR + +
Sbjct: 131 LQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRH 187
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ + VK + A E +T DV+S+G+L+ EL+ R P
Sbjct: 188 ARLPVK----WTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 278 IGTGSFGSVYK-GVLDEGRTTVTVKV-FNLHHHRASRSFIAECRALRSIRHRNLVKVFTA 335
IGTGS+G K +G+ V ++ + + ++E LR ++H N+V+ +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+D + N +V E+ + G L + +E + L ++ +L +A+
Sbjct: 74 I--ID-RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC--- 127
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
+ D H DLKP+N+ LD + +GDFGLAR L H + + G+ Y++
Sbjct: 128 -HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMS 184
Query: 456 PEYGLGSEVSTNGDVYSYGILMLEL 480
PE + D++S G L+ EL
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 114/261 (43%), Gaps = 28/261 (10%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDK-APRNL-----NLLQR 384
+ AC+ G +V EF + G+L +L E K AP +L L
Sbjct: 95 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQT 442
+ + VA +++L H DL NILL E+ V + DFGLAR + P V+
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLH 498
+ + ++APE + DV+S+G+L+ E+ + P I E L
Sbjct: 208 GD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
Query: 499 NFARMALPDHVMDIVDSTLLN 519
RM PD+ + T+L+
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLD 286
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 43/239 (17%)
Query: 268 ATDGFSSANLIGTGSFGSVYKG--VLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR 325
A+D F ++G G+FG V K LD R K+ H + ++E L S+
Sbjct: 5 ASD-FEEIAVLGQGAFGQVVKARNALD-SRYYAIKKI--RHTEEKLSTILSEVMLLASLN 60
Query: 326 HRNLVKVFTAC----------SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA 375
H+ +V+ + A + V + F + E+ +NG+L + ++ N + D+
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQM--EYCENGTLYDLIHSENLNQQRDEY 118
Query: 376 PRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-- 433
R + + AL Y+H Q I H DLKP NI +DE +GDFGLA+
Sbjct: 119 WR---------LFRQILEALSYIH--SQGII-HRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 434 -------FLPPTHVQTSSIGVKGSIG---YIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
L ++ SS + +IG Y+A E G+ + D+YS GI+ E+I
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 31/243 (12%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGV-LDEGRTTVTVKVFNLHHHRASRSF-IAECRALRSIR 325
+ + + + L+G GS+G V K D GR K + + + E + L+ +R
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H NLV + C + LV+EF+ + L D+++ P L+
Sbjct: 83 HENLVNLLEVC-----KKKKRWYLVFEFVDHTIL----------DDLELFPNGLDYQVVQ 127
Query: 386 NIAIDVASALDYLH-HDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL-PPTHVQTS 443
+ + + + H H+ H D+KP NIL+ + V + DFG AR L P V
Sbjct: 128 KYLFQIINGIGFCHSHN----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD 183
Query: 444 SIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
+ + Y APE +G + DV++ G L+ E+ + + +F GD ++
Sbjct: 184 EVATR---WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM----GEPLFPGDSDIDQLYH 236
Query: 503 MAL 505
+ +
Sbjct: 237 IMM 239
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 24/259 (9%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDK-APRNL-----NLLQR 384
+ AC+ G +V EF + G+L +L E K AP +L L
Sbjct: 95 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
+ + VA +++L H DL NILL E+ V + DFGLAR +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLHNF 500
+ + ++APE + DV+S+G+L+ E+ + P I E L
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267
Query: 501 ARMALPDHVMDIVDSTLLN 519
RM PD+ + T+L+
Sbjct: 268 TRMRAPDYTTPEMYQTMLD 286
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 24/259 (9%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDK-APRNL-----NLLQR 384
+ AC+ G +V EF + G+L +L E K AP +L L
Sbjct: 86 NLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
+ + VA +++L H DL NILL E+ V + DFGLAR +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLHNF 500
+ + ++APE + DV+S+G+L+ E+ + P I E L
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 258
Query: 501 ARMALPDHVMDIVDSTLLN 519
RM PD+ + T+L+
Sbjct: 259 TRMRAPDYTTPEMYQTMLD 277
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 38/240 (15%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS-------RSFIAECRALRSIRHRNLV 330
IG G FG V+KG L + ++ V +K L + F E + ++ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
K++ ++ +V EF+ G L L +DKA + +L + +D
Sbjct: 87 KLYGLM-------HNPPRMVMEFVPCGDLYHRL--------LDKA-HPIKWSVKLRLMLD 130
Query: 391 VASALDYLHHDCQPITTHCDLKPSNIL---LDEE--MVSHVGDFGLARFLPPTHVQTSSI 445
+A ++Y+ + PI H DL+ NI LDE + + V DFG ++ V + S
Sbjct: 131 IALGIEYMQNQNPPI-VHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVS- 184
Query: 446 GVKGSIGYIAPEYGLGSE---VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
G+ G+ ++APE +G+E + D YS+ +++ ++ + P D G + N R
Sbjct: 185 GLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 25/216 (11%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + ++ V VK+ + H + ++E + + + +H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ AC+ G ++ E+ G L +L D + R L L L+ +
Sbjct: 106 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 391 VASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG 449
VA + +L +C H D+ N+LL V+ +GDFGLAR + + S+ VKG
Sbjct: 161 VAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDI----MNDSNYIVKG 212
Query: 450 S----IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + ++APE + DV+SYGIL+ E+
Sbjct: 213 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 248
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 278 IGTGSFGSVYK-GVLDEGRTTVTVKV-FNLHHHRASRSFIAECRALRSIRHRNLVKVFTA 335
IGTGS+G K +G+ V ++ + + ++E LR ++H N+V+ +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+D + N +V E+ + G L + +E + L ++ +L +A+
Sbjct: 74 I--ID-RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC--- 127
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
+ D H DLKP+N+ LD + +GDFGLAR L H + + G+ Y++
Sbjct: 128 -HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDEDFAKEFVGTPYYMS 184
Query: 456 PEYGLGSEVSTNGDVYSYGILMLEL 480
PE + D++S G L+ EL
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 278 IGTGSFGSVYK-GVLDEGRTTVTVKV-FNLHHHRASRSFIAECRALRSIRHRNLVKVFTA 335
IGTGS+G K +G+ V ++ + + ++E LR ++H N+V+ +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+D + N +V E+ + G L + +E + L ++ +L +A+
Sbjct: 74 I--ID-RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC--- 127
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
+ D H DLKP+N+ LD + +GDFGLAR L H + + G+ Y++
Sbjct: 128 -HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKTFVGTPYYMS 184
Query: 456 PEYGLGSEVSTNGDVYSYGILMLEL 480
PE + D++S G L+ EL
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 272 FSSANLI-----GTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRAS-RSFIAECRA 320
F NL+ G G FG V K G TTV VK+ + + R ++E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNRE----------- 369
L+ + H +++K++ ACS Q L+ E+ + GSL +L +
Sbjct: 80 LKQVNHPHVIKLYGACS----QDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 370 -----DEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424
D D+ R L + ++ A ++ + YL + H DL NIL+ E
Sbjct: 135 NSSSLDHPDE--RALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKM 189
Query: 425 HVGDFGLAR--FLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ DFGL+R + ++V+ S + + ++A E +T DV+S+G+L+ E++
Sbjct: 190 KISDFGLSRDVYEEDSYVKRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 38/240 (15%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS-------RSFIAECRALRSIRHRNLV 330
IG G FG V+KG L + ++ V +K L + F E + ++ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
K++ ++ +V EF+ G L L +DKA + +L + +D
Sbjct: 87 KLYGLM-------HNPPRMVMEFVPCGDLYHRL--------LDKA-HPIKWSVKLRLMLD 130
Query: 391 VASALDYLHHDCQPITTHCDLKPSNIL---LDEE--MVSHVGDFGLARFLPPTHVQTSSI 445
+A ++Y+ + PI H DL+ NI LDE + + V DF L++ V + S
Sbjct: 131 IALGIEYMQNQNPPI-VHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVS- 184
Query: 446 GVKGSIGYIAPEYGLGSE---VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
G+ G+ ++APE +G+E + D YS+ +++ ++ + P D G + N R
Sbjct: 185 GLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 276 NLIGTGSFGSVYKGVL----DEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLV 330
++G+G+FG+VYKG+ + + V +KV + +A++ + E + + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
++ C Q LV + M G L D V + L LN +
Sbjct: 83 RLLGICLTSTVQ------LVTQLMPYGCLL---------DHVRENRGRLGSQDLLNWCMQ 127
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS 450
+A + YL D + + H DL N+L+ + DFGLAR L + + G K
Sbjct: 128 IAKGMSYLE-DVRLV--HRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP 184
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSD 488
I ++A E L + DV+SYG+ + EL+ KP D
Sbjct: 185 IKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G + + L +++ DE QR
Sbjct: 71 RHPNILRLY----GYFHDATRV-YLILEYAPRGEVYKELQKLSKFDE-----------QR 114
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 115 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 170
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 171 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 223
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 224 SRVEFTFPDFVTE 236
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 35/224 (15%)
Query: 281 GSFGSVYKG-VLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGV 339
G FG V+K +L+E V VK+F + ++ ++ E +L ++H N+++ G
Sbjct: 35 GRFGCVWKAQLLNE---YVAVKIFPIQDKQSWQNEY-EVYSLPGMKHENILQFI----GA 86
Query: 340 DYQGNDFKA---LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
+ +G L+ F + GSL ++L ++ + +IA +A L
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFL-----------KANVVSWNELCHIAETMARGLA 135
Query: 397 YLHHDC-------QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG 449
YLH D +P +H D+K N+LL + + + DFGLA + G G
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG 195
Query: 450 SIGYIAPEYGLGS-----EVSTNGDVYSYGILMLELIIRKKPSD 488
+ Y+APE G+ + D+Y+ G+++ EL R +D
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 25/216 (11%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + ++ V VK+ + H + ++E + + + +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ AC+ G ++ E+ G L +L D + R L L L+ +
Sbjct: 114 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 391 VASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG 449
VA + +L +C H D+ N+LL V+ +GDFGLAR + + S+ VKG
Sbjct: 169 VAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDI----MNDSNYIVKG 220
Query: 450 S----IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + ++APE + DV+SYGIL+ E+
Sbjct: 221 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 256
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 278 IGTGSFGSVYKGV---LDEGR----TTVTVKVFNLHHHRASRS-FIAECRALRSI-RHRN 328
+G G+FG V LD+ + T V VK+ S I+E ++ I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL---------YPVNREDEVDKAPRNL 379
++ + AC+ Q +V E+ G+L E+L Y N ++ +
Sbjct: 137 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 380 NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTH 439
+L+ + A VA ++YL H DL N+L+ E+ V + DFGLAR +
Sbjct: 192 DLV---SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + + ++APE + DV+S+G+L+ E+
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 65 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 112
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 113 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 167
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
T + ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 168 THEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 220
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 221 FRIFRTLGTPDEVV 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 24/259 (9%)
Query: 278 IGTGSFGSVYKGV---LDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHR-NLV 330
+G G+FG V + +D+ T TV V L H R+ ++E + L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDK-APRNL-----NLLQR 384
+ AC+ G ++ EF + G+L +L E K AP +L L
Sbjct: 86 NLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
+ + VA +++L H DL NILL E+ V + DFGLAR +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPS---DIMFEGDMNLHNF 500
+ + ++APE + DV+S+G+L+ E+ + P I E L
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 258
Query: 501 ARMALPDHVMDIVDSTLLN 519
RM PD+ + T+L+
Sbjct: 259 TRMRAPDYTTPEMYQTMLD 277
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 26/244 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN---LHHHRASRSFIAECRALRSIRH 326
+ F NL+G GSF VY+ V +K+ + ++ + E + ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
++++++ ++ +++ LV E NG + +L ++ V N + +
Sbjct: 71 PSILELYNY-----FEDSNYVYLVLEMCHNGEMNRYL-----KNRVKPFSEN----EARH 116
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + + YLH H DL SN+LL M + DFGLA L H + ++
Sbjct: 117 FMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC 173
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALP 506
G+ YI+PE S DV+S G + L+I + P F+ D + ++ L
Sbjct: 174 --GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP----FDTDTVKNTLNKVVLA 227
Query: 507 DHVM 510
D+ M
Sbjct: 228 DYEM 231
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 56
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 57 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 104
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 105 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 159
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
T + ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 160 TYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 212
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 213 QLFRIFRTLGTPDEVV 228
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 65 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 112
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 113 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 167
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
T + ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 168 THEV---VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 220
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 221 FRIFRTLGTPDEVV 234
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 58 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 105
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 106 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
T + ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 161 THEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 213
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 214 FRIFRTLGTPDEVV 227
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 57 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 104
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 105 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
T + ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 160 THEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 212
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 213 FRIFRTLGTPDEVV 226
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 109/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYK-----ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 58 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 105
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + + L + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 106 K--SYLFQLLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
T + ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 161 THEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 213
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 214 FRIFRTLGTPDEVV 227
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 57 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 104
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 105 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
T + ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 160 THEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 212
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 213 FRIFRTLGTPDEVV 226
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 58 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 105
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 106 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
T + ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 161 THEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 213
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 214 FRIFRTLGTPDEVV 227
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 47/242 (19%)
Query: 272 FSSANLI-----GTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRAS-RSFIAECRA 320
F NL+ G G FG V K G TTV VK+ + + R ++E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNRE----------- 369
L+ + H +++K++ ACS Q L+ E+ + GSL +L +
Sbjct: 80 LKQVNHPHVIKLYGACS----QDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 370 -----DEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424
D D+ R L + ++ A ++ + YL + H DL NIL+ E
Sbjct: 135 NSSSLDHPDE--RALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKM 189
Query: 425 HVGDFGLARFLPPTHVQTSSIGVKGSIG-----YIAPEYGLGSEVSTNGDVYSYGILMLE 479
+ DFGL+R V VK S G ++A E +T DV+S+G+L+ E
Sbjct: 190 KISDFGLSR-----DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 480 LI 481
++
Sbjct: 245 IV 246
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 67 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 110
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 111 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTL 167
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
S G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 168 S----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 219
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 220 SRVEFTFPDFVTE 232
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 47/242 (19%)
Query: 272 FSSANLI-----GTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHHRAS-RSFIAECRA 320
F NL+ G G FG V K G TTV VK+ + + R ++E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNRE----------- 369
L+ + H +++K++ ACS Q L+ E+ + GSL +L +
Sbjct: 80 LKQVNHPHVIKLYGACS----QDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 370 -----DEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424
D D+ R L + ++ A ++ + YL + H DL NIL+ E
Sbjct: 135 NSSSLDHPDE--RALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKM 189
Query: 425 HVGDFGLARFLPPTHVQTSSIGVKGSIG-----YIAPEYGLGSEVSTNGDVYSYGILMLE 479
+ DFGL+R V VK S G ++A E +T DV+S+G+L+ E
Sbjct: 190 KISDFGLSR-----DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 480 LI 481
++
Sbjct: 245 IV 246
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 58 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 105
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 106 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
T + ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 161 THEV---VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 213
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 214 FRIFRTLGTPDEVV 227
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G + + L +++ DE QR
Sbjct: 71 RHPNILRLY----GYFHDATRV-YLILEYAPRGEVYKELQKLSKFDE-----------QR 114
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 115 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 167
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 168 RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 223
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 224 SRVEFTFPDFVTE 236
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLK 57
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 58 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 105
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 106 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
T + ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 161 THEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 213
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 214 FRIFRTLGTPDEVV 227
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLK 56
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 57 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 104
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 105 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
T + ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 160 THEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 212
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 213 FRIFRTLGTPDEVV 226
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 278 IGTGSFGSVYKGV---LDEGR----TTVTVKVFNLHHHRASRS-FIAECRALRSI-RHRN 328
+G G+FG V LD+ + T V VK+ S I+E ++ I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL---------YPVNREDEVDKAPRNL 379
++ + AC+ Q +V E+ G+L E+L Y N ++ +
Sbjct: 89 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 380 NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTH 439
+L+ + A VA ++YL H DL N+L+ E+ V + DFGLAR +
Sbjct: 144 DLV---SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 197
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + + ++APE + DV+S+G+L+ E+
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 239
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 92/236 (38%), Gaps = 33/236 (13%)
Query: 278 IGTGSFGSVYKGVLD--EGRT-TVTVKVFN---LHHHRASRSFIAECRALRSIRHRNLVK 331
+G GSFG V +G D G+T +V VK L A FI E A+ S+ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
++ + +V E GSL D + K + L A+ V
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLL---------DRLRKHQGHFLLGTLSRYAVQV 120
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV---- 447
A + YL H DL N+LL + +GDFGL R LP Q V
Sbjct: 121 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP----QNDDHXVMQEH 173
Query: 448 -KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
K + APE S D + +G+ + E+ + I G LH +
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 92 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 135
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 136 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 191
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 192 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 244
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 245 SRVEFTFPDFVTE 257
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 278 IGTGSFGSVYKGV---LDEGR----TTVTVKVFNLHHHRASRS-FIAECRALRSI-RHRN 328
+G G+FG V LD+ + T V VK+ S I+E ++ I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL---------YPVNREDEVDKAPRNL 379
++ + AC+ Q +V E+ G+L E+L Y N ++ +
Sbjct: 88 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 380 NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTH 439
+L+ + A VA ++YL H DL N+L+ E+ V + DFGLAR +
Sbjct: 143 DLV---SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 196
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + + ++APE + DV+S+G+L+ E+
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 238
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 278 IGTGSFGSVYKGV---LDEGR----TTVTVKVFNLHHHRASRS-FIAECRALRSI-RHRN 328
+G G+FG V LD+ + T V VK+ S I+E ++ I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL---------YPVNREDEVDKAPRNL 379
++ + AC+ Q +V E+ G+L E+L Y N ++ +
Sbjct: 85 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 380 NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTH 439
+L+ + A VA ++YL H DL N+L+ E+ V + DFGLAR +
Sbjct: 140 DLV---SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + + ++APE + DV+S+G+L+ E+
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 235
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 278 IGTGSFGSVYKGV---LDEGR----TTVTVKVFNLHHHRASRS-FIAECRALRSI-RHRN 328
+G G+FG V LD+ + T V VK+ S I+E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL---------YPVNREDEVDKAPRNL 379
++ + AC+ Q +V E+ G+L E+L Y N ++ +
Sbjct: 96 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 380 NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTH 439
+L+ + A VA ++YL H DL N+L+ E+ V + DFGLAR +
Sbjct: 151 DLV---SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + + ++APE + DV+S+G+L+ E+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 278 IGTGSFGSVYKGV---LDEGR----TTVTVKVFNLHHHRASRS-FIAECRALRSI-RHRN 328
+G G+FG V LD+ + T V VK+ S I+E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL---------YPVNREDEVDKAPRNL 379
++ + AC+ Q +V E+ G+L E+L Y N ++ +
Sbjct: 96 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 380 NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTH 439
+L+ + A VA ++YL H DL N+L+ E+ V + DFGLAR +
Sbjct: 151 DLV---SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + + ++APE + DV+S+G+L+ E+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 278 IGTGSFGSVYKGV---LDEGR----TTVTVKVFNLHHHRASRS-FIAECRALRSI-RHRN 328
+G G+FG V LD+ + T V VK+ S I+E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLY---PVNREDEVDKA---PRNLNLL 382
++ + AC+ Q +V E+ G+L E+L P E + + L+
Sbjct: 96 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
++ A VA ++YL H DL N+L+ E+ V + DFGLAR +
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + + ++APE + DV+S+G+L+ E+
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 90/232 (38%), Gaps = 25/232 (10%)
Query: 278 IGTGSFGSVYKGVLD--EGRT-TVTVKVFN---LHHHRASRSFIAECRALRSIRHRNLVK 331
+G GSFG V +G D G+T +V VK L A FI E A+ S+ HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
++ + +V E GSL D + K + L A+ V
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLL---------DRLRKHQGHFLLGTLSRYAVQV 124
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ-TSSIGVKGS 450
A + YL H DL N+LL + +GDFGL R LP K
Sbjct: 125 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
+ APE S D + +G+ + E+ + I G LH +
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 91/233 (39%), Gaps = 33/233 (14%)
Query: 278 IGTGSFGSVYKGVLD--EGRT-TVTVKVFN---LHHHRASRSFIAECRALRSIRHRNLVK 331
+G GSFG V +G D G+T +V VK L A FI E A+ S+ HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
++ + +V E GSL D + K + L A+ V
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLL---------DRLRKHQGHFLLGTLSRYAVQV 130
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV---- 447
A + YL H DL N+LL + +GDFGL R LP Q V
Sbjct: 131 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP----QNDDHXVMQEH 183
Query: 448 -KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN 499
K + APE S D + +G+ + E+ + I G LH
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 236
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 39/225 (17%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + ++ V VK+ + H + ++E + + + +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ AC+ G ++ E+ G L +L +R E D A IA
Sbjct: 114 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKSRVLETDPA---------FAIANS 159
Query: 391 VASALDYLHHDCQPI----------TTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHV 440
AS D LH Q H D+ N+LL V+ +GDFGLAR + +
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI----M 215
Query: 441 QTSSIGVKGS----IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
S+ VKG+ + ++APE + DV+SYGIL+ E+
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 24/214 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRS----FIAECRALRSIRHRNLVKVF 333
IG GSF +VYKG+ E TTV V L + ++S F E L+ ++H N+V+ +
Sbjct: 34 IGRGSFKTVYKGLDTE--TTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
+ +G LV E +G+L+ +L + +V K + +L+ + +
Sbjct: 92 DSWEST-VKGKKCIVLVTELXTSGTLKTYL----KRFKVXK----IKVLR--SWCRQILK 140
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPPTHVQTSSIGVKGSIG 452
L +LH PI H DLK NI + S +GD GLA + + V G+
Sbjct: 141 GLQFLHTRTPPI-IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK----AVIGTPE 195
Query: 453 YIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ APE + + DVY++G LE + P
Sbjct: 196 FXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 90/232 (38%), Gaps = 25/232 (10%)
Query: 278 IGTGSFGSVYKGVLD--EGRT-TVTVKVFN---LHHHRASRSFIAECRALRSIRHRNLVK 331
+G GSFG V +G D G+T +V VK L A FI E A+ S+ HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
++ + +V E GSL D + K + L A+ V
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLL---------DRLRKHQGHFLLGTLSRYAVQV 124
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ-TSSIGVKGS 450
A + YL H DL N+LL + +GDFGL R LP K
Sbjct: 125 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
+ APE S D + +G+ + E+ + I G LH +
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 25/227 (11%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS-RSFIAECRALRSIRHRN 328
D + +IG+G+ V + V +K NL + S + E +A+ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V +T+ + D LV + + GS+ + + + V K +L IA
Sbjct: 75 IVSYYTS-----FVVKDELWLVMKLLSGGSVLDIIKHI-----VAKGEHKSGVLDESTIA 124
Query: 389 I---DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+V L+YLH + Q H D+K NILL E+ + DFG++ FL T +
Sbjct: 125 TILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 181
Query: 446 GVKGSIG---YIAPEYGLGSEV---STNGDVYSYGILMLELIIRKKP 486
K +G ++APE + +V D++S+GI +EL P
Sbjct: 182 VRKTFVGTPCWMAPE--VMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 38/224 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI--RHRNLVKVFTA 335
IG G FG V++G V VK+F+ R RS+ E +++ RH N++ F A
Sbjct: 50 IGKGRFGEVWRGKWRG--EEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIA 103
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWL--YPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
D LV ++ ++GSL ++L Y V E + +A+ AS
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI-------------KLALSTAS 150
Query: 394 ALDYLHHDC-----QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
L +LH + +P H DLK NIL+ + + D GLA + T I
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPN 209
Query: 449 GSIG---YIAPEYGLGS------EVSTNGDVYSYGILMLELIIR 483
+G Y+APE S E D+Y+ G++ E+ R
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 71 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 114
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 115 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 170
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 171 ---LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 223
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 224 SRVEFTFPDFVTE 236
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 91/231 (39%), Gaps = 29/231 (12%)
Query: 278 IGTGSFGSVYKGVLD--EGRT-TVTVKVFN---LHHHRASRSFIAECRALRSIRHRNLVK 331
+G GSFG V +G D G+T +V VK L A FI E A+ S+ HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
++ + +V E GSL D + K + L A+ V
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLL---------DRLRKHQGHFLLGTLSRYAVQV 130
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPT---HVQTSSIGVK 448
A + YL H DL N+LL + +GDFGL R LP +V V
Sbjct: 131 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV- 186
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN 499
+ APE S D + +G+ + E+ + I G LH
Sbjct: 187 -PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 236
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 7 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 62 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 109
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 110 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 164
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
T + ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 165 THEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 217
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 218 FRIFRTLGTPDEVV 231
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 67 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 110
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 111 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT- 166
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 167 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 219
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 220 SRVEFTFPDFVTE 232
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 25/227 (11%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS-RSFIAECRALRSIRHRN 328
D + +IG+G+ V + V +K NL + S + E +A+ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V +T+ + D LV + + GS+ + + + V K +L IA
Sbjct: 70 IVSYYTS-----FVVKDELWLVMKLLSGGSVLDIIKHI-----VAKGEHKSGVLDESTIA 119
Query: 389 I---DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+V L+YLH + Q H D+K NILL E+ + DFG++ FL T +
Sbjct: 120 TILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 176
Query: 446 GVKGSIG---YIAPEYGLGSEV---STNGDVYSYGILMLELIIRKKP 486
K +G ++APE + +V D++S+GI +EL P
Sbjct: 177 VRKTFVGTPCWMAPE--VMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 278 IGTGSFGSVYKGV---LDEGR----TTVTVKVFNLHHHRASRS-FIAECRALRSI-RHRN 328
+G G+FG V LD+ + T V VK+ S I+E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL---------YPVNREDEVDKAPRNL 379
++ + AC+ Q +V E+ G+L E+L Y N ++ +
Sbjct: 96 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 380 NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTH 439
+L+ + A VA ++YL H DL N+L+ E+ V + DFGLAR +
Sbjct: 151 DLV---SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + + ++APE + DV+S+G+L+ E+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 89/229 (38%), Gaps = 25/229 (10%)
Query: 278 IGTGSFGSVYKGVLD--EGRT-TVTVKVFN---LHHHRASRSFIAECRALRSIRHRNLVK 331
+G GSFG V +G D G+T +V VK L A FI E A+ S+ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
++ + +V E GSL D + K + L A+ V
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLL---------DRLRKHQGHFLLGTLSRYAVQV 120
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ-TSSIGVKGS 450
A + YL H DL N+LL + +GDFGL R LP K
Sbjct: 121 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN 499
+ APE S D + +G+ + E+ + I G LH
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 226
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 71 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 114
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 115 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 170
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 171 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 223
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 224 SRVEFTFPDFVTE 236
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 90/232 (38%), Gaps = 25/232 (10%)
Query: 278 IGTGSFGSVYKGVLD--EGRT-TVTVKVFN---LHHHRASRSFIAECRALRSIRHRNLVK 331
+G GSFG V +G D G+T +V VK L A FI E A+ S+ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
++ + +V E GSL D + K + L A+ V
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLL---------DRLRKHQGHFLLGTLSRYAVQV 120
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ-TSSIGVKGS 450
A + YL H DL N+LL + +GDFGL R LP K
Sbjct: 121 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
+ APE S D + +G+ + E+ + I G LH +
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 38/224 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI--RHRNLVKVFTA 335
IG G FG V++G V VK+F+ R RS+ E +++ RH N++ F A
Sbjct: 37 IGKGRFGEVWRGKWRG--EEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIA 90
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWL--YPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
D LV ++ ++GSL ++L Y V E + +A+ AS
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI-------------KLALSTAS 137
Query: 394 ALDYLHHDC-----QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
L +LH + +P H DLK NIL+ + + D GLA + T I
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPN 196
Query: 449 GSIG---YIAPEYGLGS------EVSTNGDVYSYGILMLELIIR 483
+G Y+APE S E D+Y+ G++ E+ R
Sbjct: 197 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVF---NLHHHRASRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV L E +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ + L+ E+ G++ L +++ DE QR
Sbjct: 63 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QR 106
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 107 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 162
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 163 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 215
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 216 SRVEFTFPDFVTE 228
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 83 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 126
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 127 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 182
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 183 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 235
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 236 SRVEFTFPDFVTE 248
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 69 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 112
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 168
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 169 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 221
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 222 SRVEFTFPDFVTE 234
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 66 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 109
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 110 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 165
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 166 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 218
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 219 SRVEFTFPDFVTE 231
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 48/259 (18%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 58
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRN-- 378
L+ + H N+VK+ V + N LV+EF+ ++ +D +D +
Sbjct: 59 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLS----------MDLKDFMDASALTGI 103
Query: 379 -LNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLP 436
L L++ + A + H H DLKP N+L++ E + DFGLAR F
Sbjct: 104 PLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 158
Query: 437 PTHVQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDM 495
P + ++ Y APE LG + ST D++S G + E++ R+ +F GD
Sbjct: 159 PVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDS 211
Query: 496 NLHN----FARMALPDHVM 510
+ F + PD V+
Sbjct: 212 EIDQLFRIFRTLGTPDEVV 230
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 278 IGTGSFGSVYKGV---LDEGR----TTVTVKVFNLHHHRASRS-FIAECRALRSI-RHRN 328
+G G+FG V LD+ + T V VK+ S I+E ++ I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWL---------YPVNREDEVDKAPRNL 379
++ + AC+ Q +V E+ G+L E+L Y N ++ +
Sbjct: 81 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 380 NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTH 439
+L+ + A VA ++YL H DL N+L+ E+ V + DFGLAR +
Sbjct: 136 DLV---SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + + ++APE + DV+S+G+L+ E+
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 48/259 (18%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 57
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRN-- 378
L+ + H N+VK+ V + N LV+EF+ ++ +D +D +
Sbjct: 58 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLS----------MDLKDFMDASALTGI 102
Query: 379 -LNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLP 436
L L++ + A + H H DLKP N+L++ E + DFGLAR F
Sbjct: 103 PLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 157
Query: 437 PTHVQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDM 495
P + ++ Y APE LG + ST D++S G + E++ R+ +F GD
Sbjct: 158 PVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDS 210
Query: 496 NLHN----FARMALPDHVM 510
+ F + PD V+
Sbjct: 211 EIDQLFRIFRTLGTPDEVV 229
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 48/259 (18%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGEVVALKKIRLDTETEGVPSTAIREISL 55
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRN-- 378
L+ + H N+VK+ V + N LV+EF+ + +D +D +
Sbjct: 56 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ----------DLKDFMDASALTGI 100
Query: 379 -LNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLP 436
L L++ + A + H H DLKP N+L++ E + DFGLAR F
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPENLLINTEGAIKLADFGLARAFGV 155
Query: 437 PTHVQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDM 495
P + ++ Y APE LG + ST D++S G + E++ R+ +F GD
Sbjct: 156 PVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDS 208
Query: 496 NLHN----FARMALPDHVM 510
+ F + PD V+
Sbjct: 209 EIDQLFRIFRTLGTPDEVV 227
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 38/224 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI--RHRNLVKVFTA 335
IG G FG V++G V VK+F+ R RS+ E +++ RH N++ F A
Sbjct: 14 IGKGRFGEVWRGKWRG--EEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIA 67
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWL--YPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
D LV ++ ++GSL ++L Y V E + +A+ AS
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI-------------KLALSTAS 114
Query: 394 ALDYLHHDC-----QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
L +LH + +P H DLK NIL+ + + D GLA + T I
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPN 173
Query: 449 GSIG---YIAPEYGLGS------EVSTNGDVYSYGILMLELIIR 483
+G Y+APE S E D+Y+ G++ E+ R
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ + L+ E+ G++ L +++ DE QR
Sbjct: 70 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QR 113
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 114 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 169
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 170 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 222
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 223 SRVEFTFPDFVTE 235
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 38/224 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI--RHRNLVKVFTA 335
IG G FG V++G V VK+F+ R RS+ E +++ RH N++ F A
Sbjct: 11 IGKGRFGEVWRGKWRG--EEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIA 64
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWL--YPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
D LV ++ ++GSL ++L Y V E + +A+ AS
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI-------------KLALSTAS 111
Query: 394 ALDYLHHDC-----QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
L +LH + +P H DLK NIL+ + + D GLA + T I
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPN 170
Query: 449 GSIG---YIAPEYGLGS------EVSTNGDVYSYGILMLELIIR 483
+G Y+APE S E D+Y+ G++ E+ R
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 38/224 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI--RHRNLVKVFTA 335
IG G FG V++G V VK+F+ R RS+ E +++ RH N++ F A
Sbjct: 17 IGKGRFGEVWRGKWRG--EEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIA 70
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWL--YPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
D LV ++ ++GSL ++L Y V E + +A+ AS
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI-------------KLALSTAS 117
Query: 394 ALDYLHHDC-----QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
L +LH + +P H DLK NIL+ + + D GLA + T I
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPN 176
Query: 449 GSIG---YIAPEYGLGS------EVSTNGDVYSYGILMLELIIR 483
+G Y+APE S E D+Y+ G++ E+ R
Sbjct: 177 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 271 GFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLV 330
+++ +IG GSFG V++ L E KV + R E + +R ++H N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVL-----QDKRFKNRELQIMRIVKHPNVV 95
Query: 331 --KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
K F +G D + F LV E+ + E +Y +R K + + +L
Sbjct: 96 DLKAFFYSNG-DKKDEVFLNLVLEY-----VPETVYRASR--HYAKLKQTMPMLLIKLYM 147
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGV 447
+ +L Y+H H D+KP N+LLD V + DFG A+ L S I
Sbjct: 148 YQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXI-- 202
Query: 448 KGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELI 481
S Y APE G + +TN D++S G +M EL+
Sbjct: 203 -CSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 38/224 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI--RHRNLVKVFTA 335
IG G FG V++G V VK+F+ R RS+ E +++ RH N++ F A
Sbjct: 12 IGKGRFGEVWRGKWRG--EEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIA 65
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWL--YPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
D LV ++ ++GSL ++L Y V E + +A+ AS
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI-------------KLALSTAS 112
Query: 394 ALDYLHHDC-----QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
L +LH + +P H DLK NIL+ + + D GLA + T I
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPN 171
Query: 449 GSIG---YIAPEYGLGS------EVSTNGDVYSYGILMLELIIR 483
+G Y+APE S E D+Y+ G++ E+ R
Sbjct: 172 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 69 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 112
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 168
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 169 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 221
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 222 SRVEFTFPDFVTE 234
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ + L+ E+ G++ L +++ DE QR
Sbjct: 65 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QR 108
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 109 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT- 164
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 165 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 217
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 218 SRVEFTFPDFVTE 230
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ + L+ E+ G++ L +++ DE QR
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QR 112
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 165
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 166 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 221
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 222 SRVEFTFPDFVTE 234
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 19/182 (10%)
Query: 314 FIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVD 373
F E + ++ H +V V+ A + +V E++ +L + ++ E
Sbjct: 59 FRREAQNAAALNHPAIVAVY-ATGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGP 112
Query: 374 KAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR 433
P+ + + + D AL++ H + H D+KP+NI++ V DFG+AR
Sbjct: 113 MTPK-----RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 434 FLPPT-HVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFE 492
+ + + T + V G+ Y++PE G V DVYS G ++ E++ + P F
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FT 220
Query: 493 GD 494
GD
Sbjct: 221 GD 222
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 43/239 (17%)
Query: 268 ATDGFSSANLIGTGSFGSVYKG--VLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR 325
A+D F ++G G+FG V K LD R K+ H + ++E L S+
Sbjct: 5 ASD-FEEIAVLGQGAFGQVVKARNALD-SRYYAIKKI--RHTEEKLSTILSEVMLLASLN 60
Query: 326 HRNLVKVFTAC----------SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA 375
H+ +V+ + A + V + F + E+ +N +L + ++ N + D+
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQM--EYCENRTLYDLIHSENLNQQRDEY 118
Query: 376 PRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-- 433
R + + AL Y+H Q I H DLKP NI +DE +GDFGLA+
Sbjct: 119 WR---------LFRQILEALSYIH--SQGII-HRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 434 -------FLPPTHVQTSSIGVKGSIG---YIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
L ++ SS + +IG Y+A E G+ + D+YS GI+ E+I
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 59
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 60 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 107
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 108 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 162
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 163 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 215
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 216 QLFRIFRTLGTPDEVV 231
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVKVF 333
IG G FG V++G+ + V +K N F+ E +R H ++VK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
GV + + ++ E G L +L +V K +L+L + A +++
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKF--SLDLASLILYAYQLST 122
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGY 453
AL YL H D+ N+L+ +GDFGL+R++ + +S G K I +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG-KLPIKW 178
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRK-KPSDIMFEGDMN------LHNFARMALP 506
+APE ++ DV+ +G+ M E+++ KP F+G N + N R+ +P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMP 234
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + ++ V VK+ + H + ++E + + + +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA----PRNLNLLQRLN 386
+ AC+ G ++ E+ G L +L +R E D A L+ L+
Sbjct: 114 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 387 IAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ VA + +L +C H D+ N+LL V+ +GDFGLAR + + S+
Sbjct: 169 FSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDI----MNDSNY 220
Query: 446 GVKGS----IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
VKG+ + ++APE + DV+SYGIL+ E+
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 67 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 110
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 111 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 163
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 219
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 220 SRVEFTFPDFVTE 232
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 58
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 59 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 106
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 107 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 162 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 214
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 215 QLFRIFRTLGTPDEVV 230
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 57
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 58 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 105
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 106 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 160
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 161 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 213
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 214 QLFRIFRTLGTPDEVV 229
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 66 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 109
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 110 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 162
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 163 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 218
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 219 SRVEFTFPDFVTE 231
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ + L+ E+ G++ L +++ DE QR
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QR 109
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 110 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 162
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 218
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 219 SRVEFTFPDFVTE 231
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 58
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 59 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 106
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 107 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 162 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 214
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 215 QLFRIFRTLGTPDEVV 230
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 55
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 56 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 103
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 104 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 159 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 211
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 212 QLFRIFRTLGTPDEVV 227
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 66 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 109
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 110 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 162
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 163 RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 218
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 219 SRVEFTFPDFVTE 231
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 56
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 57 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 104
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 105 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 159
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 160 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 212
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 213 QLFRIFRTLGTPDEVV 228
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPT-HVQTS 443
+ + D AL++ H + H D+KP+NI++ V DFG+AR + + + T
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
+ V G+ Y++PE G V DVYS G ++ E++ + P F GD
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 55
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 56 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 103
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 104 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 159 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 211
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 212 QLFRIFRTLGTPDEVV 227
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 22/209 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
D + +GTG+FG V++ K H + E + + +RH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
V + A ++ ++ ++YEFM G L E + DE +K ++ + +
Sbjct: 217 VNLHDA-----FEDDNEMVMIYEFMSGGELFEKV-----ADEHNK----MSEDEAVEYMR 262
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG--DFGLARFLPPTHVQTSSIGV 447
V L ++H + H DLKP NI+ + + + DFGL L P + S
Sbjct: 263 QVCKGLCHMHENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKVT 316
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGIL 476
G+ + APE G V D++S G+L
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 66 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 109
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 110 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 162
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 218
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 219 SRVEFTFPDFVTE 231
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 57
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 58 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 105
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 106 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 160
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 161 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 213
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 214 QLFRIFRTLGTPDEVV 229
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 57
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 58 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 105
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 106 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 160
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 161 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 213
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 214 QLFRIFRTLGTPDEVV 229
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 55
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 56 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 103
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 104 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 159 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 211
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 212 QLFRIFRTLGTPDEVV 227
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVKVF 333
IG G FG V++G+ + V +K N F+ E +R H ++VK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
GV + + ++ E G L +L +V K +L+L + A +++
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKY--SLDLASLILYAYQLST 122
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGY 453
AL YL H D+ N+L+ +GDFGL+R++ + +S G K I +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 178
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRK-KPSDIMFEGDMN------LHNFARMALP 506
+APE ++ DV+ +G+ M E+++ KP F+G N + N R+ +P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMP 234
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ + L+ E+ G++ L +++ DE QR
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QR 114
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 115 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 167
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 168 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 223
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 224 SRVEFTFPDFVTE 236
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 107/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 57 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 104
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 105 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 160 XHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 212
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 213 FRIFRTLGTPDEVV 226
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 55
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 56 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 103
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 104 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 159 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 211
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 212 QLFRIFRTLGTPDEVV 227
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPT-HVQTS 443
+ + D AL++ H + H D+KP+NI++ V DFG+AR + + + T
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
+ V G+ Y++PE G V DVYS G ++ E++ + P F GD
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 107/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 57 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 104
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 105 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 160 XHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 212
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 213 FRIFRTLGTPDEVV 226
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPT-HVQTS 443
+ + D AL++ H + H D+KP+NI++ V DFG+AR + + + T
Sbjct: 136 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
+ V G+ Y++PE G V DVYS G ++ E++ + P F GD
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 239
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 56
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L++++ D L
Sbjct: 57 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLP 104
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 105 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 159
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 160 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 212
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 213 QLFRIFRTLGTPDEVV 228
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPT-HVQTS 443
+ + D AL++ H + H D+KP+NI++ V DFG+AR + + + T
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
+ V G+ Y++PE G V DVYS G ++ E++ + P F GD
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 68 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 111
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 112 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 164
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 165 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 220
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 221 SRVEFTFPDFVTE 233
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ + L+ E+ G++ L +++ DE QR
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QR 109
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 110 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 162
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 163 RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 218
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 219 SRVEFTFPDFVTE 231
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVKVF 333
IG G FG V++G+ + V +K N F+ E +R H ++VK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
GV + + ++ E G L +L +V K +L+L + A +++
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKY--SLDLASLILYAYQLST 122
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGY 453
AL YL H D+ N+L+ +GDFGL+R++ + +S G K I +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 178
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRK-KPSDIMFEGDMN------LHNFARMALP 506
+APE ++ DV+ +G+ M E+++ KP F+G N + N R+ +P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMP 234
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVKVF 333
IG G FG V++G+ + V +K N F+ E +R H ++VK+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
GV + + ++ E G L +L +V K +L+L + A +++
Sbjct: 106 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKY--SLDLASLILYAYQLST 150
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGY 453
AL YL H D+ N+L+ +GDFGL+R++ + +S G K I +
Sbjct: 151 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 206
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRK-KPSDIMFEGDMN------LHNFARMALP 506
+APE ++ DV+ +G+ M E+++ KP F+G N + N R+ +P
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMP 262
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 21/215 (9%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
++ IG G+ G+VY + V ++ NL I E +R ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ Y D +V E++ GSL + V E +D+ Q + +
Sbjct: 82 YLDS-----YLVGDELWVVMEYLAGGSLTD----VVTETCMDEG-------QIAAVCREC 125
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSI 451
AL++LH + H D+K NILL + + DFG + P + S++ G+
Sbjct: 126 LQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--VGTP 180
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
++APE D++S GI+ +E+I + P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 107/254 (42%), Gaps = 42/254 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+VK+ V + N LV+EF+ L++++ D L L+
Sbjct: 59 ELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKKFM------DASALTGIPLPLI 106
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQ 441
+ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 107 KSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 442 TSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN- 499
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 162 XHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQL 214
Query: 500 ---FARMALPDHVM 510
F + PD V+
Sbjct: 215 FRIFRTLGTPDEVV 228
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 92 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 135
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 136 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 188
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 189 RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 244
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 245 SRVEFTFPDFVTE 257
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVKVF 333
IG G FG V++G+ + V +K N F+ E +R H ++VK+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
GV + + ++ E G L +L +V K +L+L + A +++
Sbjct: 83 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKY--SLDLASLILYAYQLST 127
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGY 453
AL YL H D+ N+L+ +GDFGL+R++ + +S G K I +
Sbjct: 128 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 183
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRK-KPSDIMFEGDMN------LHNFARMALP 506
+APE ++ DV+ +G+ M E+++ KP F+G N + N R+ +P
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMP 239
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ + L+ E+ G++ L +++ DE QR
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QR 109
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 110 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 162
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 163 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 218
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 219 SRVEFTFPDFVTE 231
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLA----------RF 434
L+I I +A A+++LH H DLKPSNI + V VGDFGL
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 435 LPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
L P + G G+ Y++PE G+ S D++S G+++ EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + +KV F +A E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ + + L+ E+ G++ L +++ DE QR
Sbjct: 66 RHPNILRLYGY-----FHDSTRVYLILEYAPLGTVYRELQKLSKFDE-----------QR 109
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 110 TATYITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 162
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 163 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQDTYKRI 218
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 219 SRVEFTFPDFVTE 231
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVKVF 333
IG G FG V++G+ + V +K N F+ E +R H ++VK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
GV + + ++ E G L +L +V K +L+L + A +++
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKF--SLDLASLILYAYQLST 122
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGY 453
AL YL H D+ N+L+ +GDFGL+R++ + +S G K I +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 178
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRK-KPSDIMFEGDMN------LHNFARMALP 506
+APE ++ DV+ +G+ M E+++ KP F+G N + N R+ +P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMP 234
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 107/256 (41%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 58
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ L+ ++ D L
Sbjct: 59 LKELNHPNIVKLL----DVIHTENKL-YLVFEFLHQ-DLKTFM------DASALTGIPLP 106
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 107 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 162 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 214
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 215 QLFRIFRTLGTPDEVV 230
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVKVF 333
IG G FG V++G+ + V +K N F+ E +R H ++VK+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
GV + + ++ E G L +L +V K +L+L + A +++
Sbjct: 75 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKY--SLDLASLILYAYQLST 119
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGY 453
AL YL H D+ N+L+ +GDFGL+R++ + +S G K I +
Sbjct: 120 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 175
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRK-KPSDIMFEGDMN------LHNFARMALP 506
+APE ++ DV+ +G+ M E+++ KP F+G N + N R+ +P
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMP 231
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 58
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ + L++++ D L
Sbjct: 59 LKELNHPNIVKLL----DVIHTENKL-YLVFEFL-SMDLKKFM------DASALTGIPLP 106
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 107 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 161
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 162 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 214
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 215 QLFRIFRTLGTPDEVV 230
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVKVF 333
IG G FG V++G+ + V +K N F+ E +R H ++VK+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
GV + + ++ E G L +L +V K +L+L + A +++
Sbjct: 80 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKY--SLDLASLILYAYQLST 124
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGY 453
AL YL H D+ N+L+ +GDFGL+R++ + +S G K I +
Sbjct: 125 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 180
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRK-KPSDIMFEGDMN------LHNFARMALP 506
+APE ++ DV+ +G+ M E+++ KP F+G N + N R+ +P
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMP 236
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 22/209 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
D + +GTG+FG V++ K H + E + + +RH L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
V + A ++ ++ ++YEFM G L E + DE +K + + +
Sbjct: 111 VNLHDA-----FEDDNEMVMIYEFMSGGELFEKV-----ADEHNKMSED----EAVEYMR 156
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG--DFGLARFLPPTHVQTSSIGV 447
V L ++H + H DLKP NI+ + + + DFGL L P + S
Sbjct: 157 QVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKVT 210
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGIL 476
G+ + APE G V D++S G+L
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ + L+ E+ G++ L +++ DE QR
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QR 112
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 165
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 166 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 221
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 222 SRVEFTFPDFVTE 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVKVF 333
IG G FG V++G+ + V +K N F+ E +R H ++VK+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
GV + + ++ E G L +L +V K +L+L + A +++
Sbjct: 81 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKY--SLDLASLILYAYQLST 125
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGY 453
AL YL H D+ N+L+ +GDFGL+R++ + +S G K I +
Sbjct: 126 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 181
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRK-KPSDIMFEGDMN------LHNFARMALP 506
+APE ++ DV+ +G+ M E+++ KP F+G N + N R+ +P
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMP 237
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFN---LHHHRASRSFIAECRALR 322
+D + ++G GSFG V +L + + T VKV + + S + E + L+
Sbjct: 31 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N++K++ ++ + LV E G L + + R EVD A
Sbjct: 88 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------- 135
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS---HVGDFGLARFLPPTH 439
I V S + Y+H + H DLKP N+LL+ + + DFGL+ TH
Sbjct: 136 ---RIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-----TH 184
Query: 440 VQTSSIGVKGSIG---YIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ S +K IG YIAPE G+ DV+S G+++ L+
Sbjct: 185 FEASK-KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILL 227
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 68 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 111
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + +FG + P + T
Sbjct: 112 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT- 167
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 168 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 220
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 221 SRVEFTFPDFVTE 233
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 104/260 (40%), Gaps = 30/260 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG GS G V V VK +L + E +R H N+V ++++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS-- 110
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y D +V EF++ G+L + + +E Q + + V AL Y
Sbjct: 111 ---YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIATVCLSVLRALSY 156
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIG---YI 454
LH+ H D+K +ILL + + DFG V K +G ++
Sbjct: 157 LHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFC-----AQVSKEVPKRKXLVGTPYWM 208
Query: 455 APEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVD 514
APE T D++S GI+++E+I + P E + R +LP V D+
Sbjct: 209 APEVISRLPYGTEVDIWSLGIMVIEMIDGEPP--YFNEPPLQAMRRIRDSLPPRVKDLHK 266
Query: 515 -STLLNDVEDLAIISNQRQR 533
S++L DL ++ QR
Sbjct: 267 VSSVLRGFLDLMLVREPSQR 286
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 42/256 (16%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 56
Query: 321 LRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
L+ + H N+VK+ V + N LV+EF+ + L++++ D L
Sbjct: 57 LKELNHPNIVKLL----DVIHTENKL-YLVFEFL-SMDLKKFM------DASALTGIPLP 104
Query: 381 LLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTH 439
L++ + A + H H DLKP N+L++ E + DFGLAR F P
Sbjct: 105 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 159
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
+ ++ Y APE LG + ST D++S G + E++ R+ +F GD +
Sbjct: 160 TYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEID 212
Query: 499 N----FARMALPDHVM 510
F + PD V+
Sbjct: 213 QLFRIFRTLGTPDEVV 228
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ + L+ E+ G++ L +++ DE QR
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QR 112
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + DFG + P +
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 165
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 166 RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 221
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 222 SRVEFTFPDFVTE 234
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 36/283 (12%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
++ IG G++G V +T V +K + H + + E + L RH N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + + +A+ ++ +E LY + + ++ L Q
Sbjct: 105 GIRDIL-----RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQ------- 152
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK-G 449
+ L Y+H H DLKPSN+L++ + DFGLAR P H T +
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDH 508
+ Y APE L S+ T D++S G ++ E++ + +F G L +H
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPGKHYLDQL------NH 259
Query: 509 VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIG 551
++ I+ S EDL I N + R N ++ L S ++
Sbjct: 260 ILGILGSP---SQEDLNCIINMKAR-----NYLQSLPSKTKVA 294
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 86/217 (39%), Gaps = 36/217 (16%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E + L+++ +VK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 73
Query: 334 TACSGVDY-QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
GV Y G LV E++ +G L + LQR +D +
Sbjct: 74 ---RGVSYGPGRPELRLVMEYLPSGCLR-------------------DFLQRHRARLDAS 111
Query: 393 SALDYLHHDCQPI-------TTHCDLKPSNILLDEEMVSHVGDFGLARFLP-PTHVQTSS 444
L Y C+ + H DL NIL++ E + DFGLA+ LP
Sbjct: 112 RLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVR 171
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ I + APE + S DV+S+G+++ EL
Sbjct: 172 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 21/215 (9%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
++ IG G+ G+VY + V ++ NL I E +R ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ Y D +V E++ GSL + V E +D+ Q + +
Sbjct: 82 YLDS-----YLVGDELWVVMEYLAGGSLTD----VVTETCMDEG-------QIAAVCREC 125
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSI 451
AL++LH + H D+K NILL + + DFG + P + S + G+
Sbjct: 126 LQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM--VGTP 180
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
++APE D++S GI+ +E+I + P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSI 324
A + F +G G FG+VY + + + +KV F +A E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
RH N+++++ G + L+ E+ G++ L +++ DE QR
Sbjct: 69 RHPNILRLY----GYFHDATRV-YLILEYAPLGTVYRELQKLSKFDE-----------QR 112
Query: 385 LNIAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
I ++A+AL Y H H D+KP N+LL + +FG + P + T
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT- 168
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
+ G++ Y+ PE G D++S G+L E ++ K P FE + + R+
Sbjct: 169 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRI 221
Query: 504 A-----LPDHVMD 511
+ PD V +
Sbjct: 222 SRVEFTFPDFVTE 234
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 21/215 (9%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
++ IG G+ G+VY + V ++ NL I E +R ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ Y D +V E++ GSL + V E +D+ Q + +
Sbjct: 83 YLDS-----YLVGDELWVVMEYLAGGSLTD----VVTETCMDEG-------QIAAVCREC 126
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSI 451
AL++LH + H D+K NILL + + DFG + P + S + G+
Sbjct: 127 LQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM--VGTP 181
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
++APE D++S GI+ +E+I + P
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 21/215 (9%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
++ IG G+ G+VY + V ++ NL I E +R ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ Y D +V E++ GSL + V E +D+ Q + +
Sbjct: 82 YLDS-----YLVGDELWVVMEYLAGGSLTD----VVTETCMDEG-------QIAAVCREC 125
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSI 451
AL++LH + H D+K NILL + + DFG + P + S + G+
Sbjct: 126 LQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM--VGTP 180
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
++APE D++S GI+ +E+I + P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRASRSFIAECRALRSIRHRNLVKVFTAC 336
IG G++G VYK + G T K+ + I E L+ ++H N+VK++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
LV+E + + + +D L + + + + + +
Sbjct: 70 -----HTKKRLVLVFEHLDQ----------DLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSIGVKGSIGYIA 455
Y H H DLKP N+L++ E + DFGLAR F P T I ++ Y A
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI---VTLWYRA 168
Query: 456 PEYGLGS-EVSTNGDVYSYGILMLELI 481
P+ +GS + ST D++S G + E++
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 38/218 (17%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E + L+++ +VK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 76
Query: 334 TACSGVDY-QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
GV Y G LV E++ +G L + LQR +D +
Sbjct: 77 ---RGVSYGPGRQSLRLVMEYLPSGCLR-------------------DFLQRHRARLDAS 114
Query: 393 SALDYLHHDCQPI-------TTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTS 443
L Y C+ + H DL NIL++ E + DFGLA+ LP +
Sbjct: 115 RLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 174
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
G + I + APE + S DV+S+G+++ EL
Sbjct: 175 EPG-QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFN---LHHHRASRSFIAECRALR 322
+D + ++G GSFG V +L + + T VKV + + S + E + L+
Sbjct: 25 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N++K++ ++ + LV E G L + + R EVD A
Sbjct: 82 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------- 129
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS---HVGDFGLARFLPPTH 439
I V S + Y+H + H DLKP N+LL+ + + DFGL+ TH
Sbjct: 130 ---RIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-----TH 178
Query: 440 VQTSSIGVKGSIG---YIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ S +K IG YIAPE G+ DV+S G+++ L+
Sbjct: 179 FEASK-KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILL 221
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 38/218 (17%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E + L+++ +VK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 77
Query: 334 TACSGVDY-QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
GV Y G LV E++ +G L + LQR +D +
Sbjct: 78 ---RGVSYGPGRQSLRLVMEYLPSGCLR-------------------DFLQRHRARLDAS 115
Query: 393 SALDYLHHDCQPI-------TTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTS 443
L Y C+ + H DL NIL++ E + DFGLA+ LP +
Sbjct: 116 RLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 175
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
G + I + APE + S DV+S+G+++ EL
Sbjct: 176 EPG-QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 38/218 (17%)
Query: 278 IGTGSFGSV----YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF 333
+G G+FGSV Y + D V VK R F E + L+++ +VK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 89
Query: 334 TACSGVDY-QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
GV Y G LV E++ +G L + LQR +D +
Sbjct: 90 ---RGVSYGPGRQSLRLVMEYLPSGCLR-------------------DFLQRHRARLDAS 127
Query: 393 SALDYLHHDCQPI-------TTHCDLKPSNILLDEEMVSHVGDFGLARFLP--PTHVQTS 443
L Y C+ + H DL NIL++ E + DFGLA+ LP +
Sbjct: 128 RLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 187
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
G + I + APE + S DV+S+G+++ EL
Sbjct: 188 EPG-QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 103/261 (39%), Gaps = 56/261 (21%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRALR 322
+ F IG G++G VYK R +T +V L R + I E L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 323 SIRHRNLVKVFTACSG-------VDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA 375
+ H N+VK+ ++ D K FM +L P+ +
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKT----FMDASALTGIPLPLIKS------ 106
Query: 376 PRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-F 434
LLQ L A + H H DLKP N+L++ E + DFGLAR F
Sbjct: 107 -YLFQLLQGL--------AFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAF 152
Query: 435 LPPTHVQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
P T + ++ Y APE LG + ST D++S G + E++ R+ +F G
Sbjct: 153 GVPVRTYTHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPG 205
Query: 494 DMNLHN----FARMALPDHVM 510
D + F + PD V+
Sbjct: 206 DSEIDQLFRIFRTLGTPDEVV 226
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 40/232 (17%)
Query: 276 NLIGTGSFGSVYK----GVLDEGRT-TVTVKVFNLHHHRASR-SFIAECRALRSI-RHRN 328
++G+G+FG V G+ G + V VK+ + R + ++E + + + H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 329 LVKVFTAC--SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNR---EDEVD-------KAP 376
+V + AC SG Y L++E+ G L +L EDE++ +
Sbjct: 111 IVNLLGACTLSGPIY-------LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 377 RNLNLL---QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR 433
+LN+L L A VA +++L H DL N+L+ V + DFGLAR
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR 220
Query: 434 FLPPTHVQTSSIGVKGS----IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ + S+ V+G+ + ++APE + DV+SYGIL+ E+
Sbjct: 221 DI----MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 84/222 (37%), Gaps = 25/222 (11%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVF---NLHHHRASRSFIAECRALRSIRH 326
D F +G G FG+VY + + + +KV L E +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+++++ + L+ EF G L + L R DE A
Sbjct: 75 PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA----------T 119
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
++A AL Y H + H D+KP N+L+ + + DFG + P +
Sbjct: 120 FMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC-- 174
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSD 488
G++ Y+ PE G D++ G+L E ++ P D
Sbjct: 175 --GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 25/222 (11%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVF---NLHHHRASRSFIAECRALRSIRH 326
D F +G G FG+VY + + + +KV L E +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+++++ + L+ EF G L + L R DE R+ ++ L
Sbjct: 74 PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ----RSATFMEEL- 123
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A AL Y H + H D+KP N+L+ + + DFG + P +
Sbjct: 124 -----ADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC-- 173
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSD 488
G++ Y+ PE G D++ G+L E ++ P D
Sbjct: 174 --GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
++ +IG GSFG VY+ L D G KV + E + +R + H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 75
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
V++ Y + K +VY + + E +Y V R +A + L ++
Sbjct: 76 VRL----RYFFYSSGEKKDVVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 129
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGVK 448
+ +L Y+H H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 130 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI--- 183
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 226
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + ++ V VK+ + H + ++E + + + +H N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLY------------PVNREDEVDKAP-R 377
+ AC+ G ++ E+ G L +L P + +DK R
Sbjct: 99 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 378 NLNLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP 436
L L L+ + VA + +L +C H D+ N+LL V+ +GDFGLAR +
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDI- 208
Query: 437 PTHVQTSSIGVKGS----IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ S+ VKG+ + ++APE + DV+SYGIL+ E+
Sbjct: 209 ---MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 254
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVKVF 333
IG G FG V++G+ + V +K N F+ E +R H ++VK+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
GV + + ++ E G L +L +V K +L+L + A +++
Sbjct: 458 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKF--SLDLASLILYAYQLST 502
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGY 453
AL YL H D+ N+L+ +GDFGL+R++ + +S G K I +
Sbjct: 503 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 558
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRK-KPSDIMFEGDMN------LHNFARMALP 506
+APE ++ DV+ +G+ M E+++ KP F+G N + N R+ +P
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMP 614
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSIRHRNLVKVF 333
IG G FG V++G+ + V +K N F+ E +R H ++VK+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
GV + + ++ E G L +L +V K +L+L + A +++
Sbjct: 458 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKF--SLDLASLILYAYQLST 502
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGY 453
AL YL H D+ N+L+ +GDFGL+R++ + +S G K I +
Sbjct: 503 ALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 558
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRK-KPSDIMFEGDMN------LHNFARMALP 506
+APE ++ DV+ +G+ M E+++ KP F+G N + N R+ +P
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPMP 614
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 27/217 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA--ECRALRSIRHR 327
+ + IG GS+G V+K + V +K F IA E R L+ ++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
NLV + ++ LV+E+ + L E +D+ R + +I
Sbjct: 63 NLVNLLEV-----FRRKRRLHLVFEYCDHTVLHE----------LDRYQRGVPEHLVKSI 107
Query: 388 AIDVASALDYLH-HDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP-PTHVQTSSI 445
A+++ H H+C H D+KP NIL+ + V + DFG AR L P+ +
Sbjct: 108 TWQTLQAVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV 163
Query: 446 GVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELI 481
+ Y +PE +G ++ DV++ G + EL+
Sbjct: 164 ATR---WYRSPELLVGDTQYGPPVDVWAIGCVFAELL 197
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 25/222 (11%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVF---NLHHHRASRSFIAECRALRSIRH 326
D F +G G FG+VY + + + +KV L E +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+++++ + L+ EF G L + L R DE R+ ++ L
Sbjct: 74 PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ----RSATFMEEL- 123
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A AL Y H + H D+KP N+L+ + + DFG + P +
Sbjct: 124 -----ADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC-- 173
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSD 488
G++ Y+ PE G D++ G+L E ++ P D
Sbjct: 174 --GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRASRSFIAECRALRSIRHRNLVKVFTAC 336
IG G++G VYK + G T K+ + I E L+ ++H N+VK++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
LV+E + + + +D L + + + + + +
Sbjct: 70 -----HTKKRLVLVFEHLDQ----------DLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSIGVKGSIGYIA 455
Y H H DLKP N+L++ E + DFGLAR F P T + ++ Y A
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV---VTLWYRA 168
Query: 456 PEYGLGS-EVSTNGDVYSYGILMLELI 481
P+ +GS + ST D++S G + E++
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 93/235 (39%), Gaps = 27/235 (11%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN---LHHHRASRSFIAECRALRSIRH 326
D F ++G GSFG V + E VKV + + E R L R+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
+ C +Q D V EF+ G L ++ + + D+A
Sbjct: 83 HPFLTQLFCC----FQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARF------- 128
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
A ++ SAL +LH + DLK N+LLD E + DFG+ + V T++
Sbjct: 129 YAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC 185
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP-----SDIMFEGDMN 496
G+ YIAPE D ++ G+L+ E++ P D +FE +N
Sbjct: 186 --GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPT-HVQTS 443
+ + D AL++ H + H D+KP+NIL+ V DFG+AR + + +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
+ V G+ Y++PE G V DVYS G ++ E++ + P F GD
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRASRSFIAECRALRSIRHRNLVKVFTAC 336
IG G++G VYK + G T K+ + I E L+ ++H N+VK++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
LV+E + + + +D L + + + + + +
Sbjct: 70 -----HTKKRLVLVFEHLDQ----------DLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSIGVKGSIGYIA 455
Y H H DLKP N+L++ E + DFGLAR F P T + ++ Y A
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV---VTLWYRA 168
Query: 456 PEYGLGS-EVSTNGDVYSYGILMLELI 481
P+ +GS + ST D++S G + E++
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
A +V AL+YLH + DLKP NILLD+ + DFG A+++P + +
Sbjct: 112 AAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----TYXL 163
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ YIAPE + + D +S+GIL+ E++ P
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFN---LHHHRASRSFIAECRALR 322
+D + ++G GSFG V +L + + T VKV + + S + E + L+
Sbjct: 48 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N++K++ ++ + LV E G L + + R EVD A
Sbjct: 105 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------- 152
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS---HVGDFGLARFLPPTH 439
I V S + Y+H + H DLKP N+LL+ + + DFGL+ TH
Sbjct: 153 ---RIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-----TH 201
Query: 440 VQTSSIGVKGSIG---YIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ S +K IG YIAPE G+ DV+S G+++ L+
Sbjct: 202 FEASK-KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILL 244
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFN---LHHHRASRSFIAECRALR 322
+D + ++G GSFG V +L + + T VKV + + S + E + L+
Sbjct: 49 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N++K++ ++ + LV E G L + + R EVD A
Sbjct: 106 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------- 153
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS---HVGDFGLARFLPPTH 439
I V S + Y+H + H DLKP N+LL+ + + DFGL+ TH
Sbjct: 154 ---RIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-----TH 202
Query: 440 VQTSSIGVKGSIG---YIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ S +K IG YIAPE G+ DV+S G+++ L+
Sbjct: 203 FEASK-KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILL 245
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 21/215 (9%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
++ IG G+ G+VY + V ++ NL I E +R ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ Y D +V E++ GSL + V E +D+ Q + +
Sbjct: 83 YLDS-----YLVGDELWVVMEYLAGGSLTD----VVTETCMDEG-------QIAAVCREC 126
Query: 392 ASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSI 451
AL++LH + H ++K NILL + + DFG + P + S++ G+
Sbjct: 127 LQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--VGTP 181
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
++APE D++S GI+ +E+I + P
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
IA+ + AL++LH I H D+KPSN+L++ + DFG++ +L + +T
Sbjct: 157 KIAVSIVKALEHLHSKLSVI--HRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 446 GVKGSIGYIAPEYGLGSEVSTNG-----DVYSYGILMLELIIRKKPSD 488
G K Y+APE + E++ G D++S GI M+EL I + P D
Sbjct: 215 GCK---PYMAPER-INPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 104/263 (39%), Gaps = 56/263 (21%)
Query: 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-------ASRSFIAECRA 320
+ + F IG G++G VYK R +T +V L R + I E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA-----RNKLTGEVVALKKIRLDTETEGVPSTAIREISL 58
Query: 321 LRSIRHRNLVKVFTACSG-------VDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVD 373
L+ + H N+VK+ ++ D K +FM +L P+ +
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLK----KFMDASALTGIPLPLIKS---- 110
Query: 374 KAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR 433
LLQ L A + H H DLKP N+L++ E + DFGLAR
Sbjct: 111 ---YLFQLLQGL--------AFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLAR 154
Query: 434 -FLPPTHVQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMF 491
F P + ++ Y APE LG + ST D++S G + E++ R+ +F
Sbjct: 155 AFGVPVRTYXHEV---VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LF 207
Query: 492 EGDMNLHN----FARMALPDHVM 510
GD + F + PD V+
Sbjct: 208 PGDSEIDQLFRIFRTLGTPDEVV 230
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRN 328
D F + +G G+ G V+K + K+ +L A R I E + L
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V + G Y + ++ E M GSL++ L R E +L +++IA
Sbjct: 128 IVGFY----GAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPE--------QILGKVSIA 174
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
V L YL + H D+KPSNIL++ + DFG++ L + + +
Sbjct: 175 --VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV 226
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ Y++PE G+ S D++S G+ ++E+ + + P
Sbjct: 227 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 22/218 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRN 328
D F + +G G+ G V K + K+ +L A R I E + L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V + A + + ++ E M GSL++ L R E +L +++IA
Sbjct: 76 IVGFYGA-----FYSDGEISICMEHMDGGSLDQVLKEAKRIPE--------EILGKVSIA 122
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
V L YL Q H D+KPSNIL++ + DFG++ L + + +
Sbjct: 123 --VLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV 174
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ Y+APE G+ S D++S G+ ++EL + + P
Sbjct: 175 GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRN 328
D F + +G G+ G V+K + K+ +L A R I E + L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V + A + + ++ E M GSL++ L R E +L +++IA
Sbjct: 66 IVGFYGA-----FYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QILGKVSIA 112
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
V L YL + H D+KPSNIL++ + DFG++ L + + +
Sbjct: 113 --VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV 164
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ Y++PE G+ S D++S G+ ++E+ + + P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRN 328
D F + +G G+ G V+K + K+ +L A R I E + L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V + A + + ++ E M GSL++ L R E +L +++IA
Sbjct: 66 IVGFYGA-----FYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QILGKVSIA 112
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
V L YL + H D+KPSNIL++ + DFG++ L + + +
Sbjct: 113 --VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV 164
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ Y++PE G+ S D++S G+ ++E+ + + P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRN 328
D F + +G G+ G V+K + K+ +L A R I E + L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V + A + + ++ E M GSL++ L R E +L +++IA
Sbjct: 66 IVGFYGA-----FYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QILGKVSIA 112
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
V L YL + H D+KPSNIL++ + DFG++ L + + +
Sbjct: 113 --VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV 164
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ Y++PE G+ S D++S G+ ++E+ + + P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRN 328
D F + +G G+ G V+K + K+ +L A R I E + L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V + A + + ++ E M GSL++ L R E +L +++IA
Sbjct: 66 IVGFYGA-----FYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QILGKVSIA 112
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
V L YL + H D+KPSNIL++ + DFG++ L + + +
Sbjct: 113 --VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV 164
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ Y++PE G+ S D++S G+ ++E+ + + P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 36/251 (14%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSIRH 326
+ F +G G FG+VY + + + +KV F +A E +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+++++ + L+ E+ G++ L ++R DE QR
Sbjct: 72 PNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSRFDE-----------QRTA 115
Query: 387 IAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 116 TYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT--- 169
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA- 504
+ G++ Y+ PE G D++S G+L E ++ P FE + R++
Sbjct: 170 -LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP----FEAHTYQETYRRISR 224
Query: 505 ----LPDHVMD 511
PD V +
Sbjct: 225 VEFTFPDFVTE 235
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRN 328
D F + +G G+ G V+K + K+ +L A R I E + L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V + A + + ++ E M GSL++ L R E +L +++IA
Sbjct: 66 IVGFYGA-----FYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QILGKVSIA 112
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
V L YL + H D+KPSNIL++ + DFG++ L + + +
Sbjct: 113 --VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV 164
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ Y++PE G+ S D++S G+ ++E+ + + P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L + RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 134
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
++ +IG GSFG VY+ L D G KV + E + +R + H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 76
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
V++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 77 VRL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 130
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGVK 448
+ +L Y+H H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 131 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI--- 184
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 185 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 227
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 36/251 (14%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-FNLHHHRA--SRSFIAECRALRSIRH 326
+ F +G G FG+VY + + + +KV F +A E +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+++++ + L+ E+ G++ L ++R DE QR
Sbjct: 72 PNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSRFDE-----------QRTA 115
Query: 387 IAI-DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
I ++A+AL Y H H D+KP N+LL + DFG + P + T
Sbjct: 116 TYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT--- 169
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA- 504
+ G++ Y+ PE G D++S G+L E ++ P FE + R++
Sbjct: 170 -LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP----FEAHTYQETYRRISR 224
Query: 505 ----LPDHVMD 511
PD V +
Sbjct: 225 VEFTFPDFVTE 235
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRN 328
D F + +G G+ G V+K + K+ +L A R I E + L
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V + A + + ++ E M GSL++ L R E +L +++IA
Sbjct: 93 IVGFYGA-----FYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QILGKVSIA 139
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
V L YL + H D+KPSNIL++ + DFG++ L + + +
Sbjct: 140 --VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV 191
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ Y++PE G+ S D++S G+ ++E+ + + P
Sbjct: 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
++ +IG GSFG VY+ L D G KV + E + +R + H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 75
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
V++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 76 VRL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 129
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGVK 448
+ +L Y+H H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 130 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI--- 183
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 226
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 24/226 (10%)
Query: 272 FSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLV 330
++ +IG GSFG VY+ L D G KV + E + +R + H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIV 80
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 81 RL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 134
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGVKG 449
+ +L Y+H H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 135 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---C 188
Query: 450 SIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 230
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECR-ALRSIRH--RN 328
+ ++IG G V + V VK+ + R S + E R A R H R
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 329 LVKVFTACSGVD-YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
+ + +D Y+ + F LV++ M+ G L ++L +K L+ + +I
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL--------TEKVA--LSEKETRSI 205
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ A+ +LH + H DLKP NILLD+ M + DFG + L P +
Sbjct: 206 MRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE---L 259
Query: 448 KGSIGYIAPEY----------GLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ GY+APE G G EV D+++ G+++ L+ P
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEV----DLWACGVILFTLLAGSPP 304
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
++ +IG GSFG VY+ L D G KV + E + +R + H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 75
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
V++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 76 VRL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 129
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGVK 448
+ +L Y+H H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 130 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI--- 183
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 226
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
++ +IG GSFG VY+ L D G KV + E + +R + H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 94
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
V++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 95 VRL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 148
Query: 390 DVASALDYLHHD--CQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIG 446
+ +L Y+H C H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 149 QLFRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI- 202
Query: 447 VKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 203 --CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 245
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRN 328
D F + +G G+ G V+K + K+ +L A R I E + L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V + A + + ++ E M GSL++ L R E +L +++IA
Sbjct: 85 IVGFYGA-----FYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QILGKVSIA 131
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
V L YL + H D+KPSNIL++ + DFG++ L + + +
Sbjct: 132 --VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFV 183
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ Y++PE G+ S D++S G+ ++E+ + + P
Sbjct: 184 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
++ +IG GSFG VY+ L D G KV + E + +R + H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 87
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
V++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 88 VRL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 141
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGVK 448
+ +L Y+H H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 142 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI--- 195
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 196 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 238
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 24/221 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN---LHHHRASRSFIAECRALR-SIR 325
+ F ++G GSFG V+ + +K + + E R L +
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H L +F C+ +Q + V E++ G L +Y + ++ +L +
Sbjct: 78 HPFLTHMF--CT---FQTKENLFFVMEYLNGGDL---MYHI-------QSCHKFDLSRAT 122
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
A ++ L +LH + DLK NILLD++ + DFG+ + +T+
Sbjct: 123 FYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEF 179
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ YIAPE LG + + + D +S+G+L+ E++I + P
Sbjct: 180 C--GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
++ +IG GSFG VY+ L D G KV + E + +R + H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 83
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
V++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 84 VRL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 137
Query: 390 DVASALDYLHHD--CQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIG 446
+ +L Y+H C H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 138 QLFRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI- 191
Query: 447 VKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 192 --CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 234
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
++ +IG GSFG VY+ L D G KV + E + +R + H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 87
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
V++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 88 VRL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 141
Query: 390 DVASALDYLHHD--CQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIG 446
+ +L Y+H C H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 142 QLFRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI- 195
Query: 447 VKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 196 --CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 238
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 108/265 (40%), Gaps = 31/265 (11%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 130
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDH 508
+ Y APE L S+ T D++S G ++ E++ + +F G L +H
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPGKHYLDQL------NH 237
Query: 509 VMDIVDSTLLNDVEDLAIISNQRQR 533
++ I+ S + EDL I N + R
Sbjct: 238 ILGILGSP---EQEDLNCIINLKAR 259
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 25/223 (11%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
TD + +G G+F V + V K+ N R + E R R ++H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+V++ + S F LV++ + G L E + E D + +L+ +N
Sbjct: 90 PNIVRLHDSISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 144
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE---MVSHVGDFGLARFLPPTHVQTS 443
H Q H DLKP N+LL + + DFGLA + Q +
Sbjct: 145 -------------HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQA 189
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G G+ GY++PE D+++ G+++ L++ P
Sbjct: 190 WFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
++ +IG GSFG VY+ L D G KV + E + +R + H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 75
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
V++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 76 VRL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 129
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGVK 448
+ +L Y+H H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 130 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI--- 183
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 226
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 43/239 (17%)
Query: 268 ATDGFSSANLIGTGSFGSVYKG--VLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR 325
A+D F ++G G+FG V K LD R K+ H + ++E L S+
Sbjct: 5 ASD-FEEIAVLGQGAFGQVVKARNALD-SRYYAIKKI--RHTEEKLSTILSEVXLLASLN 60
Query: 326 HRNLVKVFTAC----------SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKA 375
H+ +V+ + A + V + F + E+ +N +L + ++ N + D+
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLF--IQXEYCENRTLYDLIHSENLNQQRDEY 118
Query: 376 PRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-- 433
R + + AL Y+H Q I H +LKP NI +DE +GDFGLA+
Sbjct: 119 WR---------LFRQILEALSYIH--SQGII-HRNLKPXNIFIDESRNVKIGDFGLAKNV 166
Query: 434 -------FLPPTHVQTSSIGVKGSIG---YIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
L ++ SS + +IG Y+A E G+ + D YS GI+ E I
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 132
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L + RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 134
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG 449
++A ALD+LH + DLKP NILLDEE + DFGL++ + + G
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 188
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
++ Y+APE + + D +S+G+LM E++
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 220
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 134
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG 449
++A ALD+LH + DLKP NILLDEE + DFGL++ + + G
Sbjct: 135 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 189
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
++ Y+APE + + D +S+G+LM E++
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 221
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG 449
++A LD+LH + DLKP NILLDEE + DFGL++ + + G
Sbjct: 138 ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCG 192
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
++ Y+APE S + D +SYG+LM E++
Sbjct: 193 TVEYMAPEVVNRQGHSHSADWWSYGVLMFEML 224
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 278 IGTGSFGSVYKGV--LDEGRTTVTVKVFNLHHHRA-SRSFIAECRALRSIRHRNLVKVFT 334
+G G+FGSV +GV + + + V +KV +A + + E + + + + +V++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 335 ACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASA 394
C + LV E G L ++L V + +E+ LL ++++ +
Sbjct: 78 VCQA------EALMLVMEMAGGGPLHKFL--VGKREEIP-VSNVAELLHQVSMGMKYLEE 128
Query: 395 LDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSIG 452
+++H D L N+LL + + DFGL++ L ++ S G K +
Sbjct: 129 KNFVHRD---------LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPLK 178
Query: 453 YIAPEYGLGSEVSTNGDVYSYGILMLE-LIIRKKPSDIM 490
+ APE + S+ DV+SYG+ M E L +KP M
Sbjct: 179 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 140
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 141 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 230
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 132
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 272 FSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLV 330
++ +IG GSFG VY+ L D G KV + E + +R + H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIV 110
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 111 RL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 164
Query: 391 VASALDYLHHD--CQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGV 447
+ +L Y+H C H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 165 LFRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI-- 217
Query: 448 KGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 218 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 260
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 132
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
++ +IG GSFG VY+ L D G KV + E + +R + H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 88
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
V++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 89 VRL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMY 142
Query: 390 DVASALDYLHHD--CQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIG 446
+ +L Y+H C H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 143 QLFRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI- 196
Query: 447 VKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 197 --CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 239
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 152
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 132
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 132
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 272 FSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLV 330
++ +IG GSFG VY+ L D G KV + E + +R + H N+V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIV 81
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 82 RL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 135
Query: 391 VASALDYLHHD--CQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGV 447
+ +L Y+H C H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 136 LFRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI-- 188
Query: 448 KGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 189 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 231
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 136
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK-G 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 137
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK-G 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 26/228 (11%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFI-AECRALRSIRHRN 328
++ +IG GSFG VY+ L D G KV ++F E + +R + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------GKAFKNRELQIMRKLDHCN 74
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 75 IVRL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM 128
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGV 447
+ +L Y+H H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 129 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI-- 183
Query: 448 KGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 184 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 226
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 71/158 (44%), Gaps = 34/158 (21%)
Query: 341 YQGNDFKALVYEFMQNGSLEEWLYP--VNREDEVDKAPRNLNLLQRLNIAIDVASALDYL 398
Y+ N F LV++ M+ G L ++L E E K R L ++V AL L
Sbjct: 93 YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL---------LEVICALHKL 143
Query: 399 HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEY 458
+ H DLKP NILLD++M + DFG + L P S V G+ Y+APE
Sbjct: 144 N------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS---VCGTPSYLAPEI 194
Query: 459 ----------GLGSEVSTNGDVYSYGILMLELIIRKKP 486
G G EV D++S G++M L+ P
Sbjct: 195 IECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG 449
++A ALD+LH + DLKP NILLDEE + DFGL++ + + G
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 188
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
++ Y+APE + + D +S+G+LM E++
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 220
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 136
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 26/228 (11%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFI-AECRALRSIRHRN 328
++ +IG GSFG VY+ L D G KV ++F E + +R + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------GKAFKNRELQIMRKLDHCN 74
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 75 IVRL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYM 128
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGV 447
+ +L Y+H H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 129 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI-- 183
Query: 448 KGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 184 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 130
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 42/226 (18%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI--RHRNLVKVFTA 335
+G G +G V++G+ +V VK+F+ R +S+ E ++ RH N++ F A
Sbjct: 16 VGKGRYGEVWRGLWHG--ESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILG-FIA 69
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+ L+ + ++GSL ++L E + L +A+ A L
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA-----------LRLAVSAACGL 118
Query: 396 DYLHHDC-----QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS---SIGV 447
+LH + +P H D K N+L+ + + D GLA H Q S IG
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM----HSQGSDYLDIGN 174
Query: 448 KGSIG---YIAPEYGLGSEVSTN-------GDVYSYGILMLELIIR 483
+G Y+APE L ++ T+ D++++G+++ E+ R
Sbjct: 175 NPRVGTKRYMAPEV-LDEQIRTDCFESYKWTDIWAFGLVLWEIARR 219
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 42/226 (18%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI--RHRNLVKVFTA 335
+G G +G V++G +G V VK+F+ R +S+ E ++ RH N++ F A
Sbjct: 45 VGKGRYGEVWRGSW-QGEN-VAVKIFS---SRDEKSWFRETELYNTVMLRHENILG-FIA 98
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+ L+ + + GSL ++L L+ + L I + +AS L
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----------LDTVSCLRIVLSIASGL 147
Query: 396 DYLHHDC-----QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS---IGV 447
+LH + +P H DLK NIL+ + + D GLA H Q+++ +G
Sbjct: 148 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM----HSQSTNQLDVGN 203
Query: 448 KGSIG---YIAPEYGLGSEVSTNG-------DVYSYGILMLELIIR 483
+G Y+APE L + + D++++G+++ E+ R
Sbjct: 204 NPRVGTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 137
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 138
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 139 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 228
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 129
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 130 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 219
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 136
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 22/222 (9%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSIRHRN 328
D F + +G G+ G V+K + K+ +L A R I E + L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V + A + + ++ E M GSL++ L R E +L +++IA
Sbjct: 69 IVGFYGA-----FYSDGEISICMEHMDGGSLDQVLKKAGRIPE--------QILGKVSIA 115
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
V L YL + H D+KPSNIL++ + DFG++ L + +
Sbjct: 116 --VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDEMANEFV 167
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIM 490
G+ Y++PE G+ S D++S G+ ++E+ + + P M
Sbjct: 168 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPM 209
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 136
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 272 FSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLV 330
++ +IG GSFG VY+ L D G KV + E + +R + H N+V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIV 155
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 156 RL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 209
Query: 391 VASALDYLHHD--CQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGV 447
+ +L Y+H C H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 210 LFRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI-- 262
Query: 448 KGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 263 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 305
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTV-KVFNLHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V + K+ H + + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFLYQ------- 136
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 272 FSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLV 330
++ +IG GSFG VY+ L D G KV + E + +R + H N+V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIV 104
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 105 RL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 158
Query: 391 VASALDYLHHD--CQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGV 447
+ +L Y+H C H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 159 LFRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI-- 211
Query: 448 KGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 212 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 254
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 99/228 (43%), Gaps = 36/228 (15%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA----ECRALRSIRHRN---LV 330
+G+G++G+V V +GRT V + L+ S F E R L+ +RH N L+
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
VFT +D DF LV FM L + + +++ + + Q L
Sbjct: 91 DVFTPDETLD-DFTDF-YLVMPFMGTD-----LGKLMKHEKLGEDRIQFLVYQMLK---- 139
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS 450
L Y+H H DLKP N+ ++E+ + DFGLAR + G +
Sbjct: 140 ---GLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVT 188
Query: 451 IGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSDIMFEGDMNL 497
Y APE L T D++S G +M E+I K +F+G +L
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK----TLFKGSDHL 232
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
F +G GS+GSVYK + E V +K + + I E ++ ++VK
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVK 88
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNR---EDEVDKAPRNLNLLQRLNIA 388
+ G ++ D +V E+ GS+ + + N+ EDE+ +LQ
Sbjct: 89 YY----GSYFKNTDL-WIVMEYCGAGSVSDIIRLRNKTLTEDEI------ATILQ----- 132
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
L+YLH + H D+K NILL+ E + + DFG+A L T V
Sbjct: 133 -STLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVI 186
Query: 449 GSIGYIAPEYGLGSEVSTN--GDVYSYGILMLELIIRKKP 486
G+ ++APE + E+ N D++S GI +E+ K P
Sbjct: 187 GTPFWMAPE--VIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 272 FSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLV 330
++ +IG GSFG VY+ L D G KV + E + +R + H N+V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIV 114
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 115 RL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 168
Query: 391 VASALDYLHHD--CQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGV 447
+ +L Y+H C H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 169 LFRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI-- 221
Query: 448 KGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 222 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 264
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 272 FSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLV 330
++ +IG GSFG VY+ L D G KV + E + +R + H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIV 110
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 111 RL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 164
Query: 391 VASALDYLHHD--CQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGV 447
+ +L Y+H C H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 165 LFRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI-- 217
Query: 448 KGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 218 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 260
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 353 FMQNGSLEEWLYPVNREDEVD---KAPRNLNLLQRLNIAIDVASALDYLH-HDCQPITTH 408
F ++ SL + V E++ D K P + L ++ + VA +++L C H
Sbjct: 173 FQEDKSLSD----VEEEEDSDGFYKEPITMEDL--ISYSFQVARGMEFLSSRKC----IH 222
Query: 409 CDLKPSNILLDEEMVSHVGDFGLAR--FLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVST 466
DL NILL E V + DFGLAR + P +V+ + + ++APE ST
Sbjct: 223 RDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL--PLKWMAPESIFDKIYST 280
Query: 467 NGDVYSYGILMLELI 481
DV+SYG+L+ E+
Sbjct: 281 KSDVWSYGVLLWEIF 295
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 272 FSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLV 330
++ +IG GSFG VY+ L D G KV + E + +R + H N+V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIV 112
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
++ Y + K VY + + E +Y V R +A + L ++
Sbjct: 113 RL----RYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 166
Query: 391 VASALDYLHHD--CQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGV 447
+ +L Y+H C H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 167 LFRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI-- 219
Query: 448 KGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 220 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 262
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 44/227 (19%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLH-------HHRASRSFIAECRALRSIRHRNLV 330
+G GSFG V + + V +K + H R R E L+ +RH +++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVER----EISYLKLLRHPHII 72
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
K++ + D +V E+ G L +++ R E D+ R
Sbjct: 73 KLYDVIT----TPTDI-VMVIEY-AGGELFDYIVEKKRMTE-DEGRRFFQ---------Q 116
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS 450
+ A++Y H + H DLKP N+LLD+ + + DFGL+ + + +S GS
Sbjct: 117 IICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GS 170
Query: 451 IGYIAPE------YGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMF 491
Y APE Y G EV DV+S GI++ +++ + P D F
Sbjct: 171 PNYAAPEVINGKLYA-GPEV----DVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
A ++ L+ LH + + DLKP NILLD+ + D GLA +P +
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-- 346
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G++GY+APE + + D ++ G L+ E+I + P
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 42/226 (18%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI--RHRNLVKVFTA 335
+G G +G V++G +G V VK+F+ R +S+ E ++ RH N++ F A
Sbjct: 16 VGKGRYGEVWRGSW-QGEN-VAVKIFS---SRDEKSWFRETELYNTVMLRHENILG-FIA 69
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+ L+ + + GSL ++L L+ + L I + +AS L
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----------LDTVSCLRIVLSIASGL 118
Query: 396 DYLHHDC-----QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS---IGV 447
+LH + +P H DLK NIL+ + + D GLA H Q+++ +G
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM----HSQSTNQLDVGN 174
Query: 448 KGSIG---YIAPEYGLGSEVSTNG-------DVYSYGILMLELIIR 483
+G Y+APE L + + D++++G+++ E+ R
Sbjct: 175 NPRVGTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
A ++ L+ LH + + DLKP NILLD+ + D GLA +P +
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-- 346
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G++GY+APE + + D ++ G L+ E+I + P
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI--RHRNLVKVFTA 335
IG G +G V+ G + V VKVF S+ E +++ RH N++ A
Sbjct: 45 IGKGRYGEVWMGKWRGEK--VAVKVF---FTTEEASWFRETEIYQTVLMRHENILGFIAA 99
Query: 336 CSGVDYQGNDFKALVY---EFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
D +G +Y ++ +NGSL ++L L+ L +A
Sbjct: 100 ----DIKGTGSWTQLYLITDYHENGSLYDYL-----------KSTTLDAKSMLKLAYSSV 144
Query: 393 SALDYLHHDC-----QPITTHCDLKPSNILLDEEMVSHVGDFGLA-RFLPPT-HVQTSSI 445
S L +LH + +P H DLK NIL+ + + D GLA +F+ T V
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPN 204
Query: 446 GVKGSIGYIAPEYGLGSEVSTN-------GDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498
G+ Y+ PE L ++ N D+YS+G+++ E+ R I+ E + H
Sbjct: 205 TRVGTKRYMPPEV-LDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263
Query: 499 NF 500
+
Sbjct: 264 DL 265
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 24/221 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN---LHHHRASRSFIAECRALR-SIR 325
+ F ++G GSFG V+ + +K + + E R L +
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H L +F C+ +Q + V E++ G L +Y + ++ +L +
Sbjct: 77 HPFLTHMF--CT---FQTKENLFFVMEYLNGGDL---MYHI-------QSCHKFDLSRAT 121
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
A ++ L +LH + DLK NILLD++ + DFG+ + +T+
Sbjct: 122 FYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF 178
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ YIAPE LG + + + D +S+G+L+ E++I + P
Sbjct: 179 C--GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F IGTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E+M G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIKVADFGFAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F IGTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E+M G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIKVADFGFAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 42/226 (18%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI--RHRNLVKVFTA 335
+G G +G V++G +G V VK+F+ R +S+ E ++ RH N++ F A
Sbjct: 16 VGKGRYGEVWRGSW-QGEN-VAVKIFS---SRDEKSWFRETELYNTVMLRHENILG-FIA 69
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+ L+ + + GSL ++L L+ + L I + +AS L
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----------LDTVSCLRIVLSIASGL 118
Query: 396 DYLHHDC-----QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS---IGV 447
+LH + +P H DLK NIL+ + + D GLA H Q+++ +G
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM----HSQSTNQLDVGN 174
Query: 448 KGSIG---YIAPEYGLGSEVSTNG-------DVYSYGILMLELIIR 483
+G Y+APE L + + D++++G+++ E+ R
Sbjct: 175 NPRVGTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 26/215 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--RSFIAECRALRSIRHRNLVKVFTA 335
IG G+F V V VK+ + +S + E R ++ + H N+VK+F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+ LV E+ G + ++L R E + + + SA+
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ----------IVSAV 126
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLA-RFLPPTHVQTSSIGVKGSIGYI 454
Y H Q H DLK N+LLD +M + DFG + F + T GS Y
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPPYA 179
Query: 455 APEYGLGSEVS-TNGDVYSYGILMLELIIRKKPSD 488
APE G + DV+S G+++ L+ P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 25/206 (12%)
Query: 281 GSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVD 340
G FG VYK E KV + ++ E L S H N+VK+ A
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF---- 76
Query: 341 YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHH 400
Y N+ L+ EF G+++ + + R P + +Q + AL+YLH
Sbjct: 77 YYENNLWILI-EFCAGGAVDAVMLELER-------PLTESQIQV--VCKQTLDALNYLHD 126
Query: 401 DCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL 460
+ H DLK NIL + + DFG++ T +Q + G+ ++APE +
Sbjct: 127 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-GTPYWMAPEVVM 182
Query: 461 GSEVSTN------GDVYSYGILMLEL 480
E S + DV+S GI ++E+
Sbjct: 183 -CETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 26/215 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--RSFIAECRALRSIRHRNLVKVFTA 335
IG G+F V V VK+ + +S + E R ++ + H N+VK+F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+ LV E+ G + ++L R E + + + SA+
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ----------IVSAV 126
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLA-RFLPPTHVQTSSIGVKGSIGYI 454
Y H Q H DLK N+LLD +M + DFG + F + T GS Y
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPPYA 179
Query: 455 APEYGLGSEVS-TNGDVYSYGILMLELIIRKKPSD 488
APE G + DV+S G+++ L+ P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 89/230 (38%), Gaps = 52/230 (22%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNL- 329
+++ + IG G++G V + + V +K + H + + E + L RH N+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 330 ----------------VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVD 373
V + T G D +K L + + N + +LY + R
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADL----YKLLKTQHLSNDHICYFLYQILR----- 155
Query: 374 KAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR 433
L Y+H H DLKPSN+LL+ + DFGLAR
Sbjct: 156 --------------------GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR 192
Query: 434 FLPPTHVQTSSIG-VKGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
P H T + + Y APE L S+ T D++S G ++ E++
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G+FG VYK E KV + ++ E L S H N+VK+ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF- 103
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y N+ L+ EF G+++ + + R P + +Q + AL+Y
Sbjct: 104 ---YYENNLWILI-EFCAGGAVDAVMLELER-------PLTESQIQV--VCKQTLDALNY 150
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGL-ARFLPPTHVQTSSIGVKGSIGYIAP 456
LH + H DLK NIL + + DFG+ A+ + S I G+ ++AP
Sbjct: 151 LHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI---GTPYWMAP 204
Query: 457 EYGLGSEVSTN------GDVYSYGILMLEL 480
E + E S + DV+S GI ++E+
Sbjct: 205 EVVM-CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLV 330
+++ + IG G++G V + + V +K + H + + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ + +V + M+ LY + + + L Q
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKCQHLSNDHICYFLYQ------- 136
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKG 449
+ L Y+H H DLKPSN+LL+ + DFGLAR P H T +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 450 SIGYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
+ Y APE L S+ T D++S G ++ E++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFI-AECRALRSIRHRNLVKVFTAC 336
IGTG F V V +K+ + + + I E AL+++RH+++ +++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV- 76
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNR--EDEVDKAPRNLNLLQRLNIAIDVASA 394
++ F +V E+ G L +++ +R E+E R + SA
Sbjct: 77 --LETANKIF--MVLEYCPGGELFDYIISQDRLSEEETRVVFRQ------------IVSA 120
Query: 395 LDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLA---RFLPPTHVQTSSIGVKGSI 451
+ Y+H H DLKP N+L DE + DFGL + H+QT GS+
Sbjct: 121 VAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC----GSL 173
Query: 452 GYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSD 488
Y APE G S + + DV+S GIL+ L+ P D
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G+FG VYK E KV + ++ E L S H N+VK+ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF- 103
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y N+ L+ EF G+++ + + R P + +Q + AL+Y
Sbjct: 104 ---YYENNLWILI-EFCAGGAVDAVMLELER-------PLTESQIQV--VCKQTLDALNY 150
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGL-ARFLPPTHVQTSSIGVKGSIGYIAP 456
LH + H DLK NIL + + DFG+ A+ + S I G+ ++AP
Sbjct: 151 LHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI---GTPYWMAP 204
Query: 457 EYGLGSEVSTN------GDVYSYGILMLEL 480
E + E S + DV+S GI ++E+
Sbjct: 205 EVVM-CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 34/222 (15%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFN---LHHHRASRSFIAECRALR 322
+D + ++G GSFG V +L + + T VKV + + S + E + L+
Sbjct: 25 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N+ K++ ++ + LV E G L + + R EVD A
Sbjct: 82 QLDHPNIXKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------- 129
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS---HVGDFGLARFLPPTH 439
I V S + Y H + H DLKP N+LL+ + + DFGL+ +
Sbjct: 130 ---RIIRQVLSGITYXHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I G+ YIAPE G+ DV+S G+++ L+
Sbjct: 184 KXKDKI---GTAYYIAPEVLHGT-YDEKCDVWSTGVILYILL 221
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 41/227 (18%)
Query: 278 IGTGSFGSVYKGVL-----DEGRTTVTVKVF-NLHHHRASRSFIAECRALRSI-RHRNLV 330
+G G+FG V + ++ V VK+ + H + ++E + + + +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLE-----------EWLYPVNREDEVDKAPRNL 379
+ AC+ G ++ E+ G L E+ Y + E + R+L
Sbjct: 114 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 380 NLLQRLNIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPT 438
L+ + VA + +L +C H D+ N+LL V+ +GDFGLAR +
Sbjct: 169 -----LHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDI--- 216
Query: 439 HVQTSSIGVKGS----IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ S+ VKG+ + ++APE + DV+SYGIL+ E+
Sbjct: 217 -MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 31/221 (14%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G G V+ V ++ V +K L ++ + + E + +R + H N+VKVF
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEW--LYPVNREDEVDKAPRNLNLLQRLNIAIDVA--- 392
Q D GSL E +Y V E D A N+L++ + + A
Sbjct: 79 PSGSQLTD---------DVGSLTELNSVYIVQEYMETDLA----NVLEQGPLLEEHARLF 125
Query: 393 -----SALDYLHHDCQPITTHCDLKPSNILLD-EEMVSHVGDFGLARFLPPTHVQTSSIG 446
L Y+H H DLKP+N+ ++ E++V +GDFGLAR + P + +
Sbjct: 126 MYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 447 VKGSI--GYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRK 484
+G + Y +P L T D+++ G + E++ K
Sbjct: 183 -EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 307 HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPV 366
H R S E RS+ H+++V ++ NDF +V E + SL E +
Sbjct: 63 HQREKMSM--EISIHRSLAHQHVVGFHGF-----FEDNDFVFVVLELCRRRSLLE----L 111
Query: 367 NREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426
++ + P L+++ + YLH + H DLK N+ L+E++ +
Sbjct: 112 HKRRKALTEPEARYYLRQIVLGCQ------YLHRN---RVIHRDLKLGNLFLNEDLEVKI 162
Query: 427 GDFGLARFLPPTHVQTSSIGVK---GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIR 483
GDFGLA T V+ K G+ YIAPE S DV+S G +M L++
Sbjct: 163 GDFGLA-----TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 217
Query: 484 KKPSDIMFEGDMNLHNFARM-----ALPDHVMDIVDS 515
K P FE + R+ ++P H+ + S
Sbjct: 218 KPP----FETSCLKETYLRIKKNEYSIPKHINPVAAS 250
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 307 HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPV 366
H R S E RS+ H+++V ++ NDF +V E + SL E +
Sbjct: 59 HQREKMSM--EISIHRSLAHQHVVGFHGF-----FEDNDFVFVVLELCRRRSLLE----L 107
Query: 367 NREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426
++ + P L+++ + YLH + H DLK N+ L+E++ +
Sbjct: 108 HKRRKALTEPEARYYLRQIVLGCQ------YLHRN---RVIHRDLKLGNLFLNEDLEVKI 158
Query: 427 GDFGLARFLPPTHVQTSSIGVK---GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIR 483
GDFGLA T V+ K G+ YIAPE S DV+S G +M L++
Sbjct: 159 GDFGLA-----TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
Query: 484 KKPSDIMFEGDMNLHNFARM-----ALPDHVMDIVDS 515
K P FE + R+ ++P H+ + S
Sbjct: 214 KPP----FETSCLKETYLRIKKNEYSIPKHINPVAAS 246
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 34/158 (21%)
Query: 341 YQGNDFKALVYEFMQNGSLEEWLYP--VNREDEVDKAPRNLNLLQRLNIAIDVASALDYL 398
Y+ N F LV++ M+ G L ++L E E K R L ++V AL L
Sbjct: 80 YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL---------LEVICALHKL 130
Query: 399 HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEY 458
+ H DLKP NILLD++M + DFG + L P V G+ Y+APE
Sbjct: 131 N------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE---VCGTPSYLAPEI 181
Query: 459 ----------GLGSEVSTNGDVYSYGILMLELIIRKKP 486
G G EV D++S G++M L+ P
Sbjct: 182 IECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 215
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 80/209 (38%), Gaps = 28/209 (13%)
Query: 284 GSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQG 343
G ++KG V V R SR F EC LR H N++ V AC
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS---PP 80
Query: 344 NDFKALVYEFMQNGSLEEWLYPVNREDE---VDKAPRNLNLLQRLNIAIDVASALDYLHH 400
L+ + GS LY V E VD++ Q + A+D A +L H
Sbjct: 81 APHPTLITHWXPYGS----LYNVLHEGTNFVVDQS-------QAVKFALDXARGXAFL-H 128
Query: 401 DCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL 460
+P+ L ++ +DE+ + + + S G + ++APE
Sbjct: 129 TLEPLIPRHALNSRSVXIDEDXTARISXADVK-------FSFQSPGRXYAPAWVAPEALQ 181
Query: 461 GSEVSTN---GDVYSYGILMLELIIRKKP 486
TN D +S+ +L+ EL+ R+ P
Sbjct: 182 KKPEDTNRRSADXWSFAVLLWELVTREVP 210
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 307 HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPV 366
H R S E RS+ H+++V ++ NDF +V E + SL E +
Sbjct: 59 HQREKMSM--EISIHRSLAHQHVVGFHGF-----FEDNDFVFVVLELCRRRSLLE----L 107
Query: 367 NREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426
++ + P L+++ + YLH + H DLK N+ L+E++ +
Sbjct: 108 HKRRKALTEPEARYYLRQIVLGCQ------YLHRN---RVIHRDLKLGNLFLNEDLEVKI 158
Query: 427 GDFGLARFLPPTHVQTSSIGVK---GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIR 483
GDFGLA T V+ K G+ YIAPE S DV+S G +M L++
Sbjct: 159 GDFGLA-----TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
Query: 484 KKPSDIMFEGDMNLHNFARM-----ALPDHVMDIVDS 515
K P FE + R+ ++P H+ + S
Sbjct: 214 KPP----FETSCLKETYLRIKKNEYSIPKHINPVAAS 246
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 88 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 138
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+DE+ V DFG A+ V+ +
Sbjct: 139 LTFEYLHSLDLIYRD---------LKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWX 184
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 185 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 218
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-ASRSFIAECRALRSIRHRNLVKVFTAC 336
+G G++ +VYKG V +K L H A + I E L+ ++H N+V +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
LV+E++ + L+++L D+ N++ N+ + + L
Sbjct: 70 -----HTEKSLTLVFEYL-DKDLKQYL------DDCG------NIINMHNVKLFLFQLLR 111
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP-PTHVQTSSIGVKGSIGYIA 455
L + + H DLKP N+L++E + DFGLAR PT + + ++ Y
Sbjct: 112 GLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV---VTLWYRP 168
Query: 456 PEYGLGS-EVSTNGDVYSYGILMLEL 480
P+ LGS + ST D++ G + E+
Sbjct: 169 PDILLGSTDYSTQIDMWGVGCIFYEM 194
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 307 HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPV 366
H R S E RS+ H+++V ++ NDF +V E + SL E +
Sbjct: 83 HQREKMSM--EISIHRSLAHQHVVGFHGF-----FEDNDFVFVVLELCRRRSLLE----L 131
Query: 367 NREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426
++ + P L+++ + YLH + H DLK N+ L+E++ +
Sbjct: 132 HKRRKALTEPEARYYLRQIVLGCQ------YLHRN---RVIHRDLKLGNLFLNEDLEVKI 182
Query: 427 GDFGLARFLPPTHVQTSSIGVK---GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIR 483
GDFGLA T V+ K G+ YIAPE S DV+S G +M L++
Sbjct: 183 GDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 237
Query: 484 KKPSDIMFEGDMNLHNFARM-----ALPDHVMDIVDS 515
K P FE + R+ ++P H+ + S
Sbjct: 238 KPP----FETSCLKETYLRIKKNEYSIPKHINPVAAS 270
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 34/158 (21%)
Query: 341 YQGNDFKALVYEFMQNGSLEEWLYP--VNREDEVDKAPRNLNLLQRLNIAIDVASALDYL 398
Y+ N F LV++ M+ G L ++L E E K R L ++V AL L
Sbjct: 93 YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL---------LEVICALHKL 143
Query: 399 HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEY 458
+ H DLKP NILLD++M + DFG + L P V G+ Y+APE
Sbjct: 144 N------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE---VCGTPSYLAPEI 194
Query: 459 ----------GLGSEVSTNGDVYSYGILMLELIIRKKP 486
G G EV D++S G++M L+ P
Sbjct: 195 IECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 21/150 (14%)
Query: 335 ACSGVDYQGNDFKALVYEFMQNGSL---EEWLYPVNREDEVDKAPRNLNLLQRLNIAID- 390
C G+ D ++YE+M+N S+ +E+ + + DK +Q + I
Sbjct: 107 TCEGI-ITNYDEVYIIYEYMENDSILKFDEYFFVL------DKNYTCFIPIQVIKCIIKS 159
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS 450
V ++ Y+H+ + H D+KPSNIL+D+ + DFG + ++ ++ G +G+
Sbjct: 160 VLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK----GSRGT 213
Query: 451 IGYIAPEYGLGSEVSTNG---DVYSYGILM 477
++ PE+ +E S NG D++S GI +
Sbjct: 214 YEFMPPEF-FSNESSYNGAKVDIWSLGICL 242
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 21/209 (10%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG GS G V V VK+ +L + E +R +H N+V+++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS-- 110
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y + ++ EF+Q G+L + + V LN Q + V AL Y
Sbjct: 111 ---YLVGEELWVLMEFLQGGALTDIVSQVR-----------LNEEQIATVCEAVLQALAY 156
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
LH H D+K +ILL + + DFG + + + G+ ++APE
Sbjct: 157 LHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXL--VGTPYWMAPE 211
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
S +T D++S GI+++E++ + P
Sbjct: 212 VISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 307 HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPV 366
H R S E RS+ H+++V ++ NDF +V E + SL E +
Sbjct: 81 HQREKMSM--EISIHRSLAHQHVVGFHGF-----FEDNDFVFVVLELCRRRSLLE----L 129
Query: 367 NREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426
++ + P L+++ + YLH + H DLK N+ L+E++ +
Sbjct: 130 HKRRKALTEPEARYYLRQIVLGCQ------YLHRN---RVIHRDLKLGNLFLNEDLEVKI 180
Query: 427 GDFGLARFLPPTHVQTSSIGVK---GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIR 483
GDFGLA T V+ K G+ YIAPE S DV+S G +M L++
Sbjct: 181 GDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 235
Query: 484 KKPSDIMFEGDMNLHNFARM-----ALPDHVMDIVDS 515
K P FE + R+ ++P H+ + S
Sbjct: 236 KPP----FETSCLKETYLRIKKNEYSIPKHINPVAAS 268
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 25/226 (11%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDE-GRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR 327
+ F +L+G G++G V G K+ + + E + L+ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N++ +F ++ + ++ E MQ L+ V + + Q L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLR- 123
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--------PPTH 439
A+ V + +H D LKPSN+L++ V DFGLAR + PT
Sbjct: 124 AVKVLHGSNVIHRD---------LKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 440 VQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRK 484
Q+ + + Y APE L S + S DV+S G ++ EL +R+
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 103/254 (40%), Gaps = 32/254 (12%)
Query: 277 LIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSIRHRNLVKVFT 334
++G GSFG V K + VKV N ++ + + + E L+ + H N++K+F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 335 ACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASA 394
+ F +V E G L + + R E D A I V S
Sbjct: 89 ILED----SSSF-YIVGELYTGGELFDEIIKRKRFSEHDAA----------RIIKQVFSG 133
Query: 395 LDYLHHDCQPITTHCDLKPSNILLDEEMVS---HVGDFGLARFLPPTHVQTSSIGVKGSI 451
+ Y+H + H DLKP NILL+ + + DFGL+ I G+
Sbjct: 134 ITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GTA 187
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMD 511
YIAPE G+ DV+S G+++ L+ P F G R+ + D
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP----FYGKNEYDILKRVETGKYAFD 242
Query: 512 IVD-STLLNDVEDL 524
+ T+ +D +DL
Sbjct: 243 LPQWRTISDDAKDL 256
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 86/215 (40%), Gaps = 26/215 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--RSFIAECRALRSIRHRNLVKVFTA 335
IG G+F V V V++ + +S + E R ++ + H N+VK+F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+ LV E+ G + ++L R E + + + SA+
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ----------IVSAV 126
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLA-RFLPPTHVQTSSIGVKGSIGYI 454
Y H Q H DLK N+LLD +M + DFG + F + T GS Y
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPPYA 179
Query: 455 APEYGLGSEVS-TNGDVYSYGILMLELIIRKKPSD 488
APE G + DV+S G+++ L+ P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 31/274 (11%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
+ F +IG G+FG V + +K+ N R+ A R R +
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-KWEMLKRAETACFREERDVLVNGD 148
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN--LLQRLNI 387
+ TA +Q + LV ++ G L L DK P ++ + + +
Sbjct: 149 CQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFE-----DKLPEDMARFYIGEMVL 202
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
AID L Y+H D +KP N+LLD + DFG + SS+ V
Sbjct: 203 AIDSIHQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 448 KGSIGYIAPEY------GLGSEVSTNGDVYSYGILMLELIIRKKP--SDIMFEGDMNLHN 499
G+ YI+PE G+G + D +S G+ M E++ + P ++ + E + N
Sbjct: 254 -GTPDYISPEILQAMEDGMG-KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 311
Query: 500 F-ARMALPDHVMDIVDSTLLNDVEDLAIISNQRQ 532
R P HV D+ + D+ I S +R+
Sbjct: 312 HEERFQFPSHVTDVSEEA--KDLIQRLICSRERR 343
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 31/274 (11%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
+ F +IG G+FG V + +K+ N R+ A R R +
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-KWEMLKRAETACFREERDVLVNGD 132
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN--LLQRLNI 387
+ TA +Q + LV ++ G L L DK P ++ + + +
Sbjct: 133 CQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFE-----DKLPEDMARFYIGEMVL 186
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
AID L Y+H D +KP N+LLD + DFG + SS+ V
Sbjct: 187 AIDSIHQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 448 KGSIGYIAPEY------GLGSEVSTNGDVYSYGILMLELIIRKKP--SDIMFEGDMNLHN 499
G+ YI+PE G+G + D +S G+ M E++ + P ++ + E + N
Sbjct: 238 -GTPDYISPEILQAMEDGMG-KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
Query: 500 F-ARMALPDHVMDIVDSTLLNDVEDLAIISNQRQ 532
R P HV D+ + D+ I S +R+
Sbjct: 296 HEERFQFPSHVTDVSEEA--KDLIQRLICSRERR 327
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 26/209 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G+FG VYK E KV + ++ E L S H N+VK+ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF- 103
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y N+ L+ EF G+++ + + R P + +Q + AL+Y
Sbjct: 104 ---YYENNLWILI-EFCAGGAVDAVMLELER-------PLTESQIQV--VCKQTLDALNY 150
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPE 457
LH + H DLK NIL + + DFG++ T G+ ++APE
Sbjct: 151 LHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDXFIGTPYWMAPE 205
Query: 458 YGLGSEVSTN------GDVYSYGILMLEL 480
+ E S + DV+S GI ++E+
Sbjct: 206 VVM-CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 66 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 115
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 116 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 168 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 307 HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPV 366
H R S E RS+ H+++V ++ NDF +V E + SL E +
Sbjct: 57 HQREKMSM--EISIHRSLAHQHVVGFHGF-----FEDNDFVFVVLELCRRRSLLE----L 105
Query: 367 NREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426
++ + P L+++ + YLH + H DLK N+ L+E++ +
Sbjct: 106 HKRRKALTEPEARYYLRQIVLGCQ------YLHRN---RVIHRDLKLGNLFLNEDLEVKI 156
Query: 427 GDFGLARFLPPTHVQTSSIGVK---GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIR 483
GDFGLA T V+ K G+ YIAPE S DV+S G +M L++
Sbjct: 157 GDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211
Query: 484 KKPSDIMFEGDMNLHNFARM-----ALPDHVMDIVDS 515
K P FE + R+ ++P H+ + S
Sbjct: 212 KPP----FETSCLKETYLRIKKNEYSIPKHINPVAAS 244
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
IA+ + AL++LH I H D+KPSN+L++ + DFG++ +L +
Sbjct: 113 KIAVSIVKALEHLHSKLSVI--HRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 446 GVKGSIGYIAPEYGLGSEVSTNG-----DVYSYGILMLELIIRKKPSD 488
G K Y+APE + E++ G D++S GI M+EL I + P D
Sbjct: 171 GCK---PYMAPER-INPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 93/226 (41%), Gaps = 43/226 (19%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR------ 325
+ S +G+G++GSV + V +K + SR F +E A R+ R
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIK-------KLSRPFQSEIFAKRAYRELLLLK 96
Query: 326 ---HRN---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNL 379
H N L+ VFT S + DF LV FMQ L++ + E+++
Sbjct: 97 HMQHENVIGLLDVFTPASSLR-NFYDF-YLVMPFMQT-DLQKIMGMEFSEEKIQ------ 147
Query: 380 NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTH 439
+ + L Y+H H DLKP N+ ++E+ + DFGLAR H
Sbjct: 148 ------YLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----H 193
Query: 440 VQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRK 484
G + Y APE L + D++S G +M E++ K
Sbjct: 194 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 26/228 (11%)
Query: 271 GFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFI-AECRALRSIRHRN 328
++ +IG GSFG VY+ L D G KV ++F E + +R + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------GKAFKNRELQIMRKLDHCN 74
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+V++ Y + K VY + + +Y V R +A + L ++
Sbjct: 75 IVRL----RYFFYSSGEKKDEVYLNLVLDYVPATVYRVAR--HYSRAKQTLPVIYVKLYM 128
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHVGDFGLARFLPPTHVQTSSIGV 447
+ +L Y+H H D+KP N+LLD + V + DFG A+ L S I
Sbjct: 129 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI-- 183
Query: 448 KGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
S Y APE G ++ +++ DV+S G ++ EL++ + +F GD
Sbjct: 184 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP----IFPGD 226
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 65 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 114
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 115 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 30/217 (13%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--RSFIAECRALRSIRHRNLVKVFTA 335
IG G+F V V VK+ + +S + E R ++ + H N+VK+F
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWL--YPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
+ LV E+ G + ++L + +E E R + S
Sbjct: 75 I-----ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ------------IVS 117
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLA-RFLPPTHVQTSSIGVKGSIG 452
A+ Y H Q H DLK N+LLD +M + DFG + F + T GS
Sbjct: 118 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPP 170
Query: 453 YIAPEYGLGSEVS-TNGDVYSYGILMLELIIRKKPSD 488
Y APE G + DV+S G+++ L+ P D
Sbjct: 171 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 278 IGTGSFGSVYKGV--LDEGRTTVTVKVFNLHHHRA-SRSFIAECRALRSIRHRNLVKVFT 334
+G G+FGSV +GV + + + V +KV +A + + E + + + + +V++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 335 ACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASA 394
C + LV E G L ++L V + +E+ + LL ++++ +
Sbjct: 404 VCQA------EALMLVMEMAGGGPLHKFL--VGKREEIPVS-NVAELLHQVSMGMKYLEE 454
Query: 395 LDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSIG 452
+++H + L N+LL + + DFGL++ L ++ S G K +
Sbjct: 455 KNFVHRN---------LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPLK 504
Query: 453 YIAPEYGLGSEVSTNGDVYSYGILMLE-LIIRKKPSDIM 490
+ APE + S+ DV+SYG+ M E L +KP M
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 122 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 172
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ ++
Sbjct: 173 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGATWT 218
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFNLHHHRASRSFI-AECRALRSIR 325
D F +G+G+FG V+ L E R++ +K N + I AE L+S+
Sbjct: 22 DLFIFKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD 78
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H N++K+F DY +V E + G L E + + L++++
Sbjct: 79 HPNIIKIFEVFE--DYHN---MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH----VGDFGLARFLPPTHVQ 441
+AL Y H H DLKP NIL ++ H + DFGLA
Sbjct: 134 ------MNALAYFHSQH---VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKS---D 180
Query: 442 TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
S G+ Y+APE +V+ D++S G++M L+
Sbjct: 181 EHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLL 219
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 103/254 (40%), Gaps = 32/254 (12%)
Query: 277 LIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSIRHRNLVKVFT 334
++G GSFG V K + VKV N ++ + + + E L+ + H N++K+F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 335 ACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASA 394
+ F +V E G L + + R E D A I V S
Sbjct: 89 ILE----DSSSF-YIVGELYTGGELFDEIIKRKRFSEHDAA----------RIIKQVFSG 133
Query: 395 LDYLHHDCQPITTHCDLKPSNILLDEEMVS---HVGDFGLARFLPPTHVQTSSIGVKGSI 451
+ Y+H + H DLKP NILL+ + + DFGL+ I G+
Sbjct: 134 ITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GTA 187
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMD 511
YIAPE G+ DV+S G+++ L+ P F G R+ + D
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP----FYGKNEYDILKRVETGKYAFD 242
Query: 512 IVD-STLLNDVEDL 524
+ T+ +D +DL
Sbjct: 243 LPQWRTISDDAKDL 256
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 93/226 (41%), Gaps = 43/226 (19%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR------ 325
+ S +G+G++GSV + V +K + SR F +E A R+ R
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIK-------KLSRPFQSEIFAKRAYRELLLLK 78
Query: 326 ---HRN---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNL 379
H N L+ VFT S + DF LV FMQ L++ + E+++
Sbjct: 79 HMQHENVIGLLDVFTPASSLR-NFYDF-YLVMPFMQT-DLQKIMGLKFSEEKIQ------ 129
Query: 380 NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTH 439
+ + L Y+H H DLKP N+ ++E+ + DFGLAR H
Sbjct: 130 ------YLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----H 175
Query: 440 VQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRK 484
G + Y APE L + D++S G +M E++ K
Sbjct: 176 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 371 EVDKAPRNL-----NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425
E ++AP +L L + + VA +++L H DL NILL E+ V
Sbjct: 175 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 231
Query: 426 VGDFGLAR--FLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-I 482
+ DFGLAR + P +V+ + + ++APE + DV+S+G+L+ E+ +
Sbjct: 232 ICDFGLARDIYKDPDYVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 289
Query: 483 RKKPS---DIMFEGDMNLHNFARMALPDHVMDIVDSTLLN 519
P I E L RM PD+ + T+L+
Sbjct: 290 GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 329
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F IGTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E++ G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIKVADFGFAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 65 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 114
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 115 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 371 EVDKAPRNL-----NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425
E ++AP +L L + + VA +++L H DL NILL E+ V
Sbjct: 177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 233
Query: 426 VGDFGLAR--FLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-I 482
+ DFGLAR + P +V+ + + ++APE + DV+S+G+L+ E+ +
Sbjct: 234 ICDFGLARDIYKDPDYVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 291
Query: 483 RKKPS---DIMFEGDMNLHNFARMALPDHVMDIVDSTLLN 519
P I E L RM PD+ + T+L+
Sbjct: 292 GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 331
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 103/254 (40%), Gaps = 32/254 (12%)
Query: 277 LIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSIRHRNLVKVFT 334
++G GSFG V K + VKV N ++ + + + E L+ + H N++K+F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 335 ACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASA 394
+ F +V E G L + + R E D A I V S
Sbjct: 89 ILE----DSSSF-YIVGELYTGGELFDEIIKRKRFSEHDAA----------RIIKQVFSG 133
Query: 395 LDYLHHDCQPITTHCDLKPSNILLDEEMVS---HVGDFGLARFLPPTHVQTSSIGVKGSI 451
+ Y+H + H DLKP NILL+ + + DFGL+ I G+
Sbjct: 134 ITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GTA 187
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMD 511
YIAPE G+ DV+S G+++ L+ P F G R+ + D
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP----FYGKNEYDILKRVETGKYAFD 242
Query: 512 IVD-STLLNDVEDL 524
+ T+ +D +DL
Sbjct: 243 LPQWRTISDDAKDL 256
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 30/217 (13%)
Query: 278 IGTGSFGSVY--KGVLDEGRTTVTVKVFNLHHHRAS--RSFIAECRALRSIRHRNLVKVF 333
IG G+F V + VL GR V VK+ + + + E R ++ + H N+VK+F
Sbjct: 23 IGKGNFAKVKLARHVL-TGRE-VAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
+ LV E+ G + ++L R E + + ++ S
Sbjct: 81 EVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----------S 125
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLA-RFLPPTHVQTSSIGVKGSIG 452
A+ Y H Q H DLK N+LLD +M + DFG + F + T GS
Sbjct: 126 AVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC----GSPP 178
Query: 453 YIAPEYGLGSEVS-TNGDVYSYGILMLELIIRKKPSD 488
Y APE G + DV+S G+++ L+ P D
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 65 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 114
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 115 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 65 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 114
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 115 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 86/219 (39%), Gaps = 34/219 (15%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--RSFIAECRALRSIRHRNLVKVFTA 335
IG G+F V V V++ + +S + E R ++ + H N+VK+F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+ LV E+ G + ++L R E + + + SA+
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ----------IVSAV 126
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK-----GS 450
Y H Q H DLK N+LLD +M + DFG + + G K GS
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLDEFCGS 175
Query: 451 IGYIAPEYGLGSEVS-TNGDVYSYGILMLELIIRKKPSD 488
Y APE G + DV+S G+++ L+ P D
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKXVNHKN 84
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLXQVI-----QMELDHERMSYLLYQML 136
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 137 -------XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV 186
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 187 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 227
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 36/214 (16%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFT 334
IG+G+ G + Y +L+ V +K + SR F + A R+ R L+KV
Sbjct: 32 IGSGAQGIVVAAYDAILERN---VAIK-------KLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 335 ACSGVDYQGNDFKALVYEFMQNGSLEEW--LYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
+ + L+ F SLEE+ +Y V ++ NL+ + ++ + +
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEFQDVYIV-----MELMDANLSQVIQMELDHERM 128
Query: 393 SALDY-----LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
S L Y + H H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVT 188
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ Y APE LG N D++S G++M E+I
Sbjct: 189 R---YYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 86/219 (39%), Gaps = 34/219 (15%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--RSFIAECRALRSIRHRNLVKVFTA 335
IG G+F V V VK+ + +S + E R ++ + H N+VK+F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+ LV E+ G + ++L R E + + + SA+
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ----------IVSAV 126
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK-----GS 450
Y H Q H DLK N+LLD +M + DFG + + G K G+
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLDAFCGA 175
Query: 451 IGYIAPEYGLGSEVS-TNGDVYSYGILMLELIIRKKPSD 488
Y APE G + DV+S G+++ L+ P D
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 82/211 (38%), Gaps = 22/211 (10%)
Query: 273 SSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKV 332
S ++G G FG V+K + K+ + E + + H NL+++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
+ A ++ + LV E++ G L D + NL L + +
Sbjct: 152 YDA-----FESKNDIVLVMEYVDGGELF---------DRIIDESYNLTELDTILFMKQIC 197
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG--DFGLARFLPPTHVQTSSIGVKGS 450
+ ++H Q H DLKP NIL + DFGLAR P + G+
Sbjct: 198 EGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GT 251
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
++APE VS D++S G++ L+
Sbjct: 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL 282
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 152
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 153 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 198
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 84
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLXQVI-----QMELDHERMSYLLYQML 136
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 137 -------XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV 186
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 187 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 227
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 65 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 114
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 115 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 371 EVDKAPRNL-----NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425
E ++AP +L L + + VA +++L H DL NILL E+ V
Sbjct: 182 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 238
Query: 426 VGDFGLAR--FLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-I 482
+ DFGLAR + P +V+ + + ++APE + DV+S+G+L+ E+ +
Sbjct: 239 ICDFGLARDIYKDPDYVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 296
Query: 483 RKKPS---DIMFEGDMNLHNFARMALPDHVMDIVDSTLLN 519
P I E L RM PD+ + T+L+
Sbjct: 297 GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 336
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 560 LDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGR-LRRLQVPDLNNNSIGGE 618
LDL+S KL+ L+ L++L L +N +P+ I + L+ L+ + +N +
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTDNKLQA- 99
Query: 619 IPVNL-SSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSL 677
+P+ + NL + L +NQL P F SL+K+ LSLG+N L L+SL
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSL 159
Query: 678 RKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGEN 733
+++ L N L KL L L L N+L + + ++ + + EN
Sbjct: 160 KELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Query: 623 LSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISL 682
+ SC+N ++ + IPS+ + +K L L N L L+ LR + L
Sbjct: 11 VCSCNNNKNSVDCSSKKLTAIPSNIPADTK--KLDLQSNKLSSLPSKAFHRLTKLRLLYL 68
Query: 683 AINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFN-ISSIAEFDVGENKIQGNIPL 741
N L +LKNL L++ N+L + P +F+ + ++AE + N+++ ++P
Sbjct: 69 NDNKLQTLPAGIFKELKNLETLWVTDNKLQAL-PIGVFDQLVNLAELRLDRNQLK-SLPP 126
Query: 742 DYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKL 784
+L L Y S+G N + + L+ + NN+L
Sbjct: 127 RVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL 169
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 36 SIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQFRGSFPTEV-GNLIN 94
+IPS++ + L +N LS LT L L L+ N+ + + P + L N
Sbjct: 30 AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKN 86
Query: 95 LETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLK 154
LETL V+ N LQ + + + + N+ + L L RN+L P L
Sbjct: 87 LETLWVTDNKLQA---------LPIGVFDQLVNLAE----LRLDRNQLKSLPPRVFDSLT 133
Query: 155 VIENLNLSYNDLEGMVPTEGVFKNASAISVLG--NNKL 190
+ L+L YN+L+ + +GVF +++ L NN+L
Sbjct: 134 KLTYLSLGYNELQSL--PKGVFDKLTSLKELRLYNNQL 169
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 25/189 (13%)
Query: 2 LALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSL-GLCESLTTIGLFNNNLSGT 60
L L SN+LS + L KL Y++DN L+ ++P+ + ++L T+ + +N L
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQAL 100
Query: 61 IPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLE 120
L +L L L RNQ + P +L L L++ N LQ
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS------------- 147
Query: 121 ILEMQGNVFQGLTILD---LSRNKLSGEIPE-FLVGLKVIENLNLSYNDLEGMVPTEGVF 176
+ VF LT L L N+L +PE L ++ L L N L+ VP EG F
Sbjct: 148 ---LPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLK-RVP-EGAF 201
Query: 177 KNASAISVL 185
+ + +L
Sbjct: 202 DSLEKLKML 210
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 42/107 (39%)
Query: 23 LVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQFR 82
L E + N LK P LT + L N L LTSL L L NQ +
Sbjct: 111 LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK 170
Query: 83 GSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVF 129
L L+TL + N L+ S KL++L++Q N +
Sbjct: 171 RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPW 217
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 36/214 (16%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFT 334
IG+G+ G + Y +L+ V +K + SR F + A R+ R L+KV
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIK-------KLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 335 ACSGVDYQGNDFKALVYEFMQNGSLEEW--LYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
+ + L+ F SLEE+ +Y V ++ NL+ + ++ + +
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEFQDVYIV-----MELMDANLSQVIQMELDHERM 128
Query: 393 SALDY-----LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
S L Y + H H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVT 188
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ Y APE LG N D++S G++M E+I
Sbjct: 189 R---YYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELL 217
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 371 EVDKAPRNL-----NLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425
E ++AP +L L + + VA +++L H DL NILL E+ V
Sbjct: 184 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 240
Query: 426 VGDFGLAR--FLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI-I 482
+ DFGLAR + P +V+ + + ++APE + DV+S+G+L+ E+ +
Sbjct: 241 ICDFGLARDIYKDPDYVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 298
Query: 483 RKKPS---DIMFEGDMNLHNFARMALPDHVMDIVDSTLLN 519
P I E L RM PD+ + T+L+
Sbjct: 299 GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 338
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 77
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 78 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLXQVI-----QMELDHERMSYLLYQML 129
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 130 -------XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV 179
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 180 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 220
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 122 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE----PHARFYAAQIV 172
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 173 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 218
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 276 NLIGTGSFGSVYKGVLDEGR---TTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
++G G FG VY+GV + V VK ++ F++E ++++ H ++VK
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ G+ + + ++ E G L +L ++ +L +L + ++ +
Sbjct: 90 LI----GIIEEEPTW--IIMELYPYGELGHYL---------ERNKNSLKVLTLVLYSLQI 134
Query: 392 ASALDYLHH-DCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS 450
A+ YL +C H D+ NIL+ +GDFGL+R++ +S+ +
Sbjct: 135 CKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLP 189
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I +++PE +T DV+ + + M E++
Sbjct: 190 IKWMSPESINFRRFTTASDVWMFAVCMWEIL 220
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKXVNHKN 84
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLXQVI-----QMELDHERMSYLLYQML 136
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 137 -------CGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV 186
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 187 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
IG+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 90
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 91 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 130
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 131 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDD 182
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 25/226 (11%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDE-GRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR 327
+ F +L+G G++G V G K+ + + E + L+ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N++ +F ++ + ++ E MQ L+ V + + Q L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLR- 123
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--------PPTH 439
A+ V + +H D LKPSN+L++ V DFGLAR + PT
Sbjct: 124 AVKVLHGSNVIHRD---------LKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 440 VQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRK 484
Q+ + Y APE L S + S DV+S G ++ EL +R+
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 96 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE----PHARFYAAQIV 146
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 147 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 192
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 193 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 226
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 66 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 115
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 116 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 645 SDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPF-TLSKLKNLVI 703
+ F L+K+ L+L +N L +L+ L + LA N LA S+P L L
Sbjct: 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDK 111
Query: 704 LYLGVNRLSGIVPSSIFN-ISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITG 762
LYLG N+L + PS +F+ ++ + E + N++Q +IP L NLQ S+ TN++
Sbjct: 112 LYLGGNQLKSL-PSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQS 169
Query: 763 AIPPSISNASKLEVFQALNNKL 784
+ KL+ N+
Sbjct: 170 VPHGAFDRLGKLQTITLFGNQF 191
Score = 37.0 bits (84), Expect = 0.047, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 627 SNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINN 686
+ L +GLA NQL F L++++ L LG N L L+ L+++ L N
Sbjct: 83 TELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQ 142
Query: 687 LAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFN 721
L KL NL L L N+L VP F+
Sbjct: 143 LQSIPAGAFDKLTNLQTLSLSTNQLQS-VPHGAFD 176
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 2 LALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIG---LFNNNLS 58
L LD N+L +L +L +++N L S+P LG+ + LT + L N L
Sbjct: 64 LNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLP--LGVFDHLTQLDKLYLGGNQLK 120
Query: 59 GTIPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIK 118
LT L L L+ NQ + L NL+TL++S N LQ K
Sbjct: 121 SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGK 180
Query: 119 LEILEMQGNVF 129
L+ + + GN F
Sbjct: 181 LQTITLFGNQF 191
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 20/213 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTAC 336
+G G++G V V V VK+ ++ + E + + H N+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
G +GN + L E+ G L + + P E D A R + L + +
Sbjct: 72 -GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---------AGVV 119
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
YLH TH D+KP N+LLDE + DFGLA + + + G++ Y+AP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 457 EYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
E E DV+S GI++ ++ + P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 20/213 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTAC 336
+G G++G V V V VK+ ++ + E + + H N+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
G +GN + L E+ G L + + P E D A R + L + +
Sbjct: 72 -GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---------AGVV 119
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
YLH TH D+KP N+LLDE + DFGLA + + + G++ Y+AP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 457 EYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
E E DV+S GI++ ++ + P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 20/213 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTAC 336
+G G++G V V V VK+ ++ + E + + H N+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
G +GN + L E+ G L + + P E D A R + L + +
Sbjct: 72 -GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---------AGVV 119
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
YLH TH D+KP N+LLDE + DFGLA + + + G++ Y+AP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 457 EYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
E E DV+S GI++ ++ + P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 25/226 (11%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDE-GRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR 327
+ F +L+G G++G V G K+ + + E + L+ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N++ +F ++ + ++ E MQ L+ V + + Q L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLR- 123
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--------PPTH 439
A+ V + +H D LKPSN+L++ V DFGLAR + PT
Sbjct: 124 AVKVLHGSNVIHRD---------LKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 440 VQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRK 484
Q+ + Y APE L S + S DV+S G ++ EL +R+
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 65 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 114
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 115 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 65 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 114
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 115 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 65 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 114
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 115 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 276 NLIGTGSFGSVYKGVLDEGR---TTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
++G G FG VY+GV + V VK ++ F++E ++++ H ++VK
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391
+ G+ + + ++ E G L +L ++ +L +L + ++ +
Sbjct: 78 LI----GIIEEEPTW--IIMELYPYGELGHYL---------ERNKNSLKVLTLVLYSLQI 122
Query: 392 ASALDYLHH-DCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGS 450
A+ YL +C H D+ NIL+ +GDFGL+R++ +S+ +
Sbjct: 123 CKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLP 177
Query: 451 IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I +++PE +T DV+ + + M E++
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEIL 208
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
TD + IG G+F V + V K+ N R + E R R ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+V++ + S F LV++ + G L E + E D + + +Q++
Sbjct: 63 SNIVRLHDSISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADAS----HCIQQI- 112
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM---VSHVGDFGLARFLPPTHVQTS 443
L+ + H Q H DLKP N+LL + + DFGLA + Q +
Sbjct: 113 --------LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQA 162
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G G+ GY++PE D+++ G+++ L++ P
Sbjct: 163 WFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 77
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E++ G + L + R E P
Sbjct: 78 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PH 128
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 129 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK---- 175
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 176 -RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 217
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 31/214 (14%)
Query: 276 NLIGTGSFGSVYKGVLDEGR---TTVTVKVFNLHHHRASRS-FIAECRALRSIRHRNLVK 331
++G G FG VY+GV + V VK ++ F++E ++++ H ++VK
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI---A 388
+ G+ + + ++ E G L +L RN N L+ L + +
Sbjct: 74 LI----GIIEEEPTW--IIMELYPYGELGHYL------------ERNKNSLKVLTLVLYS 115
Query: 389 IDVASALDYLHH-DCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + A+ YL +C H D+ NIL+ +GDFGL+R++ +S+
Sbjct: 116 LQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-T 170
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ I +++PE +T DV+ + + M E++
Sbjct: 171 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEIL 204
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 94 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PHARFYAAQIV 144
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 145 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 190
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 647 FGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPF-TLSKLKNLVILY 705
F L+K+ L+L +N L +L+ L + LA N LA S+P L L LY
Sbjct: 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLY 113
Query: 706 LGVNRLSGIVPSSIFN-ISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAI 764
LG N+L + PS +F+ ++ + E + N++Q +IP L NLQ S+ TN++
Sbjct: 114 LGGNQLKSL-PSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVP 171
Query: 765 PPSISNASKLEVFQALNNKL 784
+ KL+ N+
Sbjct: 172 HGAFDRLGKLQTITLFGNQF 191
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 627 SNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINN 686
+ L +GLA NQL F L++++ L LG N L L+ L+++ L N
Sbjct: 83 TELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQ 142
Query: 687 LAGSIPF-TLSKLKNLVILYLGVNRLSGIVPSSIFN 721
L SIP KL NL L L N+L VP F+
Sbjct: 143 LQ-SIPAGAFDKLTNLQTLSLSTNQLQS-VPHGAFD 176
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 20/213 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTAC 336
+G G++G V V V VK+ ++ + E + + H N+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
G +GN + L E+ G L + + P E D A R + L + +
Sbjct: 72 -GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---------AGVV 119
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
YLH TH D+KP N+LLDE + DFGLA + + + G++ Y+AP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 457 EYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
E E DV+S GI++ ++ + P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 64 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 113
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 114 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 165
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 166 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 65 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 114
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 115 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKXQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 66 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 115
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 116 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 20/213 (9%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTAC 336
+G G++G V V V VK+ ++ + E + + H N+VK +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
G +GN + L E+ G L + + P E D A R + L + +
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---------AGVV 118
Query: 397 YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456
YLH TH D+KP N+LLDE + DFGLA + + + G++ Y+AP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 457 EYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
E E DV+S GI++ ++ + P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G++G V V V VK+ ++ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 65 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 114
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 115 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 90
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 91 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 130
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 131 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDD 182
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PHARFYAAQIV 152
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 153 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 198
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 122 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PHARFYAAQIV 172
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 173 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 218
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 26/209 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G+FG VYK E KV +I E L + H +VK+ A
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA-- 76
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y + ++ EF G+++ + ++ R L Q + + AL++
Sbjct: 77 ---YYHDGKLWIMIEFCPGGAVDAIMLELD---------RGLTEPQIQVVCRQMLEALNF 124
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGL-ARFLPPTHVQTSSIGVKGSIGYIAP 456
LH H DLK N+L+ E + DFG+ A+ L + S I G+ ++AP
Sbjct: 125 LH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAP 178
Query: 457 EYGL-----GSEVSTNGDVYSYGILMLEL 480
E + + D++S GI ++E+
Sbjct: 179 EVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 81
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
L+ VFT ++ + ND + + L + + V A + +Q L
Sbjct: 82 LLDVFTPARSLE-EFNDVYLVTH-----------LMGADLNNIVKCAKLTDDHVQFL--I 127
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
+ L Y+H H DLKPSN+ ++E+ + DFGLAR H G
Sbjct: 128 YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYV 179
Query: 449 GSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
+ Y APE L + D++S G +M EL+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 96/253 (37%), Gaps = 27/253 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
+ F +IG G+FG V L +K+ N R+ A R R +
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN-KWEMLKRAETACFREERDVLVNGD 132
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN--LLQRLNI 387
K T +Q ++ LV ++ G L L D+ P + L + I
Sbjct: 133 SKWITTLHYA-FQDDNNLYLVMDYYVGGDLLTLLSKFE-----DRLPEEMARFYLAEMVI 186
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
AID L Y+H D +KP NIL+D + DFG L SS+ V
Sbjct: 187 AIDSVHQLHYVHRD---------IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV 237
Query: 448 KGSIGYIAPEY-----GLGSEVSTNGDVYSYGILMLELIIRKKP--SDIMFEGDMNLHNF 500
G+ YI+PE G D +S G+ M E++ + P ++ + E + N
Sbjct: 238 -GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 501 A-RMALPDHVMDI 512
R P V D+
Sbjct: 297 KERFQFPTQVTDV 309
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PHARFYAAQIV 152
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 153 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 198
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 92
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E++ G + L + R E P
Sbjct: 93 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PH 143
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK---- 190
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 191 -RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PHARFYAAQIV 152
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 153 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 198
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E++ G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 94 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE----PHARFYAAQIV 144
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 145 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 190
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 92
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E++ G + L + R E P
Sbjct: 93 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PH 143
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK---- 190
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 191 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 96
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 97 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 136
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 137 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDD 188
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 189 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + + T + + Y APE LG N
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 468 GDVYSYGILMLELIIRKKPSDIMFEG 493
D++S G +M E++ K I+F G
Sbjct: 206 VDIWSVGCIMGEMVRHK----ILFPG 227
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E++ G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 82
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 83 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 122
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 123 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 174
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 175 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 214
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 85
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 86 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLCQVI-----QMELDHERMSYLLYQML 137
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 138 -------CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 187
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 188 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 228
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKXQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 34/263 (12%)
Query: 520 DVEDLAIISNQRQRQIRVNNIIEC-----LISMLRIGSKAQKVTILD-------LESLKL 567
D++ L ++N + ++ N I + L S+ ++ + +VT L LE L +
Sbjct: 121 DIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDI 180
Query: 568 AGSILPHIGNLSFLKILNLE-----NNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVN 622
+ + + I L+ K+ NLE NN + P +G L L LN N + +I
Sbjct: 181 SSNKVSDISVLA--KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK-DIGT- 234
Query: 623 LSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISL 682
L+S +NL + LA NQ+ P L+K+ L LG N I +I PL L++L + L
Sbjct: 235 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ-ISNI-SPLAGLTALTNLEL 290
Query: 683 AINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLD 742
N L P +S LKNL L L N +S I P S +++ + NK+ L
Sbjct: 291 NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFSNNKVSDVSSL- 345
Query: 743 YGFTLQNLQYFSIGTNRITGAIP 765
L N+ + S G N+I+ P
Sbjct: 346 --ANLTNINWLSAGHNQISDLTP 366
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 65 LMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEM 124
L LT+L +L + NQ P +G L NL+ L+++GN L+ TL S L L++
Sbjct: 191 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDL 246
Query: 125 QGNVFQG---------LTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGV 175
N LT L L N++S P L GL + NL L+ N LE + P
Sbjct: 247 ANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISN- 303
Query: 176 FKNASAISVLGNN 188
KN + +++ NN
Sbjct: 304 LKNLTYLTLYFNN 316
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 4 LDSNRLSGNIPPSIG---NLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGT 60
LD L+GN IG +L L + +++N + P S GL + LT + L N +S
Sbjct: 219 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLS-GLTK-LTELKLGANQISNI 276
Query: 61 IPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLE 120
P L GLT+L L+L+ NQ P + NL NL LT+ N + P + S KL+
Sbjct: 277 SP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 330
Query: 121 ILEMQGN 127
L N
Sbjct: 331 RLFFSNN 337
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 122
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 123 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLCQVI-----QMELDHERMSYLLYQML 174
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 175 -------CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 224
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 225 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 265
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 87
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 88 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 127
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 128 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 179
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 92
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 93 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 132
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 133 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 184
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR--ASRSFIAECRALRSIRHRNLVKVFTA 335
IG G++G+V+K E V +K L S + E L+ ++H+N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH-- 67
Query: 336 CSGVDYQGNDFK-ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASA 394
D +D K LV+EF + L+++ N ++D L Q L + +
Sbjct: 68 ----DVLHSDKKLTLVFEFC-DQDLKKYFDSCN--GDLDPEIVKSFLFQLLK-GLGFCHS 119
Query: 395 LDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSIGVKGSIGY 453
+ LH D LKP N+L++ + DFGLAR F P ++ + ++ Y
Sbjct: 120 RNVLHRD---------LKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV---VTLWY 167
Query: 454 IAPEYGLGSEV-STNGDVYSYGILMLELIIRKKP 486
P+ G+++ ST+ D++S G + EL +P
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 90
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 91 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 130
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 131 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 182
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 78
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 79 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLCQVI-----QMELDHERMSYLLYQML 130
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 131 -------CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 180
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 181 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 96
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 97 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 136
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 137 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 188
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 189 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 85
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 86 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLCQVI-----QMELDHERMSYLLYQML 137
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 138 -------CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 187
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 188 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 228
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E++ G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR----ELRLLKHMKHENVIG 97
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 98 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 137
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 138 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 189
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 81
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 82 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 121
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 122 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 173
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E++ G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 82
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 83 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 122
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 123 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 174
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 175 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 214
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 84
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 137 -------CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 186
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 187 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 227
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 26/209 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G G+FG VYK E KV +I E L + H +VK+ A
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA-- 84
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y + ++ EF G+++ + ++ R L Q + + AL++
Sbjct: 85 ---YYHDGKLWIMIEFCPGGAVDAIMLELD---------RGLTEPQIQVVCRQMLEALNF 132
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGL-ARFLPPTHVQTSSIGVKGSIGYIAP 456
LH H DLK N+L+ E + DFG+ A+ L + S I G+ ++AP
Sbjct: 133 LH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAP 186
Query: 457 EYGL-----GSEVSTNGDVYSYGILMLEL 480
E + + D++S GI ++E+
Sbjct: 187 EVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 90
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 91 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 130
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 131 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 182
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 97
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 98 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 137
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 138 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 189
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 84
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 85 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 124
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 125 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 176
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 177 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 108
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 109 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 148
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 149 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 200
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 201 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 109/261 (41%), Gaps = 38/261 (14%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFNLHHHRASRSFIA-ECRALRSIRHR 327
F +GTG+F V VL E + T VK + S I E LR I+H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+V A + Y+ + LV + + G L + + E D + L+++
Sbjct: 81 NIV----ALEDI-YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS----TLIRQ--- 128
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVSHVGDFGLARFLPPTHVQTSS 444
V A+ YLH + H DLKP N+L DEE + DFGL++ V +++
Sbjct: 129 ---VLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA 182
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
G + GY+APE S D +S G++ L+ P E D L F ++
Sbjct: 183 CG---TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP--FYDENDSKL--FEQIL 235
Query: 505 LPDHVMDIVDSTLLNDVEDLA 525
++ DS +D+ D A
Sbjct: 236 KAEYEF---DSPYWDDISDSA 253
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 97
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 98 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 137
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 138 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 189
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 83
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 84 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 123
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 124 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 175
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 215
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 122
Query: 329 LVK---VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
++ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 123 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLCQVI-----QMELDHERMSYLLYQML 174
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 175 -------CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 224
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 225 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 265
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRS-IRHR 327
+ + +G G++G V V V VK+ ++ I + + + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 66 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 115
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 116 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 83
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 84 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLCQVI-----QMELDHERMSYLLYQML 135
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 136 -------CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 185
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 186 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 226
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 77
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 78 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLCQVI-----QMELDHERMSYLLYQML 129
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 130 -------CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 179
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 180 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 84
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 137 -------CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 186
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 187 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 227
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ ++
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQM 231
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 395 LDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSIG 452
L Y+H Q I H DLKPSN+L++E +GDFG+AR L P Q +
Sbjct: 171 LKYMH-SAQVI--HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 453 YIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN 499
Y APE L E + D++S G + E++ R++ +F G +H
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ----LFPGKNYVHQ 271
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 95
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 96 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 135
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 136 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 187
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 188 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 227
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 44/228 (19%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN 328
IG+G+ G + Y VLD V +K + H RA R + ++ + H+N
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 78
Query: 329 ---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
L+ VFT ++ + + LV E M + +L + + + E+D + L Q L
Sbjct: 79 IISLLNVFTPQKTLEEFQDVY--LVMELM-DANLCQVI-----QMELDHERMSYLLYQML 130
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ +LH H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 131 -------CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 180
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493
+ Y APE LG N D++S G +M E++ K I+F G
Sbjct: 181 VTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPG 221
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 87
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 88 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 127
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 128 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 179
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 92
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 93 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 132
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 133 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTAD 184
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 81
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 82 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 121
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 122 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 173
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 108
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 109 LLDVFTPARSLE-EFNDVYLVTH--LMGADL-----------------NNIVKCQKLTDD 148
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 149 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 200
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 201 EMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 87
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 88 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 127
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 128 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 179
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR---- 327
+ +IG GSFG V K + V +K+ + R R E R L +R +
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 328 --NLVKVFTACSGVDYQGNDFKAL---VYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
N++ + + ++ F+ L +YE ++ + + P+ R+
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK------------- 204
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS--HVGDFGLARFLPPTHV 440
A + LD LH + HCDLKP NILL ++ S V DFG + +
Sbjct: 205 ----FAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EH 253
Query: 441 QTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
Q ++ Y APE LG+ D++S G ++ EL+
Sbjct: 254 QRVYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELL 293
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR---- 327
+ +IG GSFG V K + V +K+ + R R E R L +R +
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 328 --NLVKVFTACSGVDYQGNDFKAL---VYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
N++ + + ++ F+ L +YE ++ + + P+ R+
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK------------- 204
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS--HVGDFGLARFLPPTHV 440
A + LD LH + HCDLKP NILL ++ S V DFG + +
Sbjct: 205 ----FAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EH 253
Query: 441 QTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
Q ++ Y APE LG+ D++S G ++ EL+
Sbjct: 254 QRVYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELL 293
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 92
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E++ G + L + R E P
Sbjct: 93 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE----PH 143
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK---- 190
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 191 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKEIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E+ G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+++D++ V DFGLA+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLMIDQQGYIQVTDFGLAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 91
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 92 LLDVFTPARSLE-EFNDVYLVTH--LMGADL-----------------NNIVKCQKLTDD 131
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 132 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 183
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 30/217 (13%)
Query: 278 IGTGSFGSVY--KGVLDEGRTTVTVKVFNLHHHRAS--RSFIAECRALRSIRHRNLVKVF 333
IG G+F V + +L GR V +K+ + + + E R ++ + H N+VK+F
Sbjct: 20 IGKGNFAKVKLARHILT-GRE-VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
+ L+ E+ G + ++L R E + + + S
Sbjct: 78 EVI-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ----------IVS 122
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLA-RFLPPTHVQTSSIGVKGSIG 452
A+ Y H Q H DLK N+LLD +M + DFG + F + T GS
Sbjct: 123 AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC----GSPP 175
Query: 453 YIAPEYGLGSEVS-TNGDVYSYGILMLELIIRKKPSD 488
Y APE G + DV+S G+++ L+ P D
Sbjct: 176 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 92
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 93 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 132
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 133 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTAD 184
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E++ G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 87
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 88 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 127
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 128 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDD 179
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 108/268 (40%), Gaps = 53/268 (19%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV R V VK + +H R R E R L+ ++H N
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENVIG 91
Query: 329 LVKVFTACSGVDYQGNDFKA--LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
L+ VFT + ++ DF LV M L + DE ++ L
Sbjct: 92 LLDVFTPATSIE----DFSEVYLVTTLM-GADLNNIVKSQALSDE------HVQFL---- 136
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ L Y+H H DLKPSN+ ++E+ + DFGLAR G
Sbjct: 137 -VYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTG 187
Query: 447 VKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505
+ Y APE L + D++S G +M EL+ K +F G + R
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA----LFPGSDYIDQLKR--- 240
Query: 506 PDHVMDIVDSTLLNDVEDLAIISNQRQR 533
+M++V + E LA IS++ R
Sbjct: 241 ---IMEVVGTP---SPEVLAKISSEHAR 262
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 92
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 93 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 132
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 133 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTAD 184
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E++ G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+L+D++ V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + + T + + Y APE LG N
Sbjct: 154 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 210
Query: 468 GDVYSYGILMLELIIRKKPSDIMFEG 493
D++S G +M E++ K I+F G
Sbjct: 211 VDLWSVGCIMGEMVCHK----ILFPG 232
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 81
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 82 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 121
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 122 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 173
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 174 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 105
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 106 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 145
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 146 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 197
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 198 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + + T + + Y APE LG N
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 199
Query: 468 GDVYSYGILMLELIIRKKPSDIMFEG 493
D++S G +M E++ K I+F G
Sbjct: 200 VDLWSVGCIMGEMVCHK----ILFPG 221
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 105
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 106 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 145
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 146 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 197
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 198 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 275 ANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFT 334
LIG G FG VY G G + + + ++F E A R RH N+V
Sbjct: 38 GELIGKGRFGQVYHGRW-HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 335 ACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASA 394
AC + A++ + + LY V R+ ++ L++ + IA ++
Sbjct: 97 ACMSPPHL-----AIITSLCKGRT----LYSVVRDAKI-----VLDVNKTRQIAQEIVKG 142
Query: 395 LDYLHHDCQPITTHCDLKPSNILLD--EEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIG 452
+ YLH H DLK N+ D + +++ G F ++ L + G +
Sbjct: 143 MGYLHAKG---ILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLC 199
Query: 453 YIAPE--YGLGSEV-------STNGDVYSYGILMLELIIRKKP 486
++APE L + S + DV++ G + EL R+ P
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 395 LDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSIG 452
L Y+H Q I H DLKPSN+L++E +GDFG+AR L P Q +
Sbjct: 172 LKYMH-SAQVI--HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 453 YIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNF 500
Y APE L E + D++S G + E++ R++ +F G +H
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ----LFPGKNYVHQL 273
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 95/242 (39%), Gaps = 33/242 (13%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
FS +IG G FG VY R T K++ + R + + L ++ R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGC-----RKADTGKMYAMKCLDKKRIKMKQGETL-ALNERIMLS 244
Query: 332 V-------FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
+ F C + D + + + M G L Y +++ +A
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEADMRF----- 296
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
A ++ L+++H+ + DLKP+NILLDE + D GLA S
Sbjct: 297 --YAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 351
Query: 445 IGVKGSIGYIAPEY-GLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
G+ GY+APE G ++ D +S G ++ +L+ P + H RM
Sbjct: 352 ----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP--FRQHKTKDKHEIDRM 405
Query: 504 AL 505
L
Sbjct: 406 TL 407
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 95/242 (39%), Gaps = 33/242 (13%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
FS +IG G FG VY R T K++ + R + + L ++ R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGC-----RKADTGKMYAMKCLDKKRIKMKQGETL-ALNERIMLS 244
Query: 332 V-------FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
+ F C + D + + + M G L Y +++ +A
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEADMRF----- 296
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
A ++ L+++H+ + DLKP+NILLDE + D GLA S
Sbjct: 297 --YAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 351
Query: 445 IGVKGSIGYIAPEY-GLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
G+ GY+APE G ++ D +S G ++ +L+ P + H RM
Sbjct: 352 ----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP--FRQHKTKDKHEIDRM 405
Query: 504 AL 505
L
Sbjct: 406 TL 407
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 39/232 (16%)
Query: 273 SSANLIGTGSFGSV-----YKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSI-R 325
S +G G+FG V Y + + TV VK+ H R + ++E + L +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H N+V + AC+ G ++ E+ G L +L + D + + +++
Sbjct: 109 HMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDD 161
Query: 386 ----------NIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF 434
+ + VA + +L +C H DL NILL ++ + DFGLAR
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR- 216
Query: 435 LPPTHVQT-SSIGVKGS----IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
H++ S+ VKG+ + ++APE + DV+SYGI + EL
Sbjct: 217 ----HIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 104
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 105 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 144
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 145 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 196
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 197 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 236
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 91
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 92 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 131
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 132 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDD 183
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 104
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 105 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 144
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 145 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 196
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 197 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 236
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 33/259 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR----ASRSFIAECRALRSIRHRNLVKVF 333
+G+G+FG+V KG + TV V L + +AE ++ + + +V++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C + LV E + G P+N+ + ++ ++ N+++ + V+
Sbjct: 73 GICEAESWM------LVMEMAELG-------PLNKYLQQNRHVKDKNIIE---LVHQVSM 116
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSI 451
+ YL + H DL N+LL + + + DFGL++ L + + + G K +
Sbjct: 117 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPV 172
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSDIMFEGDMN--LHNFARM----A 504
+ APE + S+ DV+S+G+LM E +KP M ++ L RM
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 232
Query: 505 LPDHVMDIVDSTLLNDVED 523
P + D+++ DVE+
Sbjct: 233 CPREMYDLMNLCWTYDVEN 251
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF-LPPTHVQTSSIG 446
+ +++ AL+YLH + + DLK N+LLD E + D+G+ + L P ++ G
Sbjct: 159 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 215
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
YIAPE G + + D ++ G+LM E++ + P DI+ D
Sbjct: 216 TPN---YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 260
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 105
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 106 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 145
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 146 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 197
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 198 EMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 45/281 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRN- 328
+S IG+G V++ VL+E + +K NL ++ S+ E L ++ +
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 329 -LVKVFTACSGVDYQGNDFKALVYEFMQNGSLE--EWLYPVNREDEVDKAPRNLNLLQRL 385
+++++ DY+ D +Y M+ G+++ WL K ++++ +R
Sbjct: 73 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERK 114
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ ++ A+ +H Q H DLKP+N L+ + M+ + DFG+A + P
Sbjct: 115 SYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKD 170
Query: 446 GVKGSIGYIAPEYGLG-SEVSTNG----------DVYSYGILMLELIIRKKPSDIMFEGD 494
G++ Y+ PE S NG DV+S G ++ + K P +
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 230
Query: 495 MNLHNFARMALPDHVMDIVD--STLLNDVEDLAIISNQRQR 533
LH P+H ++ D L DV + + +QR
Sbjct: 231 SKLHAIID---PNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 268
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 95/242 (39%), Gaps = 33/242 (13%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
FS +IG G FG VY R T K++ + R + + L ++ R ++
Sbjct: 190 FSVHRIIGRGGFGEVYGC-----RKADTGKMYAMKCLDKKRIKMKQGETL-ALNERIMLS 243
Query: 332 V-------FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
+ F C + D + + + M G L Y +++ +A
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEADMRF----- 295
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
A ++ L+++H+ + DLKP+NILLDE + D GLA S
Sbjct: 296 --YAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 350
Query: 445 IGVKGSIGYIAPEY-GLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
G+ GY+APE G ++ D +S G ++ +L+ P + H RM
Sbjct: 351 ----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP--FRQHKTKDKHEIDRM 404
Query: 504 AL 505
L
Sbjct: 405 TL 406
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 95/242 (39%), Gaps = 33/242 (13%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVK 331
FS +IG G FG VY R T K++ + R + + L ++ R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGC-----RKADTGKMYAMKCLDKKRIKMKQGETL-ALNERIMLS 244
Query: 332 V-------FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
+ F C + D + + + M G L Y +++ +A
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH---YHLSQHGVFSEADMRF----- 296
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
A ++ L+++H+ + DLKP+NILLDE + D GLA S
Sbjct: 297 --YAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 351
Query: 445 IGVKGSIGYIAPEY-GLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
G+ GY+APE G ++ D +S G ++ +L+ P + H RM
Sbjct: 352 ----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP--FRQHKTKDKHEIDRM 405
Query: 504 AL 505
L
Sbjct: 406 TL 407
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 49/251 (19%)
Query: 278 IGTGSFGSVYKGV-LDEGRTTVTVKVFNLHHHR--ASRSFIAECRALRSIR-HRNLVKVF 333
+G G++G V+K + G K+F+ + A R+F E L + H N+V +
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 334 TACSGVDYQGNDFKA-LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
ND LV+++M+ L+ V R + ++ + + Q + +
Sbjct: 76 NVLRA----DNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKV----- 121
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK---- 448
+ YLH H D+KPSNILL+ E V DFGL+R T++I +
Sbjct: 122 --IKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 449 ---------------GSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSDIMFE 492
+ Y APE LGS T G D++S G ++ E++ K +F
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP----IFP 232
Query: 493 GDMNLHNFARM 503
G ++ R+
Sbjct: 233 GSSTMNQLERI 243
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKEIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E+ G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+++D++ V DFGLA+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLMIDQQGYIKVTDFGLAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 36/214 (16%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFT 334
IG+G+ G + Y +L+ V +K + SR F + A R+ R L+KV
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIK-------KLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 335 ACSGVDYQGNDFKALVYEFMQNGSLEEW--LYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
+ + L+ F SLEE+ +Y V ++ NL+ + ++ + +
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEFQDVYIV-----MELMDANLSQVIQMELDHERM 128
Query: 393 SALDY-----LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
S L Y + H H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVT 188
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ Y APE LG N D++S G +M E+I
Sbjct: 189 R---YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+L+D E + D+GLA F P +V+ +S
Sbjct: 139 EILKALDY----CHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 195 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 243
Query: 502 RMA 504
R+A
Sbjct: 244 RIA 246
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 108/268 (40%), Gaps = 53/268 (19%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV R V VK + +H R R E R L+ ++H N
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENVIG 83
Query: 329 LVKVFTACSGVDYQGNDFKA--LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
L+ VFT + ++ DF LV M L + DE ++ L
Sbjct: 84 LLDVFTPATSIE----DFSEVYLVTTLM-GADLNNIVKCQALSDE------HVQFL---- 128
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ L Y+H H DLKPSN+ ++E+ + DFGLAR G
Sbjct: 129 -VYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTG 179
Query: 447 VKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505
+ Y APE L + D++S G +M EL+ K +F G + R
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA----LFPGSDYIDQLKR--- 232
Query: 506 PDHVMDIVDSTLLNDVEDLAIISNQRQR 533
+M++V + E LA IS++ R
Sbjct: 233 ---IMEVVGTP---SPEVLAKISSEHAR 254
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + + T + + Y APE LG N
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTR---YYRAPEVILGMGYKEN 205
Query: 468 GDVYSYGILMLELI 481
D++S G +M E+I
Sbjct: 206 VDIWSVGCIMGEMI 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + T + + Y APE LG + N
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTR---YYRAPEVILGMGYAAN 205
Query: 468 GDVYSYGILMLELI 481
D++S G +M EL+
Sbjct: 206 VDIWSVGCIMGELV 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 48/228 (21%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRS 323
+ + + + +G+G++GSV + + VK + +H R R E R L+
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR----ELRLLKH 106
Query: 324 IRHRN---LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLN 380
++H N L+ VFT + ++ + ND + + + L N+
Sbjct: 107 MKHENVIGLLDVFTPATSLE-EFNDVYLVTH--LMGADL-----------------NNIV 146
Query: 381 LLQRLN------IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF 434
Q+L + + L Y+H H DLKPSN+ ++E+ + DFGLAR
Sbjct: 147 KCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 202
Query: 435 LPPTHVQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
H G + Y APE L + D++S G +M EL+
Sbjct: 203 ----HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELL 246
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR----ASRSFIAECRALRSIRHRNLVKVF 333
+G+G+FG+V KG + TV V L + +AE ++ + + +V++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C + LV E + G P+N+ + ++ ++ N+++ ++ V+
Sbjct: 75 GICEAESWM------LVMEMAELG-------PLNKYLQQNRHVKDKNIIELVH---QVSM 118
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSI 451
+ YL + H DL N+LL + + + DFGL++ L + + + G K +
Sbjct: 119 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPV 174
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSDIMFEGDMN--LHNFARM----A 504
+ APE + S+ DV+S+G+LM E +KP M ++ L RM
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 234
Query: 505 LPDHVMDIVDSTLLNDVED 523
P + D+++ DVE+
Sbjct: 235 CPREMYDLMNLCWTYDVEN 253
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSF----IAECRALRSIRHRNLVKVF 333
+G+G+FG+V KG + TV V L + + +AE ++ + + +V++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C + LV E + G P+N+ + ++ ++ N+++ + V+
Sbjct: 79 GICEAESWM------LVMEMAELG-------PLNKYLQQNRHVKDKNIIE---LVHQVSM 122
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSI 451
+ YL + H DL N+LL + + + DFGL++ L + + + G K +
Sbjct: 123 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPV 178
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSDIMFEGDMN--LHNFARM----A 504
+ APE + S+ DV+S+G+LM E +KP M ++ L RM
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 238
Query: 505 LPDHVMDIVDSTLLNDVED 523
P + D+++ DVE+
Sbjct: 239 CPREMYDLMNLCWTYDVEN 257
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 33/259 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR----ASRSFIAECRALRSIRHRNLVKVF 333
+G+G+FG+V KG + TV V L + +AE ++ + + +V++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C + LV E + G P+N+ + ++ ++ N+++ + V+
Sbjct: 85 GICEAESWM------LVMEMAELG-------PLNKYLQQNRHVKDKNIIE---LVHQVSM 128
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSI 451
+ YL + H DL N+LL + + + DFGL++ L + + + G K +
Sbjct: 129 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPV 184
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSDIMFEGDMN--LHNFARM----A 504
+ APE + S+ DV+S+G+LM E +KP M ++ L RM
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 244
Query: 505 LPDHVMDIVDSTLLNDVED 523
P + D+++ DVE+
Sbjct: 245 CPREMYDLMNLCWTYDVEN 263
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 45/281 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRN- 328
+S IG+G V++ VL+E + +K NL ++ S+ E L ++ +
Sbjct: 10 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 329 -LVKVFTACSGVDYQGNDFKALVYEFMQNGSLE--EWLYPVNREDEVDKAPRNLNLLQRL 385
+++++ DY+ D +Y M+ G+++ WL K ++++ +R
Sbjct: 69 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERK 110
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ ++ A+ +H Q H DLKP+N L+ + M+ + DFG+A + P
Sbjct: 111 SYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKD 166
Query: 446 GVKGSIGYIAPEYGLG-SEVSTNG----------DVYSYGILMLELIIRKKPSDIMFEGD 494
G++ Y+ PE S NG DV+S G ++ + K P +
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 226
Query: 495 MNLHNFARMALPDHVMDIVD--STLLNDVEDLAIISNQRQR 533
LH P+H ++ D L DV + + +QR
Sbjct: 227 SKLHAIID---PNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 264
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 108/268 (40%), Gaps = 53/268 (19%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV R V VK + +H R R E R L+ ++H N
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENVIG 91
Query: 329 LVKVFTACSGVDYQGNDFKA--LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
L+ VFT + ++ DF LV M L + DE ++ L
Sbjct: 92 LLDVFTPATSIE----DFSEVYLVTTLM-GADLNNIVKCQALSDE------HVQFL---- 136
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ L Y+H H DLKPSN+ ++E+ + DFGLAR G
Sbjct: 137 -VYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTG 187
Query: 447 VKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505
+ Y APE L + D++S G +M EL+ K +F G + R
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA----LFPGSDYIDQLKR--- 240
Query: 506 PDHVMDIVDSTLLNDVEDLAIISNQRQR 533
+M++V + E LA IS++ R
Sbjct: 241 ---IMEVVGTP---SPEVLAKISSEHAR 262
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+++D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE + + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEM 231
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 27/212 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG GS G V + V VK +L + E +R +H N+V+++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 85
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y D +V EF++ G+L + + +E Q + + V AL
Sbjct: 86 ---YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIAAVCLAVLQALSV 131
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIG---YI 454
LH H D+K +ILL + + DFG V K +G ++
Sbjct: 132 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWM 183
Query: 455 APEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
APE D++S GI+++E++ + P
Sbjct: 184 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 36/214 (16%)
Query: 278 IGTGSFG---SVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFT 334
IG+G+ G + Y +L+ V +K + SR F + A R+ R L+KV
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIK-------KLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 335 ACSGVDYQGNDFKALVYEFMQNGSLEEW--LYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
+ + L+ F SLEE+ +Y V ++ NL+ + ++ + +
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEFQDVYIV-----MELMDANLSQVIQMELDHERM 128
Query: 393 SALDY-----LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
S L Y + H H DLKPSNI++ + + DFGLAR + + T +
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVT 188
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ Y APE LG N D++S G +M E+I
Sbjct: 189 R---YYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + + + + Y APE LG N
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR---YYRAPEVILGMGYKEN 205
Query: 468 GDVYSYGILMLELIIRKKPSDIMFEG 493
D++S G +M E++ K I+F G
Sbjct: 206 VDIWSVGCIMGEMVCHK----ILFPG 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 91
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 92 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 131
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 132 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 183
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 139 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 195 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 243
Query: 502 RMA 504
R+A
Sbjct: 244 RIA 246
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 35/216 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG GS G V + V VK +L + E +R +H N+V+++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 96
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y D +V EF++ G+L + + +E Q + + V AL
Sbjct: 97 ---YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIAAVCLAVLQALSV 142
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIG---YI 454
LH H D+K +ILL + + DFG V K +G ++
Sbjct: 143 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWM 194
Query: 455 APE----YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
APE G EV D++S GI+++E++ + P
Sbjct: 195 APELISRLPYGPEV----DIWSLGIMVIEMVDGEPP 226
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF-LPPTHVQTSSIG 446
+ +++ AL+YLH + + DLK N+LLD E + D+G+ + L P + G
Sbjct: 127 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 183
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
YIAPE G + + D ++ G+LM E++ + P DI+ D
Sbjct: 184 TPN---YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 228
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 31/258 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR----ASRSFIAECRALRSIRHRNLVKVF 333
+G+G+FG+V KG + TV V L + +AE ++ + + +V++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C + LV E + G P+N+ + ++ ++ N+++ + V+
Sbjct: 79 GICEAESWM------LVMEMAELG-------PLNKYLQQNRHVKDKNIIE---LVHQVSM 122
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL-PPTHVQTSSIGVKGSIG 452
+ YL + H DL N+LL + + + DFGL++ L + + K +
Sbjct: 123 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVK 179
Query: 453 YIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSDIMFEGDMN--LHNFARM----AL 505
+ APE + S+ DV+S+G+LM E +KP M ++ L RM
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 239
Query: 506 PDHVMDIVDSTLLNDVED 523
P + D+++ DVE+
Sbjct: 240 PREMYDLMNLCWTYDVEN 257
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + T + + Y APE LG N
Sbjct: 147 HRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTR---YYRAPEVILGMGYKEN 203
Query: 468 GDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503
D++S G +M EL+ ++F+G ++ + ++
Sbjct: 204 VDIWSVGCIMGELV----KGSVIFQGTDHIDQWNKV 235
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 560 LDLESLKLAG-SILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGE 618
LD+ S K++ S+L + NL L NN + P +G L L LN N + +
Sbjct: 181 LDISSNKVSDISVLAKLTNLESLIA---TNNQISDITP--LGILTNLDELSLNGNQLK-D 234
Query: 619 IPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLR 678
I L+S +NL + LA NQ+ P L+K+ L LG N + S PL L++L
Sbjct: 235 IGT-LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI--SNISPLAGLTALT 289
Query: 679 KISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGN 738
+ L N L P +S LKNL L L N +S I P S +++ + NK+
Sbjct: 290 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFANNKVSDV 345
Query: 739 IPLDYGFTLQNLQYFSIGTNRITGAIP 765
L L N+ + S G N+I+ P
Sbjct: 346 SSL---ANLTNINWLSAGHNQISDLTP 369
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 65 LMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEM 124
L LT+L +L + NQ P +G L NL+ L+++GN L+ TL S L L++
Sbjct: 194 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDL 249
Query: 125 QGNVFQG---------LTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGV 175
N LT L L N++S P L GL + NL L+ N LE + P
Sbjct: 250 ANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISN- 306
Query: 176 FKNASAISVLGNN 188
KN + +++ NN
Sbjct: 307 LKNLTYLTLYFNN 319
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 4 LDSNRLSGNIPPSIG---NLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGT 60
LD L+GN IG +L L + +++N + P S GL + LT + L N +S
Sbjct: 222 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLS-GLTK-LTELKLGANQISNI 279
Query: 61 IPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLE 120
P L GLT+L L+L+ NQ P + NL NL LT+ N + P + S KL+
Sbjct: 280 SP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 333
Query: 121 ILEMQGN 127
L N
Sbjct: 334 RLFFANN 340
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 20/144 (13%)
Query: 377 RNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD-----EEMVS-HVGDFG 430
R + L+ I+ + LDY+H C I H D+KP N+L++ E ++ + D G
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRCGII--HTDIKPENVLMEIVDSPENLIQIKIADLG 183
Query: 431 LARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIM 490
A + + T+SI + Y +PE LG+ D++S L+ ELI D +
Sbjct: 184 NACWYDEHY--TNSIQTRE---YRSPEVLLGAPWGCGADIWSTACLIFELIT----GDFL 234
Query: 491 FEGDMNLHNFARMALPDHVMDIVD 514
FE D H++ + DH+ I++
Sbjct: 235 FEPDEG-HSYTKDD--DHIAQIIE 255
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 35/216 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG GS G V + V VK +L + E +R +H N+V+++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 94
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y D +V EF++ G+L + + +E Q + + V AL
Sbjct: 95 ---YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIAAVCLAVLQALSV 140
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIG---YI 454
LH H D+K +ILL + + DFG V K +G ++
Sbjct: 141 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWM 192
Query: 455 APE----YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
APE G EV D++S GI+++E++ + P
Sbjct: 193 APELISRLPYGPEV----DIWSLGIMVIEMVDGEPP 224
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 91
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 92 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 131
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DFGLAR H
Sbjct: 132 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDD 183
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 45/281 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRN- 328
+S IG+G V++ VL+E + +K NL ++ S+ E L ++ +
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 329 -LVKVFTACSGVDYQGNDFKALVYEFMQNGSLE--EWLYPVNREDEVDKAPRNLNLLQRL 385
+++++ DY+ D +Y M+ G+++ WL K ++++ +R
Sbjct: 70 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERK 111
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ ++ A+ +H Q H DLKP+N L+ + M+ + DFG+A + P
Sbjct: 112 SYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKD 167
Query: 446 GVKGSIGYIAPEYGLG-SEVSTNG----------DVYSYGILMLELIIRKKPSDIMFEGD 494
G++ Y+ PE S NG DV+S G ++ + K P +
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 227
Query: 495 MNLHNFARMALPDHVMDIVD--STLLNDVEDLAIISNQRQR 533
LH P+H ++ D L DV + + +QR
Sbjct: 228 SKLHAIID---PNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 265
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E+ G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+++D++ V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLMIDQQGYIQVTDFGFAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 38/221 (17%)
Query: 278 IGTGSFGSVY--KGVLDEGRTTVTVKVFNLHHHRAS--RSFIAECRALRSIRHRNLVKVF 333
IG G+F V + +L GR V +K+ + + + E R ++ + H N+VK+F
Sbjct: 23 IGKGNFAKVKLARHILT-GRE-VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
+ L+ E+ G + ++L R E + + + S
Sbjct: 81 EVI-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ----------IVS 125
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK----- 448
A+ Y H Q H DLK N+LLD +M + DFG + ++G K
Sbjct: 126 AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS--------NEFTVGGKLDAFC 174
Query: 449 GSIGYIAPEYGLGSEVS-TNGDVYSYGILMLELIIRKKPSD 488
G+ Y APE G + DV+S G+++ L+ P D
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + D+GLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 34/263 (12%)
Query: 520 DVEDLAIISNQRQRQIRVNNIIEC-----LISMLRIGSKAQKVTILD-------LESLKL 567
D++ L ++N + ++ N I + L S+ ++ + +VT L LE L +
Sbjct: 121 DIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDI 180
Query: 568 AGSILPHIGNLSFLKILNLE-----NNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVN 622
+ + + I L+ K+ NLE NN + P +G L L LN N + +I
Sbjct: 181 SSNKVSDISVLA--KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK-DIGT- 234
Query: 623 LSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISL 682
L+S +NL + LA NQ+ P L+K+ L LG N I +I PL L++L + L
Sbjct: 235 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ-ISNI-SPLAGLTALTNLEL 290
Query: 683 AINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLD 742
N L P +S LKNL L L N +S I P S +++ + NK+ L
Sbjct: 291 NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKVSDVSSL- 345
Query: 743 YGFTLQNLQYFSIGTNRITGAIP 765
L N+ + S G N+I+ P
Sbjct: 346 --ANLTNINWLSAGHNQISDLTP 366
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 65 LMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEM 124
L LT+L +L + NQ P +G L NL+ L+++GN L+ TL S L L++
Sbjct: 191 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDL 246
Query: 125 QGNVFQG---------LTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGV 175
N LT L L N++S P L GL + NL L+ N LE + P
Sbjct: 247 ANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISN- 303
Query: 176 FKNASAISVLGNN 188
KN + +++ NN
Sbjct: 304 LKNLTYLTLYFNN 316
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 4 LDSNRLSGNIPPSIG---NLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGT 60
LD L+GN IG +L L + +++N + P S GL + LT + L N +S
Sbjct: 219 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLS-GLTK-LTELKLGANQISNI 276
Query: 61 IPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLE 120
P L GLT+L L+L+ NQ P + NL NL LT+ N + P + S KL+
Sbjct: 277 SP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 330
Query: 121 IL 122
L
Sbjct: 331 RL 332
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 35/216 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG GS G V + V VK +L + E +R +H N+V+++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 139
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y D +V EF++ G+L + + +E Q + + V AL
Sbjct: 140 ---YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIAAVCLAVLQALSV 185
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIG---YI 454
LH H D+K +ILL + + DFG V K +G ++
Sbjct: 186 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWM 237
Query: 455 APE----YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
APE G EV D++S GI+++E++ + P
Sbjct: 238 APELISRLPYGPEV----DIWSLGIMVIEMVDGEPP 269
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 139 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 195 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 243
Query: 502 RMA 504
R+A
Sbjct: 244 RIA 246
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSF----IAECRALRSIRHRNLVKVF 333
+G+G+FG+V KG + TV V L + + +AE ++ + + +V++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C + LV E + G P+N+ + ++ ++ N+++ + V+
Sbjct: 437 GICEAESWM------LVMEMAELG-------PLNKYLQQNRHVKDKNIIE---LVHQVSM 480
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSI 451
+ YL + H DL N+LL + + + DFGL++ L + + + G K +
Sbjct: 481 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPV 536
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSDIMFEGDMN--LHNFARM----A 504
+ APE + S+ DV+S+G+LM E +KP M ++ L RM
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 596
Query: 505 LPDHVMDIVDSTLLNDVED 523
P + D+++ DVE+
Sbjct: 597 CPREMYDLMNLCWTYDVEN 615
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + + T + + Y APE LG N
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 468 GDVYSYGILMLELI 481
D++S G +M E+I
Sbjct: 206 VDIWSVGCIMGEMI 219
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSF----IAECRALRSIRHRNLVKVF 333
+G+G+FG+V KG + TV V L + + +AE ++ + + +V++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C + LV E + G P+N+ + ++ ++ N+++ + V+
Sbjct: 93 GICEAESWM------LVMEMAELG-------PLNKYLQQNRHVKDKNIIE---LVHQVSM 136
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSI 451
+ YL + H DL N+LL + + + DFGL++ L + + + G K +
Sbjct: 137 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPV 192
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSDIMFEGDMN--LHNFARM----A 504
+ APE + S+ DV+S+G+LM E +KP M ++ L RM
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 252
Query: 505 LPDHVMDIVDSTLLNDVED 523
P + D+++ DVE+
Sbjct: 253 CPREMYDLMNLCWTYDVEN 271
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 20/144 (13%)
Query: 377 RNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD-----EEMVS-HVGDFG 430
R + L+ I+ + LDY+H C I H D+KP N+L++ E ++ + D G
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRCGII--HTDIKPENVLMEIVDSPENLIQIKIADLG 183
Query: 431 LARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIM 490
A + + T+SI + Y +PE LG+ D++S L+ ELI D +
Sbjct: 184 NACWYDEHY--TNSIQTRE---YRSPEVLLGAPWGCGADIWSTACLIFELIT----GDFL 234
Query: 491 FEGDMNLHNFARMALPDHVMDIVD 514
FE D H++ + DH+ I++
Sbjct: 235 FEPDEG-HSYTKDD--DHIAQIIE 255
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 27/212 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG GS G V + V VK +L + E +R +H N+V+++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 89
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y D +V EF++ G+L + + +E Q + + V AL
Sbjct: 90 ---YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----------QIAAVCLAVLQALSV 135
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIG---YI 454
LH H D+K +ILL + + DFG V K +G ++
Sbjct: 136 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWM 187
Query: 455 APEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
APE D++S GI+++E++ + P
Sbjct: 188 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 139 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 195 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 243
Query: 502 RMA 504
R+A
Sbjct: 244 RIA 246
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 139 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 195 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 243
Query: 502 RMA 504
R+A
Sbjct: 244 RIA 246
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + + T + + Y APE LG N
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 468 GDVYSYGILMLELI 481
D++S G +M E+I
Sbjct: 206 VDIWSVGCIMGEMI 219
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 96/207 (46%), Gaps = 19/207 (9%)
Query: 560 LDLESLKLAG-SILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGE 618
LD+ S K++ S+L + NL L NN + P +G L L LN N + +
Sbjct: 177 LDISSNKVSDISVLAKLTNLESLIA---TNNQISDITP--LGILTNLDELSLNGNQLK-D 230
Query: 619 IPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLR 678
I L+S +NL + LA NQ+ P L+K+ L LG N I +I PL L++L
Sbjct: 231 IGT-LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ-ISNI-SPLAGLTALT 285
Query: 679 KISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGN 738
+ L N L P +S LKNL L L N +S I P S +++ + NK+
Sbjct: 286 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFSNNKVSDV 341
Query: 739 IPLDYGFTLQNLQYFSIGTNRITGAIP 765
L L N+ + S G N+I+ P
Sbjct: 342 SSL---ANLTNINWLSAGHNQISDLTP 365
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 65 LMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEM 124
L LT+L +L + NQ P +G L NL+ L+++GN L+ TL S L L++
Sbjct: 190 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDL 245
Query: 125 QGNVFQG---------LTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGV 175
N LT L L N++S P L GL + NL L+ N LE + P
Sbjct: 246 ANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISN- 302
Query: 176 FKNASAISVLGNN 188
KN + +++ NN
Sbjct: 303 LKNLTYLTLYFNN 315
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 4 LDSNRLSGNIPPSIG---NLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGT 60
LD L+GN IG +L L + +++N + P S GL + LT + L N +S
Sbjct: 218 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLS-GLTK-LTELKLGANQISNI 275
Query: 61 IPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLE 120
P L GLT+L L+L+ NQ P + NL NL LT+ N + P + S KL+
Sbjct: 276 SP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 329
Query: 121 ILEMQGN 127
L N
Sbjct: 330 RLFFSNN 336
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+AP L + D ++ G+L+ E+
Sbjct: 198 LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 138 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 193
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 194 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 242
Query: 502 RMA 504
R+A
Sbjct: 243 RIA 245
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 139 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 195 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 243
Query: 502 RMA 504
R+A
Sbjct: 244 RIA 246
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 139 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 195 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 243
Query: 502 RMA 504
R+A
Sbjct: 244 RIA 246
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + + T + + Y APE LG N
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 468 GDVYSYGILMLELI 481
D++S G +M E+I
Sbjct: 206 VDIWSVGCIMGEMI 219
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 138 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 193
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 194 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 242
Query: 502 RMA 504
R+A
Sbjct: 243 RIA 245
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 139 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 195 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 243
Query: 502 RMA 504
R+A
Sbjct: 244 RIA 246
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + + T + + Y APE LG N
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 206
Query: 468 GDVYSYGILMLELI 481
D++S G +M E+I
Sbjct: 207 VDIWSVGCIMGEMI 220
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 139 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 195 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 243
Query: 502 RMA 504
R+A
Sbjct: 244 RIA 246
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 34/263 (12%)
Query: 520 DVEDLAIISNQRQRQIRVNNIIEC-----LISMLRIGSKAQKVTILD-------LESLKL 567
D++ L ++N + ++ N I + L S+ ++ + +VT L LE L +
Sbjct: 121 DIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDI 180
Query: 568 AGSILPHIGNLSFLKILNLE-----NNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVN 622
+ + + I L+ K+ NLE NN + P +G L L LN N + +I
Sbjct: 181 SSNKVSDISVLA--KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK-DIGT- 234
Query: 623 LSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISL 682
L+S +NL + LA NQ+ P L+K+ L LG N I +I PL L++L + L
Sbjct: 235 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ-ISNI-SPLAGLTALTNLEL 290
Query: 683 AINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLD 742
N L P +S LKNL L L N +S I P S +++ + NK+ L
Sbjct: 291 NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKVSDVSSL- 345
Query: 743 YGFTLQNLQYFSIGTNRITGAIP 765
L N+ + S G N+I+ P
Sbjct: 346 --ANLTNINWLSAGHNQISDLTP 366
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 65 LMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEM 124
L LT+L +L + NQ P +G L NL+ L+++GN L+ TL S L L++
Sbjct: 191 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDL 246
Query: 125 QGNVFQG---------LTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGV 175
N LT L L N++S P L GL + NL L+ N LE + P
Sbjct: 247 ANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISN- 303
Query: 176 FKNASAISVLGNN 188
KN + +++ NN
Sbjct: 304 LKNLTYLTLYFNN 316
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 4 LDSNRLSGNIPPSIG---NLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGT 60
LD L+GN IG +L L + +++N + P S GL + LT + L N +S
Sbjct: 219 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLS-GLTK-LTELKLGANQISNI 276
Query: 61 IPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLE 120
P L GLT+L L+L+ NQ P + NL NL LT+ N + P + S KL+
Sbjct: 277 SP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 330
Query: 121 IL 122
L
Sbjct: 331 RL 332
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + + T + + Y APE LG N
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVILGMGYKEN 205
Query: 468 GDVYSYGILMLELI 481
D++S G +M E+I
Sbjct: 206 VDIWSVGCIMGEMI 219
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 35/211 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
IG GS G V + V VK +L + E +R +H N+V+++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 216
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
Y D +V EF++ G+L + + +N Q + + V AL
Sbjct: 217 ---YLVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSV 262
Query: 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIG---YI 454
LH H D+K +ILL + + DFG V K +G ++
Sbjct: 263 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWM 314
Query: 455 APE----YGLGSEVSTNGDVYSYGILMLELI 481
APE G EV D++S GI+++E++
Sbjct: 315 APELISRLPYGPEV----DIWSLGIMVIEMV 341
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 139 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 195 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 243
Query: 502 RMA 504
R+A
Sbjct: 244 RIA 246
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 45/281 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRN- 328
+S IG+G V++ VL+E + +K NL ++ S+ E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 329 -LVKVFTACSGVDYQGNDFKALVYEFMQNGSLE--EWLYPVNREDEVDKAPRNLNLLQRL 385
+++++ DY+ D +Y M+ G+++ WL K ++++ +R
Sbjct: 89 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERK 130
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ ++ A+ +H Q H DLKP+N L+ + M+ + DFG+A + P
Sbjct: 131 SYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKD 186
Query: 446 GVKGSIGYIAPEYGLG-SEVSTNG----------DVYSYGILMLELIIRKKPSDIMFEGD 494
G++ Y+ PE S NG DV+S G ++ + K P +
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 495 MNLHNFARMALPDHVMDIVD--STLLNDVEDLAIISNQRQR 533
LH P+H ++ D L DV + + +QR
Sbjct: 247 SKLHAIID---PNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 284
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 37/231 (16%)
Query: 273 SSANLIGTGSFGSV-----YKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSI-R 325
S +G G+FG V Y + + TV VK+ H R + ++E + L +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H N+V + AC+ G ++ E+ G L +L + D + + +++
Sbjct: 102 HMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDD 154
Query: 386 ----------NIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF 434
+ + VA + +L +C H DL NILL ++ + DFGLAR
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARD 210
Query: 435 LPPTHVQTSSIGVKGS----IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ S+ VKG+ + ++APE + DV+SYGI + EL
Sbjct: 211 IK----NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 257
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 137 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 192
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 193 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 241
Query: 502 RMA 504
R+A
Sbjct: 242 RIA 244
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 139 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 195 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 243
Query: 502 RMA 504
R+A
Sbjct: 244 RIA 246
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 107/263 (40%), Gaps = 38/263 (14%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRA----SRSFIAECRALRSIR 325
D + +++GTG+F V +L E + T + +A S E L I+
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 74
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H N+V A + Y+ L+ + + G L + + E D +
Sbjct: 75 HPNIV----ALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---------- 119
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNIL---LDEEMVSHVGDFGLARFLPPTHVQT 442
+ V A+ YLH H DLKP N+L LDE+ + DFGL++ P V +
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
++ G+ GY+APE S D +S G++ L+ P E D L F +
Sbjct: 177 TAC---GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP--FYDENDAKL--FEQ 229
Query: 503 MALPDHVMDIVDSTLLNDVEDLA 525
+ ++ DS +D+ D A
Sbjct: 230 ILKAEYEF---DSPYWDDISDSA 249
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E+ G + L + R E P ++
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE----PHARFYAAQIV 152
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+++D++ V DFG A+ V+ +
Sbjct: 153 LTFEYLHSLDLIYRD---------LKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWX 198
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF-LPPTHVQTSSIG 446
+ +++ AL+YLH + + DLK N+LLD E + D+G+ + L P + G
Sbjct: 112 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 168
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
YIAPE G + + D ++ G+LM E++ + P DI+ D
Sbjct: 169 TPN---YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 213
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 33/259 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSF----IAECRALRSIRHRNLVKVF 333
+G+G+FG+V KG + TV V L + + +AE ++ + + +V++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C + LV E + G P+N+ + ++ ++ N+++ + V+
Sbjct: 438 GICEAESWM------LVMEMAELG-------PLNKYLQQNRHVKDKNIIE---LVHQVSM 481
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSI 451
+ YL + H DL N+LL + + + DFGL++ L + + + G K +
Sbjct: 482 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPV 537
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSDIMFEGDMN--LHNFARM----A 504
+ APE + S+ DV+S+G+LM E +KP M ++ L RM
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 597
Query: 505 LPDHVMDIVDSTLLNDVED 523
P + D+++ DVE+
Sbjct: 598 CPREMYDLMNLCWTYDVEN 616
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 20/222 (9%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHR 327
+ + +G G+ G V V V VK+ ++ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N+VK + G +GN + L E+ G L + + P E D A R + L
Sbjct: 65 NVVKFY----GHRREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM---- 114
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ + YLH TH D+KP N+LLDE + DFGLA + + +
Sbjct: 115 -----AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 448 KGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSD 488
G++ Y+APE E DV+S GI++ ++ + P D
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 86/213 (40%), Gaps = 22/213 (10%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN---LHHHRASRSFIAECRALRSIRHRN 328
F +IG GSFG V VKV + + + ++E R++ +N
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSE----RNVLLKN 95
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+ F +Q D V +++ G L Y + RE R + A
Sbjct: 96 VKHPFLVGLHFSFQTADKLYFVLDYINGGEL---FYHLQRE-------RCFLEPRARFYA 145
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
++ASAL YLH + DLKP NILLD + + DFGL + + TS+
Sbjct: 146 AEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC-- 200
Query: 449 GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
G+ Y+APE D + G ++ E++
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
+D + +G G+F V + V K+ N R + E R R ++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+V++ + Q F LV++ + G L E + E D + + +Q+
Sbjct: 88 PNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAREFYSEADAS----HCIQQ-- 136
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM---VSHVGDFGLARFLPPTHVQTS 443
+ ++ Y H + H +LKP N+LL + + DFGLA V S
Sbjct: 137 ----ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDS 184
Query: 444 SI--GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G G+ GY++PE S D+++ G+++ L++ P
Sbjct: 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
Query: 390 DVASALDYLHHDCQPI-TTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSS 444
++ ALDY C + H D+KP N+++D E + D+GLA F P +V+ +S
Sbjct: 144 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 199
Query: 445 IGVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
KG + Y +Y L D++S G ++ +I RK+P F G N
Sbjct: 200 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 248
Query: 502 RMA 504
R+A
Sbjct: 249 RIA 251
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E+ G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+++D++ V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLMIDQQGYIKVTDFGFAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 25/232 (10%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA--ECRALRSIRHRNLVKVFTA 335
IG G+FG V+K + V +K + + + A E + L+ ++H N+V +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 336 CSGVDYQGNDFKA---LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
C N KA LV++F ++ L L V + + + R + +L
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQML---------L 135
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSIGVK-GS 450
+ L Y+H + H D+K +N+L+ + V + DFGLAR F + Q + + +
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 451 IGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
+ Y PE LG + D++ G +M E+ R S IM +G+ H A
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR---SPIM-QGNTEQHQLA 240
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF-LPPTHVQTSSIG 446
+ +++ AL+YLH + + DLK N+LLD E + D+G+ + L P + G
Sbjct: 116 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 172
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
YIAPE G + + D ++ G+LM E++ + P DI+ D
Sbjct: 173 TPN---YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 217
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 37/231 (16%)
Query: 273 SSANLIGTGSFGSV-----YKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSI-R 325
S +G G+FG V Y + + TV VK+ H R + ++E + L +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H N+V + AC+ G ++ E+ G L +L + D + + +++
Sbjct: 86 HMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDD 138
Query: 386 ----------NIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF 434
+ + VA + +L +C H DL NILL ++ + DFGLAR
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARD 194
Query: 435 LPPTHVQTSSIGVKGS----IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ S+ VKG+ + ++APE + DV+SYGI + EL
Sbjct: 195 IK----NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 45/281 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRN- 328
+S IG+G V++ VL+E + +K NL ++ S+ E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 329 -LVKVFTACSGVDYQGNDFKALVYEFMQNGSLE--EWLYPVNREDEVDKAPRNLNLLQRL 385
+++++ DY+ D +Y M+ G+++ WL K ++++ +R
Sbjct: 89 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERK 130
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ ++ A+ +H Q H DLKP+N L+ + M+ + DFG+A + P
Sbjct: 131 SYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKD 186
Query: 446 GVKGSIGYIAPEYGLG-SEVSTNG----------DVYSYGILMLELIIRKKPSDIMFEGD 494
G++ Y+ PE S NG DV+S G ++ + K P +
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 495 MNLHNFARMALPDHVMDIVD--STLLNDVEDLAIISNQRQR 533
LH P+H ++ D L DV + + +QR
Sbjct: 247 SKLHAIID---PNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 284
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 33/259 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSF----IAECRALRSIRHRNLVKVF 333
+G+G+FG+V KG + TV V L + + +AE ++ + + +V++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C + LV E + G P+N+ + ++ ++ N+++ ++ V+
Sbjct: 95 GICEAESWM------LVMEMAELG-------PLNKYLQQNRHVKDKNIIELVH---QVSM 138
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSI 451
+ YL + H DL N+LL + + + DFGL++ L + + + G K +
Sbjct: 139 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPV 194
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSDIMFEGDMN--LHNFARM----A 504
+ APE + S+ DV+S+G+LM E +KP M ++ L RM
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 254
Query: 505 LPDHVMDIVDSTLLNDVED 523
P + D+++ DVE+
Sbjct: 255 CPREMYDLMNLCWTYDVEN 273
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 33/259 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSF----IAECRALRSIRHRNLVKVF 333
+G+G+FG+V KG + TV V L + + +AE ++ + + +V++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
C + LV E + G P+N+ + ++ ++ N+++ ++ V+
Sbjct: 95 GICEAESWM------LVMEMAELG-------PLNKYLQQNRHVKDKNIIELVH---QVSM 138
Query: 394 ALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL--PPTHVQTSSIGVKGSI 451
+ YL + H DL N+LL + + + DFGL++ L + + + G K +
Sbjct: 139 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPV 194
Query: 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELI-IRKKPSDIMFEGDMN--LHNFARM----A 504
+ APE + S+ DV+S+G+LM E +KP M ++ L RM
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 254
Query: 505 LPDHVMDIVDSTLLNDVED 523
P + D+++ DVE+
Sbjct: 255 CPREMYDLMNLCWTYDVEN 273
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 37/231 (16%)
Query: 273 SSANLIGTGSFGSV-----YKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSI-R 325
S +G G+FG V Y + + TV VK+ H R + ++E + L +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H N+V + AC+ G ++ E+ G L +L + D + + +++
Sbjct: 104 HMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDD 156
Query: 386 ----------NIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF 434
+ + VA + +L +C H DL NILL ++ + DFGLAR
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARD 212
Query: 435 LPPTHVQTSSIGVKGS----IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ S+ VKG+ + ++APE + DV+SYGI + EL
Sbjct: 213 IK----NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 259
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 42/220 (19%)
Query: 278 IGTGSFGSVYKGVL----DEGRTTVTVKVFNL-----HHHRASRSFIAECRALRSIRHRN 328
IG GSFG K +L ++GR V +K N+ SR +A L +++H N
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYV-IKEINISRMSSKEREESRREVA---VLANMKHPN 84
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVN----REDEVDKAPRNLNLLQR 384
+V+ + ++ N +V ++ + G L + + +ED++
Sbjct: 85 IVQYRES-----FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI------------ 127
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSS 444
L+ + + AL ++H H D+K NI L ++ +GDFG+AR L T V+ +
Sbjct: 128 LDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-VELAR 183
Query: 445 IGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRK 484
+ G+ Y++PE + D+++ G ++ EL K
Sbjct: 184 ACI-GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + + + + Y APE LG N
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR---YYRAPEVILGMGYKEN 205
Query: 468 GDVYSYGILMLELIIRKKPSDIMFEG 493
D++S G +M E++ K I+F G
Sbjct: 206 VDLWSVGCIMGEMVCHK----ILFPG 227
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 27/225 (12%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
+ + +IG G+FG V + +K+ + R+ +F E R + + +
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 327 R-NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
+V++F A +Q + + +V E+M G L VN D +
Sbjct: 134 SPWVVQLFCA-----FQDDKYLYMVMEYMPGGDL------VNLMSNYDVPEKWAKFY--- 179
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+V ALD +H H D+KP N+LLD+ + DFG + T +
Sbjct: 180 --TAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT 234
Query: 446 GVKGSIGYIAPE----YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
V G+ YI+PE G D +S G+ + E+++ P
Sbjct: 235 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 13/140 (9%)
Query: 572 LPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIR 631
L H +LS L+I N+ N F ++ L RL LN NS+ E+P + + SNL
Sbjct: 225 LWHALDLSNLQIFNISANIFKYDF------LTRLY---LNGNSLT-ELPAEIKNLSNLRV 274
Query: 632 IGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSI 691
+ L+ N+L +P++ GS +++ F+N++ ++P GNL +L+ + + N L
Sbjct: 275 LDLSHNRLTS-LPAELGSCFQLKYFYF-FDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQF 332
Query: 692 PFTLS-KLKNLVILYLGVNR 710
L+ K +I YL NR
Sbjct: 333 LKILTEKSVTGLIFYLRDNR 352
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 560 LDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEI 619
LDL +L++ +I +I FL L L NS T E+P+EI L L+V DL++N + +
Sbjct: 229 LDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-L 285
Query: 620 PVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNL 663
P L SC L N ++ +P +FG+L ++ L + N L
Sbjct: 286 PAELGSCFQLKYFYFFDN-MVTTLPWEFGNLCNLQFLGVEGNPL 328
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 27/108 (25%)
Query: 2 LALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTI 61
L L+ N L+ +P I NL L +S N L S+P+ LG C L F+N ++
Sbjct: 252 LYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCFQLKYFYFFDNMVT--- 306
Query: 62 PPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEI 109
+ P E GNL NL+ L V GN L+ +
Sbjct: 307 ----------------------TLPWEFGNLCNLQFLGVEGNPLEKQF 332
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 21/122 (17%)
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPPTH---VQTSSI 445
++ ALDY H H D+KP N+++D + + D+GLA F P V+ +S
Sbjct: 140 ELLKALDYCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 196
Query: 446 GVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
KG + Y +Y L D++S G ++ +I R++P F G N R
Sbjct: 197 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRREP---FFHGQDNYDQLVR 245
Query: 503 MA 504
+A
Sbjct: 246 IA 247
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 91
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ LVK+ ++ N +V E+ G + L + R E P
Sbjct: 92 KRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE----PH 142
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+++D++ V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLMIDQQGYIKVTDFGFAK---- 189
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 190 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 37/231 (16%)
Query: 273 SSANLIGTGSFGSV-----YKGVLDEGRTTVTVKVFNLHHHRASR-SFIAECRALRSI-R 325
S +G G+FG V Y + + TV VK+ H R + ++E + L +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H N+V + AC+ G ++ E+ G L +L + D + + +++
Sbjct: 109 HMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDD 161
Query: 386 ----------NIAIDVASALDYL-HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF 434
+ + VA + +L +C H DL NILL ++ + DFGLAR
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARD 217
Query: 435 LPPTHVQTSSIGVKGS----IGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
+ S+ VKG+ + ++APE + DV+SYGI + EL
Sbjct: 218 IK----NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 45/281 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRN- 328
+S IG+G V++ VL+E + +K NL ++ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 329 -LVKVFTACSGVDYQGNDFKALVYEFMQNGSLE--EWLYPVNREDEVDKAPRNLNLLQRL 385
+++++ DY+ D +Y M+ G+++ WL K ++++ +R
Sbjct: 117 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERK 158
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ ++ A+ +H Q H DLKP+N L+ + M+ + DFG+A + P
Sbjct: 159 SYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKD 214
Query: 446 GVKGSIGYIAPEYGLG-SEVSTNG----------DVYSYGILMLELIIRKKPSDIMFEGD 494
G++ Y+ PE S NG DV+S G ++ + K P +
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 495 MNLHNFARMALPDHVMDIVD--STLLNDVEDLAIISNQRQR 533
LH P+H ++ D L DV + + +QR
Sbjct: 275 SKLHAIID---PNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 45/281 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRN- 328
+S IG+G V++ VL+E + +K NL ++ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 329 -LVKVFTACSGVDYQGNDFKALVYEFMQNGSLE--EWLYPVNREDEVDKAPRNLNLLQRL 385
+++++ DY+ D +Y M+ G+++ WL K ++++ +R
Sbjct: 117 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERK 158
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ ++ A+ +H Q H DLKP+N L+ + M+ + DFG+A + P
Sbjct: 159 SYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKD 214
Query: 446 GVKGSIGYIAPEYGLG-SEVSTNG----------DVYSYGILMLELIIRKKPSDIMFEGD 494
G++ Y+ PE S NG DV+S G ++ + K P +
Sbjct: 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 495 MNLHNFARMALPDHVMDIVD--STLLNDVEDLAIISNQRQR 533
LH P+H ++ D L DV + + +QR
Sbjct: 275 SKLHAIID---PNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 105/263 (39%), Gaps = 38/263 (14%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFNLHHHRASR-SFIAECRALRSIR 325
D + +++GTG+F V +L E + T V +K S E L I+
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H N+V + Y+ L+ + + G L + + E D +
Sbjct: 75 HPNIVALDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---------- 119
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNIL---LDEEMVSHVGDFGLARFLPPTHVQT 442
+ V A+ YLH H DLKP N+L LDE+ + DFGL++ P V +
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
++ G GY+APE S D +S G++ L+ P E D L F +
Sbjct: 177 TACGTP---GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP--FYDENDAKL--FEQ 229
Query: 503 MALPDHVMDIVDSTLLNDVEDLA 525
+ ++ DS +D+ D A
Sbjct: 230 ILKAEYEF---DSPYWDDISDSA 249
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 107/263 (40%), Gaps = 38/263 (14%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFNLHHHRASR-SFIAECRALRSIR 325
D + +++GTG+F V +L E + T V +K S E L I+
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H N+V A + Y+ L+ + + G L + + E D +
Sbjct: 75 HPNIV----ALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---------- 119
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNIL---LDEEMVSHVGDFGLARFLPPTHVQT 442
+ V A+ YLH H DLKP N+L LDE+ + DFGL++ P V +
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
++ G+ GY+APE S D +S G++ L+ P E D L F +
Sbjct: 177 TAC---GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP--FYDENDAKL--FEQ 229
Query: 503 MALPDHVMDIVDSTLLNDVEDLA 525
+ ++ DS +D+ D A
Sbjct: 230 ILKAEYEF---DSPYWDDISDSA 249
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 21/122 (17%)
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPPTH---VQTSSI 445
++ ALDY H H D+KP N+++D + + D+GLA F P V+ +S
Sbjct: 145 ELLKALDYCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 201
Query: 446 GVKGS---IGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
KG + Y +Y L D++S G ++ +I R++P F G N R
Sbjct: 202 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRREP---FFHGQDNYDQLVR 250
Query: 503 MA 504
+A
Sbjct: 251 IA 252
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 107/263 (40%), Gaps = 38/263 (14%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFNLHHHRASR-SFIAECRALRSIR 325
D + +++GTG+F V +L E + T V +K S E L I+
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H N+V A + Y+ L+ + + G L + + E D +
Sbjct: 75 HPNIV----ALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---------- 119
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNIL---LDEEMVSHVGDFGLARFLPPTHVQT 442
+ V A+ YLH H DLKP N+L LDE+ + DFGL++ P V +
Sbjct: 120 RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
++ G+ GY+APE S D +S G++ L+ P E D L F +
Sbjct: 177 TAC---GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP--FYDENDAKL--FEQ 229
Query: 503 MALPDHVMDIVDSTLLNDVEDLA 525
+ ++ DS +D+ D A
Sbjct: 230 ILKAEYEF---DSPYWDDISDSA 249
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 45/281 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRN- 328
+S IG+G V++ VL+E + +K NL ++ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 329 -LVKVFTACSGVDYQGNDFKALVYEFMQNGSLE--EWLYPVNREDEVDKAPRNLNLLQRL 385
+++++ DY+ D +Y M+ G+++ WL K ++++ +R
Sbjct: 117 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERK 158
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
+ ++ A+ +H Q H DLKP+N L+ + M+ + DFG+A + P
Sbjct: 159 SYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKD 214
Query: 446 GVKGSIGYIAPEYGLG-SEVSTNG----------DVYSYGILMLELIIRKKPSDIMFEGD 494
G++ Y+ PE S NG DV+S G ++ + K P +
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 495 MNLHNFARMALPDHVMDIVD--STLLNDVEDLAIISNQRQR 533
LH P+H ++ D L DV + + +QR
Sbjct: 275 SKLHAIID---PNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTA 335
+G G+F V + V K+ N R + E R R ++H N+V++ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
S +G+ + L+++ + G L E + E D + + +Q++ L
Sbjct: 90 ISE---EGHHY--LIFDLVTGGELFEDIVAREYYSEADAS----HCIQQI---------L 131
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEM---VSHVGDFGLARFLPPTHVQTSSIGVKGSIG 452
+ + H Q H DLKP N+LL ++ + DFGLA + Q + G G+ G
Sbjct: 132 EAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPG 189
Query: 453 YIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
Y++PE D+++ G+++ L++ P
Sbjct: 190 YLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR---- 327
+ +IG G FG V K + V +K+ + R R E R L +R +
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 328 --NLVKVFTACSGVDYQGNDFKAL---VYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
N++ + + ++ F+ L +YE ++ + + P+ R+
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK------------- 204
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS--HVGDFGLARFLPPTHV 440
A + LD LH + HCDLKP NILL ++ S V DFG + +
Sbjct: 205 ----FAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EH 253
Query: 441 QTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
Q ++ Y APE LG+ D++S G ++ EL+
Sbjct: 254 QRVYXXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELL 293
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
IA+ + AL++LH I H D+KPSN+L++ DFG++ +L +
Sbjct: 140 KIAVSIVKALEHLHSKLSVI--HRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 446 GVKGSIGYIAPEYGLGSEVSTNG-----DVYSYGILMLELIIRKKPSD 488
G K Y APE + E++ G D++S GI +EL I + P D
Sbjct: 198 GCKP---YXAPER-INPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 560 LDLESLKLAG-SILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGE 618
LD+ S K++ S+L + NL L NN + P +G L L LN N + +
Sbjct: 177 LDISSNKVSDISVLAKLTNLESLIA---TNNQISDITP--LGILTNLDELSLNGNQLK-D 230
Query: 619 IPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLR 678
I L+S +NL + LA NQ+ P L+K+ L LG N + S PL L++L
Sbjct: 231 IGT-LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI--SNISPLAGLTALT 285
Query: 679 KISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGN 738
+ L N L P +S LKNL L L N +S I P S +++ + NK+
Sbjct: 286 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKVSDV 341
Query: 739 IPLDYGFTLQNLQYFSIGTNRITGAIP 765
L L N+ + S G N+I+ P
Sbjct: 342 SSL---ANLTNINWLSAGHNQISDLTP 365
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 65 LMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEM 124
L LT+L +L + NQ P +G L NL+ L+++GN L+ TL S L L++
Sbjct: 190 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDL 245
Query: 125 QGNVFQG---------LTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGV 175
N LT L L N++S P L GL + NL L+ N LE + P
Sbjct: 246 ANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISN- 302
Query: 176 FKNASAISVLGNN 188
KN + +++ NN
Sbjct: 303 LKNLTYLTLYFNN 315
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 4 LDSNRLSGNIPPSIG---NLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGT 60
LD L+GN IG +L L + +++N + P S GL + LT + L N +S
Sbjct: 218 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLS-GLTK-LTELKLGANQISNI 275
Query: 61 IPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLE 120
P L GLT+L L+L+ NQ P + NL NL LT+ N + P + S KL+
Sbjct: 276 SP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 329
Query: 121 IL 122
L
Sbjct: 330 RL 331
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG 449
+++ AL +LH Q + DLKP NI+L+ + + DFGL + H T + G
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCG 183
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELII---------RKKPSDIMFEGDMNL 497
+I Y+APE + S + D +S G LM +++ RKK D + + +NL
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
+D + +G G+F V + V K+ N R + E R R ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+V++ + Q F LV++ + G L E + E D + + +Q+
Sbjct: 65 PNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAREFYSEADAS----HCIQQ-- 113
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM---VSHVGDFGLARFLPPTHVQTS 443
+ ++ Y H + H +LKP N+LL + + DFGLA V S
Sbjct: 114 ----ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDS 161
Query: 444 SI--GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G G+ GY++PE S D+++ G+++ L++ P
Sbjct: 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 560 LDLESLKLAG-SILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGE 618
LD+ S K++ S+L + NL L NN + P +G L L LN N + +
Sbjct: 182 LDISSNKVSDISVLAKLTNLESLIA---TNNQISDITP--LGILTNLDELSLNGNQLK-D 235
Query: 619 IPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLR 678
I L+S +NL + LA NQ+ P L+K+ L LG N + S PL L++L
Sbjct: 236 IGT-LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI--SNISPLAGLTALT 290
Query: 679 KISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGN 738
+ L N L P +S LKNL L L N +S I P S +++ + NK+
Sbjct: 291 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKVSDV 346
Query: 739 IPLDYGFTLQNLQYFSIGTNRITGAIP 765
L L N+ + S G N+I+ P
Sbjct: 347 SSL---ANLTNINWLSAGHNQISDLTP 370
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 65 LMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEM 124
L LT+L +L + NQ P +G L NL+ L+++GN L+ TL S L L++
Sbjct: 195 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDL 250
Query: 125 QGNVFQG---------LTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGMVPTEGV 175
N LT L L N++S P L GL + NL L+ N LE + P
Sbjct: 251 ANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISN- 307
Query: 176 FKNASAISVLGNN 188
KN + +++ NN
Sbjct: 308 LKNLTYLTLYFNN 320
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 4 LDSNRLSGNIPPSIG---NLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGT 60
LD L+GN IG +L L + +++N + P S GL + LT + L N +S
Sbjct: 223 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLS-GLTK-LTELKLGANQISNI 280
Query: 61 IPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLE 120
P L GLT+L L+L+ NQ P + NL NL LT+ N + P + S KL+
Sbjct: 281 SP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 334
Query: 121 IL 122
L
Sbjct: 335 RL 336
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA---------ECRALR 322
+S+ + +G+G+FG V+ V E V VK F +I E L
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVK-FIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
+ H N++KV ++ F LV E ++GS + ++R +D+ P +
Sbjct: 85 RVEHANIIKVLDI-----FENQGFFQLVME--KHGSGLDLFAFIDRHPRLDE-PLASYIF 136
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
++L A+ D +H D +K NI++ E+ + DFG A +L +
Sbjct: 137 RQLVSAVGYLRLKDIIHRD---------IKDENIVIAEDFTIKLIDFGSAAYLERGKLFY 187
Query: 443 SSIGVKGSIGYIAPEYGLGSEVS-TNGDVYSYGILMLELIIRKKP 486
+ G+I Y APE +G+ +++S G+ + L+ + P
Sbjct: 188 TFC---GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKG 449
+++ AL +LH Q + DLKP NI+L+ + + DFGL + H T + G
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCG 183
Query: 450 SIGYIAPEYGLGSEVSTNGDVYSYGILMLELII---------RKKPSDIMFEGDMNL 497
+I Y+APE + S + D +S G LM +++ RKK D + + +NL
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 36/214 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
L+ VFT ++ + ND + + L + + V + +Q L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH-----------LMGADLNNIVKSQKLTDDHVQFL--I 131
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK 448
+ L Y+H H DLKPSN+ ++E+ + DFGL R H G
Sbjct: 132 YQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTGYV 183
Query: 449 GSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
+ Y APE L + D++S G +M EL+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR--ASRSFIAECRALRSIRHRNLVKVFTA 335
IG G++G+V+K E V +K L S + E L+ ++H+N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH-- 67
Query: 336 CSGVDYQGNDFK-ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASA 394
D +D K LV+EF + L+++ N ++D L Q L + +
Sbjct: 68 ----DVLHSDKKLTLVFEFC-DQDLKKYFDSCN--GDLDPEIVKSFLFQLLK-GLGFCHS 119
Query: 395 LDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSIGVKGSIGY 453
+ LH D LKP N+L++ + +FGLAR F P ++ + ++ Y
Sbjct: 120 RNVLHRD---------LKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV---VTLWY 167
Query: 454 IAPEYGLGSEV-STNGDVYSYGILMLELIIRKKP 486
P+ G+++ ST+ D++S G + EL +P
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R +++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E+ G + L + R E P ++
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSE----PHARFYAAQIV 152
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 153 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIKVADFGFAK-----RVKGRTWX 198
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ Y+APE L + D ++ G+L+ E+
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 26/214 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH 326
D F +GTGSFG V E +K+ + + + E R L+++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
LVK+ ++ N +V E++ G + L + R E P ++
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE----PHARFYAAQIV 151
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + +LD ++ D LKP N+L+D++ V DFG A+ V+ +
Sbjct: 152 LTFEYLHSLDLIYRD---------LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 197
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+ G+ +APE L + D ++ G+L+ E+
Sbjct: 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 31/229 (13%)
Query: 275 ANLIGTGSFGSVYKGVLDE---GRTTVTVKVFNLHHHR--ASRSFIAECRALRSIRHRNL 329
+L+G GS+G V K VLD R V + + E + LR +RH+N+
Sbjct: 10 GDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPV-NREDEVDKAP-RNLNLLQRLNI 387
+++ VD N+ K +Y M+ Y V ++ +D P + + Q
Sbjct: 69 IQL------VDVLYNEEKQKMYMVME--------YCVCGMQEMLDSVPEKRFPVCQAHGY 114
Query: 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGV 447
+ L+YLH H D+KP N+LL + G+A L P +
Sbjct: 115 FCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS 171
Query: 448 KGSIGYIAPEY--GLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494
+GS + PE GL + D++S G+ + + P FEGD
Sbjct: 172 QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP----FEGD 216
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 25/223 (11%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
TD + +G G+F V + + K+ N R + E R R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+V++ + S F LV++ + G L E + E D + +L+ +N
Sbjct: 63 PNIVRLHDSISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE---MVSHVGDFGLARFLPPTHVQTS 443
H I H DLKP N+LL + + DFGLA + Q +
Sbjct: 118 ------------HCHLNGIV-HRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQA 162
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G G+ GY++PE D+++ G+++ L++ P
Sbjct: 163 WFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 84/219 (38%), Gaps = 34/219 (15%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--RSFIAECRALRSIRHRNLVKVFTA 335
IG G+F V V VK+ + +S + E R + + H N+VK+F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASAL 395
+ LV E+ G + ++L R E + + + SA+
Sbjct: 82 I-----ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ----------IVSAV 126
Query: 396 DYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK-----GS 450
Y H Q H DLK N+LLD + + DFG + + G K G+
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFS--------NEFTFGNKLDAFCGA 175
Query: 451 IGYIAPEYGLGSEVS-TNGDVYSYGILMLELIIRKKPSD 488
Y APE G + DV+S G+++ L+ P D
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
+D + +G G+F V + V K+ N R + E R R ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+V++ + Q F LV++ + G L E + E D + + +Q+
Sbjct: 65 PNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAREFYSEADAS----HCIQQ-- 113
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM---VSHVGDFGLARFLPPTHVQTS 443
+ ++ Y H + H +LKP N+LL + + DFGLA V S
Sbjct: 114 ----ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDS 161
Query: 444 SI--GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G G+ GY++PE S D+++ G+++ L++ P
Sbjct: 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 90/241 (37%), Gaps = 29/241 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVF---NLHHHRASRSFIAECRALRSIRH 326
D F +G G FG+VY + V +KV + E + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+++++ + L+ E+ G L + L DE A
Sbjct: 83 PNILRLYNY-----FYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA----------T 127
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
I ++A AL Y H H D+KP N+LL + + DFG + P +T
Sbjct: 128 IMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC-- 182
Query: 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALP 506
G++ Y+ PE G + D++ G+L EL++ P FE + + R+
Sbjct: 183 --GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP----FESASHNETYRRIVKV 236
Query: 507 D 507
D
Sbjct: 237 D 237
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 272 FSSANLIGTGSFGS-VYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALR-SIRHRNL 329
F +++G G+ G+ VY+G+ D R ++ A R E + LR S H N+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFD-NRDVAVKRILPECFSFADR----EVQLLRESDEHPNV 80
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
++ F C+ D Q F+ + E +L+E+ V ++D + LLQ+
Sbjct: 81 IRYF--CTEKDRQ---FQYIAIELCA-ATLQEY---VEQKDFAHLGLEPITLLQQ----- 126
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDE-----EMVSHVGDFGLARFLP-PTHVQTS 443
S L +LH H DLKP NIL+ ++ + + DFGL + L H +
Sbjct: 127 -TTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR 182
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNG----DVYSYGILMLELI 481
GV G+ G+IAPE L + N D++S G + +I
Sbjct: 183 RSGVPGTEGWIAPEM-LSEDCKENPTYTVDIFSAGCVFYYVI 223
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
TD + +G G+F V + + K+ N R + E R R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+V++ + S F LV++ + G L E + E D + + +Q++
Sbjct: 63 PNIVRLHDSISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADAS----HCIQQI- 112
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE---MVSHVGDFGLARFLPPTHVQTS 443
L+ ++H H DLKP N+LL + + DFGLA + Q +
Sbjct: 113 --------LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQA 162
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G G+ GY++PE D+++ G+++ L++ P
Sbjct: 163 WFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
+D + +G G+F V + V K+ N R + E R R ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+V++ + Q F LV++ + G L E + E D + + +Q+
Sbjct: 64 PNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVAREFYSEADAS----HCIQQ-- 112
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM---VSHVGDFGLARFLPPTHVQTS 443
+ ++ Y H + H +LKP N+LL + + DFGLA V S
Sbjct: 113 ----ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDS 160
Query: 444 SI--GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G G+ GY++PE S D+++ G+++ L++ P
Sbjct: 161 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 47/168 (27%)
Query: 628 NLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLS------SLRKIS 681
NLI + L NQ+ P +L+KI L L N PL N+S S++ +
Sbjct: 70 NLIGLELKDNQITDLTP--LKNLTKITELELSGN--------PLKNVSAIAGLQSIKTLD 119
Query: 682 LAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPL 741
L + P L+ L NL +LYL +N+++ I P +
Sbjct: 120 LTSTQITDVTP--LAGLSNLQVLYLDLNQITNISPLA----------------------- 154
Query: 742 DYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789
G T NLQY SIG N++ P ++N SKL +A +NK++ P
Sbjct: 155 --GLT--NLQYLSIGNNQVNDLTP--LANLSKLTTLRADDNKISDISP 196
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + DF LAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 92
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ L K+ ++ N +V E+ G + L + R E P
Sbjct: 93 KRILQAVNFPFLTKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE----PH 143
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+++D++ V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLMIDQQGYIKVTDFGFAK---- 190
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 191 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 25/232 (10%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA--ECRALRSIRHRNLVKVFTA 335
IG G+FG V+K + V +K + + + A E + L+ ++H N+V +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 336 CSGVDYQGNDFKA---LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
C N K LV++F ++ L L V + + + R + +L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQML---------L 135
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSIGVK-GS 450
+ L Y+H + H D+K +N+L+ + V + DFGLAR F + Q + + +
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 451 IGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
+ Y PE LG + D++ G +M E+ R S IM +G+ H A
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR---SPIM-QGNTEQHQLA 240
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 92
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ L K+ ++ N +V E+ G + L + R E P
Sbjct: 93 KRILQAVNFPFLTKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE----PH 143
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+++D++ V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLMIDQQGYIKVTDFGFAK---- 190
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 191 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
Query: 341 YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHH 400
++ +DF +V E + SL E +++ + P +++ + YLH+
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE----LHKRRKAVTEPEARYFMRQ------TIQGVQYLHN 160
Query: 401 DCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK---GSIGYIAPE 457
+ H DLK N+ L+++M +GDFGLA T ++ K G+ YIAPE
Sbjct: 161 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKTLCGTPNYIAPE 212
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
S D++S G ++ L++ K P
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
Query: 341 YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHH 400
++ +DF +V E + SL E +++ + P +++ + YLH+
Sbjct: 95 FEDDDFVYVVLEICRRRSLLE----LHKRRKAVTEPEARYFMRQ------TIQGVQYLHN 144
Query: 401 DCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK---GSIGYIAPE 457
+ H DLK N+ L+++M +GDFGLA T ++ K G+ YIAPE
Sbjct: 145 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKDLCGTPNYIAPE 196
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
S D++S G ++ L++ K P
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
Query: 341 YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHH 400
++ +DF +V E + SL E +++ + P +++ + YLH+
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE----LHKRRKAVTEPEARYFMRQ------TIQGVQYLHN 160
Query: 401 DCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK---GSIGYIAPE 457
+ H DLK N+ L+++M +GDFGLA T ++ K G+ YIAPE
Sbjct: 161 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKXLCGTPNYIAPE 212
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
S D++S G ++ L++ K P
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + FGLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
Query: 341 YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHH 400
++ +DF +V E + SL E +++ + P +++ + YLH+
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE----LHKRRKAVTEPEARYFMRQ------TIQGVQYLHN 160
Query: 401 DCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVK---GSIGYIAPE 457
+ H DLK N+ L+++M +GDFGLA T ++ K G+ YIAPE
Sbjct: 161 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKDLCGTPNYIAPE 212
Query: 458 YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
S D++S G ++ L++ K P
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 44/223 (19%)
Query: 270 DGFSSANLIGTGSFGSVY------------KGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317
D F +GTGSFG V +LD+ + VK+ + H + E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV---VKLKQIEHT------LNE 92
Query: 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPR 377
R L+++ L K+ ++ N +V E+ G + L + R E P
Sbjct: 93 KRILQAVNFPFLTKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE----PH 143
Query: 378 NLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437
++ + + +LD ++ D LKP N+++D++ V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRD---------LKPENLMIDQQGYIKVTDFGFAK---- 190
Query: 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
V+ + + G+ Y+APE L + D ++ G+L+ E+
Sbjct: 191 -RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + D GLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467
H DLKPSNI++ + + DFGLAR + + + + Y APE LG N
Sbjct: 151 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTR---YYRAPEVILGMGYKEN 207
Query: 468 GDVYSYGILMLELI 481
D++S G +M E+I
Sbjct: 208 VDIWSVGCIMGEMI 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 104/259 (40%), Gaps = 34/259 (13%)
Query: 269 TDGFSSANLIGTGSFGSVY---KGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR 325
+D + +G+G++G V + R +K ++ S + + E L+ +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H N++K++ ++ LV E + G L + + + EVD A
Sbjct: 80 HPNIMKLYEF-----FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV--------- 125
Query: 386 NIAIDVASALDYLH-HDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQ 441
I V S YLH H+ H DLKP N+LL+ + + + DFGL+
Sbjct: 126 -IMKQVLSGTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM 180
Query: 442 TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
+ G+ YIAPE L + DV+S G+++ L+ P F G +
Sbjct: 181 KERL---GTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP----FGGQTDQEILK 232
Query: 502 RMALPDHVMDIVDSTLLND 520
R+ D D T ++D
Sbjct: 233 RVEKGKFSFDPPDWTQVSD 251
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 25/232 (10%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA--ECRALRSIRHRNLVKVFTA 335
IG G+FG V+K + V +K + + + A E + L+ ++H N+V +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 336 CSGVDYQGNDFKA---LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
C N K LV++F ++ L L V + + + R + +L LN
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQML--LN------ 136
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSIGVK-GS 450
L Y+H + H D+K +N+L+ + V + DFGLAR F + Q + + +
Sbjct: 137 -GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 451 IGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
+ Y PE LG + D++ G +M E+ R S IM +G+ H A
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR---SPIM-QGNTEQHQLA 240
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + D GLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 24/218 (11%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRA---SRSFIAECRALRSIRHRNLVK 331
+G FG VYKG L G T V + L F E ++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLY------PVNREDEVDKAPRNLNLLQRL 385
+ GV + ++++ + +G L E+L V D+ L +
Sbjct: 94 LL----GVVTKDQPL-SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 386 NIAIDVASALDYL--HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
++ +A+ ++YL HH H DL N+L+ +++ + D GL R +
Sbjct: 149 HLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 203
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I ++APE + + S + D++SYG+++ E+
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 25/232 (10%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA--ECRALRSIRHRNLVKVFTA 335
IG G+FG V+K + V +K + + + A E + L+ ++H N+V +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 336 CSGVDYQGNDFKA---LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
C N K LV++F ++ L L V + + + R + +L
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQML---------L 134
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR-FLPPTHVQTSSIGVK-GS 450
+ L Y+H + H D+K +N+L+ + V + DFGLAR F + Q + + +
Sbjct: 135 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 451 IGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501
+ Y PE LG + D++ G +M E+ R S IM +G+ H A
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR---SPIM-QGNTEQHQLA 239
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRA--SRSFIA----ECRALRSIR 325
F L+G G+FG V +L + + T + ++ +A E R L++ R
Sbjct: 153 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H F +Q +D V E+ G L + ++RE R + +
Sbjct: 210 H-----PFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE-------RVFSEDRAR 254
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
++ SALDYLH + + + DLK N++LD++ + DFGL + +
Sbjct: 255 FYGAEIVSALDYLHSEKNVV--YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 312
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ Y+APE ++ D + G++M E++ + P
Sbjct: 313 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 374 KAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR 433
+ P +L ++ +AI AL YL I H D+KPSNILLDE + DFG++
Sbjct: 118 QGPIPERILGKMTVAI--VKALYYLKEKHGVI--HRDVKPSNILLDERGQIKLCDFGISG 173
Query: 434 FLPPTHVQTSSIGVKGSIGYIAPEY-----GLGSEVSTNGDVYSYGILMLELIIRKKP 486
L + S G Y+APE + DV+S GI ++EL + P
Sbjct: 174 RLVDDKAKDRSAGC---AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRA--SRSFIA----ECRALRSIR 325
F L+G G+FG V +L + + T + ++ +A E R L++ R
Sbjct: 150 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H F +Q +D V E+ G L + ++RE R + +
Sbjct: 207 H-----PFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE-------RVFSEDRAR 251
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
++ SALDYLH + + + DLK N++LD++ + DFGL + +
Sbjct: 252 FYGAEIVSALDYLHSEKNVV--YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 309
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ Y+APE ++ D + G++M E++ + P
Sbjct: 310 C--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 24/218 (11%)
Query: 278 IGTGSFGSVYKGVL---DEGRTTVTVKVFNLHHHRA---SRSFIAECRALRSIRHRNLVK 331
+G FG VYKG L G T V + L F E ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLY------PVNREDEVDKAPRNLNLLQRL 385
+ GV + ++++ + +G L E+L V D+ L +
Sbjct: 77 LL----GVVTKDQPL-SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 386 NIAIDVASALDYL--HHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
++ +A+ ++YL HH H DL N+L+ +++ + D GL R +
Sbjct: 132 HLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 186
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
I ++APE + + S + D++SYG+++ E+
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
+ + +IG G+FG V R +K+ + R+ +F E R + + +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 327 R-NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
+V++F A +Q + + +V E+M G L VN D + R
Sbjct: 133 SPWVVQLFYA-----FQDDRYLYMVMEYMPGGDL------VNLMSNYDVPEK----WARF 177
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
A +V ALD +H H D+KP N+LLD+ + DFG + +
Sbjct: 178 YTA-EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 446 GVKGSIGYIAPE----YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
V G+ YI+PE G D +S G+ + E+++ P
Sbjct: 234 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 48/220 (21%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFN------LHHHRASRSFIAECRALRSIRHRN--- 328
+G+G++GSV + V VK + +H R R E R L+ ++H N
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIG 85
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN-- 386
L+ VFT ++ + ND + + + L N+ Q+L
Sbjct: 86 LLDVFTPARSLE-EFNDVYLVTH--LMGADLN-----------------NIVKCQKLTDD 125
Query: 387 ----IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
+ + L Y+H H DLKPSN+ ++E+ + D GLAR H
Sbjct: 126 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDD 177
Query: 443 SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELI 481
G + Y APE L + D++S G +M EL+
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
+ + +IG G+FG V R +K+ + R+ +F E R + + +
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 327 R-NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
+V++F A +Q + + +V E+M G L VN D + R
Sbjct: 128 SPWVVQLFYA-----FQDDRYLYMVMEYMPGGDL------VNLMSNYDVPEK----WARF 172
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
A +V ALD +H H D+KP N+LLD+ + DFG + +
Sbjct: 173 YTA-EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228
Query: 446 GVKGSIGYIAPE----YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
V G+ YI+PE G D +S G+ + E+++ P
Sbjct: 229 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
+ + +IG G+FG V R +K+ + R+ +F E R + + +
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 327 R-NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
+V++F A +Q + + +V E+M G L VN D + R
Sbjct: 133 SPWVVQLFYA-----FQDDRYLYMVMEYMPGGDL------VNLMSNYDVPEK----WARF 177
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
A +V ALD +H H D+KP N+LLD+ + DFG + +
Sbjct: 178 YTA-EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 446 GVKGSIGYIAPE----YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
V G+ YI+PE G D +S G+ + E+++ P
Sbjct: 234 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 103/251 (41%), Gaps = 51/251 (20%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRA-----SRSFIAECRALRSIRHRNLVKV 332
IG GS+G V + ++ R +K+ N + R E R ++ + H N+ ++
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWL----------------------YPVNRED 370
+ Y+ + LV E G L + L P E+
Sbjct: 94 YEV-----YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 371 EVDKA----PRNLNLLQRL----NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM 422
++ + +L+ +QR NI + SAL YLH+ Q I H D+KP N L
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN--QGI-CHRDIKPENFLFSTNK 205
Query: 423 VSHVG--DFGLAR-FLPPTHVQTSSIGVK-GSIGYIAPEYGLGSEVSTNG---DVYSYGI 475
+ DFGL++ F + + + K G+ ++APE L + + G D +S G+
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEV-LNTTNESYGPKCDAWSAGV 264
Query: 476 LMLELIIRKKP 486
L+ L++ P
Sbjct: 265 LLHLLLMGAVP 275
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 46/230 (20%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFNLHHHRASRSF---IAECRALRSIR 325
F L+G G+FG V +L + + T +K+ A + E R L++ R
Sbjct: 12 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H F +Q +D V E+ G L + ++RE R + +
Sbjct: 69 H-----PFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE-------RVFSEDRAR 113
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
++ SALDYLH + + + DLK N++LD++ + DFGL +
Sbjct: 114 FYGAEIVSALDYLHSEKNVV--YRDLKLENLMLDKDGHIKITDFGLCK-----------E 160
Query: 446 GVK---------GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+K G+ Y+APE ++ D + G++M E++ + P
Sbjct: 161 GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 46/230 (20%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFNLHHHRASRSF---IAECRALRSIR 325
F L+G G+FG V +L + + T +K+ A + E R L++ R
Sbjct: 10 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H F +Q +D V E+ G L + ++RE R + +
Sbjct: 67 H-----PFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE-------RVFSEDRAR 111
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
++ SALDYLH + + + DLK N++LD++ + DFGL +
Sbjct: 112 FYGAEIVSALDYLHSEKNVV--YRDLKLENLMLDKDGHIKITDFGLCK-----------E 158
Query: 446 GVK---------GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+K G+ Y+APE ++ D + G++M E++ + P
Sbjct: 159 GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 46/230 (20%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTT---VTVKVFNLHHHRASRSF---IAECRALRSIR 325
F L+G G+FG V +L + + T +K+ A + E R L++ R
Sbjct: 11 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H F +Q +D V E+ G L + ++RE R + +
Sbjct: 68 H-----PFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE-------RVFSEDRAR 112
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
++ SALDYLH + + + DLK N++LD++ + DFGL +
Sbjct: 113 FYGAEIVSALDYLHSEKNVV--YRDLKLENLMLDKDGHIKITDFGLCK-----------E 159
Query: 446 GVK---------GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+K G+ Y+APE ++ D + G++M E++ + P
Sbjct: 160 GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 32/219 (14%)
Query: 277 LIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTAC 336
++G G++G VY G + + +K R S+ E + ++H+N+V+ +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
S N F + E + GSL L ++ + + + + + L
Sbjct: 75 S-----ENGFIKIFMEQVPGGSLSALL--RSKWGPLKDNEQTIGFYTK-----QILEGLK 122
Query: 397 YLHHDCQPITTHCDLKPSNILLDE-EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
YL HD Q + H D+K N+L++ V + DFG ++ L + T + G++ Y+A
Sbjct: 123 YL-HDNQIV--HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMA 177
Query: 456 PE--------YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
PE YG + D++S G ++E+ K P
Sbjct: 178 PEIIDKGPRGYGKAA------DIWSLGCTIIEMATGKPP 210
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 32/219 (14%)
Query: 277 LIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTAC 336
++G G++G VY G + + +K R S+ E + ++H+N+V+ +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS- 87
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
+ N F + E + GSL L P N + L
Sbjct: 88 ----FSENGFIKIFMEQVPGGSLSALL-------RSKWGPLKDNEQTIGFYTKQILEGLK 136
Query: 397 YLHHDCQPITTHCDLKPSNILLDE-EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIA 455
YL HD Q + H D+K N+L++ V + DFG ++ L + T + G++ Y+A
Sbjct: 137 YL-HDNQIV--HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMA 191
Query: 456 PE--------YGLGSEVSTNGDVYSYGILMLELIIRKKP 486
PE YG + D++S G ++E+ K P
Sbjct: 192 PEIIDKGPRGYGKAA------DIWSLGCTIIEMATGKPP 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 93/230 (40%), Gaps = 39/230 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G GSFG V++ + VK L RA + C L S R +V ++ A
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEE--LMACAGLTSPR---IVPLYGA-- 153
Query: 338 GVDYQGNDFKALVYEFMQNGSL-----EEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
+ + + E ++ GSL E+ P +R L L A++
Sbjct: 154 ---VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR------------ALYYLGQALE-- 196
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG--DFGLARFLPPTHVQTSSIG---V 447
L+YLH H D+K N+LL + SH DFG A L P + S + +
Sbjct: 197 -GLEYLHSR---RILHGDVKADNVLLSSDG-SHAALCDFGHAVCLQPDGLGKSLLTGDYI 251
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNL 497
G+ ++APE LG DV+S +ML ++ P F G + L
Sbjct: 252 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL 301
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 103/258 (39%), Gaps = 32/258 (12%)
Query: 269 TDGFSSANLIGTGSFGSV---YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR 325
+D + +G+G++G V + R +K ++ S + + E L+ +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRL 385
H N++K++ ++ LV E + G L + + + EVD A
Sbjct: 63 HPNIMKLYEF-----FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV--------- 108
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSHVGDFGLARFLPPTHVQT 442
I V S YLH + H DLKP N+LL+ + + + DFGL+
Sbjct: 109 -IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK 164
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
+ G+ YIAPE L + DV+S G+++ L+ P F G + R
Sbjct: 165 ERL---GTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP----FGGQTDQEILKR 216
Query: 503 MALPDHVMDIVDSTLLND 520
+ D D T ++D
Sbjct: 217 VEKGKFSFDPPDWTQVSD 234
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 43/228 (18%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--------RSFIAECRALRS 323
F L+G G+FG V +L R T + + + R + E R L++
Sbjct: 12 FDYLKLLGKGTFGKV---IL--VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
RH L + A +Q +D V E+ G L + ++RE R +
Sbjct: 67 TRHPFLTALKYA-----FQTHDRLCFVMEYANGGEL---FFHLSRE-------RVFTEER 111
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
++ SAL+YLH + D+K N++LD++ + DFGL + +
Sbjct: 112 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGI 161
Query: 444 SIGVK-----GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
S G G+ Y+APE ++ D + G++M E++ + P
Sbjct: 162 SDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 108/283 (38%), Gaps = 35/283 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLV---KVFT 334
+G G++G VYK +G+ + + S S E LR ++H N++ KVF
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 335 ACSG------VDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
+ + DY +D ++ +R + +K P L ++
Sbjct: 89 SHADRKVWLLFDYAEHDLWHII--------------KFHRASKANKKPVQLPRGMVKSLL 134
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILL----DEEMVSHVGDFGLAR-FLPPTHVQTS 443
+ + YLH + H DLKP+NIL+ E + D G AR F P
Sbjct: 135 YQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNG-DVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502
V + Y APE LG+ T D+++ G + EL+ +P + D+ N
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-SEPIFHCRQEDIKTSNPYH 250
Query: 503 MALPDHVMDIVDSTLLNDVEDLAIISNQR--QRQIRVNNIIEC 543
D + +++ D ED+ + + R N C
Sbjct: 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNC 293
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 43/228 (18%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--------RSFIAECRALRS 323
F L+G G+FG V +L R T + + + R + E R L++
Sbjct: 7 FDYLKLLGKGTFGKV---IL--VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
RH L + A +Q +D V E+ G L + ++RE R +
Sbjct: 62 TRHPFLTALKYA-----FQTHDRLCFVMEYANGGEL---FFHLSRE-------RVFTEER 106
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
++ SAL+YLH + D+K N++LD++ + DFGL + +
Sbjct: 107 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGI 156
Query: 444 SIGVK-----GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
S G G+ Y+APE ++ D + G++M E++ + P
Sbjct: 157 SDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 43/228 (18%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--------RSFIAECRALRS 323
F L+G G+FG V +L R T + + + R + E R L++
Sbjct: 7 FDYLKLLGKGTFGKV---IL--VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
RH L + A +Q +D V E+ G L + ++RE R +
Sbjct: 62 TRHPFLTALKYA-----FQTHDRLCFVMEYANGGEL---FFHLSRE-------RVFTEER 106
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
++ SAL+YLH + D+K N++LD++ + DFGL + +
Sbjct: 107 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGI 156
Query: 444 SIGVK-----GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
S G G+ Y+APE ++ D + G++M E++ + P
Sbjct: 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSSIGVK 448
ALDY H Q I H D+KP N+++D E+ + D+GLA F P +V+ +S K
Sbjct: 137 KALDYCH--SQGIM-HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 193
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
G PE + + + D++S G + +I RK+P F G N ++A
Sbjct: 194 G------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 241
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSSIGVK 448
ALDY H Q I H D+KP N+++D E+ + D+GLA F P +V+ +S K
Sbjct: 136 KALDYCH--SQGIM-HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 192
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
G PE + + + D++S G + +I RK+P F G N ++A
Sbjct: 193 G------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 240
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 21/188 (11%)
Query: 275 ANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLVKVF 333
++++G G+ +V++G + +KVFN + R + E L+ + H+N+VK+F
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
+ K L+ EF GS LY V E P N L I +
Sbjct: 74 AIEEETTTR---HKVLIMEFCPCGS----LYTVLEE------PSNAYGLPESEFLIVLRD 120
Query: 394 ALDYLHHDCQPITTHCDLKPSNILL----DEEMVSHVGDFGLARFLPPTHVQTSSIGVKG 449
+ ++H + H ++KP NI+ D + V + DFG AR L + + G
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED---DEQFVXLYG 177
Query: 450 SIGYIAPE 457
+ Y+ P+
Sbjct: 178 TEEYLHPD 185
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSSIGVK 448
ALDY H Q I H D+KP N+++D E+ + D+GLA F P +V+ +S K
Sbjct: 137 KALDYCH--SQGIM-HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 193
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
G PE + + + D++S G + +I RK+P F G N ++A
Sbjct: 194 G------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 241
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSSI 445
++ ALDY H Q I H D+KP N+++D E+ + D+GLA F P +V+ +S
Sbjct: 135 ELLKALDYCH--SQGIM-HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 191
Query: 446 GVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
KG PE + + + D++S G + +I RK+P F G N ++A
Sbjct: 192 YFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 242
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 59/145 (40%), Gaps = 12/145 (8%)
Query: 39 SSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRN-QFRGSFPTEVGNLINLET 97
+S C +LT + L +N L+G GLT L LDLS N Q R PT L +L T
Sbjct: 49 ASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHT 108
Query: 98 LTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQG-----------LTILDLSRNKLSGEI 146
L + LQ P L+ L +Q N Q LT L L N++
Sbjct: 109 LHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVP 168
Query: 147 PEFLVGLKVIENLNLSYNDLEGMVP 171
GL ++ L L N + + P
Sbjct: 169 EHAFRGLHSLDRLLLHQNHVARVHP 193
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 3/182 (1%)
Query: 554 AQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEI-PSEIGRLRRLQVPDLNN 612
+ +TIL L S LAG L+ L+ L+L +N+ + P+ L L L+
Sbjct: 54 CRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDR 113
Query: 613 NSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPP-PL 671
+ P + L + L N L + F L + L L N I S+P
Sbjct: 114 CGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFL-HGNRIPSVPEHAF 172
Query: 672 GNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVG 731
L SL ++ L N++A P L L+ LYL N LS + + + S+ +
Sbjct: 173 RGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLN 232
Query: 732 EN 733
+N
Sbjct: 233 DN 234
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Query: 586 LENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKN-QLMGKIP 644
L N ++ + R L + L++N++ G + + L ++ L+ N QL P
Sbjct: 38 LHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDP 97
Query: 645 SDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVIL 704
+ F L + L L L P L++L+ + L NNL T L NL L
Sbjct: 98 TTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHL 157
Query: 705 YLGVNRLSGIVPSSIFNISSIAEFDVGENKI 735
+L NR+ + + + S+ + +N +
Sbjct: 158 FLHGNRIPSVPEHAFRGLHSLDRLLLHQNHV 188
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 670 PLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFD 729
P G +S ++I L N ++ + +NL IL+L N L+GI ++ ++ + + D
Sbjct: 26 PTGIPASSQRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLD 85
Query: 730 VGEN 733
+ +N
Sbjct: 86 LSDN 89
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSSIGVK 448
ALDY H Q I H D+KP N+++D E+ + D+GLA F P +V+ +S K
Sbjct: 136 KALDYCH--SQGIM-HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 192
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
G PE + + + D++S G + +I RK+P F G N ++A
Sbjct: 193 G------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 240
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSSIGVK 448
ALDY H Q I H D+KP N+++D E+ + D+GLA F P +V+ +S K
Sbjct: 136 KALDYCH--SQGIM-HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 192
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
G PE + + + D++S G + +I RK+P F G N ++A
Sbjct: 193 G------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 240
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 43/228 (18%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--------RSFIAECRALRS 323
F L+G G+FG V +L R T + + + R + E R L++
Sbjct: 7 FDYLKLLGKGTFGKV---IL--VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
RH L + A +Q +D V E+ G L + ++RE R +
Sbjct: 62 TRHPFLTALKYA-----FQTHDRLCFVMEYANGGEL---FFHLSRE-------RVFTEER 106
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
++ SAL+YLH + D+K N++LD++ + DFGL + +
Sbjct: 107 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGI 156
Query: 444 SIGVK-----GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
S G G+ Y+APE ++ D + G++M E++ + P
Sbjct: 157 SDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSSIGVK 448
ALDY H Q I H D+KP N+++D E+ + D+GLA F P +V+ +S K
Sbjct: 136 KALDYCH--SQGIM-HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 192
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
G PE + + + D++S G + +I RK+P F G N ++A
Sbjct: 193 G------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 240
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSSIGVK 448
ALDY H Q I H D+KP N+++D E+ + D+GLA F P +V+ +S K
Sbjct: 136 KALDYCH--SQGIM-HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 192
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
G PE + + + D++S G + +I RK+P F G N ++A
Sbjct: 193 G------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 240
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSSIGVK 448
ALDY H Q I H D+KP N+++D E+ + D+GLA F P +V+ +S K
Sbjct: 136 KALDYCH--SQGIM-HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 192
Query: 449 GSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
G PE + + + D++S G + +I RK+P F G N ++A
Sbjct: 193 G------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 240
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 43/228 (18%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--------RSFIAECRALRS 323
F L+G G+FG V +L R T + + + R + E R L++
Sbjct: 7 FDYLKLLGKGTFGKV---IL--VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
RH L + A +Q +D V E+ G L + ++RE R +
Sbjct: 62 TRHPFLTALKYA-----FQTHDRLCFVMEYANGGEL---FFHLSRE-------RVFTEER 106
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
++ SAL+YLH + D+K N++LD++ + DFGL + +
Sbjct: 107 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGI 156
Query: 444 SIGVK-----GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
S G G+ Y+APE ++ D + G++M E++ + P
Sbjct: 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 43/228 (18%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--------RSFIAECRALRS 323
F L+G G+FG V +L R T + + + R + E R L++
Sbjct: 7 FDYLKLLGKGTFGKV---IL--VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
RH L + A +Q +D V E+ G L + ++RE R +
Sbjct: 62 TRHPFLTALKYA-----FQTHDRLCFVMEYANGGEL---FFHLSRE-------RVFTEER 106
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
++ SAL+YLH + D+K N++LD++ + DFGL + +
Sbjct: 107 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGI 156
Query: 444 SIGVK-----GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
S G G+ Y+APE ++ D + G++M E++ + P
Sbjct: 157 SDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 27/213 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR-HRNLVKVFTAC 336
+G GSF K V + VK+ + R + E AL+ H N+VK+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIIS---KRMEANTQKEITALKLCEGHPNIVKLHEV- 74
Query: 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALD 396
+ LV E + G L E + K ++ + + I + SA+
Sbjct: 75 ----FHDQLHTFLVMELLNGGELFERI----------KKKKHFSETEASYIMRKLVSAVS 120
Query: 397 YLHHDCQPITTHCDLKPSNILLDEE---MVSHVGDFGLARFLPPTHVQTSSIGVKGSIGY 453
++H H DLKP N+L +E + + DFG AR PP + + ++ Y
Sbjct: 121 HMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHY 175
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
APE + + D++S G+++ ++ + P
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS-HVGDFGLARFLPP---THVQTSSI 445
++ ALDY H Q I H D+KP N+++D E+ + D+GLA F P +V+ +S
Sbjct: 154 ELLKALDYCH--SQGIM-HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 210
Query: 446 GVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504
KG PE + + + D++S G + +I RK+P F G N ++A
Sbjct: 211 YFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVKIA 261
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 43/228 (18%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRAS--------RSFIAECRALRS 323
F L+G G+FG V +L R T + + + R + E R L++
Sbjct: 10 FDYLKLLGKGTFGKV---IL--VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
RH L + A +Q +D V E+ G L + ++RE R +
Sbjct: 65 TRHPFLTALKYA-----FQTHDRLCFVMEYANGGEL---FFHLSRE-------RVFTEER 109
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTS 443
++ SAL+YLH + D+K N++LD++ + DFGL + +
Sbjct: 110 ARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGI 159
Query: 444 SIGVK-----GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
S G G+ Y+APE ++ D + G++M E++ + P
Sbjct: 160 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQT 442
Q + A +++ L +LH + + DLK N++LD E + DFG+ + V T
Sbjct: 121 QAVFYAAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTT 177
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSD 488
G+ YIAPE + D ++YG+L+ E++ + P D
Sbjct: 178 REFC--GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 21/188 (11%)
Query: 275 ANLIGTGSFGSVYKGVLDEGRTTVTVKVFN-LHHHRASRSFIAECRALRSIRHRNLVKVF 333
++++G G+ +V++G + +KVFN + R + E L+ + H+N+VK+F
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVAS 393
+ K L+ EF GS LY V E P N L I +
Sbjct: 74 AIEEETTTR---HKVLIMEFCPCGS----LYTVLEE------PSNAYGLPESEFLIVLRD 120
Query: 394 ALDYLHHDCQPITTHCDLKPSNILL----DEEMVSHVGDFGLARFLPPTHVQTSSIGVKG 449
+ ++H + H ++KP NI+ D + V + DFG AR L + + G
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED---DEQFVSLYG 177
Query: 450 SIGYIAPE 457
+ Y+ P+
Sbjct: 178 TEEYLHPD 185
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 37/227 (16%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRAL-RSIRHR 327
TDG+ IG GS+ + + VK+ + ++ R E L R +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIID----KSKRDPTEEIEILLRYGQHP 76
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N++ + Y + +V E M+ G L +DK R +R
Sbjct: 77 NIITLKDV-----YDDGKYVYVVTELMKGGEL------------LDKILRQKFFSEREAS 119
Query: 388 AI--DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS----HVGDFGLARFLPPTH-- 439
A+ + ++YLH Q + H DLKPSNIL +E + + DFG A+ L +
Sbjct: 120 AVLFTITKTVEYLH--AQGVV-HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ T + ++APE D++S G+L+ ++ P
Sbjct: 177 LMTPCY----TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 47/168 (27%)
Query: 628 NLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLS------SLRKIS 681
NLI + L NQ+ P +L+KI L L N PL N+S S++ +
Sbjct: 64 NLIGLELKDNQITDLAP--LKNLTKITELELSGN--------PLKNVSAIAGLQSIKTLD 113
Query: 682 LAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPL 741
L + P L+ L NL +LYL +N+++ I P + G
Sbjct: 114 LTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP------------------LAG---- 149
Query: 742 DYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789
L NLQY SIG +++ P ++N SKL +A +NK++ P
Sbjct: 150 -----LTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP 190
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 386 NIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSI 445
I + AL++L + + I H D+KPSNILLD + DFG++ L + +T
Sbjct: 129 KITLATVKALNHLKENLKII--HRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA 186
Query: 446 GVKGSIGYIAPEYGLGSEVSTNG-----DVYSYGILMLELIIRKKP 486
G + Y+APE + S G DV+S GI + EL + P
Sbjct: 187 GCR---PYMAPE-RIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 31/195 (15%)
Query: 274 SANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIR-HRNLVK 331
++ L+G G++ V V + VK+ H SR F E L + ++N+++
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVF-REVETLYQCQGNKNILE 75
Query: 332 VFTACSGVDYQGNDFK-ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAID 390
+ +++ +D + LV+E +Q GS+ L + ++ ++ N + + D
Sbjct: 76 L------IEFFEDDTRFYLVFEKLQGGSI---LAHIQKQ-------KHFNEREASRVVRD 119
Query: 391 VASALDYLHHDCQPITTHCDLKPSNILLDE-EMVSHVG--DFGLARFLP----PTHVQTS 443
VA+ALD+LH H DLKP NIL + E VS V DF L + T + T
Sbjct: 120 VAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTP 176
Query: 444 SIGVK-GSIGYIAPE 457
+ GS Y+APE
Sbjct: 177 ELTTPCGSAEYMAPE 191
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 88/229 (38%), Gaps = 47/229 (20%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI-RHRNLV 330
F L+G G++G VYKG + +KV ++ E L+ HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIA 84
Query: 331 KVFTACSGVDYQGNDFK-ALVYEFMQNGSL-------------EEWLYPVNREDEVDKAP 376
+ A + G D + LV EF GS+ EEW+ + RE
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICRE------- 137
Query: 377 RNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP 436
+ L +LH Q H D+K N+LL E + DFG++ L
Sbjct: 138 --------------ILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180
Query: 437 PTHVQTSSIGVKGSIGYIAPEYGLGSE-----VSTNGDVYSYGILMLEL 480
T + ++ G+ ++APE E D++S GI +E+
Sbjct: 181 RTVGRRNTF--IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 407 THCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG-VKGSIGYIAPEYGLGSEVS 465
TH D+KP NIL+ + +++ DFG+A T + + +G G++ Y APE S +
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASAT--TDEKLTQLGNTVGTLYYXAPERFSESHAT 213
Query: 466 TNGDVYSYGILMLELIIRKKPSDIMFEGDM 495
D+Y+ ++ E + P ++GD
Sbjct: 214 YRADIYALTCVLYECLTGSPP----YQGDQ 239
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 109/270 (40%), Gaps = 48/270 (17%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA--ECRALRSIRHR 327
+ + A +G G FG V++ V + T K + + + + E L RHR
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV---KGTDQVLVKKEISILNIARHR 61
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387
N++ + + ++ + +++EF+ + E ++ + LN + ++
Sbjct: 62 NILHLHES-----FESMEELVMIFEFISGLDIFE---------RINTSAFELNEREIVSY 107
Query: 388 AIDVASALDYLH-HDCQPITTHCDLKPSNILLDEEMVSHVG--DFGLARFLPPTHVQTSS 444
V AL +LH H+ H D++P NI+ S + +FG AR L P
Sbjct: 108 VHQVCEALQFLHSHNI----GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP------- 156
Query: 445 IGVKGSIGYIAPEY-----GLGSEVSTNGDVYSYGILMLELIIRKKP-----SDIMFEGD 494
G + + APEY VST D++S G L+ L+ P + + E
Sbjct: 157 -GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI 215
Query: 495 MNL-HNFARMALPD---HVMDIVDSTLLND 520
MN + F A + MD VD L+ +
Sbjct: 216 MNAEYTFDEEAFKEISIEAMDFVDRLLVKE 245
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTH 408
LV+E M+ GS+ L +++ R+ N L+ + DVASALD+LH+ H
Sbjct: 88 LVFEKMRGGSI---LSHIHKR-------RHFNELEASVVVQDVASALDFLHNK---GIAH 134
Query: 409 CDLKPSNILLDE-EMVSHVG--DFGLARFLP----PTHVQTSSIGVK-GSIGYIAPEY-- 458
DLKP NIL + VS V DFGL + + + T + GS Y+APE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 459 GLGSEVS---TNGDVYSYGILMLELI 481
E S D++S G+++ L+
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILL 220
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 39/230 (16%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G GSFG V++ + VK L RA + C L S R +V ++ A
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEE--LMACAGLTSPR---IVPLYGA-- 134
Query: 338 GVDYQGNDFKALVYEFMQNGSL-----EEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVA 392
+ + + E ++ GSL E+ P +R L L A++
Sbjct: 135 ---VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR------------ALYYLGQALE-- 177
Query: 393 SALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG--DFGLARFLPPTHVQTSSIG---V 447
L+YLH H D+K N+LL + SH DFG A L P + + +
Sbjct: 178 -GLEYLHSR---RILHGDVKADNVLLSSDG-SHAALCDFGHAVCLQPDGLGKDLLTGDYI 232
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNL 497
G+ ++APE LG DV+S +ML ++ P F G + L
Sbjct: 233 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL 282
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 35/223 (15%)
Query: 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA-----ECRALRSIRH 326
F ++G+G+F V+ L + R +T K+F L + S +F E L+ I+H
Sbjct: 11 FIFMEVLGSGAFSEVF---LVKQR--LTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+V + Y+ LV + + G L + + E D + L + Q
Sbjct: 66 ENIVTLEDI-----YESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS---LVIQQ--- 114
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVSHVGDFGLARFLPPTHVQTS 443
V SA+ YLH + H DLKP N+L +E + DFGL++ + T+
Sbjct: 115 ----VLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA 167
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G+ GY+APE S D +S G++ L+ P
Sbjct: 168 C----GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG--V 447
D AL +LH H D+KP+NI L +GDFGL + T+ G
Sbjct: 165 DTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLL-----VELGTAGAGEVQ 216
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
+G Y+APE GS T DV+S G+ +LE+
Sbjct: 217 EGDPRYMAPELLQGS-YGTAADVFSLGLTILEV 248
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 369 EDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL-----DEEMV 423
ED D R L L IAI + S ++Y+H + D+KP N L+ +E V
Sbjct: 84 EDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKN---LIYRDVKPENFLIGRQGNKKEHV 140
Query: 424 SHVGDFGLAR-FLPP---THV-QTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILML 478
H+ DFGLA+ ++ P H+ + G+ Y++ LG E S D+ + G + +
Sbjct: 141 IHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFM 200
Query: 479 ELI 481
+
Sbjct: 201 YFL 203
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH 326
T+ + +G G+F V + V + N R + E R R ++H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386
N+V++ + S +G+ + L+++ + G L E + E D + + +Q++
Sbjct: 70 PNIVRLHDSISE---EGHHY--LIFDLVTGGELFEDIVAREYYSEADAS----HCIQQI- 119
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM---VSHVGDFGLARFLPPTHVQTS 443
L+ + H Q H +LKP N+LL ++ + DFGLA + Q +
Sbjct: 120 --------LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQA 169
Query: 444 SIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
G G+ GY++PE D+++ G+++ L++ P
Sbjct: 170 WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 625 SCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAI 684
CS R L + +P G ++ +L LG N + + L ++ L
Sbjct: 8 ECSAQDRAVLCHRKRFVAVPE--GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNE 65
Query: 685 NNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFN-ISSIAEFDVGENKIQGNIPLDY 743
N ++ P + L NL L L NRL ++P +F +S++ + D+ ENKI I LDY
Sbjct: 66 NIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIV--ILLDY 122
Query: 744 GFT-LQNLQYFSIGTNRITGAIPPSISNASKLE 775
F L NL+ +G N + + S + LE
Sbjct: 123 MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE 155
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 74 LDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGN------ 127
LDL +N+ + E + +LE L ++ NI+ P + L L ++ N
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 96
Query: 128 --VFQG---LTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDL 166
VF G LT LD+S NK+ + L +++L + NDL
Sbjct: 97 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 140
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 627 SNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINN 686
SNL ++ +++N+++ + F L ++ L +G N+L+ L+SL +++L N
Sbjct: 104 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 163
Query: 687 LAGSIPFTLSKLKNLVILYL 706
L LS L L++L L
Sbjct: 164 LTSIPTEALSHLHGLIVLRL 183
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 29/216 (13%)
Query: 272 FSSANLIGTGSFGSV---YKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRN 328
+ +G+G++G V V R ++ ++ S+ + E L+ + H N
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK-LLEEVAVLKLLDHPN 97
Query: 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIA 388
++K++ ++ LV E + G L + + + +EVD A I
Sbjct: 98 IMKLYDF-----FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV----------II 142
Query: 389 IDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVSHVGDFGLARFLPPTHVQTSSI 445
V S + YLH + H DLKP N+LL +++ + + DFGL+ +
Sbjct: 143 KQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL 199
Query: 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELI 481
G+ YIAPE L + DV+S G+++ L+
Sbjct: 200 ---GTAYYIAPEV-LRKKYDEKCDVWSIGVILFILL 231
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 40/225 (17%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-----FNLHHHRASRSFI---AECRAL 321
D + + +G+G+ G V + V +K+ F + R + + E L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ + H ++K+ DY +V E M+ G L + + R + +A L
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKVVGNKR---LKEATCKLYF 120
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVSHVGDFGLARFLPPT 438
Q L A+ YLH + H DLKP N+LL +E+ + + DFG ++ L T
Sbjct: 121 YQML-------LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 439 HVQTSSIGVKGSIGYIAPEYGLGSEVSTNG-----DVYSYGILML 478
+ + + G+ Y+APE + V T G D +S G+++
Sbjct: 171 SLMRT---LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 210
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 40/225 (17%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-----FNLHHHRASRSFI---AECRAL 321
D + + +G+G+ G V + V +K+ F + R + + E L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ + H ++K+ DY +V E M+ G L + + R + +A L
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKVVGNKR---LKEATCKLYF 120
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVSHVGDFGLARFLPPT 438
Q L A+ YLH + H DLKP N+LL +E+ + + DFG ++ L T
Sbjct: 121 YQML-------LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 439 HVQTSSIGVKGSIGYIAPEYGLGSEVSTNG-----DVYSYGILML 478
+ + + G+ Y+APE + V T G D +S G+++
Sbjct: 171 SLMRT---LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 210
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 40/225 (17%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-----FNLHHHRASRSFI---AECRAL 321
D + + +G+G+ G V + V +K+ F + R + + E L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ + H ++K+ DY +V E M+ G L + + R + +A L
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKVVGNKR---LKEATCKLYF 120
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVSHVGDFGLARFLPPT 438
Q L A+ YLH + H DLKP N+LL +E+ + + DFG ++ L T
Sbjct: 121 YQML-------LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 439 HVQTSSIGVKGSIGYIAPEYGLGSEVSTNG-----DVYSYGILML 478
+ + + G+ Y+APE + V T G D +S G+++
Sbjct: 171 SLMRT---LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 210
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 697 KLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIG 756
+L +LV L L N+L+GI P++ S I E +GENKI+ I L L+ ++
Sbjct: 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTLNLY 110
Query: 757 TNRITGAIPPSISNASKL 774
N+I+ +P S + + L
Sbjct: 111 DNQISCVMPGSFEHLNSL 128
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 79/209 (37%), Gaps = 22/209 (10%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
D + +G+G+FG V++ V K N + + E + + H L
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAI 389
+ + A ++ L+ EF+ G L D + ++ + +N
Sbjct: 111 INLHDA-----FEDKYEMVLILEFLSGGELF---------DRIAAEDYKMSEAEVINYMR 156
Query: 390 DVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG--DFGLARFLPPTHVQTSSIGV 447
L ++H H D+KP NI+ + + S V DFGLA L P + +
Sbjct: 157 QACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT-- 211
Query: 448 KGSIGYIAPEYGLGSEVSTNGDVYSYGIL 476
+ + APE V D+++ G+L
Sbjct: 212 -ATAEFAAPEIVDREPVGFYTDMWAIGVL 239
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 40/225 (17%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-----FNLHHHRASRSFI---AECRAL 321
D + + +G+G+ G V + V +K+ F + R + + E L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ + H ++K+ DY +V E M+ G L + + R + +A L
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKVVGNKR---LKEATCKLYF 119
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVSHVGDFGLARFLPPT 438
Q L A+ YLH + H DLKP N+LL +E+ + + DFG ++ L T
Sbjct: 120 YQML-------LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
Query: 439 HVQTSSIGVKGSIGYIAPEYGLGSEVSTNG-----DVYSYGILML 478
+ + + G+ Y+APE + V T G D +S G+++
Sbjct: 170 SLMRT---LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 209
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 40/225 (17%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKV-----FNLHHHRASRSFI---AECRAL 321
D + + +G+G+ G V + V +K+ F + R + + E L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 322 RSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNL 381
+ + H ++K+ DY +V E M+ G L + + R + +A L
Sbjct: 76 KKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKVVGNKR---LKEATCKLYF 126
Query: 382 LQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVSHVGDFGLARFLPPT 438
Q L A+ YLH + H DLKP N+LL +E+ + + DFG ++ L T
Sbjct: 127 YQML-------LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 176
Query: 439 HVQTSSIGVKGSIGYIAPEYGLGSEVSTNG-----DVYSYGILML 478
+ + + G+ Y+APE + V T G D +S G+++
Sbjct: 177 SLMRT---LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 216
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 86/227 (37%), Gaps = 37/227 (16%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRAL-RSIRHR 327
+DG+ IG GS+ + V VKV + ++ R E L R +H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID----KSKRDPSEEIEILLRYGQHP 81
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN- 386
N++ + Y LV E M+ G L +DK R +R
Sbjct: 82 NIITLKDV-----YDDGKHVYLVTELMRGGEL------------LDKILRQKFFSEREAS 124
Query: 387 -IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM----VSHVGDFGLARFLPPTH-- 439
+ + ++YLH H DLKPSNIL +E + DFG A+ L +
Sbjct: 125 FVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ T + ++APE D++S GIL+ ++ P
Sbjct: 182 LMTPCY----TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 406 TTHCDLKPSNILLDE-EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV 464
H D+KP N+L++E + + DFG A+ L P+ + I S Y APE G++
Sbjct: 152 VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYI---CSRYYRAPELIFGNQH 208
Query: 465 STNG-DVYSYGILMLELIIRKKPSDIMFEGDMN---LHNFARM 503
T D++S G + E+++ + +F GD + LH R+
Sbjct: 209 YTTAVDIWSVGCIFAEMML----GEPIFRGDNSAGQLHEIVRV 247
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 86/227 (37%), Gaps = 37/227 (16%)
Query: 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRAL-RSIRHR 327
+DG+ IG GS+ + V VKV + ++ R E L R +H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID----KSKRDPSEEIEILLRYGQHP 81
Query: 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN- 386
N++ + Y LV E M+ G L +DK R +R
Sbjct: 82 NIITLKDV-----YDDGKHVYLVTELMRGGEL------------LDKILRQKFFSEREAS 124
Query: 387 -IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM----VSHVGDFGLARFLPPTH-- 439
+ + ++YLH H DLKPSNIL +E + DFG A+ L +
Sbjct: 125 FVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
Query: 440 VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486
+ T + ++APE D++S GIL+ ++ P
Sbjct: 182 LMTPCY----TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 369 EDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE-----EMV 423
ED D R +L L IAI + S ++Y+H + D+KP N L+ + V
Sbjct: 92 EDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQV 148
Query: 424 SHVGDFGLAR-FLPP---THV-QTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILML 478
H+ DFGLA+ ++ P H+ + G+ Y++ LG E S D+ + G + +
Sbjct: 149 IHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFM 208
Query: 479 ELI 481
+
Sbjct: 209 YFL 211
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 33/173 (19%)
Query: 312 RSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDE 371
R F+AE + H ++V++F D G+ +V E++ SL+
Sbjct: 130 RQFLAE------VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR---------- 173
Query: 372 VDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGL 431
+ L + + + +++ AL YLH + DLKP NI+L EE + + +
Sbjct: 174 --SKGQKLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEEQLKLIDLGAV 228
Query: 432 ARFLPPTHVQTSSIG-VKGSIGYIAPE-YGLGSEVSTNGDVYSYGILMLELII 482
+R +S G + G+ G+ APE G V+T D+Y+ G + L +
Sbjct: 229 SRI--------NSFGYLYGTPGFQAPEIVRTGPTVAT--DIYTVGRTLAALTL 271
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G GSFG V++ + VK L R + C L S R +V ++ A
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPR---IVPLYGA-- 134
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ + + E ++ GSL + + + E D+A L L A++ L+Y
Sbjct: 135 ---VREGPWVNIFMELLEGGSLGQLIKQMGCLPE-DRA------LYYLGQALE---GLEY 181
Query: 398 LHHDCQPITTHCDLKPSNILLDEE-MVSHVGDFGLARFLPPTHVQTSSIG---VKGSIGY 453
LH H D+K N+LL + + + DFG A L P + S + + G+ +
Sbjct: 182 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 238
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNL 497
+APE +G D++S +ML ++ P F G + L
Sbjct: 239 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 282
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 92/243 (37%), Gaps = 50/243 (20%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
D + +LIG GS+G VY V +K N R I R LR I N
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVN----RMFEDLIDCKRILREITILNR 83
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEW--LYPVNREDEVD-----KAPRNLNLL 382
+K +D+ +++ + L ++ LY V + D K P L
Sbjct: 84 LK------------SDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQ 131
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL------- 435
I ++ ++H + H DLKP+N LL+++ + DFGLAR +
Sbjct: 132 HVKTILYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIH 188
Query: 436 -------------PPTHVQTSSIGVKGSI---GYIAPEYGLGSEVSTNG-DVYSYGILML 478
P H + + + Y APE L E TN D++S G +
Sbjct: 189 IVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFA 248
Query: 479 ELI 481
EL+
Sbjct: 249 ELL 251
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G GSFG V++ + VK L R + C L S R +V ++ A
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPR---IVPLYGA-- 118
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ + + E ++ GSL + + + E D+A L L A++ L+Y
Sbjct: 119 ---VREGPWVNIFMELLEGGSLGQLIKQMGCLPE-DRA------LYYLGQALE---GLEY 165
Query: 398 LHHDCQPITTHCDLKPSNILLDEE-MVSHVGDFGLARFLPPTHVQTSSIG---VKGSIGY 453
LH H D+K N+LL + + + DFG A L P + S + + G+ +
Sbjct: 166 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 222
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNL 497
+APE +G D++S +ML ++ P F G + L
Sbjct: 223 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 266
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 92/245 (37%), Gaps = 52/245 (21%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLD-EGRTTVTVKVFNLHHHRASRSFIAECRALRSI---- 324
D + +LIGTGS+G V + E R K+ R I R LR I
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKIL-----RVFEDLIDCKRILREIAILN 107
Query: 325 --RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL 382
H ++VKV D + D +V E + + + PV L L
Sbjct: 108 RLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVY-----------LTEL 156
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF-------- 434
+ ++ + Y+H H DLKP+N L++++ V DFGLAR
Sbjct: 157 HIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGN 213
Query: 435 --LPPT------------HVQTSSIGVKGSI---GYIAPEYGLGSEVSTNG-DVYSYGIL 476
LP + H + + G + Y APE L E T DV+S G +
Sbjct: 214 SQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI 273
Query: 477 MLELI 481
EL+
Sbjct: 274 FAELL 278
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 91/240 (37%), Gaps = 47/240 (19%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL 329
D + +LIG GS+G VY V +K N R I R LR I N
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN----RMFEDLIDCKRILREITILNR 81
Query: 330 VKVFTACSGVDYQGNDFKALVYEFMQNGSLEEW--LYPVNREDEVD-----KAPRNLNLL 382
+K +D+ +Y+ + L ++ LY V + D K P L
Sbjct: 82 LK------------SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEE 129
Query: 383 QRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFL------- 435
I ++ +++H H DLKP+N LL+++ V DFGLAR +
Sbjct: 130 HIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTN 186
Query: 436 ----------PPTHVQTSSIGVKGSI---GYIAPEYGLGSEVSTNG-DVYSYGILMLELI 481
P H + + + Y APE L E T D++S G + EL+
Sbjct: 187 IVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 317 ECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAP 376
E L+ + H N+VK+ +D D +V+E + G + E P + D+A
Sbjct: 86 EIAILKKLDHPNVVKLVEV---LDDPNEDHLYMVFELVNQGPVME--VPTLKPLSEDQAR 140
Query: 377 RNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLP 436
D+ ++YLH+ Q I H D+KPSN+L+ E+ + DFG++
Sbjct: 141 FYFQ---------DLIKGIEYLHY--QKII-HRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 437 PTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNG---DVYSYGILMLELIIRKKPSDIMFEG 493
+ S+ G+ ++APE + +G DV++ G+ + + + P M E
Sbjct: 189 GSDALLSN--TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP--FMDER 244
Query: 494 DMNLHNFAR---MALPDH 508
M LH+ + + PD
Sbjct: 245 IMCLHSKIKSQALEFPDQ 262
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 410 DLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGD 469
DLK N++LD E + DFG+ + V T G+ YIAPE + D
Sbjct: 467 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC--GTPDYIAPEIIAYQPYGKSVD 524
Query: 470 VYSYGILMLELIIRKKPSDIMFEGD 494
+++G+L+ E++ + P FEG+
Sbjct: 525 WWAFGVLLYEMLAGQAP----FEGE 545
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 94/255 (36%), Gaps = 41/255 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA------ECRALRS 323
D + +G+G F V K K RASR ++ E LR
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
+ H N++ + Y+ L+ E + G L ++L +L+ +
Sbjct: 72 VLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL----------AQKESLSEEE 116
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNI-LLDEEM-VSHVG--DFGLARFLPPTH 439
+ + ++YLH H DLKP NI LLD+ + + H+ DFGLA H
Sbjct: 117 ATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------H 167
Query: 440 VQTSSIGVKGSIG---YIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMN 496
+ K G ++APE + D++S G++ L+ P F GD
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK 223
Query: 497 LHNFARMALPDHVMD 511
A + + D
Sbjct: 224 QETLANITAVSYDFD 238
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 410 DLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGD 469
DLK N++LD E + DFG+ + V T G+ YIAPE + D
Sbjct: 146 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC--GTPDYIAPEIIAYQPYGKSVD 203
Query: 470 VYSYGILMLELIIRKKPSDIMFEGD 494
+++G+L+ E++ + P FEG+
Sbjct: 204 WWAFGVLLYEMLAGQAP----FEGE 224
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 94/255 (36%), Gaps = 41/255 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA------ECRALRS 323
D + +G+G F V K K RASR ++ E LR
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
+ H N++ + Y+ L+ E + G L ++L +L+ +
Sbjct: 72 VLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL----------AQKESLSEEE 116
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNI-LLDEEM-VSHVG--DFGLARFLPPTH 439
+ + ++YLH H DLKP NI LLD+ + + H+ DFGLA H
Sbjct: 117 ATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------H 167
Query: 440 VQTSSIGVKGSIG---YIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMN 496
+ K G ++APE + D++S G++ L+ P F GD
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK 223
Query: 497 LHNFARMALPDHVMD 511
A + + D
Sbjct: 224 QETLANITAVSYDFD 238
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337
+G GSFG V++ + VK L R + C L S R +V ++ A
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPR---IVPLYGA-- 132
Query: 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397
+ + + E ++ GSL + + + E D+A L L A++ L+Y
Sbjct: 133 ---VREGPWVNIFMELLEGGSLGQLIKQMGCLPE-DRA------LYYLGQALE---GLEY 179
Query: 398 LHHDCQPITTHCDLKPSNILLDEE-MVSHVGDFGLARFLPPTHVQTSSIG---VKGSIGY 453
LH H D+K N+LL + + + DFG A L P + S + + G+ +
Sbjct: 180 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 236
Query: 454 IAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNL 497
+APE +G D++S +ML ++ P F G + L
Sbjct: 237 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 280
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFI----AECRALRSI- 324
D + +LIG GSFG V K + V +K+ + ++F+ E R L +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-----KNKKAFLNQAQIEVRLLELMN 108
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
+H +K + + + LV+E + LY + R +LNL ++
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-----LYDLLRNTNFRGV--SLNLTRK 161
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILL--DEEMVSHVGDFGLARFLPPTHVQT 442
A + +AL +L I HCDLKP NILL + + DFG + L Q
Sbjct: 162 F--AQQMCTALLFLATPELSII-HCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQX 218
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
S Y +PE LG D++S G +++E+
Sbjct: 219 IQ-----SRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 251
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFI----AECRALRSI- 324
D + +LIG GSFG V K + V +K+ + ++F+ E R L +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-----KNKKAFLNQAQIEVRLLELMN 108
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
+H +K + + + LV+E + LY + R +LNL ++
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-----LYDLLRNTNFRGV--SLNLTRK 161
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG--DFGLARFLPPTHVQT 442
A + +AL +L I HCDLKP NILL S + DFG + L Q
Sbjct: 162 F--AQQMCTALLFLATPELSII-HCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQX 218
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
S Y +PE LG D++S G +++E+
Sbjct: 219 IQ-----SRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 251
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 92/245 (37%), Gaps = 41/245 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA------ECRALRS 323
D + +G+G F V K K RASR ++ E LR
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
+ H N++ + Y+ L+ E + G L ++L +L+ +
Sbjct: 72 VLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL----------AQKESLSEEE 116
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNI-LLDEEM-VSHVG--DFGLARFLPPTH 439
+ + ++YLH H DLKP NI LLD+ + + H+ DFGLA H
Sbjct: 117 ATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------H 167
Query: 440 VQTSSIGVK---GSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMN 496
+ K G+ ++APE + D++S G++ L+ P F GD
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK 223
Query: 497 LHNFA 501
A
Sbjct: 224 QETLA 228
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 42/240 (17%)
Query: 271 GFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLV 330
GFS +L+ G Y +K H + E R H N++
Sbjct: 41 GFSYVDLVEGLHDGHFY-----------ALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 331 KVFTACSGVDYQGNDFKA-LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLL---QRLN 386
++ C + +G +A L+ F + G+L W +E+++ N L Q L
Sbjct: 90 RLVAYC--LRERGAKHEAWLLLPFFKRGTL--W-------NEIERLKDKGNFLTEDQILW 138
Query: 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIG 446
+ + + L+ +H H DLKP+NILL +E + D G + HV+ S
Sbjct: 139 LLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLG-SMNQACIHVEGSRQA 194
Query: 447 V--------KGSIGYIAPE-YGLGSE--VSTNGDVYSYGILMLELIIRKKPSDIMFE-GD 494
+ + +I Y APE + + S + DV+S G ++ ++ + P D++F+ GD
Sbjct: 195 LTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 91/245 (37%), Gaps = 41/245 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA------ECRALRS 323
D + +G+G F V K K RASR ++ E LR
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
+ H N++ + Y+ L+ E + G L ++L +L+ +
Sbjct: 72 VLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL----------AQKESLSEEE 116
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNI-LLDEEM-VSHVG--DFGLARFLPPTH 439
+ + ++YLH H DLKP NI LLD+ + + H+ DFGLA H
Sbjct: 117 ATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------H 167
Query: 440 VQTSSIGVKGSIG---YIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMN 496
+ K G ++APE + D++S G++ L+ P F GD
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK 223
Query: 497 LHNFA 501
A
Sbjct: 224 QETLA 228
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFI----AECRALRSI- 324
D + +LIG GSFG V K + V +K+ + ++F+ E R L +
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-----KNKKAFLNQAQIEVRLLELMN 89
Query: 325 RHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384
+H +K + + + LV+E + LY + R +LNL ++
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-----LYDLLRNTNFRGV--SLNLTRK 142
Query: 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG--DFGLARFLPPTHVQT 442
A + +AL +L I HCDLKP NILL S + DFG + L Q
Sbjct: 143 F--AQQMCTALLFLATPELSII-HCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQX 199
Query: 443 SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLEL 480
S Y +PE LG D++S G +++E+
Sbjct: 200 IQ-----SRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 232
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 26/146 (17%)
Query: 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTH 408
LV+E M+ GS+ L +++ R+ N L+ + DVASALD+LH+ H
Sbjct: 88 LVFEKMRGGSI---LSHIHKR-------RHFNELEASVVVQDVASALDFLHNK---GIAH 134
Query: 409 CDLKPSNILLDE-EMVSHVG--DFGLARFLP----PTHVQTSSIGVK-GSIGYIAPEY-- 458
DLKP NIL + VS V DF L + + + T + GS Y+APE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 459 GLGSEVS---TNGDVYSYGILMLELI 481
E S D++S G+++ L+
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILL 220
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 91/245 (37%), Gaps = 41/245 (16%)
Query: 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIA------ECRALRS 323
D + +G+G F V K K RASR ++ E LR
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383
+ H N++ + Y+ L+ E + G L ++L +L+ +
Sbjct: 72 VLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL----------AQKESLSEEE 116
Query: 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNI-LLDEEM-VSHVG--DFGLARFLPPTH 439
+ + ++YLH H DLKP NI LLD+ + + H+ DFGLA H
Sbjct: 117 ATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------H 167
Query: 440 VQTSSIGVKGSIG---YIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMN 496
+ K G ++APE + D++S G++ L+ P F GD
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP----FLGDTK 223
Query: 497 LHNFA 501
A
Sbjct: 224 QETLA 228
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 92/229 (40%), Gaps = 27/229 (11%)
Query: 581 LKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLM 640
LK+LNL N L LQV +L+ N +G N + I L KN +
Sbjct: 292 LKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIA 351
Query: 641 GKIPSDFGSLSKIEVLSLGFNNL-----IGSIPPPL--GN-LSSLRKISLAINNLAGS-- 690
F L K++ L L N L I SIP GN L +L KI+L N + S
Sbjct: 352 IIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSEN 411
Query: 691 ------IPFTLSKLKNLVILYLGVNRLSGI----VPSSIFNISSIAEFDVGENKIQ---- 736
I + L ++ +L IL L NR S PS S+ + +GEN +Q
Sbjct: 412 RLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSE---NPSLEQLFLGENMLQLAWE 468
Query: 737 GNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLT 785
+ D L +LQ + N + P S+ + L +N+LT
Sbjct: 469 TELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT 517
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,794,910
Number of Sequences: 62578
Number of extensions: 889260
Number of successful extensions: 4915
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 499
Number of HSP's that attempted gapping in prelim test: 2393
Number of HSP's gapped (non-prelim): 1612
length of query: 789
length of database: 14,973,337
effective HSP length: 107
effective length of query: 682
effective length of database: 8,277,491
effective search space: 5645248862
effective search space used: 5645248862
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)