Query 041249
Match_columns 789
No_of_seqs 512 out of 3890
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 08:28:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041249.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041249hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.6E-52 5.5E-57 502.4 29.7 183 1-188 182-379 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.2E-50 4.1E-55 486.2 30.5 480 1-789 155-721 (768)
3 3t6q_A CD180 antigen; protein- 100.0 2.8E-46 9.6E-51 437.5 33.7 454 1-787 37-562 (606)
4 3t6q_A CD180 antigen; protein- 100.0 1E-45 3.6E-50 432.7 37.4 503 2-789 17-540 (606)
5 1ziw_A TOLL-like receptor 3; i 100.0 3.1E-45 1.1E-49 434.5 39.3 231 556-787 382-624 (680)
6 3vq2_A TLR4, TOLL-like recepto 100.0 4.1E-45 1.4E-49 427.6 34.2 229 554-787 327-560 (606)
7 4gt4_A Tyrosine-protein kinase 100.0 1.9E-47 6.6E-52 404.2 11.0 268 271-578 27-307 (308)
8 1ziw_A TOLL-like receptor 3; i 100.0 2.3E-44 8E-49 427.0 38.1 211 553-764 403-625 (680)
9 4asz_A BDNF/NT-3 growth factor 100.0 3.3E-47 1.1E-51 400.7 7.6 264 270-573 13-285 (299)
10 4aoj_A High affinity nerve gro 100.0 1.3E-46 4.5E-51 401.6 11.8 267 270-576 41-318 (329)
11 3vq2_A TLR4, TOLL-like recepto 100.0 2.2E-44 7.7E-49 421.4 31.6 227 553-786 305-535 (606)
12 3omv_A RAF proto-oncogene seri 100.0 1.8E-46 6.2E-51 394.9 11.8 258 267-572 33-295 (307)
13 3j0a_A TOLL-like receptor 5; m 100.0 3E-44 1E-48 435.1 31.0 167 2-172 9-192 (844)
14 4eco_A Uncharacterized protein 100.0 1.6E-44 5.6E-49 423.3 26.4 205 574-785 371-600 (636)
15 2z63_A TOLL-like receptor 4, v 100.0 4.6E-43 1.6E-47 407.1 30.5 209 577-789 323-535 (570)
16 2z81_A CD282 antigen, TOLL-lik 100.0 3.4E-43 1.2E-47 406.4 27.3 478 2-788 10-513 (549)
17 2z7x_B TOLL-like receptor 1, v 100.0 1.4E-43 4.8E-48 406.8 23.3 452 1-787 4-483 (520)
18 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.2E-45 2.8E-49 381.2 11.7 249 269-568 31-282 (311)
19 3fpq_A Serine/threonine-protei 100.0 1.6E-44 5.4E-49 377.4 13.0 252 273-571 29-283 (290)
20 4b9d_A Serine/threonine-protei 100.0 7.4E-45 2.5E-49 388.0 10.6 252 270-571 24-277 (350)
21 4fih_A Serine/threonine-protei 100.0 2.2E-44 7.6E-49 383.7 13.8 251 270-571 74-324 (346)
22 4ecn_A Leucine-rich repeat pro 100.0 1.2E-42 4.2E-47 414.3 26.4 220 557-785 621-864 (876)
23 4ase_A Vascular endothelial gr 100.0 1.9E-44 6.3E-49 388.0 8.7 276 260-573 54-343 (353)
24 3j0a_A TOLL-like receptor 5; m 100.0 2.9E-42 9.8E-47 417.7 28.9 233 554-789 265-543 (844)
25 3hmm_A TGF-beta receptor type- 100.0 1.2E-43 4.2E-48 375.9 13.9 267 271-573 4-293 (303)
26 4g3f_A NF-kappa-beta-inducing 100.0 5.4E-44 1.9E-48 379.6 10.3 248 270-570 58-309 (336)
27 4fie_A Serine/threonine-protei 100.0 2.5E-43 8.6E-48 384.8 14.1 251 270-571 151-401 (423)
28 3hyh_A Carbon catabolite-derep 100.0 2.8E-43 9.5E-48 364.7 12.4 247 270-571 13-263 (275)
29 2z63_A TOLL-like receptor 4, v 100.0 4E-41 1.4E-45 390.8 32.0 228 553-789 280-511 (570)
30 4eco_A Uncharacterized protein 100.0 7.6E-42 2.6E-46 400.7 25.4 223 560-789 335-582 (636)
31 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1E-40 3.4E-45 386.5 33.5 224 556-787 277-512 (562)
32 4g8a_A TOLL-like receptor 4; l 100.0 8.1E-41 2.8E-45 393.0 31.2 212 573-786 365-581 (635)
33 3ubd_A Ribosomal protein S6 ki 100.0 2.9E-43 1E-47 369.6 6.9 201 269-489 23-228 (304)
34 4g31_A Eukaryotic translation 100.0 2.4E-42 8.2E-47 364.2 10.7 206 270-488 5-228 (299)
35 3v47_A TOLL-like receptor 5B a 100.0 3.7E-40 1.3E-44 371.7 28.7 190 575-765 208-412 (455)
36 4ecn_A Leucine-rich repeat pro 100.0 8E-41 2.7E-45 398.8 22.7 177 578-761 672-864 (876)
37 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-40 4.1E-45 385.0 22.5 455 21-789 5-490 (549)
38 3v47_A TOLL-like receptor 5B a 100.0 3.8E-39 1.3E-43 363.4 26.8 379 2-740 15-412 (455)
39 4b99_A Mitogen-activated prote 100.0 4.1E-40 1.4E-44 360.5 15.3 207 269-489 53-265 (398)
40 2z7x_B TOLL-like receptor 1, v 100.0 5.1E-39 1.8E-43 368.8 21.1 426 1-763 25-483 (520)
41 3v5w_A G-protein coupled recep 100.0 5.2E-39 1.8E-43 366.0 15.1 199 270-490 189-394 (689)
42 4g8a_A TOLL-like receptor 4; l 100.0 4.7E-37 1.6E-41 360.9 32.2 183 2-187 36-234 (635)
43 2qkw_B Protein kinase; three-h 100.0 2.5E-38 8.6E-43 339.6 15.9 283 258-573 27-311 (321)
44 4f9c_A Cell division cycle 7-r 100.0 2.2E-38 7.5E-43 343.1 12.8 200 267-489 18-249 (361)
45 3uto_A Twitchin; kinase, muscl 100.0 6.7E-38 2.3E-42 359.8 15.9 253 270-571 157-411 (573)
46 3uim_A Brassinosteroid insensi 100.0 8.5E-38 2.9E-42 336.3 15.6 286 256-572 16-306 (326)
47 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.7E-37 3.3E-41 353.1 25.3 147 1-153 35-194 (562)
48 1jl5_A Outer protein YOPM; leu 100.0 4.9E-36 1.7E-40 336.3 21.9 183 579-789 215-415 (454)
49 2nru_A Interleukin-1 receptor- 100.0 4E-36 1.4E-40 320.2 19.3 280 256-573 11-302 (307)
50 2id5_A Lingo-1, leucine rich r 100.0 1.1E-35 3.9E-40 337.1 24.0 150 2-167 16-165 (477)
51 1o6v_A Internalin A; bacterial 100.0 4.4E-35 1.5E-39 331.0 28.2 173 575-762 217-389 (466)
52 1jl5_A Outer protein YOPM; leu 100.0 8.4E-36 2.9E-40 334.5 21.9 185 574-789 232-433 (454)
53 3fxz_A Serine/threonine-protei 100.0 1.2E-36 4.3E-41 322.5 14.3 252 269-571 19-270 (297)
54 3s95_A LIMK-1, LIM domain kina 100.0 7.2E-37 2.5E-41 326.5 11.0 254 269-573 9-278 (310)
55 2c30_A Serine/threonine-protei 100.0 4.9E-36 1.7E-40 321.6 17.0 264 258-572 23-296 (321)
56 3bz5_A Internalin-J, INLJ; leu 100.0 2.8E-35 9.6E-40 330.5 23.4 133 7-166 28-160 (457)
57 3tki_A Serine/threonine-protei 100.0 1.5E-36 5.3E-41 325.8 11.6 254 270-571 7-262 (323)
58 3soc_A Activin receptor type-2 100.0 1.3E-36 4.3E-41 326.5 10.4 268 269-575 23-316 (322)
59 2id5_A Lingo-1, leucine rich r 100.0 7.2E-35 2.5E-39 330.5 24.9 193 575-769 172-364 (477)
60 1o6v_A Internalin A; bacterial 100.0 3.3E-34 1.1E-38 323.9 29.8 186 574-772 238-433 (466)
61 4aw2_A Serine/threonine-protei 100.0 6.8E-36 2.3E-40 332.3 14.7 213 259-489 63-283 (437)
62 3fe3_A MAP/microtubule affinit 100.0 4.7E-36 1.6E-40 322.3 11.0 250 268-571 13-265 (328)
63 1o6l_A RAC-beta serine/threoni 100.0 1.4E-35 4.7E-40 319.6 14.6 201 269-489 4-207 (337)
64 3zgw_A Maternal embryonic leuc 100.0 7.5E-36 2.6E-40 322.6 12.3 253 268-572 8-262 (347)
65 4fr4_A YANK1, serine/threonine 100.0 3.7E-35 1.3E-39 321.1 16.9 201 269-490 14-220 (384)
66 2yab_A Death-associated protei 100.0 3.9E-35 1.3E-39 319.0 15.9 254 269-572 11-274 (361)
67 1tki_A Titin; serine kinase, m 100.0 4.1E-35 1.4E-39 314.3 15.8 254 269-572 4-259 (321)
68 2psq_A Fibroblast growth facto 100.0 1.1E-35 3.6E-40 325.3 11.3 265 269-573 80-360 (370)
69 3vhe_A Vascular endothelial gr 100.0 6.3E-36 2.1E-40 326.2 8.7 278 258-573 10-351 (359)
70 1xjd_A Protein kinase C, theta 100.0 3.5E-35 1.2E-39 317.3 14.2 204 266-489 13-220 (345)
71 3cbl_A C-FES, proto-oncogene t 100.0 2.6E-36 8.9E-41 331.3 5.3 259 266-573 110-370 (377)
72 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.4E-35 4.8E-40 321.7 10.4 201 269-489 22-226 (353)
73 3q4u_A Activin receptor type-1 100.0 4.3E-35 1.5E-39 311.2 14.0 261 269-570 7-295 (301)
74 3p86_A Serine/threonine-protei 100.0 9.6E-36 3.3E-40 317.5 9.0 263 263-573 30-294 (309)
75 2bdw_A Hypothetical protein K1 100.0 6.2E-35 2.1E-39 318.1 15.5 254 269-572 28-286 (362)
76 3lb7_A RAF proto-oncogene seri 100.0 2.6E-35 9E-40 313.8 12.3 259 268-574 34-297 (307)
77 2qol_A Ephrin receptor; recept 100.0 1.9E-35 6.6E-40 323.5 11.2 257 269-574 44-306 (373)
78 3kul_A Ephrin type-A receptor 100.0 1.4E-35 4.8E-40 318.6 9.8 256 270-574 49-310 (325)
79 4eqm_A Protein kinase; transfe 100.0 4.8E-35 1.7E-39 309.9 13.5 201 270-489 11-214 (294)
80 3v8s_A RHO-associated protein 100.0 1.6E-35 5.3E-40 326.9 10.0 209 261-489 60-275 (410)
81 2y0a_A Death-associated protei 100.0 7.1E-35 2.4E-39 313.3 14.8 253 270-572 11-273 (326)
82 2yex_A Serine/threonine-protei 100.0 7.1E-35 2.4E-39 305.4 14.2 254 270-571 7-262 (276)
83 1kob_A Twitchin; kinase, intra 100.0 1.3E-34 4.5E-39 317.7 16.9 254 269-572 50-306 (387)
84 4dc2_A Protein kinase C IOTA t 100.0 5.9E-35 2E-39 320.5 14.0 201 269-489 51-255 (396)
85 1fot_A TPK1 delta, CAMP-depend 100.0 6.4E-35 2.2E-39 312.0 13.9 197 270-489 6-205 (318)
86 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.4E-35 1.9E-39 314.6 13.3 248 270-572 9-260 (336)
87 2zv2_A Calcium/calmodulin-depe 100.0 1.2E-34 4.2E-39 307.4 15.1 253 269-571 12-293 (298)
88 3l9p_A Anaplastic lymphoma kin 100.0 1.1E-35 3.7E-40 325.0 7.0 264 269-575 70-343 (367)
89 3ugc_A Tyrosine-protein kinase 100.0 1.4E-35 5E-40 314.1 7.7 274 269-573 9-287 (295)
90 3op5_A Serine/threonine-protei 100.0 9.3E-36 3.2E-40 325.5 6.2 270 268-573 33-325 (364)
91 3soa_A Calcium/calmodulin-depe 100.0 8.7E-35 3E-39 324.6 13.9 255 269-572 10-269 (444)
92 3c0i_A Peripheral plasma membr 100.0 4.9E-35 1.7E-39 317.9 11.3 256 270-571 24-287 (351)
93 2w4o_A Calcium/calmodulin-depe 100.0 6E-35 2.1E-39 316.8 12.0 253 268-571 51-306 (349)
94 3poz_A Epidermal growth factor 100.0 1.9E-35 6.4E-40 318.1 7.8 257 269-575 14-276 (327)
95 2vd5_A DMPK protein; serine/th 100.0 5.7E-35 2E-39 322.6 11.7 213 259-489 50-272 (412)
96 2pmi_A Negative RE, cyclin-dep 100.0 1.5E-34 5E-39 309.6 14.4 206 269-489 4-211 (317)
97 2izr_A Casein kinase I isoform 100.0 5.8E-35 2E-39 314.7 11.2 258 269-573 8-277 (330)
98 2i0e_A Protein kinase C-beta I 100.0 1.1E-34 3.8E-39 314.4 13.5 201 269-489 19-223 (353)
99 2x4f_A Myosin light chain kina 100.0 1.2E-34 4.1E-39 317.1 13.8 249 274-571 93-343 (373)
100 3qd2_B Eukaryotic translation 100.0 1.2E-34 4.2E-39 312.0 13.8 257 270-570 6-325 (332)
101 3kex_A Receptor tyrosine-prote 100.0 4.4E-35 1.5E-39 314.9 10.2 256 270-575 13-274 (325)
102 3a8x_A Protein kinase C IOTA t 100.0 1.6E-34 5.6E-39 312.5 14.7 200 270-489 9-212 (345)
103 1luf_A Muscle-specific tyrosin 100.0 3.3E-35 1.1E-39 318.3 9.1 272 263-574 40-332 (343)
104 1opk_A P150, C-ABL, proto-onco 100.0 1.5E-35 5.3E-40 336.5 6.7 261 264-574 214-475 (495)
105 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.1E-34 3.7E-39 314.4 12.7 197 270-489 41-240 (350)
106 3p1a_A MYT1 kinase, membrane-a 100.0 2.1E-35 7.2E-40 315.3 7.1 246 270-571 57-305 (311)
107 3ork_A Serine/threonine protei 100.0 2.7E-35 9.4E-40 314.5 7.6 207 269-489 11-221 (311)
108 4f0f_A Serine/threonine-protei 100.0 3.2E-34 1.1E-38 302.4 15.6 251 269-570 18-282 (287)
109 3kn6_A Ribosomal protein S6 ki 100.0 4.1E-34 1.4E-38 307.1 16.1 250 275-571 16-271 (325)
110 2acx_A G protein-coupled recep 100.0 2.1E-34 7.1E-39 327.9 14.6 204 268-490 182-388 (576)
111 3llt_A Serine/threonine kinase 100.0 1.9E-34 6.5E-39 314.6 13.4 213 254-489 19-261 (360)
112 4euu_A Serine/threonine-protei 100.0 1.3E-34 4.3E-39 310.5 11.6 278 270-573 9-305 (319)
113 3bz5_A Internalin-J, INLJ; leu 100.0 6.9E-33 2.4E-37 311.0 25.9 150 1-167 46-204 (457)
114 3qup_A Tyrosine-protein kinase 100.0 4.5E-35 1.5E-39 314.5 7.8 273 262-573 15-294 (323)
115 1rjb_A FL cytokine receptor; k 100.0 6.1E-35 2.1E-39 316.4 8.5 270 265-573 40-330 (344)
116 3o0g_A Cell division protein k 100.0 3E-34 1E-38 303.5 13.4 273 270-571 2-283 (292)
117 3niz_A Rhodanese family protei 100.0 2.3E-34 7.9E-39 307.2 12.5 276 269-571 20-301 (311)
118 2eue_A Carbon catabolite derep 100.0 3.6E-34 1.2E-38 300.0 13.7 247 270-571 13-263 (275)
119 3sxs_A Cytoplasmic tyrosine-pr 100.0 9.7E-35 3.3E-39 303.1 9.2 256 268-575 6-262 (268)
120 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.6E-34 5.3E-39 315.9 11.1 209 265-489 60-287 (365)
121 3f3z_A Calcium/calmodulin-depe 100.0 3.7E-34 1.3E-38 300.3 13.5 251 269-570 8-261 (277)
122 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.4E-34 2.2E-38 323.3 16.5 206 269-490 184-392 (543)
123 2ivs_A Proto-oncogene tyrosine 100.0 1.3E-34 4.6E-39 309.4 10.3 265 268-572 21-306 (314)
124 3dls_A PAS domain-containing s 100.0 2.1E-34 7.3E-39 310.6 11.9 243 269-571 23-275 (335)
125 4hcu_A Tyrosine-protein kinase 100.0 1E-34 3.4E-39 303.2 8.9 253 269-573 9-262 (269)
126 1csn_A Casein kinase-1; phosph 100.0 2.6E-34 8.8E-39 304.7 12.2 258 269-573 9-279 (298)
127 3g33_A Cell division protein k 100.0 2.8E-34 9.4E-39 306.2 12.5 283 268-571 7-297 (308)
128 3og7_A AKAP9-BRAF fusion prote 100.0 1.5E-34 5.1E-39 305.3 10.3 258 267-573 21-284 (289)
129 3tt0_A Basic fibroblast growth 100.0 2.1E-34 7.1E-39 316.8 11.7 268 268-575 67-350 (382)
130 3brb_A Proto-oncogene tyrosine 100.0 1.7E-34 5.7E-39 308.7 10.4 273 262-573 26-304 (313)
131 3gni_B Strad alpha; kinase fol 100.0 3.6E-34 1.2E-38 315.8 13.0 207 268-490 23-240 (389)
132 1k9a_A Carboxyl-terminal SRC k 100.0 1.5E-34 5.3E-39 324.5 10.1 252 266-573 189-441 (450)
133 2r5t_A Serine/threonine-protei 100.0 2.5E-34 8.6E-39 313.8 11.4 201 269-489 37-241 (373)
134 2eva_A TAK1 kinase - TAB1 chim 100.0 3E-34 1E-38 305.8 11.8 252 269-573 7-259 (307)
135 4ejn_A RAC-alpha serine/threon 100.0 1E-34 3.6E-39 325.9 8.6 201 269-489 147-351 (446)
136 2y94_A 5'-AMP-activated protei 100.0 5.2E-34 1.8E-38 320.4 14.2 249 270-572 16-268 (476)
137 3fdn_A Serine/threonine-protei 100.0 4E-34 1.4E-38 300.4 12.4 249 268-571 7-258 (279)
138 1qcf_A Haematopoetic cell kina 100.0 5.6E-35 1.9E-39 328.6 6.3 263 261-575 179-442 (454)
139 3i6u_A CDS1, serine/threonine- 100.0 6.5E-34 2.2E-38 316.4 14.7 254 268-571 133-400 (419)
140 3kk8_A Calcium/calmodulin depe 100.0 6.5E-34 2.2E-38 299.5 14.0 253 269-571 5-262 (284)
141 2a2a_A Death-associated protei 100.0 6E-34 2.1E-38 305.5 13.9 253 269-571 11-273 (321)
142 3cok_A Serine/threonine-protei 100.0 6E-34 2.1E-38 298.8 13.6 251 269-571 10-263 (278)
143 3dbq_A Dual specificity protei 100.0 8.7E-35 3E-39 315.0 7.4 254 268-572 7-275 (343)
144 3kfa_A Tyrosine-protein kinase 100.0 1.1E-34 3.9E-39 306.0 8.0 259 264-572 7-266 (288)
145 2clq_A Mitogen-activated prote 100.0 6.1E-34 2.1E-38 301.4 13.5 254 270-570 22-278 (295)
146 3dtc_A Mitogen-activated prote 100.0 2.4E-34 8.2E-39 300.6 10.0 250 269-571 6-267 (271)
147 1u5q_A Serine/threonine protei 100.0 4.8E-34 1.7E-38 309.3 12.7 248 270-572 54-307 (348)
148 3uc3_A Serine/threonine-protei 100.0 7.1E-34 2.4E-38 309.8 14.1 255 269-572 19-276 (361)
149 4fvq_A Tyrosine-protein kinase 100.0 2.1E-34 7.3E-39 304.0 9.5 249 269-573 7-271 (289)
150 3mdy_A Bone morphogenetic prot 100.0 1.4E-33 4.6E-38 304.7 15.9 270 268-575 35-329 (337)
151 1t46_A HOMO sapiens V-KIT hard 100.0 1.7E-34 5.7E-39 308.4 8.3 267 267-572 20-302 (313)
152 3a62_A Ribosomal protein S6 ki 100.0 3.2E-34 1.1E-38 308.3 10.5 201 269-489 16-223 (327)
153 1t4h_A Serine/threonine-protei 100.0 9.1E-34 3.1E-38 299.4 13.7 253 272-571 28-283 (290)
154 1p4o_A Insulin-like growth fac 100.0 8.1E-35 2.8E-39 312.3 5.7 274 260-573 15-295 (322)
155 2zmd_A Dual specificity protei 100.0 1.8E-34 6.2E-39 317.7 8.6 252 269-571 55-321 (390)
156 3rp9_A Mitogen-activated prote 100.0 6.4E-34 2.2E-38 320.8 13.2 203 269-485 52-282 (458)
157 3oz6_A Mitogen-activated prote 100.0 6.6E-34 2.3E-38 313.6 13.0 203 269-489 8-233 (388)
158 3gxj_A TGF-beta receptor type- 100.0 5.4E-35 1.8E-39 310.7 4.1 265 270-575 3-295 (303)
159 3n9x_A Phosphotransferase; mal 100.0 7.9E-34 2.7E-38 317.2 13.7 206 269-488 25-253 (432)
160 3hko_A Calcium/calmodulin-depe 100.0 4.4E-34 1.5E-38 309.7 11.3 270 264-570 20-330 (345)
161 2v62_A Serine/threonine-protei 100.0 1.7E-34 5.8E-39 313.0 7.8 265 269-573 36-324 (345)
162 1nxk_A MAP kinase-activated pr 100.0 7.2E-34 2.5E-38 313.9 13.0 255 270-571 61-322 (400)
163 3gen_A Tyrosine-protein kinase 100.0 1.4E-34 4.8E-39 304.4 6.8 256 265-572 19-275 (283)
164 3lzb_A Epidermal growth factor 100.0 2.4E-34 8.3E-39 309.3 8.7 257 269-575 14-276 (327)
165 2rku_A Serine/threonine-protei 100.0 1.7E-33 5.9E-38 297.9 15.0 250 269-571 14-266 (294)
166 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-34 4.5E-39 325.3 6.7 259 263-573 177-436 (452)
167 3lxl_A Tyrosine-protein kinase 100.0 1.7E-34 5.9E-39 310.6 7.3 265 270-573 23-299 (327)
168 2xir_A Vascular endothelial gr 100.0 2.3E-34 7.9E-39 307.8 8.2 277 259-573 16-306 (316)
169 2ac3_A MAP kinase-interacting 100.0 9.1E-34 3.1E-38 303.3 12.8 265 270-571 12-296 (316)
170 3g2f_A Bone morphogenetic prot 100.0 1.1E-33 3.7E-38 305.4 13.1 274 269-571 12-312 (336)
171 4agu_A Cyclin-dependent kinase 100.0 4.4E-34 1.5E-38 305.0 9.6 200 270-489 3-205 (311)
172 2pvf_A Fibroblast growth facto 100.0 5.2E-34 1.8E-38 307.8 10.2 268 268-575 33-316 (334)
173 3lm5_A Serine/threonine-protei 100.0 1.5E-33 5.2E-38 303.1 13.8 265 259-571 17-288 (327)
174 2i1m_A Macrophage colony-stimu 100.0 1.4E-34 4.7E-39 312.2 5.3 270 264-572 40-321 (333)
175 3fme_A Dual specificity mitoge 100.0 2.9E-34 1E-38 303.0 7.8 256 268-571 5-267 (290)
176 3ttj_A Mitogen-activated prote 100.0 4.4E-33 1.5E-37 313.3 17.8 202 269-489 61-265 (464)
177 3qyz_A Mitogen-activated prote 100.0 1.2E-33 4E-38 308.8 12.6 286 269-572 26-315 (364)
178 2buj_A Serine/threonine-protei 100.0 3.4E-34 1.2E-38 306.8 8.1 266 268-573 27-302 (317)
179 3bhy_A Death-associated protei 100.0 1.7E-33 5.7E-38 296.2 13.1 251 270-570 5-265 (283)
180 2vgo_A Serine/threonine-protei 100.0 1.7E-33 5.9E-38 296.3 13.0 246 270-570 14-262 (284)
181 2owb_A Serine/threonine-protei 100.0 1.9E-33 6.5E-38 303.5 13.6 249 269-570 40-291 (335)
182 3is5_A Calcium-dependent prote 100.0 5E-34 1.7E-38 300.6 8.8 253 270-570 22-278 (285)
183 2jam_A Calcium/calmodulin-depe 100.0 1.3E-33 4.3E-38 300.5 11.8 251 270-571 9-262 (304)
184 3kmu_A ILK, integrin-linked ki 100.0 7.8E-34 2.7E-38 296.5 10.0 252 269-572 9-265 (271)
185 2h34_A Serine/threonine-protei 100.0 2E-33 6.8E-38 299.7 13.3 202 269-489 33-237 (309)
186 3byv_A Rhoptry kinase; malaria 100.0 9.7E-35 3.3E-39 318.9 3.1 254 268-571 71-360 (377)
187 3c1x_A Hepatocyte growth facto 100.0 6.7E-34 2.3E-38 311.0 9.7 255 271-573 90-351 (373)
188 3a7i_A MST3 kinase, serine/thr 100.0 3E-33 1E-37 297.4 14.5 251 269-572 21-272 (303)
189 3pls_A Macrophage-stimulating 100.0 1.7E-33 5.7E-38 298.5 12.5 255 271-572 22-282 (298)
190 1mp8_A Focal adhesion kinase 1 100.0 3.3E-34 1.1E-38 301.4 7.0 255 267-572 12-271 (281)
191 3pfq_A PKC-B, PKC-beta, protei 100.0 2.8E-33 9.7E-38 328.4 15.2 202 268-489 339-544 (674)
192 1ob3_A PFPK5, cell division co 100.0 2.2E-33 7.4E-38 296.3 12.8 199 270-489 2-203 (288)
193 3pg1_A Mitogen-activated prote 100.0 1.7E-33 5.7E-38 307.4 12.2 214 259-489 11-236 (362)
194 4aaa_A Cyclin-dependent kinase 100.0 1.2E-33 4.1E-38 304.6 11.0 268 270-571 25-307 (331)
195 3mtl_A Cell division protein k 100.0 5.3E-34 1.8E-38 306.3 8.1 279 270-572 2-283 (324)
196 2ozo_A Tyrosine-protein kinase 100.0 1.2E-33 4.2E-38 328.4 11.5 246 277-572 343-593 (613)
197 4eut_A Serine/threonine-protei 100.0 5.4E-34 1.9E-38 314.9 8.1 279 270-570 9-302 (396)
198 2qr7_A Ribosomal protein S6 ki 100.0 1.7E-33 5.7E-38 304.3 11.5 254 269-572 21-279 (342)
199 2yfx_A Tyrosine-protein kinase 100.0 5.8E-34 2E-38 306.5 7.8 263 268-573 28-300 (327)
200 3nsz_A CK II alpha, casein kin 100.0 2.6E-33 9E-38 301.7 12.9 268 269-571 35-320 (330)
201 4hgt_A Casein kinase I isoform 100.0 2.2E-33 7.6E-38 297.1 11.8 260 268-573 7-276 (296)
202 2wqm_A Serine/threonine-protei 100.0 1.4E-33 4.9E-38 301.0 10.3 259 270-573 32-293 (310)
203 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.1E-33 3.6E-38 304.6 9.3 201 268-489 32-240 (329)
204 2w5a_A Serine/threonine-protei 100.0 7.5E-34 2.6E-38 298.2 7.9 262 269-573 5-270 (279)
205 1mqb_A Ephrin type-A receptor 100.0 1.2E-33 4.1E-38 304.7 9.7 255 270-573 44-305 (333)
206 1b6c_B TGF-B superfamily recep 100.0 5.5E-33 1.9E-37 300.7 14.9 269 266-575 38-334 (342)
207 3o6n_A APL1; leucine-rich repe 100.0 4.7E-32 1.6E-36 299.1 22.6 137 19-168 43-179 (390)
208 4e5w_A Tyrosine-protein kinase 100.0 9.5E-34 3.2E-38 301.0 8.7 271 270-572 21-297 (302)
209 3uzp_A CKI-delta, CKID, casein 100.0 2.4E-33 8.3E-38 296.9 11.6 259 269-573 8-276 (296)
210 1xbb_A Tyrosine-protein kinase 100.0 4.9E-34 1.7E-38 301.7 6.2 256 267-573 13-275 (291)
211 3eqc_A Dual specificity mitoge 100.0 9.4E-34 3.2E-38 309.1 8.2 199 269-489 32-232 (360)
212 2vwi_A Serine/threonine-protei 100.0 1E-33 3.5E-38 300.7 8.3 272 266-571 11-288 (303)
213 3an0_A Dual specificity mitoge 100.0 1.1E-33 3.7E-38 306.1 8.4 258 266-571 47-311 (340)
214 3cc6_A Protein tyrosine kinase 100.0 1.2E-33 4.1E-38 297.1 8.5 255 268-573 10-269 (281)
215 3ll6_A Cyclin G-associated kin 100.0 2.5E-33 8.7E-38 302.4 11.2 264 266-573 24-304 (337)
216 2h8h_A Proto-oncogene tyrosine 100.0 3.3E-34 1.1E-38 328.5 4.3 261 262-574 259-520 (535)
217 3mi9_A Cell division protein k 100.0 4.7E-33 1.6E-37 302.5 13.2 207 270-489 17-231 (351)
218 3t9t_A Tyrosine-protein kinase 100.0 1.2E-33 4E-38 294.6 7.9 253 268-572 6-259 (267)
219 1x8b_A WEE1HU, WEE1-like prote 100.0 2.6E-33 8.9E-38 295.2 10.6 249 269-572 10-281 (289)
220 1cm8_A Phosphorylated MAP kina 100.0 3.5E-33 1.2E-37 305.0 12.0 201 269-489 24-228 (367)
221 1qpc_A LCK kinase; alpha beta 100.0 8.6E-34 2.9E-38 297.8 6.8 258 264-573 7-265 (279)
222 1u59_A Tyrosine-protein kinase 100.0 2E-33 6.9E-38 296.3 9.7 254 270-573 9-268 (287)
223 3f66_A Hepatocyte growth facto 100.0 2.8E-33 9.7E-38 296.8 10.9 256 270-573 25-287 (298)
224 2wtk_C Serine/threonine-protei 100.0 7.8E-33 2.7E-37 294.4 14.3 253 270-570 5-263 (305)
225 3nyv_A Calmodulin-domain prote 100.0 3.3E-33 1.1E-37 317.3 12.0 252 269-571 25-282 (484)
226 2y7j_A Phosphorylase B kinase 100.0 4.7E-33 1.6E-37 303.9 12.8 256 265-570 89-359 (365)
227 2fst_X Mitogen-activated prote 100.0 3.1E-33 1.1E-37 305.2 11.3 201 269-489 28-232 (367)
228 2a19_B Interferon-induced, dou 100.0 1E-33 3.5E-38 297.9 7.2 252 269-575 10-272 (284)
229 4fl3_A Tyrosine-protein kinase 100.0 1.9E-33 6.3E-38 327.7 9.9 247 276-573 375-627 (635)
230 3lij_A Calcium/calmodulin depe 100.0 4.6E-33 1.6E-37 316.6 12.8 251 269-571 36-292 (494)
231 3mwu_A Calmodulin-domain prote 100.0 5.7E-33 2E-37 315.3 13.5 250 270-571 22-277 (486)
232 3o6n_A APL1; leucine-rich repe 100.0 5.3E-32 1.8E-36 298.6 20.8 150 1-167 49-199 (390)
233 2pml_X PFPK7, Ser/Thr protein 100.0 7E-33 2.4E-37 300.7 13.3 271 269-571 30-323 (348)
234 2h6d_A 5'-AMP-activated protei 100.0 5E-33 1.7E-37 291.4 11.7 249 269-571 10-262 (276)
235 1phk_A Phosphorylase kinase; g 100.0 9.8E-33 3.3E-37 292.6 14.1 252 269-570 16-283 (298)
236 2x7f_A TRAF2 and NCK-interacti 100.0 2.9E-33 9.8E-38 300.8 10.1 269 258-571 12-287 (326)
237 3com_A Serine/threonine-protei 100.0 8.5E-33 2.9E-37 295.5 13.7 252 269-571 28-279 (314)
238 3oja_B Anopheles plasmodium-re 100.0 4.9E-32 1.7E-36 315.5 21.2 138 19-169 49-186 (597)
239 3lxp_A Non-receptor tyrosine-p 100.0 3.8E-34 1.3E-38 306.6 3.2 262 272-573 33-306 (318)
240 2j7t_A Serine/threonine-protei 100.0 2.2E-33 7.4E-38 298.3 8.6 254 269-571 18-276 (302)
241 3q5i_A Protein kinase; CDPK, m 100.0 7.9E-33 2.7E-37 315.5 13.8 253 269-572 35-303 (504)
242 2ycf_A Serine/threonine-protei 100.0 6.3E-33 2.2E-37 297.7 12.3 253 269-571 9-275 (322)
243 2b9h_A MAP kinase FUS3, mitoge 100.0 6.4E-33 2.2E-37 301.6 12.4 206 269-489 10-225 (353)
244 3eb0_A Putative uncharacterize 100.0 3.2E-33 1.1E-37 307.5 9.9 284 265-571 2-322 (383)
245 2i6l_A Mitogen-activated prote 100.0 5.6E-33 1.9E-37 297.4 11.5 206 269-489 10-227 (320)
246 1ua2_A CAK, cell division prot 100.0 4.6E-33 1.6E-37 301.9 10.9 273 267-571 7-292 (346)
247 1vzo_A Ribosomal protein S6 ki 100.0 2.3E-33 8E-38 305.1 8.4 203 269-490 53-265 (355)
248 3oja_B Anopheles plasmodium-re 100.0 1.2E-31 4.1E-36 312.3 23.4 117 43-172 49-165 (597)
249 4fmz_A Internalin; leucine ric 100.0 4.4E-31 1.5E-35 286.4 26.2 170 578-760 176-345 (347)
250 3cek_A Dual specificity protei 100.0 8.8E-34 3E-38 303.1 4.7 265 256-571 14-293 (313)
251 3e3p_A Protein kinase, putativ 100.0 1.3E-32 4.4E-37 300.1 13.7 293 263-572 16-316 (360)
252 2w1i_A JAK2; chromosomal rearr 100.0 4.1E-33 1.4E-37 299.7 9.6 265 269-572 40-317 (326)
253 4fmz_A Internalin; leucine ric 100.0 4.4E-31 1.5E-35 286.4 25.5 194 577-785 153-346 (347)
254 1ogq_A PGIP-2, polygalacturona 100.0 1.6E-32 5.4E-37 293.1 13.9 232 555-789 50-285 (313)
255 3sv0_A Casein kinase I-like; t 100.0 1.4E-32 4.6E-37 309.5 13.8 259 269-574 6-275 (483)
256 1fvr_A Tyrosine-protein kinase 100.0 6E-33 2.1E-37 298.5 10.3 261 269-572 24-295 (327)
257 2r3i_A Cell division protein k 100.0 8.9E-33 3E-37 293.1 11.1 201 270-489 3-206 (299)
258 4exu_A Mitogen-activated prote 100.0 1.4E-32 4.7E-37 301.0 12.8 200 269-489 41-244 (371)
259 2jii_A Serine/threonine-protei 100.0 1E-33 3.4E-38 307.9 3.5 262 269-573 41-332 (352)
260 2xrw_A Mitogen-activated prote 100.0 4.3E-32 1.5E-36 297.1 16.3 201 270-489 25-228 (371)
261 1wak_A Serine/threonine-protei 100.0 2.8E-32 9.7E-37 301.3 14.4 202 270-490 37-296 (397)
262 1byg_A CSK, protein (C-termina 100.0 2.7E-33 9.2E-38 293.9 5.7 248 269-572 20-268 (278)
263 3kvw_A DYRK2, dual specificity 100.0 2.7E-32 9.4E-37 304.1 13.6 198 269-489 96-301 (429)
264 3q60_A ROP5B; pseudokinase, tr 100.0 1.8E-33 6.3E-38 308.1 3.2 259 269-571 61-353 (371)
265 1blx_A Cyclin-dependent kinase 100.0 2E-32 6.8E-37 294.2 11.0 208 267-489 8-221 (326)
266 3coi_A Mitogen-activated prote 100.0 4E-32 1.4E-36 295.4 12.9 200 269-489 23-226 (353)
267 1u46_A ACK-1, activated CDC42 100.0 1.1E-32 3.9E-37 291.0 8.0 255 269-572 17-279 (291)
268 3aln_A Dual specificity mitoge 100.0 3.2E-32 1.1E-36 292.9 11.1 259 269-571 21-286 (327)
269 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.7E-32 6E-37 293.7 8.8 262 261-574 24-299 (319)
270 3fhr_A MAP kinase-activated pr 100.0 3.4E-32 1.2E-36 293.7 10.2 258 269-571 27-288 (336)
271 1z57_A Dual specificity protei 100.0 1.2E-31 4.1E-36 289.4 14.3 198 269-489 13-236 (339)
272 2wei_A Calmodulin-domain prote 100.0 6.5E-32 2.2E-36 284.8 11.7 251 269-570 21-276 (287)
273 1j1b_A Glycogen synthase kinas 100.0 2.8E-32 9.6E-37 303.3 9.3 278 270-571 54-337 (420)
274 1zy4_A Serine/threonine-protei 100.0 4E-32 1.4E-36 288.2 9.4 259 269-571 5-284 (303)
275 3qa8_A MGC80376 protein; kinas 100.0 8.3E-32 2.8E-36 309.4 12.6 278 270-570 14-297 (676)
276 3rgf_A Cyclin-dependent kinase 100.0 1.5E-31 5.2E-36 296.4 14.2 210 271-490 21-239 (405)
277 4e7w_A Glycogen synthase kinas 100.0 3.2E-32 1.1E-36 300.4 8.5 278 270-571 40-322 (394)
278 2ft3_A Biglycan; proteoglycan, 100.0 6E-30 2.1E-34 275.7 26.1 142 6-167 13-160 (332)
279 2ft3_A Biglycan; proteoglycan, 100.0 7.1E-30 2.4E-34 275.1 26.1 149 1-167 37-185 (332)
280 3a99_A Proto-oncogene serine/t 100.0 2.6E-32 8.8E-37 292.6 6.9 244 267-571 40-294 (320)
281 2dyl_A Dual specificity mitoge 100.0 5.4E-32 1.9E-36 289.7 9.1 253 269-571 24-284 (318)
282 1xku_A Decorin; proteoglycan, 100.0 1.1E-29 3.9E-34 273.3 27.3 129 20-167 30-158 (330)
283 2j0j_A Focal adhesion kinase 1 100.0 5E-32 1.7E-36 316.8 8.8 258 265-573 385-647 (656)
284 2vx3_A Dual specificity tyrosi 100.0 2.4E-31 8.2E-36 292.4 13.3 208 261-489 45-260 (382)
285 2iwi_A Serine/threonine-protei 100.0 2.4E-32 8.2E-37 291.7 4.7 245 265-570 26-283 (312)
286 2eu9_A Dual specificity protei 100.0 4.1E-31 1.4E-35 287.3 14.0 198 269-489 18-241 (355)
287 1q8y_A SR protein kinase; tran 100.0 1.8E-31 6.1E-36 292.4 11.1 203 269-490 18-238 (373)
288 2rio_A Serine/threonine-protei 100.0 2.1E-31 7.3E-36 297.5 11.7 257 273-573 18-298 (434)
289 1xku_A Decorin; proteoglycan, 100.0 2.9E-29 9.9E-34 270.1 27.9 176 580-759 146-330 (330)
290 3p23_A Serine/threonine-protei 100.0 3.1E-31 1.1E-35 295.4 11.9 253 268-572 22-285 (432)
291 1ogq_A PGIP-2, polygalacturona 100.0 4.3E-31 1.5E-35 281.9 11.9 232 552-787 73-307 (313)
292 2pzi_A Probable serine/threoni 100.0 1E-30 3.4E-35 308.7 11.9 198 269-489 79-278 (681)
293 3dzo_A Rhoptry kinase domain; 100.0 7.7E-31 2.6E-35 291.1 7.6 254 267-570 75-363 (413)
294 1z7x_W Ribonuclease inhibitor; 100.0 2.3E-32 8E-37 308.4 -7.2 109 21-129 3-125 (461)
295 2vuw_A Serine/threonine-protei 100.0 2E-30 6.8E-35 279.9 5.3 196 269-488 19-278 (336)
296 3m2w_A MAP kinase-activated pr 100.0 1.2E-29 4.1E-34 269.1 9.5 236 270-571 17-257 (299)
297 1ozn_A Reticulon 4 receptor; N 100.0 3.9E-28 1.3E-32 255.5 20.3 225 559-787 15-240 (285)
298 4fcg_A Uncharacterized protein 100.0 1.6E-28 5.4E-33 263.7 17.4 227 554-786 80-315 (328)
299 3uqc_A Probable conserved tran 100.0 7.2E-29 2.5E-33 261.1 13.6 171 270-489 31-204 (286)
300 3zyj_A Leucine-rich repeat-con 100.0 6.2E-28 2.1E-32 270.4 20.5 229 555-786 64-293 (440)
301 2z66_A Variable lymphocyte rec 100.0 2.2E-28 7.4E-33 260.3 15.8 231 555-787 28-263 (306)
302 1z7x_W Ribonuclease inhibitor; 100.0 2.1E-32 7.3E-37 308.7 -16.2 159 1-167 7-183 (461)
303 4fcg_A Uncharacterized protein 100.0 3.2E-28 1.1E-32 261.3 16.7 206 578-789 80-294 (328)
304 3zyi_A Leucine-rich repeat-con 100.0 7.6E-28 2.6E-32 270.6 20.4 229 555-786 75-304 (452)
305 2z62_A TOLL-like receptor 4, v 99.9 1.7E-27 5.9E-32 249.4 17.0 209 579-789 28-241 (276)
306 2z80_A TOLL-like receptor 2, v 99.9 3.9E-28 1.3E-32 263.9 10.1 233 555-788 52-317 (353)
307 1ozn_A Reticulon 4 receptor; N 99.9 2.1E-27 7.3E-32 249.9 14.1 208 555-763 32-240 (285)
308 2o6q_A Variable lymphocyte rec 99.9 2.5E-26 8.5E-31 239.7 21.7 202 581-786 18-219 (270)
309 3zyi_A Leucine-rich repeat-con 99.9 1.3E-26 4.5E-31 260.5 20.5 226 558-789 57-283 (452)
310 1wwl_A Monocyte differentiatio 99.9 4.3E-28 1.5E-32 258.7 8.0 204 577-787 93-311 (312)
311 3zyj_A Leucine-rich repeat-con 99.9 1.4E-26 4.8E-31 259.4 19.8 225 559-789 47-272 (440)
312 2z66_A Variable lymphocyte rec 99.9 6.1E-27 2.1E-31 249.1 15.0 226 559-789 11-240 (306)
313 1p9a_G Platelet glycoprotein I 99.9 2.7E-26 9.3E-31 241.7 19.1 205 574-786 5-209 (290)
314 2z80_A TOLL-like receptor 2, v 99.9 7.1E-27 2.4E-31 253.9 11.1 231 553-787 29-292 (353)
315 1wwl_A Monocyte differentiatio 99.9 2.8E-27 9.6E-32 252.4 5.8 228 552-787 40-289 (312)
316 3rfs_A Internalin B, repeat mo 99.9 6.2E-26 2.1E-30 236.9 15.5 204 574-789 36-239 (272)
317 3o53_A Protein LRIM1, AGAP0063 99.9 2.1E-26 7.3E-31 246.1 9.8 222 549-785 28-250 (317)
318 3g06_A SSPH2 (leucine-rich rep 99.9 1.1E-24 3.8E-29 251.7 24.8 142 581-743 163-304 (622)
319 2o6q_A Variable lymphocyte rec 99.9 5.9E-25 2E-29 229.3 20.2 208 552-763 12-220 (270)
320 3oja_A Leucine-rich immune mol 99.9 3.3E-26 1.1E-30 259.0 11.1 225 546-785 25-250 (487)
321 3g06_A SSPH2 (leucine-rich rep 99.9 3E-24 1E-28 248.0 26.6 129 578-723 180-308 (622)
322 3rfs_A Internalin B, repeat mo 99.9 9.4E-25 3.2E-29 228.0 18.7 206 577-789 17-222 (272)
323 4azs_A Methyltransferase WBDD; 99.9 1.2E-26 4.2E-31 266.3 4.7 186 278-487 242-438 (569)
324 4glp_A Monocyte differentiatio 99.9 2.1E-25 7.3E-30 237.6 12.6 204 577-787 89-309 (310)
325 2z62_A TOLL-like receptor 4, v 99.9 6E-25 2.1E-29 230.0 15.3 207 556-764 29-240 (276)
326 2xwt_C Thyrotropin receptor; s 99.9 5.4E-25 1.8E-29 225.2 13.2 198 579-783 31-237 (239)
327 3o53_A Protein LRIM1, AGAP0063 99.9 2E-25 6.7E-30 238.6 10.2 218 556-787 11-229 (317)
328 1p9a_G Platelet glycoprotein I 99.9 3.5E-24 1.2E-28 225.5 19.0 201 554-762 9-209 (290)
329 3m19_A Variable lymphocyte rec 99.9 7.2E-24 2.5E-28 218.5 20.5 181 579-763 14-194 (251)
330 3ogk_B Coronatine-insensitive 99.9 2.3E-27 8E-32 276.3 -7.0 229 552-781 290-547 (592)
331 3oja_A Leucine-rich immune mol 99.9 4.8E-25 1.7E-29 249.4 12.1 198 576-787 31-229 (487)
332 2xwt_C Thyrotropin receptor; s 99.9 2.1E-24 7.2E-29 220.7 14.1 198 583-788 15-221 (239)
333 3m19_A Variable lymphocyte rec 99.9 1.1E-23 3.8E-28 217.1 19.2 184 552-738 10-194 (251)
334 1h6u_A Internalin H; cell adhe 99.9 6E-24 2.1E-28 225.9 15.5 195 575-786 37-231 (308)
335 3ogk_B Coronatine-insensitive 99.9 6.7E-27 2.3E-31 272.4 -10.2 185 576-760 339-550 (592)
336 2o6s_A Variable lymphocyte rec 99.9 1.4E-22 4.8E-27 202.4 14.7 181 582-773 10-190 (208)
337 4glp_A Monocyte differentiatio 99.9 3.1E-23 1.1E-27 220.8 10.4 202 554-762 90-308 (310)
338 2ca6_A RAN GTPase-activating p 99.9 7.3E-25 2.5E-29 241.0 -2.9 242 547-788 24-319 (386)
339 3en9_A Glycoprotease, O-sialog 99.9 1.9E-23 6.5E-28 238.5 7.2 188 271-488 337-539 (540)
340 2p1m_B Transport inhibitor res 99.9 4.4E-25 1.5E-29 257.1 -8.5 229 553-783 287-542 (594)
341 1h6u_A Internalin H; cell adhe 99.9 3.7E-22 1.3E-26 212.1 14.6 192 554-762 40-231 (308)
342 3cvr_A Invasion plasmid antige 99.9 6.1E-22 2.1E-26 226.0 15.9 190 553-771 57-253 (571)
343 2o6s_A Variable lymphocyte rec 99.9 9.4E-22 3.2E-26 196.4 15.1 173 606-789 10-182 (208)
344 4ay9_X Follicle-stimulating ho 99.9 3.9E-22 1.3E-26 216.1 10.9 192 579-772 30-226 (350)
345 2xot_A Amphoterin-induced prot 99.9 1.4E-21 4.8E-26 212.6 14.4 176 582-761 21-202 (361)
346 3goz_A Leucine-rich repeat-con 99.9 1.7E-23 6E-28 227.9 -0.7 236 551-787 18-299 (362)
347 4ay9_X Follicle-stimulating ho 99.9 2.3E-21 7.7E-26 210.1 14.2 202 582-788 12-218 (350)
348 3goz_A Leucine-rich repeat-con 99.9 2.7E-23 9.1E-28 226.4 -1.2 226 561-786 4-267 (362)
349 1h6t_A Internalin B; cell adhe 99.8 3.9E-21 1.3E-25 202.4 14.5 175 574-763 41-215 (291)
350 3cvr_A Invasion plasmid antige 99.8 2.6E-21 8.8E-26 220.8 13.5 181 580-789 60-247 (571)
351 2p1m_B Transport inhibitor res 99.8 5.5E-24 1.9E-28 247.8 -9.4 210 550-761 309-544 (594)
352 2xot_A Amphoterin-induced prot 99.8 3.5E-21 1.2E-25 209.4 13.1 175 559-736 22-202 (361)
353 2ast_B S-phase kinase-associat 99.8 9E-23 3.1E-27 219.8 -0.2 228 555-789 70-310 (336)
354 2ca6_A RAN GTPase-activating p 99.8 4.6E-23 1.6E-27 226.7 -2.7 216 570-786 23-288 (386)
355 1h6t_A Internalin B; cell adhe 99.8 3.5E-21 1.2E-25 202.8 11.8 189 581-786 26-214 (291)
356 2v9t_B SLIT homolog 2 protein 99.8 1.3E-20 4.5E-25 189.7 15.1 152 582-736 14-165 (220)
357 2ast_B S-phase kinase-associat 99.8 3.1E-22 1.1E-26 215.6 2.6 224 557-786 49-285 (336)
358 2v9t_B SLIT homolog 2 protein 99.8 2.9E-20 1E-24 187.2 16.7 153 606-762 14-166 (220)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-20 4.2E-25 189.9 13.4 158 582-742 14-172 (220)
360 1m9s_A Internalin B; cell inva 99.8 1.6E-20 5.5E-25 216.6 15.9 179 574-767 38-216 (605)
361 3e6j_A Variable lymphocyte rec 99.8 5E-20 1.7E-24 186.7 17.4 155 605-764 21-175 (229)
362 2v70_A SLIT-2, SLIT homolog 2 99.8 3.1E-20 1.1E-24 187.0 15.7 154 606-763 14-168 (220)
363 3e6j_A Variable lymphocyte rec 99.8 9.6E-20 3.3E-24 184.6 17.3 156 581-740 21-176 (229)
364 1zar_A RIO2 kinase; serine kin 99.8 7.1E-21 2.4E-25 199.1 8.2 154 262-461 82-253 (282)
365 1m9s_A Internalin B; cell inva 99.8 4.7E-20 1.6E-24 212.8 15.2 189 581-786 23-211 (605)
366 1xeu_A Internalin C; cellular 99.8 4.6E-20 1.6E-24 191.1 11.2 171 577-763 17-187 (263)
367 1xeu_A Internalin C; cellular 99.8 6.7E-20 2.3E-24 189.9 11.3 171 601-787 17-187 (263)
368 4ezg_A Putative uncharacterize 99.8 1.1E-19 3.7E-24 179.8 12.1 153 600-761 41-194 (197)
369 4ezg_A Putative uncharacterize 99.8 1.3E-19 4.4E-24 179.2 11.6 156 623-787 40-196 (197)
370 1dce_A Protein (RAB geranylger 99.8 5.8E-22 2E-26 227.3 -8.8 196 576-779 346-567 (567)
371 1w8a_A SLIT protein; signaling 99.8 5.2E-19 1.8E-23 174.0 11.2 133 606-741 11-144 (192)
372 1w8a_A SLIT protein; signaling 99.8 1.9E-18 6.4E-23 170.0 12.5 127 1-130 12-139 (192)
373 4b8c_D Glucose-repressible alc 99.8 1.1E-19 3.7E-24 214.9 2.7 192 583-786 205-405 (727)
374 1dce_A Protein (RAB geranylger 99.7 1.3E-19 4.4E-24 207.8 2.0 196 553-755 347-567 (567)
375 3sb4_A Hypothetical leucine ri 99.7 8E-18 2.7E-22 180.5 12.7 182 594-779 84-328 (329)
376 4b8c_D Glucose-repressible alc 99.7 5.4E-19 1.8E-23 209.0 2.6 192 579-782 173-369 (727)
377 2ell_A Acidic leucine-rich nuc 99.7 8.3E-18 2.8E-22 161.5 9.4 131 604-736 25-160 (168)
378 2ell_A Acidic leucine-rich nuc 99.7 2.5E-17 8.7E-22 158.1 11.7 137 626-766 23-164 (168)
379 2wfh_A SLIT homolog 2 protein 99.7 7.5E-17 2.6E-21 158.5 14.0 126 583-712 14-139 (193)
380 2wfh_A SLIT homolog 2 protein 99.7 1.3E-16 4.3E-21 156.9 14.2 128 630-762 13-140 (193)
381 2o6r_A Variable lymphocyte rec 99.7 2E-16 6.7E-21 153.4 13.7 134 628-765 8-141 (177)
382 2o6r_A Variable lymphocyte rec 99.7 2.2E-16 7.5E-21 153.0 14.0 129 606-737 10-138 (177)
383 2je0_A Acidic leucine-rich nuc 99.7 3.5E-17 1.2E-21 153.8 7.9 107 604-712 18-126 (149)
384 2je0_A Acidic leucine-rich nuc 99.7 7.7E-17 2.6E-21 151.4 9.6 108 627-736 17-126 (149)
385 1zth_A RIO1 serine protein kin 99.7 4.5E-17 1.5E-21 168.0 8.6 141 271-438 48-222 (258)
386 1a9n_A U2A', U2A'; complex (nu 99.6 3.1E-16 1E-20 151.8 9.4 132 624-761 16-153 (176)
387 3sb4_A Hypothetical leucine ri 99.6 7.8E-16 2.7E-20 164.9 12.7 198 554-755 48-328 (329)
388 1a9n_A U2A', U2A'; complex (nu 99.6 1.7E-16 5.9E-21 153.6 6.8 132 599-736 15-153 (176)
389 4fdw_A Leucine rich hypothetic 99.6 4.2E-15 1.4E-19 163.0 17.6 217 556-782 158-380 (401)
390 4fdw_A Leucine rich hypothetic 99.6 3.3E-15 1.1E-19 163.8 16.6 219 556-786 136-359 (401)
391 1ds9_A Outer arm dynein; leuci 99.6 8.4E-18 2.9E-22 166.2 -7.9 133 622-761 43-185 (198)
392 1ds9_A Outer arm dynein; leuci 99.6 5.5E-18 1.9E-22 167.6 -9.7 156 574-736 13-185 (198)
393 3g39_A Variable lymphocyte rec 99.5 3.1E-14 1.1E-18 136.7 12.4 104 23-129 11-114 (170)
394 2r9u_A Variable lymphocyte rec 99.5 4E-14 1.4E-18 136.5 12.6 103 24-129 15-117 (174)
395 3g39_A Variable lymphocyte rec 99.5 4.4E-14 1.5E-18 135.7 12.5 104 606-712 12-115 (170)
396 2r9u_A Variable lymphocyte rec 99.5 6.5E-14 2.2E-18 135.0 12.8 104 606-712 15-118 (174)
397 4gyi_A RIO2 kinase; protein ki 99.5 2.2E-14 7.4E-19 153.7 6.4 145 266-439 91-269 (397)
398 3un9_A NLR family member X1; l 99.4 3.4E-15 1.2E-19 162.1 -8.0 159 578-736 71-252 (372)
399 3un9_A NLR family member X1; l 99.4 4.6E-15 1.6E-19 161.1 -7.7 183 602-785 71-283 (372)
400 2ifg_A High affinity nerve gro 99.4 1.2E-12 4E-17 141.2 11.1 102 2-106 13-116 (347)
401 2ifg_A High affinity nerve gro 99.4 7.1E-13 2.4E-17 143.0 8.5 104 607-713 12-117 (347)
402 4fs7_A Uncharacterized protein 99.3 3.5E-11 1.2E-15 132.0 20.1 115 32-164 58-172 (394)
403 4gt6_A Cell surface protein; l 99.1 7.3E-10 2.5E-14 121.4 17.6 111 668-783 258-368 (394)
404 4fs7_A Uncharacterized protein 99.1 6.5E-10 2.2E-14 121.8 16.6 217 553-782 160-376 (394)
405 4gt6_A Cell surface protein; l 99.0 4.1E-09 1.4E-13 115.5 15.9 134 644-785 258-391 (394)
406 2ra8_A Uncharacterized protein 99.0 9E-11 3.1E-15 126.2 2.4 84 697-783 250-341 (362)
407 3tm0_A Aminoglycoside 3'-phosp 98.9 2E-09 7E-14 110.7 9.5 145 268-434 12-213 (263)
408 2ra8_A Uncharacterized protein 98.9 3.7E-10 1.3E-14 121.4 3.5 137 646-786 167-321 (362)
409 1nd4_A Aminoglycoside 3'-phosp 98.8 3.6E-09 1.2E-13 108.5 7.1 139 269-434 19-214 (264)
410 4h09_A Hypothetical leucine ri 98.8 1E-07 3.4E-12 103.7 16.9 221 553-782 67-343 (379)
411 3dxp_A Putative acyl-COA dehyd 98.6 1.3E-07 4.5E-12 102.0 11.1 146 274-435 42-249 (359)
412 4h09_A Hypothetical leucine ri 98.6 6.1E-07 2.1E-11 97.5 16.2 210 556-773 136-357 (379)
413 1io0_A Tropomodulin; LRR prote 98.6 6.2E-09 2.1E-13 101.0 -0.8 121 38-167 29-164 (185)
414 3sg8_A APH(2'')-ID; antibiotic 98.5 2.5E-08 8.6E-13 105.0 3.3 191 275-488 25-288 (304)
415 3rw6_A Nuclear RNA export fact 98.5 1.3E-08 4.4E-13 103.8 0.2 93 574-668 136-237 (267)
416 3rw6_A Nuclear RNA export fact 98.5 8.1E-09 2.8E-13 105.3 -1.4 106 584-692 121-237 (267)
417 1io0_A Tropomodulin; LRR prote 98.5 1.1E-08 3.7E-13 99.3 -0.7 43 598-640 31-78 (185)
418 3r70_A Aminoglycoside phosphot 98.0 9.6E-06 3.3E-10 85.7 9.6 138 271-436 38-239 (320)
419 3d1u_A Putative fructosamine-3 97.8 6.9E-05 2.4E-09 77.7 11.0 76 274-359 19-97 (288)
420 3tdw_A Gentamicin resistance p 97.8 5.6E-05 1.9E-09 79.2 10.1 138 275-435 24-225 (306)
421 3e4g_A ATP synthase subunit S, 97.8 5.8E-06 2E-10 78.1 2.2 34 628-661 62-95 (176)
422 4gkh_A Aminoglycoside 3'-phosp 97.6 0.00012 4.2E-09 75.0 9.6 136 277-434 31-223 (272)
423 3e4g_A ATP synthase subunit S, 97.6 2.2E-05 7.5E-10 74.1 2.7 87 675-762 61-154 (176)
424 3ovc_A Hygromycin-B 4-O-kinase 97.4 0.00034 1.2E-08 75.0 9.9 76 274-360 45-122 (362)
425 1pgv_A TMD-1, tropomodulin TMD 97.4 2.8E-05 9.5E-10 74.9 0.6 117 41-167 37-170 (197)
426 1pgv_A TMD-1, tropomodulin TMD 97.4 6.3E-05 2.2E-09 72.4 2.8 111 18-128 38-168 (197)
427 2olc_A MTR kinase, methylthior 97.3 0.00053 1.8E-08 74.6 9.8 76 275-357 35-120 (397)
428 3ats_A Putative uncharacterize 97.3 0.00061 2.1E-08 72.9 9.2 84 276-361 26-122 (357)
429 3rfe_A Platelet glycoprotein I 97.1 0.00067 2.3E-08 60.9 6.0 56 679-736 12-68 (130)
430 3rfe_A Platelet glycoprotein I 97.1 0.00076 2.6E-08 60.5 6.3 57 702-761 11-68 (130)
431 2q83_A YTAA protein; 2635576, 96.7 0.009 3.1E-07 63.0 12.2 44 391-434 199-252 (346)
432 3jr1_A Putative fructosamine-3 96.7 0.0076 2.6E-07 62.8 10.9 76 274-359 40-118 (312)
433 3f7w_A Putative fructosamine-3 96.6 0.0044 1.5E-07 63.9 8.8 78 271-358 16-96 (288)
434 3dxq_A Choline/ethanolamine ki 96.4 0.0054 1.8E-07 63.7 8.0 71 272-356 20-92 (301)
435 2pyw_A Uncharacterized protein 96.1 0.018 6.1E-07 62.9 10.2 80 403-484 231-313 (420)
436 3feg_A Choline/ethanolamine ki 95.5 0.037 1.3E-06 59.2 9.2 150 275-434 55-254 (379)
437 2qg7_A Ethanolamine kinase PV0 95.4 0.055 1.9E-06 59.5 10.6 75 275-359 113-188 (458)
438 1nw1_A Choline kinase (49.2 KD 95.3 0.029 9.9E-07 61.3 8.1 72 276-358 79-158 (429)
439 3csv_A Aminoglycoside phosphot 95.1 0.11 3.6E-06 54.6 11.2 33 403-435 182-218 (333)
440 2ppq_A HSK, HK, homoserine kin 94.7 0.051 1.7E-06 56.7 7.6 171 260-434 7-217 (322)
441 3c5i_A Choline kinase; choline 94.5 0.056 1.9E-06 57.7 7.3 73 276-358 39-120 (369)
442 1zyl_A Hypothetical protein YI 93.9 0.62 2.1E-05 48.4 13.9 79 276-358 32-113 (328)
443 3i1a_A Spectinomycin phosphotr 93.3 0.43 1.5E-05 50.1 11.4 33 403-435 205-237 (339)
444 3f2s_A CK, chetk-alpha, cholin 91.9 0.29 1E-05 52.5 7.9 32 403-434 243-280 (401)
445 3mes_A Choline kinase; malaria 90.0 0.32 1.1E-05 52.7 5.9 74 276-359 76-157 (424)
446 2l2t_A Receptor tyrosine-prote 87.4 0.4 1.4E-05 33.0 2.8 30 218-247 12-41 (44)
447 2ks1_B Epidermal growth factor 87.0 0.47 1.6E-05 32.8 3.0 29 218-246 13-41 (44)
448 2yle_A Protein spire homolog 1 86.0 0.96 3.3E-05 43.6 5.7 103 358-487 34-136 (229)
449 4ann_A ESSB; membrane protein, 80.9 3.8 0.00013 39.4 7.5 88 377-493 76-163 (215)
450 3g15_A CK, chetk-alpha, cholin 79.1 2.5 8.6E-05 45.3 6.5 29 406-434 246-280 (401)
451 3cxl_A N-chimerin; SH2, RHO-GA 74.6 0.45 1.5E-05 52.3 -1.2 61 274-337 146-214 (463)
452 2lz0_A Uncharacterized protein 68.2 14 0.00048 30.6 7.0 45 639-684 8-52 (100)
453 2lz0_A Uncharacterized protein 67.9 13 0.00044 30.8 6.7 49 660-709 5-53 (100)
454 2jwa_A Receptor tyrosine-prote 62.6 7.5 0.00026 26.7 3.3 24 219-243 14-37 (44)
455 4ano_A ESSB; membrane protein, 61.4 8.8 0.0003 36.9 5.0 83 378-489 81-164 (219)
456 2k1k_A Ephrin type-A receptor 48.6 12 0.0004 25.0 2.4 15 228-242 23-37 (38)
457 2l8s_A Integrin alpha-1; trans 28.2 34 0.0012 24.6 2.3 31 216-246 10-40 (54)
458 2l9u_A Receptor tyrosine-prote 24.3 86 0.0029 19.9 3.3 22 224-245 14-35 (40)
459 1iij_A ERBB-2 receptor protein 22.0 19 0.00065 23.4 0.0 8 236-243 27-34 (35)
460 2knc_A Integrin alpha-IIB; tra 20.1 51 0.0017 23.8 1.9 30 216-245 13-42 (54)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.6e-52 Score=502.40 Aligned_cols=183 Identities=33% Similarity=0.489 Sum_probs=159.5
Q ss_pred CEEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCc
Q 041249 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQ 80 (789)
Q Consensus 1 ~l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 80 (789)
+|+|++|++++.+|. +.+++|++|+|++|++++.+|. ++.+++|++|+|++|++++.+|..++.+++|++|+|++|+
T Consensus 182 ~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 258 (768)
T 3rgz_A 182 HLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQ 258 (768)
T ss_dssp EEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSC
T ss_pred EEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCc
Confidence 489999999987764 8899999999999999988887 9999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCCCCCcCCccccCC-cccccccccCCCCC-----------ccceeecCCcccCCCchh
Q 041249 81 FRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSC-IKLEILEMQGNVFQ-----------GLTILDLSRNKLSGEIPE 148 (789)
Q Consensus 81 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l-~~L~~l~l~~N~~~-----------~l~~l~ls~N~l~~~~p~ 148 (789)
+++.+|.. .+++|++|++++|+++|.+|..+... ++|++|++++|++. .|+.|+|++|.++|.+|.
T Consensus 259 l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~ 336 (768)
T 3rgz_A 259 FVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 336 (768)
T ss_dssp CEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCH
T ss_pred ccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCH
Confidence 99888765 88999999999999999999988775 99999999999764 389999999999988886
Q ss_pred h-hcCcccccEEecccCCCCCCCCCc-cccc-CCccccccCCC
Q 041249 149 F-LVGLKVIENLNLSYNDLEGMVPTE-GVFK-NASAISVLGNN 188 (789)
Q Consensus 149 ~-~~~~~~l~~l~ls~N~~~~~~~~~-~~~~-~~~~~~~~~n~ 188 (789)
. +..+++|+.|++++|++++.+|.. .... .+..+.+.+|.
T Consensus 337 ~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~ 379 (768)
T 3rgz_A 337 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 379 (768)
T ss_dssp HHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSE
T ss_pred HHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCC
Confidence 6 899999999999999999777764 2233 66666666664
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.2e-50 Score=486.15 Aligned_cols=480 Identities=30% Similarity=0.457 Sum_probs=395.9
Q ss_pred CEEcCCCCCCccCCcC---ccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEcc
Q 041249 1 ILALDSNRLSGNIPPS---IGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLS 77 (789)
Q Consensus 1 ~l~l~~n~~~~~~p~~---~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 77 (789)
+|||++|++++..|.. ++++++|++|++++|.+++..|. +.+++|++|+|++|++++.+|. ++.+++|++|+|+
T Consensus 155 ~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls 231 (768)
T 3rgz_A 155 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDIS 231 (768)
T ss_dssp EEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECC
T ss_pred EEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECc
Confidence 4899999999999987 89999999999999999987764 8899999999999999988887 9999999999999
Q ss_pred CCcCCCCCcccccCCCCCCEEeccCCCCCCcCCccccCCcccccccccCCCCC------------ccceeecCCcccCCC
Q 041249 78 RNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQ------------GLTILDLSRNKLSGE 145 (789)
Q Consensus 78 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~------------~l~~l~ls~N~l~~~ 145 (789)
+|++++.+|..++.+++|++|++++|++++.+|.. .+++|++|++++|++. .|+.|+|++|.+++.
T Consensus 232 ~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~ 309 (768)
T 3rgz_A 232 GNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309 (768)
T ss_dssp SSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEEC
T ss_pred CCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCc
Confidence 99999999999999999999999999999888876 8999999999999763 489999999999999
Q ss_pred chhhhcCcccccEEecccCCCCCCCCCc--ccccCCccccccCCCccccCCCcCCCCCCCCCCCcccccceeeeEeehhh
Q 041249 146 IPEFLVGLKVIENLNLSYNDLEGMVPTE--GVFKNASAISVLGNNKLCGGISEFKLPPCGLKKSTEWRLTFELKLVIAIV 223 (789)
Q Consensus 146 ~p~~~~~~~~l~~l~ls~N~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 223 (789)
+|..+..+++|+.|++++|.+++.+|.. ..++.++.+.+.+|.... ..+..
T Consensus 310 ~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~-~~p~~-------------------------- 362 (768)
T 3rgz_A 310 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSG-ELPES-------------------------- 362 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEE-CCCTT--------------------------
T ss_pred cchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCc-cccHH--------------------------
Confidence 9999999999999999999999777753 456677777777774310 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCccccccccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEe
Q 041249 224 SGLMGLALTLSISFLCWVRKRKEQSNPNSLINSLLNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVF 303 (789)
Q Consensus 224 ~~~~~v~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~ 303 (789)
+..
T Consensus 363 --------------------------------------l~~--------------------------------------- 365 (768)
T 3rgz_A 363 --------------------------------------LTN--------------------------------------- 365 (768)
T ss_dssp --------------------------------------HHH---------------------------------------
T ss_pred --------------------------------------HHh---------------------------------------
Confidence 000
Q ss_pred ccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHH
Q 041249 304 NLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQ 383 (789)
Q Consensus 304 ~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~ 383 (789)
+. +++.. +.. .+. . +.-+.... +... .+
T Consensus 366 -----------------l~----~~L~~-L~L------s~N-~--l~~~~~~~------~~~~-----------~~---- 393 (768)
T 3rgz_A 366 -----------------LS----ASLLT-LDL------SSN-N--FSGPILPN------LCQN-----------PK---- 393 (768)
T ss_dssp -----------------HT----TTCSE-EEC------CSS-E--EEEECCTT------TTCS-----------TT----
T ss_pred -----------------hh----cCCcE-EEc------cCC-C--cCCCcChh------hhhc-----------cc----
Confidence 00 00000 000 000 0 00000000 0000 00
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCC
Q 041249 384 RLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSE 463 (789)
Q Consensus 384 ~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 463 (789)
..|++|+ +.+-. .
T Consensus 394 ---------~~L~~L~--------------------------L~~n~----------------l---------------- 406 (768)
T 3rgz_A 394 ---------NTLQELY--------------------------LQNNG----------------F---------------- 406 (768)
T ss_dssp ---------CCCCEEE--------------------------CCSSE----------------E----------------
T ss_pred ---------CCccEEE--------------------------CCCCc----------------c----------------
Confidence 0000000 00000 0
Q ss_pred cCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHH
Q 041249 464 VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIEC 543 (789)
Q Consensus 464 ~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (789)
+|..|
T Consensus 407 ------------------~~~~p--------------------------------------------------------- 411 (768)
T 3rgz_A 407 ------------------TGKIP--------------------------------------------------------- 411 (768)
T ss_dssp ------------------EEECC---------------------------------------------------------
T ss_pred ------------------ccccC---------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHhhccccceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccC
Q 041249 544 LISMLRIGSKAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNL 623 (789)
Q Consensus 544 ~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~ 623 (789)
.....|.+++.+++..+.+....+..+.++++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|..|
T Consensus 412 -----~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 486 (768)
T 3rgz_A 412 -----PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486 (768)
T ss_dssp -----GGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred -----HHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHH
Confidence 112356778899999999998999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccc--------
Q 041249 624 SSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTL-------- 695 (789)
Q Consensus 624 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-------- 695 (789)
.++++|++|+|++|++++.+|.+|..+++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|..+
T Consensus 487 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~ 566 (768)
T 3rgz_A 487 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 566 (768)
T ss_dssp GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBC
T ss_pred hcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhh
Confidence 999999999999999999999999999999999999999999999999999999999999999987777543
Q ss_pred --------------------------------------------------------------cCCCCCCeeeccCccccc
Q 041249 696 --------------------------------------------------------------SKLKNLVILYLGVNRLSG 713 (789)
Q Consensus 696 --------------------------------------------------------------~~l~~L~~L~Ls~N~l~~ 713 (789)
..+++|+.|||++|++++
T Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g 646 (768)
T 3rgz_A 567 ANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSG 646 (768)
T ss_dssp CSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBS
T ss_pred hhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccc
Confidence 345789999999999999
Q ss_pred cCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 714 IVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 714 ~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
.+|..|+.+++|+.|+|++|+++|.+|..+. ++++|+.|||++|++++.+|..+..+++|+.|++++|+++|.||
T Consensus 647 ~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~-~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 647 YIPKEIGSMPYLFILNLGHNDISGSIPDEVG-DLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGG-GCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred cCCHHHhccccCCEEeCcCCccCCCCChHHh-CCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 9999999999999999999999999999998 89999999999999999999999999999999999999999998
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.8e-46 Score=437.51 Aligned_cols=454 Identities=19% Similarity=0.172 Sum_probs=369.7
Q ss_pred CEEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCc
Q 041249 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQ 80 (789)
Q Consensus 1 ~l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 80 (789)
+|||++|++++..|.+|+++++|++|+|++|++++..|++|+.+++|++|+|++|++++..|..|+.+++|++|+|++|+
T Consensus 37 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 116 (606)
T 3t6q_A 37 CLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTG 116 (606)
T ss_dssp EEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSC
T ss_pred EEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccC
Confidence 48999999999889999999999999999999999899999999999999999999998889999999999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCCCCCcCCccccCCcccccccccCCCCCc-----------cc--eeecCCcccCCCch
Q 041249 81 FRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQG-----------LT--ILDLSRNKLSGEIP 147 (789)
Q Consensus 81 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~-----------l~--~l~ls~N~l~~~~p 147 (789)
+++..|..++.+++|++|++++|++++..+..+..+++|++|++++|++.+ |+ .|++++|.+++..|
T Consensus 117 i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~ 196 (606)
T 3t6q_A 117 ISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEP 196 (606)
T ss_dssp CSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECT
T ss_pred cccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccCh
Confidence 997667889999999999999999997544455569999999999998754 56 79999999998777
Q ss_pred hhhcCc---------------------------------------------------ccccEEecccCCCCCCCCCc-cc
Q 041249 148 EFLVGL---------------------------------------------------KVIENLNLSYNDLEGMVPTE-GV 175 (789)
Q Consensus 148 ~~~~~~---------------------------------------------------~~l~~l~ls~N~~~~~~~~~-~~ 175 (789)
..+... .+|+.|++++|.+++.++.. ..
T Consensus 197 ~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~ 276 (606)
T 3t6q_A 197 GAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHC 276 (606)
T ss_dssp TTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTT
T ss_pred hHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhcc
Confidence 654321 16889999999999887763 44
Q ss_pred ccCCccccccCCCccccCCCcCCCCCCCCCCCcccccceeeeEeehhhHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 041249 176 FKNASAISVLGNNKLCGGISEFKLPPCGLKKSTEWRLTFELKLVIAIVSGLMGLALTLSISFLCWVRKRKEQSNPNSLIN 255 (789)
Q Consensus 176 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~k~~~~~~~~~~ 255 (789)
++.+..+.+.+|.... .+.. ...
T Consensus 277 l~~L~~L~l~~n~l~~--lp~~-l~~------------------------------------------------------ 299 (606)
T 3t6q_A 277 FSGLQELDLTATHLSE--LPSG-LVG------------------------------------------------------ 299 (606)
T ss_dssp CTTCSEEECTTSCCSC--CCSS-CCS------------------------------------------------------
T ss_pred ccCCCEEeccCCccCC--CChh-hcc------------------------------------------------------
Confidence 5566666666663210 0000 000
Q ss_pred ccccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeee
Q 041249 256 SLLNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTA 335 (789)
Q Consensus 256 ~~~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 335 (789)
.+++
T Consensus 300 ----------------------------------------------------------------------l~~L------ 303 (606)
T 3t6q_A 300 ----------------------------------------------------------------------LSTL------ 303 (606)
T ss_dssp ----------------------------------------------------------------------CTTC------
T ss_pred ----------------------------------------------------------------------cccC------
Confidence 0000
Q ss_pred eccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCc
Q 041249 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSN 415 (789)
Q Consensus 336 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~N 415 (789)
.+|+-.+
T Consensus 304 ------------------------------------------------------------~~L~l~~------------- 310 (606)
T 3t6q_A 304 ------------------------------------------------------------KKLVLSA------------- 310 (606)
T ss_dssp ------------------------------------------------------------CEEECTT-------------
T ss_pred ------------------------------------------------------------CEEECcc-------------
Confidence 0000000
Q ss_pred eecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCc
Q 041249 416 ILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDM 495 (789)
Q Consensus 416 ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~ 495 (789)
+ ++.+ ..|
T Consensus 311 -----n---~l~~-------------------------~~~--------------------------------------- 318 (606)
T 3t6q_A 311 -----N---KFEN-------------------------LCQ--------------------------------------- 318 (606)
T ss_dssp -----C---CCSB-------------------------GGG---------------------------------------
T ss_pred -----C---CcCc-------------------------Cch---------------------------------------
Confidence 0 0000 000
Q ss_pred cHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc-cc
Q 041249 496 NLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL-PH 574 (789)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l-~~ 574 (789)
.....+.+++.+++..+......+ ..
T Consensus 319 -----------------------------------------------------~~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (606)
T 3t6q_A 319 -----------------------------------------------------ISASNFPSLTHLSIKGNTKRLELGTGC 345 (606)
T ss_dssp -----------------------------------------------------GCGGGCTTCSEEECCSCSSCCBCCSST
T ss_pred -----------------------------------------------------hhhhccCcCCEEECCCCCcccccchhh
Confidence 001123445566666666654443 34
Q ss_pred ccCccccchhcccCCcccccC--cccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCc-ccCCCC
Q 041249 575 IGNLSFLKILNLENNSFTHEI--PSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPS-DFGSLS 651 (789)
Q Consensus 575 l~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~ 651 (789)
+..+++|++|++++|++++.. +..|..+++|++|++++|++++..|..|..+++|++|++++|++.+..+. .|..++
T Consensus 346 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 425 (606)
T 3t6q_A 346 LENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLH 425 (606)
T ss_dssp TTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCT
T ss_pred hhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcc
Confidence 888999999999999999776 77899999999999999999989999999999999999999999877655 489999
Q ss_pred CCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCcc---CCccccCCCCCCeeeccCccccccCCccccCCCCccEE
Q 041249 652 KIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGS---IPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEF 728 (789)
Q Consensus 652 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 728 (789)
+|++|++++|++++..|..|..+++|++|+|++|++++. .+..+..+++|++|+|++|++++..|.+|..+++|++|
T Consensus 426 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 505 (606)
T 3t6q_A 426 LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505 (606)
T ss_dssp TCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEE
Confidence 999999999999999999999999999999999999862 34679999999999999999999889999999999999
Q ss_pred EccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCccc
Q 041249 729 DVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGE 787 (789)
Q Consensus 729 ~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 787 (789)
+|++|++++..|..+. .+++| +|+|++|++++.+|..+..+++|+.|++++|++++.
T Consensus 506 ~Ls~N~l~~~~~~~l~-~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 506 DLSHNRLTSSSIEALS-HLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp ECCSSCCCGGGGGGGT-TCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred ECCCCccCcCChhHhC-ccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 9999999966666665 89999 999999999998999999999999999999999874
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1e-45 Score=432.65 Aligned_cols=503 Identities=17% Similarity=0.147 Sum_probs=376.7
Q ss_pred EEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcC
Q 041249 2 LALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQF 81 (789)
Q Consensus 2 l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 81 (789)
+|+++..++ .+|..+.. .+++|+|++|.|++..|..|+++++|++|+|++|++++..|..|..+++|++|+|++|++
T Consensus 17 ~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 17 YNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp EECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 688999999 88988854 799999999999988899999999999999999999988899999999999999999999
Q ss_pred CCCCcccccCCCCCCEEeccCCCCCCcCCccccCCcccccccccCCCCCc-----------cceeecCCcccCCCchhhh
Q 041249 82 RGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQG-----------LTILDLSRNKLSGEIPEFL 150 (789)
Q Consensus 82 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~-----------l~~l~ls~N~l~~~~p~~~ 150 (789)
++..|..|+.+++|++|++++|++++..|..++++++|++|++++|++.+ |+.|++++|.+++..|..+
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 98889999999999999999999997778889999999999999998753 7899999999998889999
Q ss_pred cCccccc--EEecccCCCCCCCCCcccccCCccccccCCCccccCCCcCCCCCCCCCCCcccccceeeeEeehhhHHHHH
Q 041249 151 VGLKVIE--NLNLSYNDLEGMVPTEGVFKNASAISVLGNNKLCGGISEFKLPPCGLKKSTEWRLTFELKLVIAIVSGLMG 228 (789)
Q Consensus 151 ~~~~~l~--~l~ls~N~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 228 (789)
..+++|+ .|++++|++++.+|.......+..+.+.+|...
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~-------------------------------------- 215 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNL-------------------------------------- 215 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCH--------------------------------------
T ss_pred hhhcccceeEEecCCCccCccChhHhhhccccccccCCchhH--------------------------------------
Confidence 9999998 899999999988776532223333333333100
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCccccccccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc
Q 041249 229 LALTLSISFLCWVRKRKEQSNPNSLINSLLNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH 308 (789)
Q Consensus 229 v~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~ 308 (789)
T Consensus 216 -------------------------------------------------------------------------------- 215 (606)
T 3t6q_A 216 -------------------------------------------------------------------------------- 215 (606)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHHHhcCCCCccceee-eeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHH
Q 041249 309 RASRSFIAECRALRSIRHRNLVKVF-TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNI 387 (789)
Q Consensus 309 ~~~~~~~~e~~~l~~l~h~niv~l~-~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i 387 (789)
. ..+..+.+..+..+. +.+.... ...+...
T Consensus 216 ------~---~~~~~l~~~~l~~l~~~~~~~~~---------------~~~i~~~------------------------- 246 (606)
T 3t6q_A 216 ------L---VIFKGLKNSTIQSLWLGTFEDMD---------------DEDISPA------------------------- 246 (606)
T ss_dssp ------H---HHHHHTTTCEEEEEECCCCTTSC---------------CCCCCGG-------------------------
T ss_pred ------H---HHhhhccccchhheechhhcccc---------------ccccChh-------------------------
Confidence 0 000000000000000 0000000 0000000
Q ss_pred HHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCcc
Q 041249 388 AIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN 467 (789)
Q Consensus 388 ~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k 467 (789)
...++..+. +.+-++.-.+ +.+ ..|+.+.....=..
T Consensus 247 ---~~~~l~~~~------L~~L~l~~n~----------l~~-------------------------~~~~~~~~l~~L~~ 282 (606)
T 3t6q_A 247 ---VFEGLCEMS------VESINLQKHY----------FFN-------------------------ISSNTFHCFSGLQE 282 (606)
T ss_dssp ---GGGGGGGSE------EEEEECTTCC----------CSS-------------------------CCTTTTTTCTTCSE
T ss_pred ---HhchhhcCc------eeEEEeecCc----------cCc-------------------------cCHHHhccccCCCE
Confidence 000000000 0000000000 000 00000000000000
Q ss_pred ccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHH
Q 041249 468 GDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISM 547 (789)
Q Consensus 468 ~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 547 (789)
- ++-+-.+. .+
T Consensus 283 L------------------------------------------~l~~n~l~---------------------------~l 293 (606)
T 3t6q_A 283 L------------------------------------------DLTATHLS---------------------------EL 293 (606)
T ss_dssp E------------------------------------------ECTTSCCS---------------------------CC
T ss_pred E------------------------------------------eccCCccC---------------------------CC
Confidence 0 00000000 00
Q ss_pred HhhccccceeeEeccCcccccccccccccCccccchhcccCCcccccCcc-cccCccceeeecccCCCCccCC--CccCc
Q 041249 548 LRIGSKAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPS-EIGRLRRLQVPDLNNNSIGGEI--PVNLS 624 (789)
Q Consensus 548 ~~i~~~c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~i~~~~--p~~~~ 624 (789)
.+-...+.+++.+++..+.+....+..+..+++|++|++++|.+.+.+|. .|..+++|++|++++|.+++.. +..+.
T Consensus 294 p~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 373 (606)
T 3t6q_A 294 PSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373 (606)
T ss_dssp CSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTT
T ss_pred ChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcc
Confidence 01123467788999999998887788899999999999999999866655 4899999999999999999766 78899
Q ss_pred CCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcC-CCCCCCCCEEEccCCcCCccCCccccCCCCCCe
Q 041249 625 SCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPP-LGNLSSLRKISLAINNLAGSIPFTLSKLKNLVI 703 (789)
Q Consensus 625 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 703 (789)
.+++|++|++++|++.+..|..|..+++|++|++++|++++..+.. |..+++|++|++++|++++..|..|..+++|++
T Consensus 374 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 453 (606)
T 3t6q_A 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQH 453 (606)
T ss_dssp TCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCE
T ss_pred cCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCE
Confidence 9999999999999999888999999999999999999998776654 899999999999999999888999999999999
Q ss_pred eeccCcccccc---CCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeecc
Q 041249 704 LYLGVNRLSGI---VPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQAL 780 (789)
Q Consensus 704 L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 780 (789)
|++++|++++. .+..+..+++|++|+|++|++++..|..+. .+++|++|+|++|++++..|..+..+++| .|+++
T Consensus 454 L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~ 531 (606)
T 3t6q_A 454 LNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFT-SLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLA 531 (606)
T ss_dssp EECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECC
T ss_pred EECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhc-cccCCCEEECCCCccCcCChhHhCccccc-EEECc
Confidence 99999999862 346799999999999999999955555554 89999999999999999999999999999 99999
Q ss_pred CCcCcccCC
Q 041249 781 NNKLTGEVP 789 (789)
Q Consensus 781 ~N~l~~~~P 789 (789)
+|++++.+|
T Consensus 532 ~N~l~~~~~ 540 (606)
T 3t6q_A 532 SNHISIILP 540 (606)
T ss_dssp SSCCCCCCG
T ss_pred CCcccccCH
Confidence 999998765
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.1e-45 Score=434.52 Aligned_cols=231 Identities=23% Similarity=0.232 Sum_probs=186.6
Q ss_pred eeeEeccCcccccccccccccCccccchhcccCCcccccCc-ccccCccceeeecccCCCCccCCCccCcCCCCCcEEEc
Q 041249 556 KVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIP-SEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGL 634 (789)
Q Consensus 556 ~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l 634 (789)
.++.+++..+.+....+..+..+++|++|+|++|++++.+| ..|.++++|++|++++|++++..+..|..+++|++|++
T Consensus 382 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l 461 (680)
T 1ziw_A 382 PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLML 461 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEEC
T ss_pred cCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchh
Confidence 56677777777777777778888888888888888876555 56888888888888888888777888888888888888
Q ss_pred ccCCCC--CCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCC--------ccccCCCCCCee
Q 041249 635 AKNQLM--GKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIP--------FTLSKLKNLVIL 704 (789)
Q Consensus 635 ~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--------~~~~~l~~L~~L 704 (789)
++|.+. +..|..|.++++|+.|+|++|+|+++.+..|.++++|++|+|++|++++..+ ..|.++++|++|
T Consensus 462 ~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L 541 (680)
T 1ziw_A 462 RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHIL 541 (680)
T ss_dssp TTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEE
T ss_pred ccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEE
Confidence 888876 4577788888888888888888887777788888888888888888875422 237788888888
Q ss_pred eccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCccccc-CCCCCCeeeccCCc
Q 041249 705 YLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSIS-NASKLEVFQALNNK 783 (789)
Q Consensus 705 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~ 783 (789)
+|++|+|+...+..|..+++|+.|+|++|+|+ .+|...|.++++|+.|+|++|+|++..+..+. .+++|+.|++++|+
T Consensus 542 ~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~ 620 (680)
T 1ziw_A 542 NLESNGFDEIPVEVFKDLFELKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNP 620 (680)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCC
T ss_pred ECCCCCCCCCCHHHcccccCcceeECCCCCCC-cCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCC
Confidence 88888888555567888888888888888888 78877776788888888888888887777777 67888888888888
Q ss_pred Cccc
Q 041249 784 LTGE 787 (789)
Q Consensus 784 l~~~ 787 (789)
+.+.
T Consensus 621 ~~c~ 624 (680)
T 1ziw_A 621 FDCT 624 (680)
T ss_dssp CCBC
T ss_pred cccC
Confidence 8763
No 6
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.1e-45 Score=427.60 Aligned_cols=229 Identities=20% Similarity=0.169 Sum_probs=194.6
Q ss_pred cceeeEeccCcccccccccccccCccccchhcccCCccccc--CcccccCccceeeecccCCCCccCCCccCcCCCCCcE
Q 041249 554 AQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHE--IPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIR 631 (789)
Q Consensus 554 c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~ 631 (789)
+.+++.+++..+...... .+..+++|++|++++|++++. .|..+..+++|++|++++|.++ .+|..|..+++|++
T Consensus 327 l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~ 403 (606)
T 3vq2_A 327 LPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQH 403 (606)
T ss_dssp CSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCE
T ss_pred CCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCe
Confidence 344555555555433222 567889999999999999876 3788899999999999999998 46688999999999
Q ss_pred EEcccCCCCCCCC-cccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCc-cCCccccCCCCCCeeeccCc
Q 041249 632 IGLAKNQLMGKIP-SDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAG-SIPFTLSKLKNLVILYLGVN 709 (789)
Q Consensus 632 L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N 709 (789)
|++++|++.+..| ..|..+++|++|++++|++++..|..|.++++|++|+|++|++++ .+|..|..+++|++|+|++|
T Consensus 404 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 483 (606)
T 3vq2_A 404 LDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKC 483 (606)
T ss_dssp EECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred eECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCC
Confidence 9999999997777 678899999999999999998899999999999999999999987 47888999999999999999
Q ss_pred cccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCC-CCCeeeccCCcCccc
Q 041249 710 RLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNAS-KLEVFQALNNKLTGE 787 (789)
Q Consensus 710 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~ 787 (789)
++++..|..|..+++|++|+|++|++++.+|..+. .+++|++|+|++|+|+ .+|..+..++ +|+.|++++|++.+.
T Consensus 484 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 484 QLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYN-QLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTT-TCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred cCCccChhhhcccccCCEEECCCCcCCCcCHHHcc-CCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccC
Confidence 99988889999999999999999999965566665 8999999999999999 5677788887 599999999999874
No 7
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.9e-47 Score=404.16 Aligned_cols=268 Identities=19% Similarity=0.252 Sum_probs=210.6
Q ss_pred CCCCCCcccccCCccEEEEEEc-----CCceEEEEEEeccccc-hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 271 GFSSANLIGTGSFGSVYKGVLD-----EGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 271 ~f~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
++...+.||+|+||+||+|.+. .+++.||||+++.... ...++|.+|++++++++|||||+++|+|....
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~---- 102 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ---- 102 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC----
Confidence 3455678999999999999974 3568999999975533 34578999999999999999999999998765
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCcc------ccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDE------VDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL 418 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill 418 (789)
..++|||||++|+|.+++........ .......++|.+++.|+.|||.||+|||+.+ ||||||||+|||+
T Consensus 103 -~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl 178 (308)
T 4gt4_A 103 -PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLV 178 (308)
T ss_dssp -SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred -EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEE
Confidence 78999999999999999965422111 0112346999999999999999999999988 9999999999999
Q ss_pred CCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccH
Q 041249 419 DEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNL 497 (789)
Q Consensus 419 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~ 497 (789)
++++++||+|||+|+...............||+.|||||++.++.|+.|+|||||||++|||+| |+.||..... ..+
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~ 256 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDV 256 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHH
T ss_pred CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHH
Confidence 9999999999999997755443333445679999999999999999999999999999999998 8999974311 122
Q ss_pred HHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccccccC
Q 041249 498 HNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPHIGN 577 (789)
Q Consensus 498 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~l~~ 577 (789)
...+...... + ....|...+.+++..|++.+|.+||++.++...+.++++
T Consensus 257 ~~~i~~~~~~-------~-----------------------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 257 VEMIRNRQVL-------P-----------------------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp HHHHHTTCCC-------C-----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred HHHHHcCCCC-------C-----------------------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 2222211000 0 011455567789999999999999999998777777665
Q ss_pred c
Q 041249 578 L 578 (789)
Q Consensus 578 l 578 (789)
+
T Consensus 307 l 307 (308)
T 4gt4_A 307 L 307 (308)
T ss_dssp -
T ss_pred C
Confidence 5
No 8
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.3e-44 Score=427.04 Aligned_cols=211 Identities=20% Similarity=0.204 Sum_probs=155.5
Q ss_pred ccceeeEeccCccccccccc-ccccCccccchhcccCCcccccCcccccCccceeeecccCCCCc--cCCCccCcCCCCC
Q 041249 553 KAQKVTILDLESLKLAGSIL-PHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIG--GEIPVNLSSCSNL 629 (789)
Q Consensus 553 ~c~~l~~l~l~s~~~~~~~l-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~--~~~p~~~~~l~~L 629 (789)
.+.+++.+++..+.+....+ ..+.++++|++|++++|++++..+..|..+++|++|++++|.++ +..|..|.++++|
T Consensus 403 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L 482 (680)
T 1ziw_A 403 WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482 (680)
T ss_dssp TCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTC
T ss_pred CCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCC
Confidence 45567777777777765443 56777888888888888887777777888888888888888776 4567777888888
Q ss_pred cEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCC--------cCCCCCCCCCEEEccCCcCCccCCccccCCCCC
Q 041249 630 IRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIP--------PPLGNLSSLRKISLAINNLAGSIPFTLSKLKNL 701 (789)
Q Consensus 630 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 701 (789)
++|++++|+|++..+..|.++++|++|+|++|++++..+ ..|.++++|++|+|++|+|+.+.+..|.++++|
T Consensus 483 ~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 562 (680)
T 1ziw_A 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCc
Confidence 888888888887667777788888888888888775422 236777888888888888875555567888888
Q ss_pred CeeeccCccccccCCccccCCCCccEEEccCCcccccCCccccc-CCCCccEEEccCCcccccC
Q 041249 702 VILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGF-TLQNLQYFSIGTNRITGAI 764 (789)
Q Consensus 702 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~-~l~~L~~L~L~~N~l~~~~ 764 (789)
++|+|++|+|++..+..|..+++|+.|+|++|+|+ .++...+. .+++|+.|+|++|++...-
T Consensus 563 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 563 KIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLIT-SVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCC-BCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred ceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCC-ccChhHhcccccccCEEEccCCCcccCC
Confidence 88888888888666666777788888888888887 55555443 4677888888888776543
No 9
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.3e-47 Score=400.68 Aligned_cols=264 Identities=22% Similarity=0.330 Sum_probs=207.9
Q ss_pred cCCCCCCcccccCCccEEEEEEc-----CCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLD-----EGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
++|...+.||+|+||+||+|++. .+++.||||+++.......++|.+|++++++++|||||+++|+|.+.+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC----
Confidence 56778889999999999999985 357889999998776667788999999999999999999999998766
Q ss_pred ceEEEEeeccCCCChhhhccCCCCC---ccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNRE---DEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE 421 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~ 421 (789)
..++|||||++|+|.++++..... .........++|.+++.|+.|||.||+|||+.+ ||||||||+|||++++
T Consensus 89 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 89 -PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGEN 164 (299)
T ss_dssp -SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred -EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCC
Confidence 789999999999999999754110 001123567999999999999999999999988 9999999999999999
Q ss_pred CceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHH
Q 041249 422 MVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNF 500 (789)
Q Consensus 422 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~ 500 (789)
+++||+|||+|+...............||+.|||||++.+..|+.|+|||||||++|||+| |+.||..... ..+...
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~~ 242 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVIEC 242 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHH
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHH
Confidence 9999999999997655443333334569999999999999999999999999999999999 9999974211 111121
Q ss_pred HHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 501 ARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 501 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
+...... .....|..++.+++..|++.+|..||++..+...+.
T Consensus 243 i~~~~~~------------------------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 243 ITQGRVL------------------------------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHHTCCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHcCCCC------------------------------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1111000 001134556778999999999999999988754443
No 10
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.3e-46 Score=401.56 Aligned_cols=267 Identities=24% Similarity=0.335 Sum_probs=203.1
Q ss_pred cCCCCCCcccccCCccEEEEEEcC-----CceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDE-----GRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
++|...+.||+|+||+||+|+++. +++.||||+++.......+.|.+|++++++++|||||+++|+|.+..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR---- 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----
Confidence 466777899999999999999753 57899999998776666788999999999999999999999998765
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCcc-----ccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecC
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDE-----VDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD 419 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~-----~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~ 419 (789)
..++|||||++|+|.++++....... .......++|.+++.|+.|||.||+|||+.+ ||||||||+|||++
T Consensus 117 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 117 -PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVG 192 (329)
T ss_dssp -SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEE
T ss_pred -EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEEC
Confidence 78999999999999999976522110 1123457999999999999999999999887 99999999999999
Q ss_pred CCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHH
Q 041249 420 EEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLH 498 (789)
Q Consensus 420 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~ 498 (789)
+++++||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||..... ..+.
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~ 270 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--TEAI 270 (329)
T ss_dssp TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--HHHH
T ss_pred CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--HHHH
Confidence 999999999999998765554444445679999999999999999999999999999999999 8999974211 1111
Q ss_pred HHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccccccc
Q 041249 499 NFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPHIG 576 (789)
Q Consensus 499 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~l~ 576 (789)
..+..... + .....|..++.+++..|++.+|.+||++.++...+..+.
T Consensus 271 ~~i~~g~~--------~----------------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 271 DCITQGRE--------L----------------------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp HHHHHTCC--------C----------------------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHcCCC--------C----------------------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 22211110 0 011134556778999999999999999998866555443
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.2e-44 Score=421.36 Aligned_cols=227 Identities=17% Similarity=0.171 Sum_probs=203.7
Q ss_pred ccceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccC--CCccCcCCCCCc
Q 041249 553 KAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGE--IPVNLSSCSNLI 630 (789)
Q Consensus 553 ~c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~--~p~~~~~l~~L~ 630 (789)
.+.+++.+++..+.+ ...+ .+ .+++|++|++++|+..+.. .+..+++|++|++++|++++. .|..+..+++|+
T Consensus 305 ~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~ 379 (606)
T 3vq2_A 305 KHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLR 379 (606)
T ss_dssp TTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCC
T ss_pred ccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCccc
Confidence 456788888888888 4444 56 9999999999999665433 678999999999999999966 388899999999
Q ss_pred EEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCC-cCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCc
Q 041249 631 RIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIP-PPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVN 709 (789)
Q Consensus 631 ~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 709 (789)
+|++++|.+++ +|..|..+++|+.|++++|++++..| ..|.++++|++|++++|++++..|..|.++++|++|++++|
T Consensus 380 ~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 458 (606)
T 3vq2_A 380 HLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGN 458 (606)
T ss_dssp EEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTC
T ss_pred EeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCC
Confidence 99999999984 66889999999999999999998887 78999999999999999999999999999999999999999
Q ss_pred cccc-cCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcc
Q 041249 710 RLSG-IVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTG 786 (789)
Q Consensus 710 ~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 786 (789)
++++ .+|..|..+++|+.|+|++|++++..|..+. ++++|++|+|++|++++..|..|..+++|+.|++++|+++.
T Consensus 459 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 535 (606)
T 3vq2_A 459 SFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFD-TLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535 (606)
T ss_dssp EEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC
T ss_pred cCCCcchHHhhccCCCCCEEECCCCcCCccChhhhc-ccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc
Confidence 9997 4799999999999999999999955555554 89999999999999999889999999999999999999985
No 12
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-46 Score=394.93 Aligned_cols=258 Identities=26% Similarity=0.352 Sum_probs=197.4
Q ss_pred HhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 267 NATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 267 ~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
+..++|...+.||+|+||+||+|++. ..||||+++... ....+.|.+|++++++++|||||+++|+|...
T Consensus 33 i~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~----- 104 (307)
T 3omv_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD----- 104 (307)
T ss_dssp CCTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred EcHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC-----
Confidence 44567888899999999999999986 359999987543 34457899999999999999999999998542
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++|||||++|+|.+++... ...+++.+++.|+.|||.||+|||+.+ ||||||||+|||+++++++
T Consensus 105 -~~~iVmEy~~gGsL~~~l~~~---------~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~ 171 (307)
T 3omv_A 105 -NLAIVTQWCEGSSLYKHLHVQ---------ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTV 171 (307)
T ss_dssp -SCEEEEECCSSCBHHHHHHTS---------CCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEE
T ss_pred -eEEEEEEcCCCCCHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcE
Confidence 579999999999999999643 346899999999999999999999987 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCC---CCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHH
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL---GSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~ 501 (789)
||+|||+|+...............||+.|||||++. .+.|+.|+|||||||++|||+||+.||...... ..+...+
T Consensus 172 Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-~~~~~~~ 250 (307)
T 3omv_A 172 KIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-DQIIFMV 250 (307)
T ss_dssp EECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHHHHHH
T ss_pred EEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-HHHHHHH
Confidence 999999999876544333445567999999999985 356999999999999999999999999732111 1111111
Q ss_pred HHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 502 RMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 502 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
.... .+|.+.. ...+|...+.+++..|++.++.+||++.++...+
T Consensus 251 ~~~~-------~~p~~~~-------------------~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L 295 (307)
T 3omv_A 251 GRGY-------ASPDLSK-------------------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI 295 (307)
T ss_dssp HTTC-------CCCCSTT-------------------SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHH
T ss_pred hcCC-------CCCCccc-------------------ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 1111 1111110 1124556677899999999999999998875443
No 13
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3e-44 Score=435.08 Aligned_cols=167 Identities=22% Similarity=0.196 Sum_probs=133.1
Q ss_pred EEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCC-cccccCCCCCCEEEccCCc
Q 041249 2 LALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTI-PPQLMGLTSLVALDLSRNQ 80 (789)
Q Consensus 2 l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~ 80 (789)
.|+++++++ .+|. -.++|++|+|++|.|++..|..|+.+++|++|+|++|.+.+.+ |..|..+++|++|+|++|.
T Consensus 9 ~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 9 AFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCC
T ss_pred EEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCc
Confidence 577888888 6676 3567888888888888777888888888888888888666555 6678888888888888888
Q ss_pred CCCCCcccccCCCCCCEEeccCCCCCCcCCcc--ccCCcccccccccCCCCCc------------cceeecCCcccCCCc
Q 041249 81 FRGSFPTEVGNLINLETLTVSGNILQGEIPST--LGSCIKLEILEMQGNVFQG------------LTILDLSRNKLSGEI 146 (789)
Q Consensus 81 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~l~l~~N~~~~------------l~~l~ls~N~l~~~~ 146 (789)
+++..|..|+.+++|++|+|++|++++.+|.. +.++++|++|+|++|.+.+ |+.|+|++|.+++..
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCC
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeC
Confidence 88777888888888888888888888766654 7888888888888886632 778888888888888
Q ss_pred hhhhcCc--ccccEEecccCCCCCCCCC
Q 041249 147 PEFLVGL--KVIENLNLSYNDLEGMVPT 172 (789)
Q Consensus 147 p~~~~~~--~~l~~l~ls~N~~~~~~~~ 172 (789)
|..+..+ ++|+.|++++|.+++..+.
T Consensus 165 ~~~l~~l~~~~L~~L~L~~n~l~~~~~~ 192 (844)
T 3j0a_A 165 EHELEPLQGKTLSFFSLAANSLYSRVSV 192 (844)
T ss_dssp SGGGHHHHHCSSCCCEECCSBSCCCCCC
T ss_pred HHHcccccCCccceEECCCCcccccccc
Confidence 8888777 7888899999988876554
No 14
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.6e-44 Score=423.30 Aligned_cols=205 Identities=22% Similarity=0.255 Sum_probs=125.5
Q ss_pred cccCccc-cchhcccCCcccccCcccccCcc--ceeeecccCCCCccCCCccCc-------CCCCCcEEEcccCCCCCCC
Q 041249 574 HIGNLSF-LKILNLENNSFTHEIPSEIGRLR--RLQVPDLNNNSIGGEIPVNLS-------SCSNLIRIGLAKNQLMGKI 643 (789)
Q Consensus 574 ~l~~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~Ls~N~i~~~~p~~~~-------~l~~L~~L~l~~N~l~~~~ 643 (789)
.+..+++ |++|+|++|+++ .+|..+..++ +|++|++++|+|++..|..|. .+++|++|+|++|+|+...
T Consensus 371 ~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp 449 (636)
T 4eco_A 371 NFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFP 449 (636)
T ss_dssp TSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCC
T ss_pred hhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCC
Confidence 3445556 666666666666 5565555543 666666666666666666666 5566666666666666333
Q ss_pred CcccCCCCCCcEEEccCCCCCccCCcCCCCCC-------CCCEEEccCCcCCccCCcccc--CCCCCCeeeccCcccccc
Q 041249 644 PSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLS-------SLRKISLAINNLAGSIPFTLS--KLKNLVILYLGVNRLSGI 714 (789)
Q Consensus 644 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-------~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~ 714 (789)
+..|..+++|++|+|++|+++.+.+..+..+. +|++|+|++|+|+ .+|..+. .+++|+.|+|++|+|++
T Consensus 450 ~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~- 527 (636)
T 4eco_A 450 KELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK- 527 (636)
T ss_dssp THHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-
T ss_pred HHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-
Confidence 33445566666666666666633333333222 6666666666666 5555554 66666666666666664
Q ss_pred CCccccCCCCccEEEc------cCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCc
Q 041249 715 VPSSIFNISSIAEFDV------GENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLT 785 (789)
Q Consensus 715 ~p~~~~~l~~L~~L~L------s~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 785 (789)
+|..+..+++|+.|+| ++|++.+.+|..+. .+++|++|+|++|+|+ .+|..+. ++|+.|++++|+++
T Consensus 528 ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 528 FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGIT-LCPSLTQLQIGSNDIR-KVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGG-GCSSCCEEECCSSCCC-BCCSCCC--TTCCEEECCSCTTC
T ss_pred cChhhhcCCCCCEEECCCCcccccCcccccChHHHh-cCCCCCEEECCCCcCC-ccCHhHh--CcCCEEECcCCCCc
Confidence 6666666666666666 34555656666665 5666666666666663 4555544 56666666666554
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-43 Score=407.12 Aligned_cols=209 Identities=17% Similarity=0.216 Sum_probs=164.2
Q ss_pred CccccchhcccCCcccccCcccccCccceeeecccCCCCccCC--CccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCc
Q 041249 577 NLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEI--PVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIE 654 (789)
Q Consensus 577 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~--p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 654 (789)
.+++|++|++++|.+.+..+. ..+++|++|++++|.+++.. |..+.++++|++|++++|++.+..+ .|..+++|+
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~ 399 (570)
T 2z63_A 323 KLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLE 399 (570)
T ss_dssp BCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCC
T ss_pred cccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCC
Confidence 567788888888887765554 67788888888888887553 6677788888888888888875444 477888888
Q ss_pred EEEccCCCCCccCC-cCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCcccc-ccCCccccCCCCccEEEccC
Q 041249 655 VLSLGFNNLIGSIP-PPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLS-GIVPSSIFNISSIAEFDVGE 732 (789)
Q Consensus 655 ~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~ 732 (789)
+|++++|++++..| ..|.++++|++|+|++|++++..|..|.++++|++|++++|+++ +.+|..|..+++|++|+|++
T Consensus 400 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~ 479 (570)
T 2z63_A 400 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479 (570)
T ss_dssp EEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCC
Confidence 88888888876655 46778888888888888888778888888888888888888887 46788888888888888888
Q ss_pred CcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 733 NKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 733 N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
|++++..|..+. .+++|++|+|++|++++..+..|..+++|+.|++++|+++|..|
T Consensus 480 n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 480 CQLEQLSPTAFN-SLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp SCCCEECTTTTT-TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CccccCChhhhh-cccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 888855455554 78888888888888887777778888888888888888887654
No 16
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.4e-43 Score=406.38 Aligned_cols=478 Identities=17% Similarity=0.188 Sum_probs=337.6
Q ss_pred EEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcC
Q 041249 2 LALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQF 81 (789)
Q Consensus 2 l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 81 (789)
.|+++|+++ .+|+.+. ++|++|+|++|++++..|..|+.+++|++|+|++|+|++..|..|+.+++|++|+|++|++
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 477888888 7777764 6888999999998887788888889999999999999877778888889999999999998
Q ss_pred CCCCcccccCCCCCCEEeccCCCCCC-cCCccccCCcccccccccCCCC------------CccceeecCCcccCCCchh
Q 041249 82 RGSFPTEVGNLINLETLTVSGNILQG-EIPSTLGSCIKLEILEMQGNVF------------QGLTILDLSRNKLSGEIPE 148 (789)
Q Consensus 82 ~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~l~l~~N~~------------~~l~~l~ls~N~l~~~~p~ 148 (789)
++..|..|+.+++|++|++++|++++ .+|..++++++|++|++++|++ +.|+.|++++|.+++.+|.
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 86666678888899999999998886 3567888888899999888862 2378889999999888888
Q ss_pred hhcCcccccEEecccCCCCCCCCCc-ccccCCccccccCCCccccCCCcCCC-CCCCCCCCcccccceeeeEeehhhHHH
Q 041249 149 FLVGLKVIENLNLSYNDLEGMVPTE-GVFKNASAISVLGNNKLCGGISEFKL-PPCGLKKSTEWRLTFELKLVIAIVSGL 226 (789)
Q Consensus 149 ~~~~~~~l~~l~ls~N~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~ 226 (789)
.+..+++|+.|++++|.+...++.. +.++.+..+.+.+|........+... ..+.
T Consensus 167 ~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~----------------------- 223 (549)
T 2z81_A 167 SLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSS----------------------- 223 (549)
T ss_dssp TTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCC-----------------------
T ss_pred hhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhh-----------------------
Confidence 8888888999999988876544322 23556666777776532110000000 0000
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCccccccccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc
Q 041249 227 MGLALTLSISFLCWVRKRKEQSNPNSLINSLLNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH 306 (789)
Q Consensus 227 ~~v~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~ 306 (789)
.+|.+...
T Consensus 224 ------------------------------------------------------------------------~L~~L~l~ 231 (549)
T 2z81_A 224 ------------------------------------------------------------------------PMKKLAFR 231 (549)
T ss_dssp ------------------------------------------------------------------------CCCEEEEE
T ss_pred ------------------------------------------------------------------------cccceecc
Confidence 00000000
Q ss_pred cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHH
Q 041249 307 HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386 (789)
Q Consensus 307 ~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~ 386 (789)
... +...
T Consensus 232 ~n~---------------------------------------------------------------------l~~~---- 238 (549)
T 2z81_A 232 GSV---------------------------------------------------------------------LTDE---- 238 (549)
T ss_dssp SCE---------------------------------------------------------------------EEHH----
T ss_pred ccc---------------------------------------------------------------------cchh----
Confidence 000 0000
Q ss_pred HHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCc
Q 041249 387 IAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVST 466 (789)
Q Consensus 387 i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 466 (789)
....+.+.+.++.... ...+.+-... +... .++
T Consensus 239 ~~~~l~~~~~~~~~L~--------------------~l~l~~~~~~----------------~~~~-~~~---------- 271 (549)
T 2z81_A 239 SFNELLKLLRYILELS--------------------EVEFDDCTLN----------------GLGD-FNP---------- 271 (549)
T ss_dssp HHHHHHGGGGGCTTCC--------------------EEEEESCEEE----------------CCSC-CCC----------
T ss_pred HHHHHHHHhhhhcccc--------------------cccccccccc----------------cccc-ccc----------
Confidence 0001111111111000 0000000000 0000 000
Q ss_pred cccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHH
Q 041249 467 NGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLIS 546 (789)
Q Consensus 467 k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (789)
. .
T Consensus 272 --------------------~-----------------------------~----------------------------- 273 (549)
T 2z81_A 272 --------------------S-----------------------------E----------------------------- 273 (549)
T ss_dssp --------------------C-----------------------------T-----------------------------
T ss_pred --------------------c-----------------------------c-----------------------------
Confidence 0 0
Q ss_pred HHhhccccceeeEeccCccccccc-----ccccccCccccchhcccCCcccccCcccc-cCccceeeecccCCCCccCCC
Q 041249 547 MLRIGSKAQKVTILDLESLKLAGS-----ILPHIGNLSFLKILNLENNSFTHEIPSEI-GRLRRLQVPDLNNNSIGGEIP 620 (789)
Q Consensus 547 l~~i~~~c~~l~~l~l~s~~~~~~-----~l~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~i~~~~p 620 (789)
.+....+.+++.+++..+.+... ....+...++|++|++++|+++ .+|..+ ..+++|++|+|++|++++..|
T Consensus 274 -~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~ 351 (549)
T 2z81_A 274 -SDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYL 351 (549)
T ss_dssp -TTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHH
T ss_pred -hhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccc
Confidence 01123344555555544443221 1112234578999999999998 566655 689999999999999998764
Q ss_pred ---ccCcCCCCCcEEEcccCCCCCCCC--cccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccc
Q 041249 621 ---VNLSSCSNLIRIGLAKNQLMGKIP--SDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTL 695 (789)
Q Consensus 621 ---~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 695 (789)
..++.+++|++|++++|+|++..+ ..+..+++|++|++++|+++ .+|..+..+++|++|+|++|+|+ .+|..+
T Consensus 352 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~ 429 (549)
T 2z81_A 352 KNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI 429 (549)
T ss_dssp HHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS
T ss_pred cchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchh
Confidence 347889999999999999985432 45889999999999999999 67888999999999999999998 455544
Q ss_pred cCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCC
Q 041249 696 SKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLE 775 (789)
Q Consensus 696 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 775 (789)
. ++|++|+|++|+|++.+ ..+++|++|+|++|+|+ .+|... .+++|++|+|++|+|++.+|..+..+++|+
T Consensus 430 ~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 500 (549)
T 2z81_A 430 P--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPDAS--LFPVLLVMKISRNQLKSVPDGIFDRLTSLQ 500 (549)
T ss_dssp C--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCGG--GCTTCCEEECCSSCCCCCCTTGGGGCTTCC
T ss_pred c--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCCcc--cCccCCEEecCCCccCCcCHHHHhcCcccC
Confidence 3 58999999999999643 57899999999999999 999843 699999999999999998899999999999
Q ss_pred eeeccCCcCcccC
Q 041249 776 VFQALNNKLTGEV 788 (789)
Q Consensus 776 ~L~l~~N~l~~~~ 788 (789)
.|++++|+++|..
T Consensus 501 ~L~l~~N~~~~~~ 513 (549)
T 2z81_A 501 KIWLHTNPWDCSC 513 (549)
T ss_dssp EEECCSSCBCCCH
T ss_pred EEEecCCCccCCC
Confidence 9999999998864
No 17
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=406.77 Aligned_cols=452 Identities=19% Similarity=0.204 Sum_probs=351.5
Q ss_pred CEEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCc
Q 041249 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQ 80 (789)
Q Consensus 1 ~l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 80 (789)
+|||++|+++ .+|..+. ++|++|+|++|.+++..|+.|..+++|++|+|++|+|++..|..|+.+++|++|+|++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 4899999999 7898886 899999999999998888899999999999999999998889999999999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCCCCC-cCCccccCCcccccccccCCCCCc--------c--ceeecCCccc--CCCch
Q 041249 81 FRGSFPTEVGNLINLETLTVSGNILQG-EIPSTLGSCIKLEILEMQGNVFQG--------L--TILDLSRNKL--SGEIP 147 (789)
Q Consensus 81 l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~l~l~~N~~~~--------l--~~l~ls~N~l--~~~~p 147 (789)
++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++.+ | +.|++++|.+ ++..|
T Consensus 81 l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~ 157 (520)
T 2z7x_B 81 LV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDP 157 (520)
T ss_dssp CC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCT
T ss_pred ee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeeccccccccccc
Confidence 99 78876 89999999999999997 478999999999999999998863 6 9999999999 88889
Q ss_pred hhhcCcc-cccEEecccCCCCCCCCCc--ccccCCccccccCCCccccCCCcCCCCCCCCCCCcccccceeeeEeehhhH
Q 041249 148 EFLVGLK-VIENLNLSYNDLEGMVPTE--GVFKNASAISVLGNNKLCGGISEFKLPPCGLKKSTEWRLTFELKLVIAIVS 224 (789)
Q Consensus 148 ~~~~~~~-~l~~l~ls~N~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 224 (789)
..+..+. ....+++++|.+.+.++.. ..+..+..+.+.+|.... .|
T Consensus 158 ~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~---------~~---------------------- 206 (520)
T 2z7x_B 158 EGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDN---------KC---------------------- 206 (520)
T ss_dssp TTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTT---------TT----------------------
T ss_pred ccccccccceEEEEeccCcchhhhhhhhhhcccceeecccccccccc---------cc----------------------
Confidence 8888776 4556889999998876653 223444444454442100 00
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCccccccccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEec
Q 041249 225 GLMGLALTLSISFLCWVRKRKEQSNPNSLINSLLNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFN 304 (789)
Q Consensus 225 ~~~~v~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~ 304 (789)
T Consensus 207 -------------------------------------------------------------------------------- 206 (520)
T 2z7x_B 207 -------------------------------------------------------------------------------- 206 (520)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHH
Q 041249 305 LHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR 384 (789)
Q Consensus 305 ~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~ 384 (789)
..+...+..+..+ +++..+ .+ .... ++..
T Consensus 207 -------~~~~~~~~~l~~l--~~L~~L---------------~l--~~~~-----------------------l~~~-- 235 (520)
T 2z7x_B 207 -------SYFLSILAKLQTN--PKLSNL---------------TL--NNIE-----------------------TTWN-- 235 (520)
T ss_dssp -------HHHHHHHHGGGGC--TTCCEE---------------EE--EEEE-----------------------EEHH--
T ss_pred -------ceeecchhhhccc--cchhhc---------------cc--cccc-----------------------cCHH--
Confidence 0000000000000 000000 00 0000 0000
Q ss_pred HHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCc
Q 041249 385 LNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV 464 (789)
Q Consensus 385 ~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 464 (789)
T Consensus 236 -------------------------------------------------------------------------------- 235 (520)
T 2z7x_B 236 -------------------------------------------------------------------------------- 235 (520)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHH
Q 041249 465 STNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECL 544 (789)
Q Consensus 465 ~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (789)
..
T Consensus 236 ------------------------------------------------------------------------------~~ 237 (520)
T 2z7x_B 236 ------------------------------------------------------------------------------SF 237 (520)
T ss_dssp ------------------------------------------------------------------------------HH
T ss_pred ------------------------------------------------------------------------------HH
Confidence 00
Q ss_pred HHHHhhccccceeeEeccCcccccccccccc-----cCccccchhcccCCcccccCc-ccccCc---cceeeecccCCCC
Q 041249 545 ISMLRIGSKAQKVTILDLESLKLAGSILPHI-----GNLSFLKILNLENNSFTHEIP-SEIGRL---RRLQVPDLNNNSI 615 (789)
Q Consensus 545 ~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~l-----~~l~~L~~L~L~~N~l~~~~~-~~~~~l---~~L~~L~Ls~N~i 615 (789)
..+.. ...+.+++.+++..+.+.+..+..+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+
T Consensus 238 ~~~~~-~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l 314 (520)
T 2z7x_B 238 IRILQ-LVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRM 314 (520)
T ss_dssp HHHHH-HHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCC
T ss_pred HHHHH-HhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcc
Confidence 00000 0012355666666676666666666 8899999999999999 355 555555 6799999999998
Q ss_pred ccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCc--cCCcCCCCCCCCCEEEccCCcCCccCCc
Q 041249 616 GGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIG--SIPPPLGNLSSLRKISLAINNLAGSIPF 693 (789)
Q Consensus 616 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 693 (789)
.... .+..+++|++|++++|++++..|..|..+++|++|+|++|++++ ..|..|..+++|++|+|++|++++.+|.
T Consensus 315 ~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~ 392 (520)
T 2z7x_B 315 VHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK 392 (520)
T ss_dssp CCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGG
T ss_pred cccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccccc
Confidence 7432 23688999999999999998889999999999999999999996 4567799999999999999999974555
Q ss_pred -cccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCC
Q 041249 694 -TLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNAS 772 (789)
Q Consensus 694 -~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 772 (789)
.|..+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..++ .+++|++|+|++|+|++..+..+..++
T Consensus 393 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~-~l~~L~~L~L~~N~l~~l~~~~~~~l~ 468 (520)
T 2z7x_B 393 GDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV-KLEALQELNVASNQLKSVPDGIFDRLT 468 (520)
T ss_dssp CSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG-GCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred chhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh-cCCCCCEEECCCCcCCccCHHHhccCC
Confidence 589999999999999999988877664 79999999999999 9999998 899999999999999954444589999
Q ss_pred CCCeeeccCCcCccc
Q 041249 773 KLEVFQALNNKLTGE 787 (789)
Q Consensus 773 ~L~~L~l~~N~l~~~ 787 (789)
+|+.|++++|++++.
T Consensus 469 ~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 469 SLQKIWLHTNPWDCS 483 (520)
T ss_dssp TCCEEECCSSCBCCC
T ss_pred cccEEECcCCCCccc
Confidence 999999999999875
No 18
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8.2e-45 Score=381.23 Aligned_cols=249 Identities=19% Similarity=0.281 Sum_probs=206.5
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
.++|...+.||+|+||+||+|+...+++.||||+++.. .....+.+.+|++++++++|||||++++++.+.+
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~----- 105 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE----- 105 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----
Confidence 36799999999999999999999999999999999643 2334577999999999999999999999998766
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++... ..+++.++..|+.||+.||+|||+++ ||||||||+|||++.++++|
T Consensus 106 ~~yivmEy~~gG~L~~~i~~~----------~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vK 172 (311)
T 4aw0_A 106 KLYFGLSYAKNGELLKYIRKI----------GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQ 172 (311)
T ss_dssp EEEEEECCCTTEEHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEE
Confidence 899999999999999999643 56899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
|+|||+|+...............||+.|||||++.+..|+.++||||+||++|||++|+.||... +..+..+...
T Consensus 173 l~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~ 247 (311)
T 4aw0_A 173 ITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-----NEGLIFAKII 247 (311)
T ss_dssp ECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHH
T ss_pred EEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHH
Confidence 99999999887655444455678999999999999989999999999999999999999999732 1222222111
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLA 568 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~ 568 (789)
... ..+.. ....++.+++.+|.+.++..|++..+.
T Consensus 248 ~~~------~~~p~----------------------~~s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 248 KLE------YDFPE----------------------KFFPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp HTC------CCCCT----------------------TCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred cCC------CCCCc----------------------ccCHHHHHHHHHHccCCHhHCcChHHH
Confidence 100 00000 112234577889999999999998875
No 19
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-44 Score=377.36 Aligned_cols=252 Identities=23% Similarity=0.316 Sum_probs=196.8
Q ss_pred CCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEEE
Q 041249 273 SSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALV 350 (789)
Q Consensus 273 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 350 (789)
...+.||+|+||+||+|.+..+++.||+|++.... ....+.|.+|++++++++|||||++++++.... .+....++|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEEEE
Confidence 44567999999999999999999999999996542 334567999999999999999999999986432 122357999
Q ss_pred eeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC-CCceeeCcc
Q 041249 351 YEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE-EMVSHVGDF 429 (789)
Q Consensus 351 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Df 429 (789)
||||.+|+|.+++... ..+++..+..|+.||+.||+|||+++ ++||||||||+|||++. ++.+||+||
T Consensus 108 mEy~~gg~L~~~l~~~----------~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DF 176 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF----------KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp EECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCT
T ss_pred EeCCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeC
Confidence 9999999999999643 56899999999999999999999874 46999999999999984 789999999
Q ss_pred cccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCch
Q 041249 430 GLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHV 509 (789)
Q Consensus 430 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 509 (789)
|+|+...... .....||+.|||||++. ++|+.++|||||||++|||+||+.||... .......+.......
T Consensus 177 Gla~~~~~~~----~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~----~~~~~~~~~i~~~~~ 247 (290)
T 3fpq_A 177 GLATLKRASF----AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC----QNAAQIYRRVTSGVK 247 (290)
T ss_dssp TGGGGCCTTS----BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC----SSHHHHHHHHTTTCC
T ss_pred cCCEeCCCCc----cCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCC----CcHHHHHHHHHcCCC
Confidence 9998754332 33567999999999875 46999999999999999999999999632 122222222111100
Q ss_pred hhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 510 MDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 510 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
....+ ..+..++.+++..|++.+|.+|++..+...+
T Consensus 248 ~~~~~--------------------------~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 248 PASFD--------------------------KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp CGGGG--------------------------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCCC--------------------------ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000 0122345678889999999999998876543
No 20
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.4e-45 Score=387.98 Aligned_cols=252 Identities=20% Similarity=0.256 Sum_probs=199.0
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
++|...+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++|||||++++++.+.. ..
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-----~~ 98 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG-----SL 98 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC-----EE
Confidence 57889999999999999999999999999999996542 334567999999999999999999999998766 89
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
|+||||+.+|+|.+++... ....+++.++..|+.||+.||+|||+.+ ||||||||+|||++.++++||+
T Consensus 99 yiVmEy~~gg~L~~~i~~~--------~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~ 167 (350)
T 4b9d_A 99 YIVMDYCEGGDLFKRINAQ--------KGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLG 167 (350)
T ss_dssp EEEEECCTTCBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEEC
T ss_pred EEEEeCCCCCcHHHHHHHc--------CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEc
Confidence 9999999999999999643 3356788999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCC
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPD 507 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 507 (789)
|||+|+...... .......||+.|||||++.+..|+.++|||||||++|||+||+.||... +..+.+......
T Consensus 168 DFGla~~~~~~~--~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~-----~~~~~~~~i~~~ 240 (350)
T 4b9d_A 168 DFGIARVLNSTV--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-----SMKNLVLKIISG 240 (350)
T ss_dssp STTEESCCCHHH--HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHT
T ss_pred ccccceeecCCc--ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHcC
Confidence 999999764322 1223456999999999999999999999999999999999999999732 222222211111
Q ss_pred chhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 508 HVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 508 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
... .+. ..+..++.+++..|++.++.+|++..+...+
T Consensus 241 ~~~-----~~~----------------------~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 241 SFP-----PVS----------------------LHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CCC-----CCC----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCC-----CCC----------------------ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 000 0123345678889999999999998876443
No 21
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.2e-44 Score=383.70 Aligned_cols=251 Identities=21% Similarity=0.250 Sum_probs=206.8
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKAL 349 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 349 (789)
+.|+..+.||+|+||+||+|++..+++.||||+++.......+.+.+|++++++++|||||++++++...+ ..|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-----~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-----EEEE
Confidence 46888899999999999999999999999999998766666778899999999999999999999998766 8999
Q ss_pred EeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCcc
Q 041249 350 VYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDF 429 (789)
Q Consensus 350 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 429 (789)
||||+.+|+|.+++.. ..+++.++..|+.||+.||+|||+.+ ||||||||+|||++.++++||+||
T Consensus 149 vmEy~~gg~L~~~l~~-----------~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DF 214 (346)
T 4fih_A 149 VMEFLEGGALTDIVTH-----------TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDF 214 (346)
T ss_dssp EECCCTTEEHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecC
Confidence 9999999999999853 35899999999999999999999998 999999999999999999999999
Q ss_pred cccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCch
Q 041249 430 GLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHV 509 (789)
Q Consensus 430 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 509 (789)
|+|+....... ......||+.|||||++....|+.++|||||||++|||++|+.||.... .......+....+
T Consensus 215 Gla~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~--- 287 (346)
T 4fih_A 215 GFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLP--- 287 (346)
T ss_dssp TTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSSC---
T ss_pred cCceecCCCCC--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCC---
Confidence 99998765432 2334679999999999999999999999999999999999999997321 1111111221111
Q ss_pred hhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 510 MDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 510 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
+.+. .......++.+++..|++.++..|++..++..+
T Consensus 288 -----~~~~--------------------~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 288 -----PRLK--------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -----CCCS--------------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----CCCC--------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1110 011223445678889999999999998877554
No 22
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-42 Score=414.33 Aligned_cols=220 Identities=19% Similarity=0.229 Sum_probs=158.7
Q ss_pred eeEeccCcccccccccccccCccc--cchhcccCCcccccCcccc---c--CccceeeecccCCCCccCCCcc-CcCCCC
Q 041249 557 VTILDLESLKLAGSILPHIGNLSF--LKILNLENNSFTHEIPSEI---G--RLRRLQVPDLNNNSIGGEIPVN-LSSCSN 628 (789)
Q Consensus 557 l~~l~l~s~~~~~~~l~~l~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~Ls~N~i~~~~p~~-~~~l~~ 628 (789)
++.+++..+.+. ..+..+..++. |+.|+|++|++++.+|... . .+.+|+.|+|++|+|+ .+|.. +..+++
T Consensus 621 L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~ 698 (876)
T 4ecn_A 621 VEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSP 698 (876)
T ss_dssp CCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCC
T ss_pred CCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCC
Confidence 555666666665 44556655544 8888888888877655422 2 3347888888888888 44544 457788
Q ss_pred CcEEEcccCCCCCCCCcc-cCCC-------CCCcEEEccCCCCCccCCcCCC--CCCCCCEEEccCCcCCccCCccccCC
Q 041249 629 LIRIGLAKNQLMGKIPSD-FGSL-------SKIEVLSLGFNNLIGSIPPPLG--NLSSLRKISLAINNLAGSIPFTLSKL 698 (789)
Q Consensus 629 L~~L~l~~N~l~~~~~~~-~~~l-------~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l 698 (789)
|+.|+|++|+|+ .+|.. +... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+.++
T Consensus 699 L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L 775 (876)
T 4ecn_A 699 ISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNS 775 (876)
T ss_dssp CSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGC
T ss_pred CCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcC
Confidence 888888888888 44443 3322 27888888888887 6677776 78888888888888885 67778888
Q ss_pred CCCCeeeccC------ccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCC
Q 041249 699 KNLVILYLGV------NRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNAS 772 (789)
Q Consensus 699 ~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 772 (789)
++|+.|+|++ |++.+.+|.+|..+++|+.|+|++|+| +.+|..++ ++|+.|+|++|++....+..+....
T Consensus 776 ~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~---~~L~~LdLs~N~l~~i~~~~~~~~~ 851 (876)
T 4ecn_A 776 SQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT---PQLYILDIADNPNISIDVTSVCPYI 851 (876)
T ss_dssp TTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC---SSSCEEECCSCTTCEEECGGGHHHH
T ss_pred CCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc---CCCCEEECCCCCCCccChHHccccc
Confidence 8888888866 777778888888888888888888888 48888754 5788888888888766666666655
Q ss_pred CCCeeeccCCcCc
Q 041249 773 KLEVFQALNNKLT 785 (789)
Q Consensus 773 ~L~~L~l~~N~l~ 785 (789)
.+..+.|..|++.
T Consensus 852 ~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 852 EAGMYVLLYDKTQ 864 (876)
T ss_dssp HTTCCEEECCTTS
T ss_pred cchheeecCCCcc
Confidence 6666666666543
No 23
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.9e-44 Score=388.05 Aligned_cols=276 Identities=21% Similarity=0.220 Sum_probs=215.6
Q ss_pred ccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCC-----ceEEEEEEeccccc-hhhHHHHHHHHHHhcCCC-Ccccee
Q 041249 260 LSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEG-----RTTVTVKVFNLHHH-RASRSFIAECRALRSIRH-RNLVKV 332 (789)
Q Consensus 260 ~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h-~niv~l 332 (789)
+...+++...++|...+.||+|+||+||+|.+... ++.||||+++.... ...+.|.+|++++.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 44456777788999999999999999999998643 46899999976543 345779999999999965 999999
Q ss_pred eeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCc------cccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCc
Q 041249 333 FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNRED------EVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPIT 406 (789)
Q Consensus 333 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~i 406 (789)
+|+|.... ...++|||||++|+|.++++...... ........+++.+++.|+.|||.||+|||+.+ |
T Consensus 134 ~g~~~~~~----~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---i 206 (353)
T 4ase_A 134 LGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---C 206 (353)
T ss_dssp EEEECCTT----SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---C
T ss_pred EEEEEecC----CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---e
Confidence 99986542 25799999999999999997542110 00112456899999999999999999999988 9
Q ss_pred eecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcC
Q 041249 407 THCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKK 485 (789)
Q Consensus 407 vH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~ 485 (789)
|||||||+|||+++++++||+|||+|+...............||+.|||||++.+..|+.|+|||||||++|||+| |+.
T Consensus 207 iHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~ 286 (353)
T 4ase_A 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 286 (353)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred ecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCC
Confidence 9999999999999999999999999998766554444556779999999999999999999999999999999998 999
Q ss_pred CCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcc
Q 041249 486 PSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESL 565 (789)
Q Consensus 486 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~ 565 (789)
||...... ..+...+....... . ...|..++.+++..|++.+|.+||++
T Consensus 287 Pf~~~~~~-~~~~~~i~~g~~~~--------~----------------------p~~~~~~~~~li~~c~~~dP~~RPt~ 335 (353)
T 4ase_A 287 PYPGVKID-EEFCRRLKEGTRMR--------A----------------------PDYTTPEMYQTMLDCWHGEPSQRPTF 335 (353)
T ss_dssp SSTTCCCS-HHHHHHHHHTCCCC--------C----------------------CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCCCHH-HHHHHHHHcCCCCC--------C----------------------CccCCHHHHHHHHHHcCcChhHCcCH
Confidence 99743211 12222222211110 0 11234556788899999999999999
Q ss_pred cccccccc
Q 041249 566 KLAGSILP 573 (789)
Q Consensus 566 ~~~~~~l~ 573 (789)
.++..++.
T Consensus 336 ~eil~~L~ 343 (353)
T 4ase_A 336 SELVEHLG 343 (353)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88755443
No 24
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=417.71 Aligned_cols=233 Identities=24% Similarity=0.218 Sum_probs=187.8
Q ss_pred cceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEE
Q 041249 554 AQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIG 633 (789)
Q Consensus 554 c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ 633 (789)
+.+++.+++..+.+....+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|+|++..|..|.++++|++|+
T Consensus 265 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 344 (844)
T 3j0a_A 265 RSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYID 344 (844)
T ss_dssp TSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEE
T ss_pred cCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEE
Confidence 46788899999988888888899999999999999999988899999999999999999999988899999999999999
Q ss_pred cccCCCCCCCCcccCCCCCCcEEEccCCCCCccCC------------------c----------------------CCCC
Q 041249 634 LAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIP------------------P----------------------PLGN 673 (789)
Q Consensus 634 l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~------------------~----------------------~~~~ 673 (789)
+++|+|+...+..|.++++|++|+|++|.+++... . .+.+
T Consensus 345 L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~ 424 (844)
T 3j0a_A 345 LQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLR 424 (844)
T ss_dssp CCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTT
T ss_pred CCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhc
Confidence 99999998888889999999999999999874321 0 0225
Q ss_pred CCCCCEEEccCCcCCccCCc-cccCCCCCCeeeccCcccc-----ccCCccccCCCCccEEEccCCcccccCCcccccCC
Q 041249 674 LSSLRKISLAINNLAGSIPF-TLSKLKNLVILYLGVNRLS-----GIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTL 747 (789)
Q Consensus 674 l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l 747 (789)
+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|+|+ .+|...+.++
T Consensus 425 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l 503 (844)
T 3j0a_A 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLN-SLPPGVFSHL 503 (844)
T ss_dssp CTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHT-TCCTTSSSSC
T ss_pred CCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCccc-ccChhHccch
Confidence 56677777777777644332 3455677777777777776 344466778888888888888888 5555555588
Q ss_pred CCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 748 QNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 748 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
++|++|+|++|+|++..+..+. ++|+.|+|++|++++.+|
T Consensus 504 ~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~ 543 (844)
T 3j0a_A 504 TALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNP 543 (844)
T ss_dssp CSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCS
T ss_pred hhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCCh
Confidence 8888888888888877666665 788888888888888765
No 25
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.2e-43 Score=375.88 Aligned_cols=267 Identities=23% Similarity=0.263 Sum_probs=198.5
Q ss_pred CCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEEE
Q 041249 271 GFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALV 350 (789)
Q Consensus 271 ~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 350 (789)
+|...+.||+|+||+||+|++. |+.||||+++.... ....++.|+..+.+++|||||+++|+|..... .....++|
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~-~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCC-CceEEEEE
Confidence 4566789999999999999985 89999999964432 22334567777788999999999999976431 12257999
Q ss_pred eeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCC-----CCCceecCCCCCceecCCCCcee
Q 041249 351 YEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDC-----QPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 351 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~k 425 (789)
||||++|+|.++++.. .++|.++.+++.|+|.||+|||+.+ .++||||||||+|||++.++++|
T Consensus 80 ~Ey~~~gsL~~~l~~~-----------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~K 148 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY-----------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EECCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred ecCCCCCcHHHHHHhC-----------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEE
Confidence 9999999999999643 5899999999999999999999872 44699999999999999999999
Q ss_pred eCcccccccCCCCCCc--cceeeecccccccCcccCCCC------CcCccccchhhHHHHHHHHHhcCCCCccccC----
Q 041249 426 VGDFGLARFLPPTHVQ--TSSIGVKGSIGYIAPEYGLGS------EVSTNGDVYSYGILMLELIIRKKPSDIMFEG---- 493 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~sfGvvl~elltG~~P~~~~~~~---- 493 (789)
|+|||+|+........ .......||+.|||||++.+. ++++|+|||||||++|||+||+.|+......
T Consensus 149 i~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~ 228 (303)
T 3hmm_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp ECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred EEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccc
Confidence 9999999887654422 223345799999999998654 4789999999999999999999887533211
Q ss_pred ------CccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccc
Q 041249 494 ------DMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKL 567 (789)
Q Consensus 494 ------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~ 567 (789)
......+.+..... ..+|.+.. .....++...+.+++..|++.+|..||++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~----~~rp~~p~-----------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 287 (303)
T 3hmm_A 229 YDLVPSDPSVEEMRKVVCEQ----KLRPNIPN-----------------RWQSCEALRVMAKIMRECWYANGAARLTALR 287 (303)
T ss_dssp TTTSCSSCCHHHHHHHHTTS----CCCCCCCG-----------------GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHH
T ss_pred hhcccccchHHHHHHHHhcc----cCCCCCCc-----------------cccchHHHHHHHHHHHHHcccCHhHCcCHHH
Confidence 11222222211111 11222211 1122356677889999999999999999988
Q ss_pred cccccc
Q 041249 568 AGSILP 573 (789)
Q Consensus 568 ~~~~l~ 573 (789)
+...+.
T Consensus 288 i~~~L~ 293 (303)
T 3hmm_A 288 IKKTLS 293 (303)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 755443
No 26
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5.4e-44 Score=379.63 Aligned_cols=248 Identities=21% Similarity=0.240 Sum_probs=197.1
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKAL 349 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 349 (789)
+.|...+.||+|+||+||+|++..+++.||||+++.... ..+|++++++++|||||++++++.+.. ..++
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~-----~~~i 127 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGP-----WVNI 127 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETT-----EEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECC-----EEEE
Confidence 457777889999999999999999999999999975432 246999999999999999999998766 8999
Q ss_pred EeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC-ceeeCc
Q 041249 350 VYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHVGD 428 (789)
Q Consensus 350 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~D 428 (789)
||||+++|+|.+++... ..+++.++..|+.||+.||+|||+++ ||||||||+|||++.++ ++||+|
T Consensus 128 vmEy~~gg~L~~~l~~~----------~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~D 194 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQM----------GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCD 194 (336)
T ss_dssp EECCCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECC
T ss_pred EEeccCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEee
Confidence 99999999999999643 46899999999999999999999988 99999999999999987 699999
Q ss_pred ccccccCCCCCCc---cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 429 FGLARFLPPTHVQ---TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 429 fgla~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
||+|+........ .......||+.|||||++.+..|+.++|||||||++|||+||+.||....... -+.......
T Consensus 195 FGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~~~- 272 (336)
T 4g3f_A 195 FGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKIASEP- 272 (336)
T ss_dssp CTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHHHHSC-
T ss_pred CCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHcCC-
Confidence 9999987654421 12234579999999999999999999999999999999999999997533221 111111110
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
....++ ...+...+.+++..|++.+|.+|++..+...
T Consensus 273 -~~~~~~---------------------------~~~~s~~~~~li~~~L~~dP~~R~sa~el~~ 309 (336)
T 4g3f_A 273 -PPIREI---------------------------PPSCAPLTAQAIQEGLRKEPVHRASAMELRR 309 (336)
T ss_dssp -CGGGGS---------------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -CCchhc---------------------------CccCCHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 000000 1123445667888999999999998877543
No 27
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=384.78 Aligned_cols=251 Identities=21% Similarity=0.250 Sum_probs=206.9
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKAL 349 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 349 (789)
+.|...+.||+|+||.||+|++..+++.||||+++.......+.+.+|++++++++|||||++++++...+ ..|+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-----~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECC-----EEEE
Confidence 46888999999999999999999999999999998776666778999999999999999999999998766 8999
Q ss_pred EeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCcc
Q 041249 350 VYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDF 429 (789)
Q Consensus 350 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 429 (789)
|||||.+|+|.+++.. ..+++.++..|+.||+.||+|||+++ ||||||||+|||++.++++||+||
T Consensus 226 VmEy~~gG~L~~~i~~-----------~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DF 291 (423)
T 4fie_A 226 VMEFLEGGALTDIVTH-----------TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDF 291 (423)
T ss_dssp EEECCTTEEHHHHHHH-----------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHhc-----------cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecC
Confidence 9999999999999853 35899999999999999999999998 999999999999999999999999
Q ss_pred cccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCch
Q 041249 430 GLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHV 509 (789)
Q Consensus 430 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 509 (789)
|+|+....... ......||+.|||||++.+..|+.++|||||||++|||++|+.||.... .......+....+
T Consensus 292 Gla~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~--- 364 (423)
T 4fie_A 292 GFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLP--- 364 (423)
T ss_dssp TTCEECCSSCC--CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCC---
T ss_pred ccceECCCCCc--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCC---
Confidence 99998755432 2334679999999999999999999999999999999999999996321 1111122221111
Q ss_pred hhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 510 MDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 510 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
+.+.. ...+...+.+++..|+..++..|++..+...+
T Consensus 365 -----~~~~~--------------------~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 365 -----PRLKN--------------------LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -----CCCSC--------------------TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----CCCcc--------------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11100 01123345678889999999999998877554
No 28
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.8e-43 Score=364.67 Aligned_cols=247 Identities=23% Similarity=0.290 Sum_probs=187.5
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
++|...+.||+|+||+||+|....+++.||||+++... ......+.+|++++++++||||+++++++...+ .
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~-----~ 87 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD-----E 87 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-----E
Confidence 58999999999999999999999999999999996442 233567999999999999999999999998766 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+ +|+|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++++||
T Consensus 88 ~~ivmEy~-~g~L~~~l~~~----------~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl 153 (275)
T 3hyh_A 88 IIMVIEYA-GNELFDYIVQR----------DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKI 153 (275)
T ss_dssp EEEEEECC-CEEHHHHHHHS----------CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEE
T ss_pred EEEEEeCC-CCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEE
Confidence 99999999 68999998644 46899999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCc-CccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV-STNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
+|||+|+...... ......||+.|||||++.+..+ +.++||||+||++|||+||+.||... +.....+...
T Consensus 154 ~DFGla~~~~~~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-----~~~~~~~~i~ 225 (275)
T 3hyh_A 154 ADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPVLFKNIS 225 (275)
T ss_dssp CCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHH
T ss_pred eecCCCeecCCCC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHH
Confidence 9999998765443 2234679999999999988776 68999999999999999999999732 2222222111
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
... +.+. ......+.++..+|.+.+|.+|++..++..+
T Consensus 226 ~~~------~~~p----------------------~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 226 NGV------YTLP----------------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HTC------CCCC----------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred cCC------CCCC----------------------CCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 000 0000 0112344578889999999999988876543
No 29
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=390.82 Aligned_cols=228 Identities=20% Similarity=0.245 Sum_probs=201.0
Q ss_pred ccceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEE
Q 041249 553 KAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRI 632 (789)
Q Consensus 553 ~c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L 632 (789)
.|.+++.+++..+.+. ..+..+..+ +|++|++++|+++ .+|. ..+++|++|++++|.+.+..+. ..+++|++|
T Consensus 280 ~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L 352 (570)
T 2z63_A 280 CLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFL 352 (570)
T ss_dssp GGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEE
T ss_pred CcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEE
Confidence 3556777888777766 456677778 9999999999999 5555 4788999999999999876655 788999999
Q ss_pred EcccCCCCCCC--CcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCC-ccccCCCCCCeeeccCc
Q 041249 633 GLAKNQLMGKI--PSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIP-FTLSKLKNLVILYLGVN 709 (789)
Q Consensus 633 ~l~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N 709 (789)
++++|++++.. +..+.++++|++|++++|++++..+. |..+++|++|++++|++++..| ..|.++++|++|++++|
T Consensus 353 ~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n 431 (570)
T 2z63_A 353 DLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 431 (570)
T ss_dssp ECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTS
T ss_pred eCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCC
Confidence 99999998654 67788999999999999999966555 9999999999999999997766 57899999999999999
Q ss_pred cccccCCccccCCCCccEEEccCCccc-ccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccC
Q 041249 710 RLSGIVPSSIFNISSIAEFDVGENKIQ-GNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEV 788 (789)
Q Consensus 710 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 788 (789)
++++..|..|..+++|++|+|++|.++ +.+|..+. .+++|++|+|++|++++..|..|..+++|+.|++++|++++.+
T Consensus 432 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 510 (570)
T 2z63_A 432 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT-ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510 (570)
T ss_dssp CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT-TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred cccccchhhhhcCCcCcEEECcCCcCccccchhhhh-cccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCC
Confidence 999999999999999999999999998 57887765 8999999999999999988999999999999999999999876
Q ss_pred C
Q 041249 789 P 789 (789)
Q Consensus 789 P 789 (789)
|
T Consensus 511 ~ 511 (570)
T 2z63_A 511 D 511 (570)
T ss_dssp T
T ss_pred H
Confidence 4
No 30
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7.6e-42 Score=400.66 Aligned_cols=223 Identities=21% Similarity=0.218 Sum_probs=193.1
Q ss_pred eccCcccccccccccccCccccchhcccCCcccccCcccccCccc-eeeecccCCCCccCCCccCcCCC--CCcEEEccc
Q 041249 560 LDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRR-LQVPDLNNNSIGGEIPVNLSSCS--NLIRIGLAK 636 (789)
Q Consensus 560 l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~Ls~N~i~~~~p~~~~~l~--~L~~L~l~~ 636 (789)
+++..+.+.+..+ .+..+++|++|+|++|+++ .+|..|..+++ |++|++++|+|+ .+|..+..++ +|++|++++
T Consensus 335 L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~ 411 (636)
T 4eco_A 335 LECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSY 411 (636)
T ss_dssp EECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCS
T ss_pred EeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcC
Confidence 3344444443344 6778899999999999999 78888999999 999999999999 7888888765 999999999
Q ss_pred CCCCCCCCcccC-------CCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCC-------CCC
Q 041249 637 NQLMGKIPSDFG-------SLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLK-------NLV 702 (789)
Q Consensus 637 N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-------~L~ 702 (789)
|++++..|..|. .+++|++|+|++|++++..+..+..+++|++|+|++|+|+...+..+..+. +|+
T Consensus 412 N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~ 491 (636)
T 4eco_A 412 NEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLT 491 (636)
T ss_dssp SCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCC
T ss_pred CcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCcc
Confidence 999999999888 888999999999999966555677799999999999999944444444433 999
Q ss_pred eeeccCccccccCCcccc--CCCCccEEEccCCcccccCCcccccCCCCccEEEc------cCCcccccCcccccCCCCC
Q 041249 703 ILYLGVNRLSGIVPSSIF--NISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSI------GTNRITGAIPPSISNASKL 774 (789)
Q Consensus 703 ~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L------~~N~l~~~~~~~~~~l~~L 774 (789)
+|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..++ .+++|++|+| ++|++.+.+|..+..+++|
T Consensus 492 ~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~-~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L 568 (636)
T 4eco_A 492 SIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPL-NSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSL 568 (636)
T ss_dssp EEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGG-GCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSC
T ss_pred EEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhh-cCCCCCEEECCCCcccccCcccccChHHHhcCCCC
Confidence 9999999999 7888887 99999999999999995 999988 8999999999 5688888999999999999
Q ss_pred CeeeccCCcCcccCC
Q 041249 775 EVFQALNNKLTGEVP 789 (789)
Q Consensus 775 ~~L~l~~N~l~~~~P 789 (789)
+.|+|++|++ +.+|
T Consensus 569 ~~L~Ls~N~l-~~ip 582 (636)
T 4eco_A 569 TQLQIGSNDI-RKVN 582 (636)
T ss_dssp CEEECCSSCC-CBCC
T ss_pred CEEECCCCcC-CccC
Confidence 9999999999 6665
No 31
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1e-40 Score=386.52 Aligned_cols=224 Identities=19% Similarity=0.244 Sum_probs=188.5
Q ss_pred eeeEeccCcccccccccccc-----cCccccchhcccCCcccccCc-ccccCc---cceeeecccCCCCccCCCccCcCC
Q 041249 556 KVTILDLESLKLAGSILPHI-----GNLSFLKILNLENNSFTHEIP-SEIGRL---RRLQVPDLNNNSIGGEIPVNLSSC 626 (789)
Q Consensus 556 ~l~~l~l~s~~~~~~~l~~l-----~~l~~L~~L~L~~N~l~~~~~-~~~~~l---~~L~~L~Ls~N~i~~~~p~~~~~l 626 (789)
+++.+++..+.+.+..+..+ .+++.|+.+++..|.+ .+| ..+..+ .+|++|++++|.+.... ....+
T Consensus 277 ~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l 352 (562)
T 3a79_B 277 PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSP 352 (562)
T ss_dssp SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSC
T ss_pred cccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCC
Confidence 67777888887776666666 7888888888888888 244 333333 56999999999987332 23688
Q ss_pred CCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccC--CcCCCCCCCCCEEEccCCcCCccCC-ccccCCCCCCe
Q 041249 627 SNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSI--PPPLGNLSSLRKISLAINNLAGSIP-FTLSKLKNLVI 703 (789)
Q Consensus 627 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~ 703 (789)
++|++|++++|++++..|..|.++++|++|+|++|++++.. |..|.++++|++|+|++|++++.+| ..|..+++|++
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~ 432 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILV 432 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCE
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCE
Confidence 99999999999999889999999999999999999999643 4678999999999999999997455 46899999999
Q ss_pred eeccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCc
Q 041249 704 LYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNK 783 (789)
Q Consensus 704 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 783 (789)
|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..++ .+++|++|+|++|+|++..+..+..+++|+.|++++|+
T Consensus 433 L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~-~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 508 (562)
T 3a79_B 433 LNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVT-HLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNP 508 (562)
T ss_dssp EECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTT-SSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCC
T ss_pred EECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhc-CCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCC
Confidence 99999999977776654 68999999999999 9999998 89999999999999995444448999999999999999
Q ss_pred Cccc
Q 041249 784 LTGE 787 (789)
Q Consensus 784 l~~~ 787 (789)
+++.
T Consensus 509 ~~c~ 512 (562)
T 3a79_B 509 WDCT 512 (562)
T ss_dssp BCCC
T ss_pred cCCC
Confidence 9875
No 32
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8.1e-41 Score=393.02 Aligned_cols=212 Identities=20% Similarity=0.209 Sum_probs=189.2
Q ss_pred ccccCccccchhcccCCcccc--cCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCC-cccCC
Q 041249 573 PHIGNLSFLKILNLENNSFTH--EIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIP-SDFGS 649 (789)
Q Consensus 573 ~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~ 649 (789)
.....+++|+.|++++|.+.. ..+..+..+.+|++|+++.|.+. ..+..+..+++|+.+++++|......+ ..|..
T Consensus 365 ~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~ 443 (635)
T 4g8a_A 365 FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS 443 (635)
T ss_dssp CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTT
T ss_pred cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhcccccccccccccc
Confidence 345578999999999999864 35566778899999999999998 556788899999999999988775544 46889
Q ss_pred CCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcC-CccCCccccCCCCCCeeeccCccccccCCccccCCCCccEE
Q 041249 650 LSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNL-AGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEF 728 (789)
Q Consensus 650 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 728 (789)
+++++.++++.|++.+..+..+..++.|+.|+|++|++ .+..|..|..+++|++|+|++|+|++..|.+|.++++|++|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 99999999999999999999999999999999999984 44678899999999999999999999999999999999999
Q ss_pred EccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCC-CCCCeeeccCCcCcc
Q 041249 729 DVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNA-SKLEVFQALNNKLTG 786 (789)
Q Consensus 729 ~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~ 786 (789)
+|++|+|+ .++...+.++++|++|+|++|+|++..|..+..+ ++|+.|+|++|++++
T Consensus 524 ~Ls~N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 524 NMSHNNFF-SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp ECTTSCCC-BCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred ECCCCcCC-CCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 99999999 6766666689999999999999999999999998 689999999999975
No 33
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.9e-43 Score=369.55 Aligned_cols=201 Identities=27% Similarity=0.323 Sum_probs=169.6
Q ss_pred hcCCCCCCcccccCCccEEEEEEc---CCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLD---EGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 343 (789)
.++|...+.||+|+||+||+|+.. .+++.||||+++... ......+..|++++++++|||||++++++....
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--- 99 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG--- 99 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT---
T ss_pred ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC---
Confidence 367999999999999999999873 457899999996542 233457889999999999999999999998766
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV 423 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~ 423 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ ||||||||+|||++.+++
T Consensus 100 --~~~ivmEy~~gg~L~~~l~~~----------~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~ 164 (304)
T 3ubd_A 100 --KLYLILDFLRGGDLFTRLSKE----------VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGH 164 (304)
T ss_dssp --EEEEEECCCTTCEEHHHHHHH----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSC
T ss_pred --EEEEEEEcCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCC
Confidence 899999999999999999643 46899999999999999999999998 999999999999999999
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
+||+|||+|+....... ......||+.|||||++.+..|+.++|||||||++|||+||+.||..
T Consensus 165 vKl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~ 228 (304)
T 3ubd_A 165 IKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228 (304)
T ss_dssp EEEESSEEEEC-----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEecccccceeccCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC
Confidence 99999999987644332 22346799999999999999999999999999999999999999973
No 34
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.4e-42 Score=364.20 Aligned_cols=206 Identities=25% Similarity=0.443 Sum_probs=163.9
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc-hhhHHHHHHHHHHhcCCCCccceeeeeeccCCC-------
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTACSGVDY------- 341 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------- 341 (789)
++|...+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|++++++++|||||++++++...+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 468889999999999999999999999999999975543 345678999999999999999999999865431
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE 421 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~ 421 (789)
......++||||+.+|+|.+++.... .....++..+..|+.|++.||+|||+++ ||||||||+|||++.+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~-------~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~ 154 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRC-------TIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMD 154 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCC-------SGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcC-------CCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCC
Confidence 11224799999999999999997551 2233566778899999999999999998 9999999999999999
Q ss_pred CceeeCcccccccCCCCCCc----------cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCC
Q 041249 422 MVSHVGDFGLARFLPPTHVQ----------TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSD 488 (789)
Q Consensus 422 ~~~kl~Dfgla~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~ 488 (789)
+++||+|||+|+........ .......||+.|||||++.+..|+.++|||||||++|||++ ||.
T Consensus 155 ~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~ 228 (299)
T 4g31_A 155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFS 228 (299)
T ss_dssp CCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCS
T ss_pred CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCC
Confidence 99999999999987654321 12234569999999999999999999999999999999996 775
No 35
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.7e-40 Score=371.69 Aligned_cols=190 Identities=20% Similarity=0.244 Sum_probs=145.1
Q ss_pred ccCccccchhcccCCcccccCcccccCc---cceeeecccCCCCccCC----------CccCcC--CCCCcEEEcccCCC
Q 041249 575 IGNLSFLKILNLENNSFTHEIPSEIGRL---RRLQVPDLNNNSIGGEI----------PVNLSS--CSNLIRIGLAKNQL 639 (789)
Q Consensus 575 l~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~i~~~~----------p~~~~~--l~~L~~L~l~~N~l 639 (789)
+..+++|++|++++|++++..|..|..+ ++|+.|++++|.+.+.. +..+.. .++|++|++++|++
T Consensus 208 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l 287 (455)
T 3v47_A 208 PFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKI 287 (455)
T ss_dssp TTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCC
T ss_pred ccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccc
Confidence 3456789999999999998888887665 89999999999766432 122222 25778888888888
Q ss_pred CCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccc
Q 041249 640 MGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSI 719 (789)
Q Consensus 640 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 719 (789)
.+..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..|.+|
T Consensus 288 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 367 (455)
T 3v47_A 288 FALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSF 367 (455)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTT
T ss_pred cccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhc
Confidence 77777777777888888888888877777777777888888888888877777777777888888888888877777777
Q ss_pred cCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCc
Q 041249 720 FNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIP 765 (789)
Q Consensus 720 ~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~ 765 (789)
..+++|++|+|++|+|+ .+|...+..+++|++|+|++|++++..|
T Consensus 368 ~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 368 LGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cccccccEEECCCCccc-cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 77788888888888887 6666665577778888888888776655
No 36
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=8e-41 Score=398.75 Aligned_cols=177 Identities=18% Similarity=0.197 Sum_probs=146.9
Q ss_pred ccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcC-C-------CCCcEEEcccCCCCCCCCcccC-
Q 041249 578 LSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSS-C-------SNLIRIGLAKNQLMGKIPSDFG- 648 (789)
Q Consensus 578 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~-l-------~~L~~L~l~~N~l~~~~~~~~~- 648 (789)
+++|+.|+|++|+++...+..+..+++|+.|+|++|+|+ .+|..+.. . ++|++|+|++|+|+ .+|..+.
T Consensus 672 ~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~ 749 (876)
T 4ecn_A 672 GINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRA 749 (876)
T ss_dssp CCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGST
T ss_pred CCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhh
Confidence 457899999999999544444568999999999999999 55554433 2 38999999999999 7788876
Q ss_pred -CCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccC------CcCCccCCccccCCCCCCeeeccCccccccCCccccC
Q 041249 649 -SLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAI------NNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFN 721 (789)
Q Consensus 649 -~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~------N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 721 (789)
.+++|+.|+|++|+|++ +|..+.++++|+.|+|++ |++.+.+|..|.++++|+.|+|++|+| +.+|..+.
T Consensus 750 ~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~- 826 (876)
T 4ecn_A 750 TTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT- 826 (876)
T ss_dssp TTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC-
T ss_pred ccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc-
Confidence 89999999999999996 688899999999999976 888889999999999999999999999 48888766
Q ss_pred CCCccEEEccCCcccccCCcccccCCCCccEEEccCCccc
Q 041249 722 ISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRIT 761 (789)
Q Consensus 722 l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~ 761 (789)
++|+.|||++|+|. .+....+.....+..+.|.+|++.
T Consensus 827 -~~L~~LdLs~N~l~-~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 827 -PQLYILDIADNPNI-SIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp -SSSCEEECCSCTTC-EEECGGGHHHHHTTCCEEECCTTS
T ss_pred -CCCCEEECCCCCCC-ccChHHccccccchheeecCCCcc
Confidence 69999999999998 655454434556777888888766
No 37
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.2e-40 Score=384.99 Aligned_cols=455 Identities=17% Similarity=0.196 Sum_probs=327.3
Q ss_pred ccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEec
Q 041249 21 KKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTV 100 (789)
Q Consensus 21 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 100 (789)
+.....+.++|.++ .+|+.+. ++|++|+|++|+|++..|..|..+++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 5 ~~~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 5 DASGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp CTTSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 34445789999999 7888765 89999999999999888899999999999999999999888889999999999999
Q ss_pred cCCCCCCcCCccccCCcccccccccCCCCC------------ccceeecCCcccCCCch-hhhcCcccccEEecccCCCC
Q 041249 101 SGNILQGEIPSTLGSCIKLEILEMQGNVFQ------------GLTILDLSRNKLSGEIP-EFLVGLKVIENLNLSYNDLE 167 (789)
Q Consensus 101 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~------------~l~~l~ls~N~l~~~~p-~~~~~~~~l~~l~ls~N~~~ 167 (789)
++|++++..|..|+++++|++|++++|++. .|+.|++++|.+.+.+| ..+..+++|++|++++|.++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 999999887888999999999999999875 27899999999555554 68999999999999999999
Q ss_pred CCCCCc-ccccCCccccccCCCccccCCCcCCCCCCCCCCCcccccceeeeEeehhhHHHHHHHHHHHHHHHHHHHhccc
Q 041249 168 GMVPTE-GVFKNASAISVLGNNKLCGGISEFKLPPCGLKKSTEWRLTFELKLVIAIVSGLMGLALTLSISFLCWVRKRKE 246 (789)
Q Consensus 168 ~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~k~ 246 (789)
+..|.. +....+..+.+.+|.... .
T Consensus 162 ~~~~~~l~~l~~L~~L~l~~n~~~~--~---------------------------------------------------- 187 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHLTLHLSESAF--L---------------------------------------------------- 187 (549)
T ss_dssp EECTTTTTTCSEEEEEEEECSBSTT--H----------------------------------------------------
T ss_pred ccChhhhhccccCceEecccCcccc--c----------------------------------------------------
Confidence 877654 334455555555553100 0
Q ss_pred CCCCCccccccccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCC
Q 041249 247 QSNPNSLINSLLNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRH 326 (789)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h 326 (789)
.+ .+ ... .
T Consensus 188 ----------------~~------------------------------------------------~~------~~~--l 195 (549)
T 2z81_A 188 ----------------LE------------------------------------------------IF------ADI--L 195 (549)
T ss_dssp ----------------HH------------------------------------------------HH------HHS--T
T ss_pred ----------------ch------------------------------------------------hh------Hhh--c
Confidence 00 00 000 0
Q ss_pred CccceeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCc
Q 041249 327 RNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPIT 406 (789)
Q Consensus 327 ~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~i 406 (789)
+++..+ -.... .+....... . ++
T Consensus 196 ~~L~~L-----------------~L~~n---~l~~~~~~~----------~---------------------------~~ 218 (549)
T 2z81_A 196 SSVRYL-----------------ELRDT---NLARFQFSP----------L---------------------------PV 218 (549)
T ss_dssp TTBSEE-----------------EEESC---BCTTCCCCC----------C---------------------------SS
T ss_pred ccccEE-----------------EccCC---ccccccccc----------c---------------------------ch
Confidence 000000 00000 000000000 0 00
Q ss_pred eecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCC
Q 041249 407 THCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKP 486 (789)
Q Consensus 407 vH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P 486 (789)
.. .-...+.-++. +
T Consensus 219 ~~-----------~~~~L~~L~l~------------------~------------------------------------- 232 (549)
T 2z81_A 219 DE-----------VSSPMKKLAFR------------------G------------------------------------- 232 (549)
T ss_dssp CC-----------CCCCCCEEEEE------------------S-------------------------------------
T ss_pred hh-----------hhhcccceecc------------------c-------------------------------------
Confidence 00 00000000000 0
Q ss_pred CCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccc
Q 041249 487 SDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLK 566 (789)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~ 566 (789)
-.+. ......+......+.++..+++..+.
T Consensus 233 ----------------------------n~l~----------------------~~~~~~l~~~~~~~~~L~~l~l~~~~ 262 (549)
T 2z81_A 233 ----------------------------SVLT----------------------DESFNELLKLLRYILELSEVEFDDCT 262 (549)
T ss_dssp ----------------------------CEEE----------------------HHHHHHHHGGGGGCTTCCEEEEESCE
T ss_pred ----------------------------cccc----------------------hhHHHHHHHHhhhhcccccccccccc
Confidence 0000 00011122223345566666666665
Q ss_pred cccc------ccccccCccccchhcccCCccccc-----CcccccCccceeeecccCCCCccCCCccC-cCCCCCcEEEc
Q 041249 567 LAGS------ILPHIGNLSFLKILNLENNSFTHE-----IPSEIGRLRRLQVPDLNNNSIGGEIPVNL-SSCSNLIRIGL 634 (789)
Q Consensus 567 ~~~~------~l~~l~~l~~L~~L~L~~N~l~~~-----~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~-~~l~~L~~L~l 634 (789)
.... ....+..+++|+.|++.++.+... .+..+....+|++|++++|+++ .+|..+ .++++|++|++
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~L 341 (549)
T 2z81_A 263 LNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDL 341 (549)
T ss_dssp EECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEEC
T ss_pred ccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEc
Confidence 5432 223456788899999999987642 1222344578999999999998 677666 67999999999
Q ss_pred ccCCCCCCCC---cccCCCCCCcEEEccCCCCCccCC--cCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCc
Q 041249 635 AKNQLMGKIP---SDFGSLSKIEVLSLGFNNLIGSIP--PPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVN 709 (789)
Q Consensus 635 ~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 709 (789)
++|++.+..| ..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|+|+ .+|..+..+++|++|++++|
T Consensus 342 s~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N 420 (549)
T 2z81_A 342 SENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSST 420 (549)
T ss_dssp CSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTS
T ss_pred cCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCC
Confidence 9999997653 347889999999999999986543 45889999999999999999 78889999999999999999
Q ss_pred cccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 710 RLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 710 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
+|+ .+|..+. ++|+.|+|++|+|++ ++ ..+++|++|+|++|+|+ .+|. ...+++|+.|+|++|++++.+|
T Consensus 421 ~l~-~l~~~~~--~~L~~L~Ls~N~l~~-~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~ 490 (549)
T 2z81_A 421 GIR-VVKTCIP--QTLEVLDVSNNNLDS-FS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPD 490 (549)
T ss_dssp CCS-CCCTTSC--TTCSEEECCSSCCSC-CC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCT
T ss_pred Ccc-cccchhc--CCceEEECCCCChhh-hc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCH
Confidence 998 4555443 689999999999994 43 26899999999999999 5665 4679999999999999998765
No 38
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.8e-39 Score=363.40 Aligned_cols=379 Identities=20% Similarity=0.209 Sum_probs=278.9
Q ss_pred EEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCC-cccccCCCCCCEEEccCCc
Q 041249 2 LALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTI-PPQLMGLTSLVALDLSRNQ 80 (789)
Q Consensus 2 l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~ 80 (789)
+++++++++ .+|+ + .++|++|+|++|.|++..|..|+.+++|++|+|++|.+.+.+ |..|..+++|++|+|++|+
T Consensus 15 ~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~ 90 (455)
T 3v47_A 15 AICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90 (455)
T ss_dssp EECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCT
T ss_pred cCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCc
Confidence 688999998 7887 4 378999999999999888999999999999999999998665 5679999999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCCCCCcCCcc--ccCCcccccccccCCCCCccceeecCCcccCCCchhh-hcCccccc
Q 041249 81 FRGSFPTEVGNLINLETLTVSGNILQGEIPST--LGSCIKLEILEMQGNVFQGLTILDLSRNKLSGEIPEF-LVGLKVIE 157 (789)
Q Consensus 81 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~l~l~~N~~~~l~~l~ls~N~l~~~~p~~-~~~~~~l~ 157 (789)
+++..|..|+.+++|++|+|++|++++.+|.. +..+++|++|+|+ +|++++..|.. +..+++|+
T Consensus 91 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~-------------~n~l~~~~~~~~~~~l~~L~ 157 (455)
T 3v47_A 91 FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLR-------------DNNIKKIQPASFFLNMRRFH 157 (455)
T ss_dssp TCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECC-------------SSBCCSCCCCGGGGGCTTCC
T ss_pred cCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECC-------------CCccCccCcccccCCCCccc
Confidence 99888999999999999999999999866654 7777776655554 55566666765 78899999
Q ss_pred EEecccCCCCCCCCCcccccCCccccccCCCccccCCCcCCCCCCCCCCCcccccceeeeEeehhhHHHHHHHHHHHHHH
Q 041249 158 NLNLSYNDLEGMVPTEGVFKNASAISVLGNNKLCGGISEFKLPPCGLKKSTEWRLTFELKLVIAIVSGLMGLALTLSISF 237 (789)
Q Consensus 158 ~l~ls~N~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~~~~~~~~ 237 (789)
+|++++|++++.++.. +....
T Consensus 158 ~L~L~~n~l~~~~~~~--l~~l~--------------------------------------------------------- 178 (455)
T 3v47_A 158 VLDLTFNKVKSICEED--LLNFQ--------------------------------------------------------- 178 (455)
T ss_dssp EEECTTCCBSCCCTTT--SGGGT---------------------------------------------------------
T ss_pred EEeCCCCcccccChhh--hhccc---------------------------------------------------------
Confidence 9999999998765542 00000
Q ss_pred HHHHHhcccCCCCCccccccccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHH
Q 041249 238 LCWVRKRKEQSNPNSLINSLLNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAE 317 (789)
Q Consensus 238 ~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e 317 (789)
+. .++.+....
T Consensus 179 ---------------------------------------------------------~~--~L~~L~l~~---------- 189 (455)
T 3v47_A 179 ---------------------------------------------------------GK--HFTLLRLSS---------- 189 (455)
T ss_dssp ---------------------------------------------------------TC--EEEEEECTT----------
T ss_pred ---------------------------------------------------------cc--ccccccccc----------
Confidence 00 000000000
Q ss_pred HHHHhcCCCCccceeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 041249 318 CRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397 (789)
Q Consensus 318 ~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~ 397 (789)
. .+
T Consensus 190 ------------------------------------n---~l-------------------------------------- 192 (455)
T 3v47_A 190 ------------------------------------I---TL-------------------------------------- 192 (455)
T ss_dssp ------------------------------------C---BC--------------------------------------
T ss_pred ------------------------------------C---cc--------------------------------------
Confidence 0 00
Q ss_pred hhcCCCCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHH
Q 041249 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILM 477 (789)
Q Consensus 398 LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl 477 (789)
.+ +++... +
T Consensus 193 -----------------------------~~-------------------------~~~~~~--------------~--- 201 (455)
T 3v47_A 193 -----------------------------QD-------------------------MNEYWL--------------G--- 201 (455)
T ss_dssp -----------------------------TT-------------------------CSTTCT--------------T---
T ss_pred -----------------------------cc-------------------------cchhhc--------------c---
Confidence 00 000000 0
Q ss_pred HHHHHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhcccccee
Q 041249 478 LELIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKV 557 (789)
Q Consensus 478 ~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l 557 (789)
.....-...+.++
T Consensus 202 -------------------------------------------------------------------~~~~~~~~~~~~L 214 (455)
T 3v47_A 202 -------------------------------------------------------------------WEKCGNPFKNTSI 214 (455)
T ss_dssp -------------------------------------------------------------------HHHHCCTTTTCEE
T ss_pred -------------------------------------------------------------------cccccccccccee
Confidence 0000001123455
Q ss_pred eEeccCcccccccccccccCc---cccchhcccCCccccc----------CcccccCc--cceeeecccCCCCccCCCcc
Q 041249 558 TILDLESLKLAGSILPHIGNL---SFLKILNLENNSFTHE----------IPSEIGRL--RRLQVPDLNNNSIGGEIPVN 622 (789)
Q Consensus 558 ~~l~l~s~~~~~~~l~~l~~l---~~L~~L~L~~N~l~~~----------~~~~~~~l--~~L~~L~Ls~N~i~~~~p~~ 622 (789)
+.+++..+.+....+..+..+ ++|+.|++++|.+.+. .+..|..+ ++|++|++++|.+++..|..
T Consensus 215 ~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 294 (455)
T 3v47_A 215 TTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSV 294 (455)
T ss_dssp EEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTT
T ss_pred eeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhh
Confidence 556666665555544444433 7788888888765432 12223322 57888888888888888888
Q ss_pred CcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCC
Q 041249 623 LSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLV 702 (789)
Q Consensus 623 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 702 (789)
|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|+
T Consensus 295 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 374 (455)
T 3v47_A 295 FSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLK 374 (455)
T ss_dssp TTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred cccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccccccc
Confidence 88888888888888888877788888888888888888888888788888888888888888888877788888888888
Q ss_pred eeeccCccccccCCccccCCCCccEEEccCCcccccCC
Q 041249 703 ILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIP 740 (789)
Q Consensus 703 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip 740 (789)
+|+|++|+|++..+..|..+++|++|+|++|++++..|
T Consensus 375 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 375 ELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 88888888887666777888888888888888887776
No 39
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=360.47 Aligned_cols=207 Identities=24% Similarity=0.315 Sum_probs=175.8
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCC-CCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVD-YQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 345 (789)
.++|...+.||+|+||+||+|.+..+++.||||+++... ....+.+.+|+++|+.++|||||++++++.... +....
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357899999999999999999999999999999996542 233567889999999999999999999886543 22334
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..|+|||||. |+|.+++... +.+++.++..|+.||+.||+|||+.+ ||||||||+|||++.++.+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~----------~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~K 198 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSS----------QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELK 198 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSS----------SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEE
T ss_pred EEEEEEeCCC-CCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEE
Confidence 7899999996 7899998644 57999999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCC--CccceeeecccccccCcccCCCC-CcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 426 VGDFGLARFLPPTH--VQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 426 l~Dfgla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|+|||+|+...... .........||+.|||||++.+. .++.++||||+||++|||++|+.||..
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g 265 (398)
T 4b99_A 199 IGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265 (398)
T ss_dssp ECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred EeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence 99999999775433 22233456799999999998775 469999999999999999999999973
No 40
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=368.76 Aligned_cols=426 Identities=19% Similarity=0.184 Sum_probs=321.6
Q ss_pred CEEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCc
Q 041249 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQ 80 (789)
Q Consensus 1 ~l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 80 (789)
+|||++|++++..|++|+++++|++|+|++|+|++..|+.|+.+++|++|+|++|+|+ .+|.. .+++|++|+|++|+
T Consensus 25 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~ 101 (520)
T 2z7x_B 25 ILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNA 101 (520)
T ss_dssp EEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSC
T ss_pred EEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCc
Confidence 4899999999888899999999999999999999888999999999999999999999 67776 89999999999999
Q ss_pred CCC-CCcccccCCCCCCEEeccCCCCCCcCCccccCCccc--ccccccCCCC--Cc------------cceeecCCcccC
Q 041249 81 FRG-SFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKL--EILEMQGNVF--QG------------LTILDLSRNKLS 143 (789)
Q Consensus 81 l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L--~~l~l~~N~~--~~------------l~~l~ls~N~l~ 143 (789)
+++ .+|..|+.+++|++|++++|++++ ..+..+++| ++|++++|++ .+ ...+++++|.+.
T Consensus 102 l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~ 178 (520)
T 2z7x_B 102 FDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEF 178 (520)
T ss_dssp CSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCC
T ss_pred cccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcch
Confidence 997 578999999999999999999986 457777888 9999999988 21 225789999998
Q ss_pred CCchh-hhcCcccccEEecccCC-------CCCCCCCcccccCCccccccCCCccccCCCcCCCCCCCCCCCccccccee
Q 041249 144 GEIPE-FLVGLKVIENLNLSYND-------LEGMVPTEGVFKNASAISVLGNNKLCGGISEFKLPPCGLKKSTEWRLTFE 215 (789)
Q Consensus 144 ~~~p~-~~~~~~~l~~l~ls~N~-------~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (789)
+.+++ .+..+++|+.|++++|. +.+.++..+....+..+.+.+|.....
T Consensus 179 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~----------------------- 235 (520)
T 2z7x_B 179 HFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWN----------------------- 235 (520)
T ss_dssp CCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHH-----------------------
T ss_pred hhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHH-----------------------
Confidence 87664 57789999999999998 666665545556666666655432000
Q ss_pred eeEeehhhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccccccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCc
Q 041249 216 LKLVIAIVSGLMGLALTLSISFLCWVRKRKEQSNPNSLINSLLNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGR 295 (789)
Q Consensus 216 ~~~~v~~~~~~~~v~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~ 295 (789)
.. ..
T Consensus 236 ---------~~------------------------------------~~------------------------------- 239 (520)
T 2z7x_B 236 ---------SF------------------------------------IR------------------------------- 239 (520)
T ss_dssp ---------HH------------------------------------HH-------------------------------
T ss_pred ---------HH------------------------------------HH-------------------------------
Confidence 00 00
Q ss_pred eEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceee-eeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccC
Q 041249 296 TTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVF-TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDK 374 (789)
Q Consensus 296 ~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~-~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~ 374 (789)
+. ... ..+++..+. ..+. +. |.+...+.
T Consensus 240 ------------------~~---~~~---~~~~L~~L~l~~n~------------l~-----~~~p~~~~---------- 268 (520)
T 2z7x_B 240 ------------------IL---QLV---WHTTVWYFSISNVK------------LQ-----GQLDFRDF---------- 268 (520)
T ss_dssp ------------------HH---HHH---HTSSCSEEEEEEEE------------EE-----SCCCCCCC----------
T ss_pred ------------------HH---HHh---hhCcccEEEeeccc------------cc-----Cccccchh----------
Confidence 00 000 000000000 0000 00 00000000
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeeccccccc
Q 041249 375 APRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYI 454 (789)
Q Consensus 375 ~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~ 454 (789)
++.
T Consensus 269 -----------------------------------------------------~~~------------------------ 271 (520)
T 2z7x_B 269 -----------------------------------------------------DYS------------------------ 271 (520)
T ss_dssp -----------------------------------------------------CCC------------------------
T ss_pred -----------------------------------------------------hcc------------------------
Confidence 000
Q ss_pred CcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhh
Q 041249 455 APEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQ 534 (789)
Q Consensus 455 aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 534 (789)
T Consensus 272 -------------------------------------------------------------------------------- 271 (520)
T 2z7x_B 272 -------------------------------------------------------------------------------- 271 (520)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhchhHHHHHHHHhhccccceeeEeccCccccccccc-ccccCc---cccchhcccCCcccccCcccccCccceeeecc
Q 041249 535 IRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL-PHIGNL---SFLKILNLENNSFTHEIPSEIGRLRRLQVPDL 610 (789)
Q Consensus 535 ~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l-~~l~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 610 (789)
...+.+++.+++..+.. ..+ ..+..+ ++|+.|++++|.+.... .+..+++|++|++
T Consensus 272 ----------------~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~L 331 (520)
T 2z7x_B 272 ----------------GTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDF 331 (520)
T ss_dssp ----------------SCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEEC
T ss_pred ----------------cccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEe
Confidence 00112222233333322 111 222222 56899999999987432 1368899999999
Q ss_pred cCCCCccCCCccCcCCCCCcEEEcccCCCCC--CCCcccCCCCCCcEEEccCCCCCccCCc-CCCCCCCCCEEEccCCcC
Q 041249 611 NNNSIGGEIPVNLSSCSNLIRIGLAKNQLMG--KIPSDFGSLSKIEVLSLGFNNLIGSIPP-PLGNLSSLRKISLAINNL 687 (789)
Q Consensus 611 s~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l 687 (789)
++|++++..|..+..+++|++|++++|+|++ .+|..|..+++|++|+|++|++++.+|. .|..+++|++|+|++|++
T Consensus 332 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l 411 (520)
T 2z7x_B 332 SNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNIL 411 (520)
T ss_dssp CSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCC
T ss_pred ECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCC
Confidence 9999998899999999999999999999996 4567799999999999999999984554 588999999999999999
Q ss_pred CccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCccccc
Q 041249 688 AGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGA 763 (789)
Q Consensus 688 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~ 763 (789)
++..|..+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|...+..+++|++|+|++|++++.
T Consensus 412 ~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 412 TDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp CGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred Ccchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCccc
Confidence 888887765 79999999999999 78888889999999999999999 89988666899999999999999864
No 41
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.2e-39 Score=365.98 Aligned_cols=199 Identities=23% Similarity=0.302 Sum_probs=173.8
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhH---HHHHHHHHHhcCCCCccceeeeeeccCCCCC
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASR---SFIAECRALRSIRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~---~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 343 (789)
++|...++||+|+||+||+|+...+++.||||+++... ..... ..+.++++++.++|||||++++++...+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~--- 265 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--- 265 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS---
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC---
Confidence 68999999999999999999999999999999996431 12222 2334567778889999999999998876
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV 423 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~ 423 (789)
..|+||||+.+|+|.+++... ..+++..+..|+.||+.||+|||+.+ ||||||||+|||++.+++
T Consensus 266 --~lylVmEy~~GGdL~~~l~~~----------~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~ 330 (689)
T 3v5w_A 266 --KLSFILDLMNGGDLHYHLSQH----------GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGH 330 (689)
T ss_dssp --EEEEEECCCCSCBHHHHHHHH----------CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSC
T ss_pred --EEEEEEecCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCC
Confidence 899999999999999999643 46899999999999999999999998 999999999999999999
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCC-CcCccccchhhHHHHHHHHHhcCCCCcc
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIM 490 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfGvvl~elltG~~P~~~~ 490 (789)
+||+|||+|+...... .....||+.|||||++..+ .|+.++||||+||++|||++|+.||...
T Consensus 331 vKL~DFGlA~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~ 394 (689)
T 3v5w_A 331 VRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394 (689)
T ss_dssp EEECCCTTCEECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred EEecccceeeecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999876543 2235799999999999754 6999999999999999999999999743
No 42
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.7e-37 Score=360.93 Aligned_cols=183 Identities=20% Similarity=0.121 Sum_probs=148.3
Q ss_pred EEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcC
Q 041249 2 LALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQF 81 (789)
Q Consensus 2 l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 81 (789)
.|+++.+++ .+|+.+- +.+++|||++|+|++..|.+|.++++|++|+|++|+|++..|.+|..|++|++|+|++|+|
T Consensus 36 ~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 36 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 467888888 7887663 4789999999999977778899999999999999999977777899999999999999999
Q ss_pred CCCCcccccCCCCCCEEeccCCCCCCcCCccccCCcccccccccCCCCCc------------cceeecCCcccCCCchhh
Q 041249 82 RGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQG------------LTILDLSRNKLSGEIPEF 149 (789)
Q Consensus 82 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~------------l~~l~ls~N~l~~~~p~~ 149 (789)
++..|..|.++++|++|+|++|++++..+..|+++++|++|++++|++.+ |+.|+|++|+|++..|..
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 86666778999999999999999997667789999999999999997742 788999999999888887
Q ss_pred hcCcccc----cEEecccCCCCCCCCCcccccCCccccccCC
Q 041249 150 LVGLKVI----ENLNLSYNDLEGMVPTEGVFKNASAISVLGN 187 (789)
Q Consensus 150 ~~~~~~l----~~l~ls~N~~~~~~~~~~~~~~~~~~~~~~n 187 (789)
+..+..+ ..++++.|+++..++..........+...+|
T Consensus 193 l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 193 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp GHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred ccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 7766544 4688999999887776533333344444444
No 43
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.5e-38 Score=339.61 Aligned_cols=283 Identities=31% Similarity=0.461 Sum_probs=230.3
Q ss_pred ccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeec
Q 041249 258 LNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACS 337 (789)
Q Consensus 258 ~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 337 (789)
.++++.++..++++|...+.||+|+||.||+|.+. +++.||||.+........+.+.+|++++++++||||+++++++.
T Consensus 27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 105 (321)
T 2qkw_B 27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105 (321)
T ss_dssp ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred eeecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence 45666777889999999999999999999999976 78999999987776666788999999999999999999999987
Q ss_pred cCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCcee
Q 041249 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNIL 417 (789)
Q Consensus 338 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nil 417 (789)
... ..++||||+.+|+|.+++... ......+++.++..++.|++.||+|||+.+ ++||||||+||+
T Consensus 106 ~~~-----~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil 171 (321)
T 2qkw_B 106 ERN-----EMILIYKYMENGNLKRHLYGS------DLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINIL 171 (321)
T ss_dssp CTT-----CCEEEEECCTTCBTGGGSSSS------CCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEE
T ss_pred CCC-----eEEEEEEcCCCCcHHHHHhcc------CCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEE
Confidence 655 789999999999999999654 122346899999999999999999999988 999999999999
Q ss_pred cCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCcccc-CCcc
Q 041249 418 LDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFE-GDMN 496 (789)
Q Consensus 418 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~-~~~~ 496 (789)
++.++.+||+|||+++...............||..|+|||.+.+..++.++||||||+++|||++|+.||..... +...
T Consensus 172 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~ 251 (321)
T 2qkw_B 172 LDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN 251 (321)
T ss_dssp ECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCC
T ss_pred ECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHH
Confidence 999999999999999876544333333445689999999999888999999999999999999999999976533 3445
Q ss_pred HHHHHHHhCCCc-hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 497 LHNFARMALPDH-VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 497 ~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
...|........ ....+++.+.... ..++...+.+++..|++.++.+||+...+...+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 252 LAEWAVESHNNGQLEQIVDPNLADKI------------------RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp HHHHTHHHHTTTCCCSSSSSSCTTCS------------------CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhhccccccHHHhcChhhcccc------------------CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 666654433332 4455555443221 2356677889999999999999999988755443
No 44
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.2e-38 Score=343.12 Aligned_cols=200 Identities=23% Similarity=0.312 Sum_probs=170.5
Q ss_pred HhhcCCCCCCcccccCCccEEEEEEc---CCceEEEEEEeccccchhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCC
Q 041249 267 NATDGFSSANLIGTGSFGSVYKGVLD---EGRTTVTVKVFNLHHHRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQ 342 (789)
Q Consensus 267 ~~~~~f~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 342 (789)
.-.+.|...+.||+|+||+||+|+.+ .+++.||||.+.... ....+.+|+++++.+ .||||+++++++...+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~-- 93 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND-- 93 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT--
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC--
Confidence 34678999999999999999999874 357899999985443 345678899999998 6999999999988766
Q ss_pred CCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC-
Q 041249 343 GNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE- 421 (789)
Q Consensus 343 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~- 421 (789)
..++||||+++|+|.+++. .+++.++..++.|++.||+|||+.+ ||||||||+|||++.+
T Consensus 94 ---~~~lvmE~~~g~~L~~~~~-------------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~ 154 (361)
T 4f9c_A 94 ---HVVIAMPYLEHESFLDILN-------------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRL 154 (361)
T ss_dssp ---EEEEEEECCCCCCHHHHHT-------------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTT
T ss_pred ---EEEEEEeCCCcccHHHHHc-------------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCC
Confidence 8999999999999999983 3789999999999999999999998 9999999999999877
Q ss_pred CceeeCcccccccCCCCCCc--------------------------cceeeecccccccCcccCCCC-CcCccccchhhH
Q 041249 422 MVSHVGDFGLARFLPPTHVQ--------------------------TSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYG 474 (789)
Q Consensus 422 ~~~kl~Dfgla~~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfG 474 (789)
+.+||+|||+|+...+.... .......||+.|+|||++.+. .|+.++||||+|
T Consensus 155 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG 234 (361)
T 4f9c_A 155 KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG 234 (361)
T ss_dssp TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhH
Confidence 79999999999876543211 112234699999999998876 489999999999
Q ss_pred HHHHHHHHhcCCCCc
Q 041249 475 ILMLELIIRKKPSDI 489 (789)
Q Consensus 475 vvl~elltG~~P~~~ 489 (789)
|++|||++|+.||..
T Consensus 235 ~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 235 VIFLSLLSGRYPFYK 249 (361)
T ss_dssp HHHHHHHHTCSSSSC
T ss_pred HHHHHHHHCCCCCCC
Confidence 999999999999963
No 45
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.7e-38 Score=359.78 Aligned_cols=253 Identities=22% Similarity=0.237 Sum_probs=205.2
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKAL 349 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 349 (789)
++|...+.||+|+||+||+|..+.+++.||+|++........+.+.+|+++|+.++|||||++++++.... ..++
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----~~~i 231 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN-----EMVM 231 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS-----EEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-----EEEE
Confidence 67999999999999999999999999999999997766666778999999999999999999999998766 8999
Q ss_pred EeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC--CceeeC
Q 041249 350 VYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE--MVSHVG 427 (789)
Q Consensus 350 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~ 427 (789)
|||||.+|+|.+++... ...+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+
T Consensus 232 v~E~~~gg~L~~~i~~~---------~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~ 299 (573)
T 3uto_A 232 IYEFMSGGELFEKVADE---------HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLI 299 (573)
T ss_dssp EEECCCCCBHHHHHTCT---------TSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEEC
T ss_pred EEeecCCCcHHHHHHHh---------CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEe
Confidence 99999999999998543 246899999999999999999999998 9999999999999854 799999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCC
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPD 507 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 507 (789)
|||+|+.+.... ......||+.|||||++.+..|+.++||||+||++|||++|+.||... +..+..+.....
T Consensus 300 DFG~a~~~~~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~-----~~~~~~~~i~~~ 371 (573)
T 3uto_A 300 DFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-----NDDETLRNVKSC 371 (573)
T ss_dssp CCSSCEECCTTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTT
T ss_pred eccceeEccCCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHhC
Confidence 999999876543 233457999999999999999999999999999999999999999732 111221111110
Q ss_pred chhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 508 HVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 508 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
. ..+.. ...........+++..|.+.++..|++..+...+
T Consensus 372 ~------~~~~~------------------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 372 D------WNMDD------------------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp C------CCCCS------------------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred C------CCCCc------------------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 00000 0000122344577889999999999988876544
No 46
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=8.5e-38 Score=336.25 Aligned_cols=286 Identities=32% Similarity=0.517 Sum_probs=235.0
Q ss_pred ccccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc-hhhHHHHHHHHHHhcCCCCccceeee
Q 041249 256 SLLNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFT 334 (789)
Q Consensus 256 ~~~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~ 334 (789)
....|++.++..++++|...+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 4568999999999999999999999999999999865 689999999875533 23447899999999999999999999
Q ss_pred eeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCC
Q 041249 335 ACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPS 414 (789)
Q Consensus 335 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~ 414 (789)
++.... ..++||||+.+|+|.+++... ......+++..+..++.|++.||+|||+...++|+||||||+
T Consensus 95 ~~~~~~-----~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~ 163 (326)
T 3uim_A 95 FCMTPT-----ERLLVYPYMANGSVASCLRER------PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAA 163 (326)
T ss_dssp EECCSS-----CCEEEEECCTTCBHHHHHHCC------STTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGG
T ss_pred EEecCC-----ceEEEEEeccCCCHHHHHHhc------cccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchh
Confidence 997665 789999999999999999754 123456999999999999999999999993334999999999
Q ss_pred ceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCcc---c
Q 041249 415 NILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIM---F 491 (789)
Q Consensus 415 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~---~ 491 (789)
||+++.++.+||+|||+++........ ......||..|+|||.+.+..++.++||||||+++|||++|+.||+.. .
T Consensus 164 Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 242 (326)
T 3uim_A 164 NILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 242 (326)
T ss_dssp GEEECTTCCEEECCCSSCEECCSSSSC-EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTT
T ss_pred hEEECCCCCEEeccCccccccCccccc-ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccc
Confidence 999999999999999999987644322 233455999999999998889999999999999999999999999743 3
Q ss_pred cCCccHHHHHHHhCCCc-hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 492 EGDMNLHNFARMALPDH-VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 492 ~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
........|++...... .....+..+.... ..++...+.+++..|++.++.+||+...+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 304 (326)
T 3uim_A 243 DDDVMLLDWVKGLLKEKKLEALVDVDLQGNY------------------KDEEVEQLIQVALLCTQSSPMERPKMSEVVR 304 (326)
T ss_dssp TSCSBHHHHHTTTTSSCCSTTSSCTTCTTSC------------------CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred ccchhHHHHHHHHhhchhhhhhcChhhcccc------------------CHHHHHHHHHHHHHHhCcCCccCCCHHHHHH
Confidence 34556777777666554 5555565554332 2355677889999999999999999988755
Q ss_pred cc
Q 041249 571 IL 572 (789)
Q Consensus 571 ~l 572 (789)
.+
T Consensus 305 ~L 306 (326)
T 3uim_A 305 ML 306 (326)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 47
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.7e-37 Score=353.07 Aligned_cols=147 Identities=18% Similarity=0.197 Sum_probs=129.3
Q ss_pred CEEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCc
Q 041249 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQ 80 (789)
Q Consensus 1 ~l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 80 (789)
++|+++|+++ .+|..+. ++|++|+|++|.|++..|+.|+.+++|++|+|++|+|++..|..|+.+++|++|+|++|+
T Consensus 35 ~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 111 (562)
T 3a79_B 35 MVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNR 111 (562)
T ss_dssp EEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCc
Confidence 4799999999 5888775 799999999999998888899999999999999999998889999999999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCCCCC-cCCccccCCcccccccccCCCCCc--------c--ceeecCCccc--CCCch
Q 041249 81 FRGSFPTEVGNLINLETLTVSGNILQG-EIPSTLGSCIKLEILEMQGNVFQG--------L--TILDLSRNKL--SGEIP 147 (789)
Q Consensus 81 l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~l~l~~N~~~~--------l--~~l~ls~N~l--~~~~p 147 (789)
++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++.. | +.|++++|.+ ++..|
T Consensus 112 l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~ 188 (562)
T 3a79_B 112 LQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGET 188 (562)
T ss_dssp CC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSC
T ss_pred CC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCc
Confidence 98 78776 89999999999999996 356899999999999999998753 5 8999999999 77766
Q ss_pred hhhcCc
Q 041249 148 EFLVGL 153 (789)
Q Consensus 148 ~~~~~~ 153 (789)
..+..+
T Consensus 189 ~~l~~l 194 (562)
T 3a79_B 189 ESLQIP 194 (562)
T ss_dssp CEEEEC
T ss_pred cccccc
Confidence 665543
No 48
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.9e-36 Score=336.34 Aligned_cols=183 Identities=21% Similarity=0.280 Sum_probs=139.1
Q ss_pred cccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEc
Q 041249 579 SFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSL 658 (789)
Q Consensus 579 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 658 (789)
++|++|++++|+++ .+|. |..+++|++|++++|++++ +|.. +++|++|++++|++++ +|.. +++|++|++
T Consensus 215 ~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l 284 (454)
T 1jl5_A 215 LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDV 284 (454)
T ss_dssp TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEEC
Confidence 58999999999999 6674 9999999999999999995 5543 4899999999999995 5653 478999999
Q ss_pred cCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCC-CCCCeeeccCccccccCCccccCCCCccEEEccCCcccc
Q 041249 659 GFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKL-KNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQG 737 (789)
Q Consensus 659 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 737 (789)
++|++++. |.. .++|++|++++|++++ ++ .+ ++|++|++++|++++ +|.. +++|+.|++++|+++
T Consensus 285 s~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~- 350 (454)
T 1jl5_A 285 SENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA- 350 (454)
T ss_dssp CSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-
T ss_pred cCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-
Confidence 99999963 221 2689999999999985 33 23 589999999999995 6654 588999999999999
Q ss_pred cCCcccccCCCCccEEEccCCcccc--cCcccccCC-------------CCCCeeeccCCcCcc--cCC
Q 041249 738 NIPLDYGFTLQNLQYFSIGTNRITG--AIPPSISNA-------------SKLEVFQALNNKLTG--EVP 789 (789)
Q Consensus 738 ~ip~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l-------------~~L~~L~l~~N~l~~--~~P 789 (789)
.+|. .+++|++|+|++|++++ .+|.++..+ ++|+.|++++|+++| .+|
T Consensus 351 ~lp~----~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP 415 (454)
T 1jl5_A 351 EVPE----LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIP 415 (454)
T ss_dssp CCCC----CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-----------------------------
T ss_pred cccc----hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccch
Confidence 7887 36899999999999998 678888887 889999999999998 665
No 49
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4e-36 Score=320.22 Aligned_cols=280 Identities=29% Similarity=0.427 Sum_probs=224.5
Q ss_pred ccccccHHHHHHhhcCCCCC------CcccccCCccEEEEEEcCCceEEEEEEeccc----cchhhHHHHHHHHHHhcCC
Q 041249 256 SLLNLSYQNLHNATDGFSSA------NLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH----HHRASRSFIAECRALRSIR 325 (789)
Q Consensus 256 ~~~~~~~~~~~~~~~~f~~~------~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~ 325 (789)
+...|++.++..++++|+.. +.||+|+||.||+|.+ +++.||||++... .....+.+.+|++++++++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 56789999999999999988 8999999999999987 4889999998643 2334577999999999999
Q ss_pred CCccceeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCC
Q 041249 326 HRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPI 405 (789)
Q Consensus 326 h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ 405 (789)
||||+++++++.... ..++||||+.+|+|.+++... .....+++..+..++.|++.||+|||+.+
T Consensus 89 h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--- 153 (307)
T 2nru_A 89 HENLVELLGFSSDGD-----DLCLVYVYMPNGSLLDRLSCL-------DGTPPLSWHMRCKIAQGAANGINFLHENH--- 153 (307)
T ss_dssp CTTBCCEEEEECSSS-----SCEEEEECCTTCBHHHHHHTG-------GGCCCCCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred CCCeEEEEEEEecCC-----ceEEEEEecCCCcHHHHHHhc-------cCCCCCCHHHHHHHHHHHHHHHHHHhcCC---
Confidence 999999999987655 789999999999999998643 12356899999999999999999999998
Q ss_pred ceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcC
Q 041249 406 TTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKK 485 (789)
Q Consensus 406 ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~ 485 (789)
++||||||+||+++.++.+||+|||.++...............||..|+|||.+. +.++.++||||||+++|||++|+.
T Consensus 154 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~ 232 (307)
T 2nru_A 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLP 232 (307)
T ss_dssp EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCC
T ss_pred eecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999998776544333334456999999999875 468999999999999999999999
Q ss_pred CCCccccCCccHHHHHHHhC--CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccC
Q 041249 486 PSDIMFEGDMNLHNFARMAL--PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLE 563 (789)
Q Consensus 486 P~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~ 563 (789)
||...... ..+..+.+... ...+.+.+++.+... ...+...+.+++..|++.++..||
T Consensus 233 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~l~~li~~cl~~~p~~Rp 292 (307)
T 2nru_A 233 AVDEHREP-QLLLDIKEEIEDEEKTIEDYIDKKMNDA-------------------DSTSVEAMYSVASQCLHEKKNKRP 292 (307)
T ss_dssp SBCTTBSS-SBTTHHHHHHHTTSCCHHHHSCSSCSCC-------------------CHHHHHHHHHHHHHHTCSSTTTSC
T ss_pred CcccCcch-HHHHHHHHHhhhhhhhhhhhcccccccc-------------------chHHHHHHHHHHHHHcCCCcccCc
Confidence 99854332 22223322221 122445555544321 224566778899999999999999
Q ss_pred cccccccccc
Q 041249 564 SLKLAGSILP 573 (789)
Q Consensus 564 s~~~~~~~l~ 573 (789)
+...+...+.
T Consensus 293 s~~~l~~~L~ 302 (307)
T 2nru_A 293 DIKKVQQLLQ 302 (307)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9987754443
No 50
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=337.11 Aligned_cols=150 Identities=21% Similarity=0.185 Sum_probs=117.7
Q ss_pred EEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcC
Q 041249 2 LALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQF 81 (789)
Q Consensus 2 l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 81 (789)
+++++++++ .+|..+. +++++|+|++|+|++..|+.|..+++|++|+|++|+|++..|..|..+++|++|+|++|++
T Consensus 16 v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 16 VLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 577888888 7777664 5788888888888877788888888888888888888877788888888888888888888
Q ss_pred CCCCcccccCCCCCCEEeccCCCCCCcCCccccCCcccccccccCCCCCccceeecCCcccCCCchhhhcCcccccEEec
Q 041249 82 RGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENLNL 161 (789)
Q Consensus 82 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~l~~l~ls~N~l~~~~p~~~~~~~~l~~l~l 161 (789)
++..+..|..+++|++|+|++|++++..|..|..+++|++|++++|+ +++..|..+..+++|+.|++
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~-------------l~~~~~~~~~~l~~L~~L~l 159 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDND-------------LVYISHRAFSGLNSLEQLTL 159 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTT-------------CCEECTTSSTTCTTCCEEEE
T ss_pred CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCc-------------cceeChhhccCCCCCCEEEC
Confidence 85444567888888888888888887777778777777665555544 44555667777888888888
Q ss_pred ccCCCC
Q 041249 162 SYNDLE 167 (789)
Q Consensus 162 s~N~~~ 167 (789)
++|+++
T Consensus 160 ~~n~l~ 165 (477)
T 2id5_A 160 EKCNLT 165 (477)
T ss_dssp ESCCCS
T ss_pred CCCcCc
Confidence 888665
No 51
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.4e-35 Score=331.02 Aligned_cols=173 Identities=29% Similarity=0.423 Sum_probs=125.8
Q ss_pred ccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCc
Q 041249 575 IGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIE 654 (789)
Q Consensus 575 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 654 (789)
+..+++|++|++++|++++. ..+..+++|++|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|+
T Consensus 217 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 290 (466)
T 1o6v_A 217 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 290 (466)
T ss_dssp GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCS
T ss_pred ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccC
Confidence 44566777788888877743 346777778888888888775543 7777788888888888775433 67777888
Q ss_pred EEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCc
Q 041249 655 VLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENK 734 (789)
Q Consensus 655 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 734 (789)
.|++++|++++..+ +..+++|++|+|++|++++..| +..+++|++|++++|++++. ..+..+++|+.|++++|+
T Consensus 291 ~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 291 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSC
T ss_pred eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCc
Confidence 88888888775443 6777788888888888776554 67777888888888887754 467777788888888888
Q ss_pred ccccCCcccccCCCCccEEEccCCcccc
Q 041249 735 IQGNIPLDYGFTLQNLQYFSIGTNRITG 762 (789)
Q Consensus 735 l~~~ip~~~~~~l~~L~~L~L~~N~l~~ 762 (789)
+++..| + ..+++|++|++++|++++
T Consensus 365 l~~~~~--~-~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 365 ISDLTP--L-ANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCBCGG--G-TTCTTCCEEECCCEEEEC
T ss_pred cCccch--h-hcCCCCCEEeccCCcccC
Confidence 875555 3 367778888888887775
No 52
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=8.4e-36 Score=334.47 Aligned_cols=185 Identities=21% Similarity=0.304 Sum_probs=107.4
Q ss_pred cccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCC
Q 041249 574 HIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKI 653 (789)
Q Consensus 574 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 653 (789)
.+..+++|++|++++|++++ +|.. +++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|
T Consensus 232 ~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L 299 (454)
T 1jl5_A 232 ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNL 299 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTC
T ss_pred ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcC
Confidence 36678888888888888885 4443 3678888888888885 4543 3778888888888885 2321 2578
Q ss_pred cEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCC
Q 041249 654 EVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGEN 733 (789)
Q Consensus 654 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 733 (789)
+.|++++|++++. +.. .++|++|++++|++++ +|.. +++|++|++++|+++ .+|. .+++|++|+|++|
T Consensus 300 ~~L~l~~N~l~~i-~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N 367 (454)
T 1jl5_A 300 YYLNASSNEIRSL-CDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYN 367 (454)
T ss_dssp CEEECCSSCCSEE-CCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSS
T ss_pred CEEECcCCcCCcc-cCC---cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCC
Confidence 8888888888753 211 2478888888888884 5543 478888888888888 4565 4678888888888
Q ss_pred cccc--cCCcccccCC-------------CCccEEEccCCcccc--cCcccccCCCCCCeeeccCCcCcccCC
Q 041249 734 KIQG--NIPLDYGFTL-------------QNLQYFSIGTNRITG--AIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 734 ~l~~--~ip~~~~~~l-------------~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
++++ .+|..+. .+ ++|++|++++|++++ .+|. .++.|.+.+|.+.+.+|
T Consensus 368 ~l~~l~~ip~~l~-~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~~ 433 (454)
T 1jl5_A 368 PLREFPDIPESVE-DLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERVVDPYE 433 (454)
T ss_dssp CCSSCCCCCTTCC-EEECCC-----------------------------------------------------
T ss_pred CCCcCCCChHHHH-hhhhcccccccccccCcCCEEECCCCcCCccccchh------hHhheeCcCcccCCccc
Confidence 8886 5776654 45 789999999999986 4443 35667788888877654
No 53
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.2e-36 Score=322.55 Aligned_cols=252 Identities=21% Similarity=0.260 Sum_probs=206.0
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.++|...+.||+|+||+||+|....+++.||||++........+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-----ELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC-----EEE
Confidence 468999999999999999999998899999999998776666788999999999999999999999998766 889
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCc
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGD 428 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 428 (789)
+||||+.+|+|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 94 lv~e~~~~~~L~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~D 159 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTET-----------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTD 159 (297)
T ss_dssp EEEECCTTCBHHHHHHHS-----------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECC
T ss_pred EEEECCCCCCHHHHHhhc-----------CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEee
Confidence 999999999999998532 4889999999999999999999998 99999999999999999999999
Q ss_pred ccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCc
Q 041249 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDH 508 (789)
Q Consensus 429 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 508 (789)
||++......... .....||..|+|||.+.+..++.++|||||||++|||++|+.||...... ...........+
T Consensus 160 fg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~-- 234 (297)
T 3fxz_A 160 FGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-RALYLIATNGTP-- 234 (297)
T ss_dssp CTTCEECCSTTCC--BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHHCSC--
T ss_pred CCCceecCCcccc--cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCC--
Confidence 9999877654422 23456999999999999999999999999999999999999999632110 001111111100
Q ss_pred hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 509 VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 509 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
... ....+...+.+++..|++.++..|++..+...+
T Consensus 235 -------~~~--------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 235 -------ELQ--------------------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp -------CCS--------------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -------CCC--------------------CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 000 011223445678889999999999999877553
No 54
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.2e-37 Score=326.55 Aligned_cols=254 Identities=24% Similarity=0.362 Sum_probs=206.1
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.++|...+.||+|+||+||+|.+..+++.||+|.+........+.+.+|++++++++||||+++++++.... ..+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK-----RLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC-----eeE
Confidence 467888999999999999999999899999999987666667788999999999999999999999998765 799
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCc
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGD 428 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 428 (789)
+||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 84 lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~D 151 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSM---------DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVAD 151 (310)
T ss_dssp EEEECCTTCBHHHHHHHC---------CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECC
T ss_pred EEEEecCCCcHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEee
Confidence 999999999999999643 356899999999999999999999998 99999999999999999999999
Q ss_pred ccccccCCCCCCcc------------ceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCC--
Q 041249 429 FGLARFLPPTHVQT------------SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD-- 494 (789)
Q Consensus 429 fgla~~~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~-- 494 (789)
||+++......... ......||+.|+|||.+.+..++.++||||||+++|||++|..|+.......
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~ 231 (310)
T 3s95_A 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD 231 (310)
T ss_dssp CTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT
T ss_pred cccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH
Confidence 99998775443211 1113569999999999999999999999999999999999999987542211
Q ss_pred --ccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 495 --MNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 495 --~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
...........+ ..+...+.+++..|++.++.+||+.......+
T Consensus 232 ~~~~~~~~~~~~~~----------------------------------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L 277 (310)
T 3s95_A 232 FGLNVRGFLDRYCP----------------------------------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWL 277 (310)
T ss_dssp SSBCHHHHHHHTCC----------------------------------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhhhhhccccccCC----------------------------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 111111111111 12233455788899999999999988775544
Q ss_pred c
Q 041249 573 P 573 (789)
Q Consensus 573 ~ 573 (789)
.
T Consensus 278 ~ 278 (310)
T 3s95_A 278 E 278 (310)
T ss_dssp H
T ss_pred H
Confidence 3
No 55
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.9e-36 Score=321.60 Aligned_cols=264 Identities=21% Similarity=0.210 Sum_probs=213.0
Q ss_pred ccccHHHHHHhhcC----------CCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCC
Q 041249 258 LNLSYQNLHNATDG----------FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR 327 (789)
Q Consensus 258 ~~~~~~~~~~~~~~----------f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ 327 (789)
..++++++..+++. |+..+.||+|+||.||+|....+++.||||++........+.+.+|++++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 46888898888875 66677999999999999999988999999999877666677899999999999999
Q ss_pred ccceeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCce
Q 041249 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITT 407 (789)
Q Consensus 328 niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iv 407 (789)
||+++++++.... ..++||||+.+|+|.+++.. ..+++.++..++.|++.||+|||+.+ |+
T Consensus 103 niv~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~-----------~~l~~~~~~~i~~qi~~~L~~LH~~~---iv 163 (321)
T 2c30_A 103 NVVEMYKSYLVGE-----ELWVLMEFLQGGALTDIVSQ-----------VRLNEEQIATVCEAVLQALAYLHAQG---VI 163 (321)
T ss_dssp TBCCEEEEEEETT-----EEEEEECCCCSCBHHHHHTT-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred CcceEEEEEEECC-----EEEEEEecCCCCCHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence 9999999998765 89999999999999999853 35899999999999999999999988 99
Q ss_pred ecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCC
Q 041249 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPS 487 (789)
Q Consensus 408 H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~ 487 (789)
||||||+||+++.++.+||+|||++......... .....||..|+|||.+.+..++.++||||||+++|||++|+.||
T Consensus 164 H~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf 241 (321)
T 2c30_A 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241 (321)
T ss_dssp CCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred cCCCCHHHEEECCCCcEEEeeeeeeeecccCccc--cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999877544321 23456999999999999999999999999999999999999999
Q ss_pred CccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccc
Q 041249 488 DIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKL 567 (789)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~ 567 (789)
..... ......+.... .+.+.. .......+.+++..|++.++..||+...
T Consensus 242 ~~~~~--~~~~~~~~~~~--------~~~~~~--------------------~~~~~~~l~~li~~~l~~dp~~Rps~~e 291 (321)
T 2c30_A 242 FSDSP--VQAMKRLRDSP--------PPKLKN--------------------SHKVSPVLRDFLERMLVRDPQERATAQE 291 (321)
T ss_dssp TTSCH--HHHHHHHHHSS--------CCCCTT--------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred CCCCH--HHHHHHHhcCC--------CCCcCc--------------------cccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 63211 11111111111 111100 0122334567788999999999999987
Q ss_pred ccccc
Q 041249 568 AGSIL 572 (789)
Q Consensus 568 ~~~~l 572 (789)
+..++
T Consensus 292 ll~hp 296 (321)
T 2c30_A 292 LLDHP 296 (321)
T ss_dssp HHTSG
T ss_pred HhcCh
Confidence 75543
No 56
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.8e-35 Score=330.48 Aligned_cols=133 Identities=18% Similarity=0.157 Sum_probs=105.6
Q ss_pred CCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCc
Q 041249 7 NRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQFRGSFP 86 (789)
Q Consensus 7 n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 86 (789)
....+..+.+++++++|++|++++|.|++. | .++.+++|++|+|++|+|++ +| ++.+++|++|+|++|++++ +|
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~ 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC
T ss_pred cCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee
Confidence 344556666788999999999999999964 6 68999999999999999996 44 8899999999999999985 44
Q ss_pred ccccCCCCCCEEeccCCCCCCcCCccccCCcccccccccCCCCCccceeecCCcccCCCchhhhcCcccccEEecccCCC
Q 041249 87 TEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDL 166 (789)
Q Consensus 87 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~l~~l~ls~N~l~~~~p~~~~~~~~l~~l~ls~N~~ 166 (789)
++.+++|++|++++|++++ +| ++.+++|++|++++|++. + ++ +..+++|+.|++++|+.
T Consensus 102 --~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~-------------~-l~--l~~l~~L~~L~l~~n~~ 160 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLT-------------E-ID--VSHNTQLTELDCHLNKK 160 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCS-------------C-CC--CTTCTTCCEEECTTCSC
T ss_pred --cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccc-------------e-ec--cccCCcCCEEECCCCCc
Confidence 8899999999999999986 44 777777777766666544 3 22 55666777777777754
No 57
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.5e-36 Score=325.77 Aligned_cols=254 Identities=20% Similarity=0.244 Sum_probs=203.7
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc-hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
++|...+.||+|+||+||+|.+..+++.||||++..... ...+.+.+|+++++.++||||+++++++.... ..+
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~ 81 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-----IQY 81 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEE
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----eEE
Confidence 688899999999999999999998999999999865433 23466889999999999999999999998765 889
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCc
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGD 428 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 428 (789)
+||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~D 148 (323)
T 3tki_A 82 LFLEYCSGGELFDRIEPD----------IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 148 (323)
T ss_dssp EEEECCTTEEGGGGSBTT----------TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECC
T ss_pred EEEEcCCCCcHHHHHhhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEE
Confidence 999999999999998643 56899999999999999999999998 99999999999999999999999
Q ss_pred ccccccCCCCCCccceeeecccccccCcccCCCCCc-CccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCC
Q 041249 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV-STNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPD 507 (789)
Q Consensus 429 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 507 (789)
||+++...............||..|+|||.+.+..+ +.++|||||||++|||++|+.||.........+..|.......
T Consensus 149 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 228 (323)
T 3tki_A 149 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228 (323)
T ss_dssp CTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS
T ss_pred eeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC
Confidence 999987654443333345679999999999987775 8899999999999999999999975443333333332211110
Q ss_pred chhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 508 HVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 508 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
. ........+.+++..|.+.++.+|++..++...
T Consensus 229 ~------------------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 N------------------------------PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp T------------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred C------------------------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0 001223345578889999999999998877543
No 58
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.3e-36 Score=326.49 Aligned_cols=268 Identities=22% Similarity=0.291 Sum_probs=206.5
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.++|...+.||+|+||+||+|++. ++.||||++.... ........|+..+++++||||+++++++..... .....+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS-VDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCC-CCceEE
Confidence 468889999999999999999986 7999999996543 334456679999999999999999999876441 123579
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC----------CCCCceecCCCCCceec
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD----------CQPITTHCDLKPSNILL 418 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~----------~~~~ivH~dlk~~Nill 418 (789)
+||||+.+|+|.+++... .+++.++..++.|++.||+|||+. + |+||||||+||++
T Consensus 99 lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill 164 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN-----------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLL 164 (322)
T ss_dssp EEEECCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEE
T ss_pred EEEecCCCCCHHHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEE
Confidence 999999999999999543 489999999999999999999988 6 9999999999999
Q ss_pred CCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCC-----CCcCccccchhhHHHHHHHHHhcCCCCccccC
Q 041249 419 DEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-----SEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493 (789)
Q Consensus 419 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~ 493 (789)
+.++.+||+|||+++...............||..|+|||.+.+ ..++.++|||||||++|||++|+.||......
T Consensus 165 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~ 244 (322)
T 3soc_A 165 KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244 (322)
T ss_dssp CTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCC
T ss_pred CCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcch
Confidence 9999999999999987765544333344679999999999876 35778999999999999999999999754332
Q ss_pred Cc-----------cHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEecc
Q 041249 494 DM-----------NLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDL 562 (789)
Q Consensus 494 ~~-----------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l 562 (789)
.. ....+........ ..+.+. ..+....+...+.+++..|++.++.+|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----------------~~~~~~~~~~~l~~li~~cl~~dP~~R 303 (322)
T 3soc_A 245 YMLPFEEEIGQHPSLEDMQEVVVHKK----KRPVLR-----------------DYWQKHAGMAMLCETIEECWDHDAEAR 303 (322)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSC----CCCCCC-----------------GGGGSSHHHHHHHHHHHHHTCSSGGGS
T ss_pred hccchhhhhccCCchhhhhhhhhccc----CCCCcc-----------------ccccccchHHHHHHHHHHHccCChhhC
Confidence 11 1111111111110 011111 011223456678899999999999999
Q ss_pred Ccccccccccccc
Q 041249 563 ESLKLAGSILPHI 575 (789)
Q Consensus 563 ~s~~~~~~~l~~l 575 (789)
|+..++...+..+
T Consensus 304 ps~~ell~~L~~l 316 (322)
T 3soc_A 304 LSAGCVGERITQM 316 (322)
T ss_dssp CCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHH
Confidence 9998876555444
No 59
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.2e-35 Score=330.51 Aligned_cols=193 Identities=19% Similarity=0.204 Sum_probs=143.4
Q ss_pred ccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCc
Q 041249 575 IGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIE 654 (789)
Q Consensus 575 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 654 (789)
+..+++|+.|+|++|++++..+..|..+++|++|++++|.+.+.+|..+....+|++|++++|+|+...+..|..+++|+
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 251 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLR 251 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCC
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccC
Confidence 44567788888888888877777788888888888888877777777666667888888888888855445778888888
Q ss_pred EEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCc
Q 041249 655 VLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENK 734 (789)
Q Consensus 655 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 734 (789)
.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 331 (477)
T 2id5_A 252 FLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNP 331 (477)
T ss_dssp EEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSC
T ss_pred eeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCC
Confidence 88888888887777788888888888888888887778888888888888888888887666777888888888888888
Q ss_pred ccccCCcccccCCCCccEEEccCCcccccCccccc
Q 041249 735 IQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSIS 769 (789)
Q Consensus 735 l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 769 (789)
+....+..++ ...+..+.+.++......|..+.
T Consensus 332 l~c~c~~~~~--~~~~~~~~~~~~~~~C~~p~~~~ 364 (477)
T 2id5_A 332 LACDCRLLWV--FRRRWRLNFNRQQPTCATPEFVQ 364 (477)
T ss_dssp EECSGGGHHH--HTTTTSSCCTTCCCBEEESGGGT
T ss_pred ccCccchHhH--HhhhhccccCccCceeCCchHHc
Confidence 8744333332 12233344555554434444443
No 60
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3.3e-34 Score=323.85 Aligned_cols=186 Identities=26% Similarity=0.415 Sum_probs=152.7
Q ss_pred cccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCC
Q 041249 574 HIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKI 653 (789)
Q Consensus 574 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 653 (789)
.+..+++|++|++++|++++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|
T Consensus 238 ~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 311 (466)
T 1o6v_A 238 TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNL 311 (466)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTC
T ss_pred hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCC
Confidence 46678899999999999997655 8999999999999999996544 8899999999999999996544 8899999
Q ss_pred cEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCC
Q 041249 654 EVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGEN 733 (789)
Q Consensus 654 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 733 (789)
+.|+|++|++++..| +..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|
T Consensus 312 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 385 (466)
T 1o6v_A 312 TYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 385 (466)
T ss_dssp SEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCE
T ss_pred CEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCC
Confidence 999999999997765 78999999999999999964 479999999999999999998777 899999999999999
Q ss_pred cccccCCcccc------cCCCCccEEEccCCcccc----cCcccccCCC
Q 041249 734 KIQGNIPLDYG------FTLQNLQYFSIGTNRITG----AIPPSISNAS 772 (789)
Q Consensus 734 ~l~~~ip~~~~------~~l~~L~~L~L~~N~l~~----~~~~~~~~l~ 772 (789)
+++ .+|..+. ..+.++..+.++.+.+++ ..|.++-+++
T Consensus 386 ~~~-~~p~~~~~~~~ip~~~~~~~~~~~~~~~is~~g~~~~~~~~w~~~ 433 (466)
T 1o6v_A 386 AWT-NAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLP 433 (466)
T ss_dssp EEE-CCCBCCCSEEEEECCCBCTTSCBCCCSEESTTCEEETTEEEEECC
T ss_pred ccc-CCchhhcccceecccccccCCCeecCceecCCcEEeCCceEECCC
Confidence 999 5565432 113344444555555543 3555555544
No 61
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6.8e-36 Score=332.33 Aligned_cols=213 Identities=22% Similarity=0.266 Sum_probs=185.6
Q ss_pred cccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcCCCCccceeeee
Q 041249 259 NLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSIRHRNLVKVFTA 335 (789)
Q Consensus 259 ~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 335 (789)
.+.+.++..++++|...++||+|+||+||+|++..+++.||+|+++.. .......+.+|+.++..++||||++++++
T Consensus 63 ~~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~ 142 (437)
T 4aw2_A 63 TSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYA 142 (437)
T ss_dssp HHHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred cchhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 345677778899999999999999999999999989999999999643 22233458899999999999999999999
Q ss_pred eccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCc
Q 041249 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSN 415 (789)
Q Consensus 336 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~N 415 (789)
|.... ..++||||+.+|+|.+++... ...+++..+..++.|++.||+|||+.+ ||||||||+|
T Consensus 143 ~~~~~-----~~~lV~Ey~~gg~L~~~l~~~---------~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~N 205 (437)
T 4aw2_A 143 FQDDN-----NLYLVMDYYVGGDLLTLLSKF---------EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDN 205 (437)
T ss_dssp EECSS-----EEEEEECCCTTCBHHHHHHTT---------TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGG
T ss_pred EeeCC-----EEEEEEecCCCCcHHHHHHHc---------cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHH
Confidence 98766 899999999999999999642 356899999999999999999999998 9999999999
Q ss_pred eecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCC-----CCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 416 ILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL-----GSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 416 ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
||++.++++||+|||+++........ ......||+.|+|||++. .+.++.++|||||||++|||++|+.||..
T Consensus 206 ILl~~~g~vkL~DFGla~~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 283 (437)
T 4aw2_A 206 ILMDMNGHIRLADFGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283 (437)
T ss_dssp EEECTTSCEEECCCTTCEECCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred eeEcCCCCEEEcchhhhhhcccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999876544321 223357999999999986 56799999999999999999999999973
No 62
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.7e-36 Score=322.28 Aligned_cols=250 Identities=20% Similarity=0.276 Sum_probs=202.2
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc--cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
..++|...+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+++++.++||||+++++++....
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----- 87 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK----- 87 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----
Confidence 346899999999999999999999889999999998654 2334567889999999999999999999987665
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~----------~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~k 154 (328)
T 3fe3_A 88 TLYLIMEYASGGEVFDYLVAH----------GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIK 154 (328)
T ss_dssp EEEEEECCCTTCBHHHHHHHH----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEE
T ss_pred EEEEEEECCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEE
Confidence 899999999999999998543 45899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcC-ccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHh
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVS-TNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 504 (789)
|+|||+++....... .....||+.|+|||.+.+..++ +++|||||||++|||++|+.||+.. +........
T Consensus 155 l~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~~~~i 226 (328)
T 3fe3_A 155 IADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-----NLKELRERV 226 (328)
T ss_dssp ECSTTCCGGGSSSCG---GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHH
T ss_pred EeeccCceecCCCCc---cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC-----CHHHHHHHH
Confidence 999999987654432 2345699999999999887764 8999999999999999999999732 222222211
Q ss_pred CCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 505 LPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 505 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.... ..+. ......+.++...|.+.++..|++..++..+
T Consensus 227 ~~~~------~~~p----------------------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 227 LRGK------YRIP----------------------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHCC------CCCC----------------------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HhCC------CCCC----------------------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1100 0000 0112334577888999999999999887554
No 63
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.4e-35 Score=319.61 Aligned_cols=201 Identities=23% Similarity=0.296 Sum_probs=178.0
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
-++|...+.||+|+||.||+|....+++.||+|+++.. .......+.+|+++++.++||||+++++++....
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----- 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD----- 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS-----
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC-----
Confidence 36788899999999999999999989999999999654 2334567889999999999999999999998766
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++... ..+++.++..++.||+.||+|||+.+ |+||||||+||+++.++++|
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vk 145 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRE----------RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIK 145 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHH----------SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEE
Confidence 899999999999999998643 46899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 146 L~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 207 (337)
T 1o6l_A 146 ITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207 (337)
T ss_dssp ECCCTTCBCSCCTTC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EeeccchhhcccCCC--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC
Confidence 999999986443321 22345699999999999999999999999999999999999999973
No 64
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.5e-36 Score=322.62 Aligned_cols=253 Identities=22% Similarity=0.251 Sum_probs=194.4
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
..++|...+.||+|+||+||+|.+..+++.||||++.... ......+.+|++++++++||||+++++++.... .
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-----~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN-----K 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSS-----E
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-----E
Confidence 3578889999999999999999999899999999986543 234567899999999999999999999997765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+++|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||++++++.+||
T Consensus 83 ~~lv~E~~~gg~L~~~l~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL 149 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIISQ----------DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKL 149 (347)
T ss_dssp EEEEEECCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEE
Confidence 99999999999999998543 46899999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCc-CccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV-STNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
+|||++......... ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||+.. +.....+...
T Consensus 150 ~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~-----~~~~~~~~i~ 223 (347)
T 3zgw_A 150 IDFGLCAKPKGNKDY-HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD-----NVMALYKKIM 223 (347)
T ss_dssp CCCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHH
T ss_pred EeccCcccccCCCCc-cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHH
Confidence 999998866543321 2234569999999999988775 89999999999999999999999732 2222221111
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
... ..+. ......+.+++..|.+.++..|++..++..++
T Consensus 224 ~~~------~~~p----------------------~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 224 RGK------YDVP----------------------KWLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp HTC------CCCC----------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred cCC------CCCC----------------------CCCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 000 0000 01122345678889999999999988775543
No 65
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.7e-35 Score=321.06 Aligned_cols=201 Identities=27% Similarity=0.386 Sum_probs=177.8
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
-++|...+.||+|+||.||+|....+++.||+|++... .....+.+.+|+++++.++||||+++++++....
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----- 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE----- 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 36788999999999999999999999999999998643 2334567889999999999999999999998766
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++++|
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~----------~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vk 155 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQN----------VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVH 155 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHTT----------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEE
Confidence 899999999999999999643 56899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCC---CCcCccccchhhHHHHHHHHHhcCCCCcc
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG---SEVSTNGDVYSYGILMLELIIRKKPSDIM 490 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~DV~sfGvvl~elltG~~P~~~~ 490 (789)
|+|||+++...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 156 L~DFG~a~~~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~ 220 (384)
T 4fr4_A 156 ITDFNIAAMLPRET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR 220 (384)
T ss_dssp ECCCTTCEECCTTC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred EeccceeeeccCCC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC
Confidence 99999999875443 2234669999999999874 35899999999999999999999999743
No 66
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.9e-35 Score=318.98 Aligned_cols=254 Identities=19% Similarity=0.180 Sum_probs=203.3
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccch------hhHHHHHHHHHHhcCCCCccceeeeeeccCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR------ASRSFIAECRALRSIRHRNLVKVFTACSGVDYQ 342 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 342 (789)
.+.|...+.||+|+||.||+|....+++.||+|+++..... ....+.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-- 88 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT-- 88 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--
Confidence 46788999999999999999999999999999999755322 2467999999999999999999999997765
Q ss_pred CCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC
Q 041249 343 GNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM 422 (789)
Q Consensus 343 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~ 422 (789)
..++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++
T Consensus 89 ---~~~lv~e~~~gg~L~~~l~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~ 152 (361)
T 2yab_A 89 ---DVVLILELVSGGELFDFLAQK----------ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKN 152 (361)
T ss_dssp ---EEEEEEECCCSCBHHHHHTTC----------SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTT
T ss_pred ---EEEEEEEcCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCC
Confidence 899999999999999999643 46899999999999999999999998 99999999999998877
Q ss_pred ----ceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHH
Q 041249 423 ----VSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498 (789)
Q Consensus 423 ----~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~ 498 (789)
.+||+|||+++....... .....||+.|+|||.+....++.++|||||||++|+|++|+.||.... ..
T Consensus 153 ~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~-----~~ 224 (361)
T 2yab_A 153 IPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQ 224 (361)
T ss_dssp SSSCCEEECCCSSCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HH
T ss_pred CCccCEEEEecCCceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HH
Confidence 799999999988765432 234569999999999998899999999999999999999999997321 11
Q ss_pred HHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 499 NFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 499 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
........ ....... .........+.+++..|...++..|++..+...++
T Consensus 225 ~~~~~i~~--------~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp 274 (361)
T 2yab_A 225 ETLANITA--------VSYDFDE----------------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (361)
T ss_dssp HHHHHHHT--------TCCCCCH----------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred HHHHHHHh--------cCCCCCc----------------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 11111100 0000000 00012233456788899999999999998775543
No 67
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-35 Score=314.32 Aligned_cols=254 Identities=21% Similarity=0.243 Sum_probs=204.4
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.++|...+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+++++.++||||+++++++.... ..+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESME-----ELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT-----EEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC-----EEE
Confidence 367888999999999999999999999999999987443 34567889999999999999999999997766 899
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC--CCceee
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE--EMVSHV 426 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl 426 (789)
+||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++. ++.+||
T Consensus 78 lv~e~~~g~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl 145 (321)
T 1tki_A 78 MIFEFISGLDIFERINTS---------AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKI 145 (321)
T ss_dssp EEECCCCCCBHHHHHTSS---------SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEE
T ss_pred EEEEeCCCCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEE
Confidence 999999999999999643 346899999999999999999999998 999999999999987 789999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALP 506 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 506 (789)
+|||+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... .......
T Consensus 146 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i-- 215 (321)
T 1tki_A 146 IEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-----QQIIENI-- 215 (321)
T ss_dssp CCCTTCEECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHH--
T ss_pred EECCCCeECCCCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHHH--
Confidence 9999999876543 23345689999999999988899999999999999999999999973211 1111111
Q ss_pred CchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 507 DHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 507 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
........ ..........+.+++..|.+.++..|++..+...++
T Consensus 216 ------~~~~~~~~----------------~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 216 ------MNAEYTFD----------------EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp ------HHTCCCCC----------------HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ------HcCCCCCC----------------hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 00000000 000112234566888899999999999998875543
No 68
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.1e-35 Score=325.30 Aligned_cols=265 Identities=20% Similarity=0.309 Sum_probs=205.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEc-------CCceEEEEEEeccccc-hhhHHHHHHHHHHhcC-CCCccceeeeeeccC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLD-------EGRTTVTVKVFNLHHH-RASRSFIAECRALRSI-RHRNLVKVFTACSGV 339 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 339 (789)
.++|...+.||+|+||.||+|.+. .++..||||+++.... ...+.+.+|+++++++ +||||++++++|...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467888999999999999999874 3467899999975533 3456799999999999 899999999999765
Q ss_pred CCCCCceEEEEeeccCCCChhhhccCCCCCc------cccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCC
Q 041249 340 DYQGNDFKALVYEFMQNGSLEEWLYPVNRED------EVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKP 413 (789)
Q Consensus 340 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~ 413 (789)
. ..++||||+.+|+|.+++....... ........+++.++..++.|++.||+|||+.+ |+||||||
T Consensus 160 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp 231 (370)
T 2psq_A 160 G-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAA 231 (370)
T ss_dssp S-----SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCG
T ss_pred C-----CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccch
Confidence 5 7899999999999999997542110 00112346899999999999999999999998 99999999
Q ss_pred CceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCcccc
Q 041249 414 SNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFE 492 (789)
Q Consensus 414 ~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~ 492 (789)
+|||++.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred hhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999999999997765443333334557889999999999999999999999999999999 9999974211
Q ss_pred CCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 493 GDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
..+...+...... .....+...+.+++..|++.++..||+..+....+
T Consensus 312 --~~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L 359 (370)
T 2psq_A 312 --EELFKLLKEGHRM------------------------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359 (370)
T ss_dssp --GGHHHHHHTTCCC------------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred --HHHHHHHhcCCCC------------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1122221111100 00113344567888899999999999998875544
Q ss_pred c
Q 041249 573 P 573 (789)
Q Consensus 573 ~ 573 (789)
.
T Consensus 360 ~ 360 (370)
T 2psq_A 360 D 360 (370)
T ss_dssp H
T ss_pred H
Confidence 4
No 69
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=6.3e-36 Score=326.16 Aligned_cols=278 Identities=21% Similarity=0.234 Sum_probs=213.8
Q ss_pred ccccHHHHHHhhcCCCCCCcccccCCccEEEEEE-----cCCceEEEEEEeccccc-hhhHHHHHHHHHHhcC-CCCccc
Q 041249 258 LNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHH-RASRSFIAECRALRSI-RHRNLV 330 (789)
Q Consensus 258 ~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv 330 (789)
..+...+++...++|...+.||+|+||.||+|.+ ..+++.||||+++.... ...+.+.+|++++.++ +||||+
T Consensus 10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence 3456677778889999999999999999999994 44568999999976533 3456799999999999 799999
Q ss_pred eeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCcc---------------------------------------
Q 041249 331 KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDE--------------------------------------- 371 (789)
Q Consensus 331 ~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~--------------------------------------- 371 (789)
++++++.... ...++||||+.+|+|.+++........
T Consensus 90 ~~~~~~~~~~----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (359)
T 3vhe_A 90 NLLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASS 165 (359)
T ss_dssp CEEEEECSTT----SCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------
T ss_pred eeeeeeecCC----CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccc
Confidence 9999987643 247999999999999999976522100
Q ss_pred -----------------ccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCccccccc
Q 041249 372 -----------------VDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF 434 (789)
Q Consensus 372 -----------------~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 434 (789)
.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 242 (359)
T 3vhe_A 166 GFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARD 242 (359)
T ss_dssp ------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSC
T ss_pred ccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceee
Confidence 0001223899999999999999999999998 99999999999999999999999999997
Q ss_pred CCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHHhCCCchhhhc
Q 041249 435 LPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARMALPDHVMDIV 513 (789)
Q Consensus 435 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (789)
..............||..|+|||.+.+..++.++|||||||++|||++ |+.||...... ..+...+.........
T Consensus 243 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~--- 318 (359)
T 3vhe_A 243 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRMRAP--- 318 (359)
T ss_dssp TTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHHTCCCCCC---
T ss_pred ecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh-HHHHHHHHcCCCCCCC---
Confidence 765544444445668899999999998899999999999999999998 99999743221 1122222211111000
Q ss_pred cCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 514 DSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 514 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
..+...+.+++..|++.++.+||+..++...+.
T Consensus 319 ---------------------------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 319 ---------------------------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp ---------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---------------------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 112334567888999999999999987755443
No 70
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.5e-35 Score=317.31 Aligned_cols=204 Identities=24% Similarity=0.373 Sum_probs=177.7
Q ss_pred HHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcC-CCCccceeeeeeccCCC
Q 041249 266 HNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSI-RHRNLVKVFTACSGVDY 341 (789)
Q Consensus 266 ~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 341 (789)
....++|...+.||+|+||.||+|++..+++.||||+++... ......+..|.+++..+ +||||+++++++....
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~- 91 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE- 91 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS-
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC-
Confidence 345678999999999999999999999899999999996542 33456678899999877 9999999999998766
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE 421 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~ 421 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.+
T Consensus 92 ----~~~lv~E~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~ 154 (345)
T 1xjd_A 92 ----NLFFVMEYLNGGDLMYHIQSC----------HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKD 154 (345)
T ss_dssp ----EEEEEEECCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTT
T ss_pred ----EEEEEEeCCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCC
Confidence 899999999999999998643 46899999999999999999999998 9999999999999999
Q ss_pred CceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 422 MVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 422 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
+++||+|||+++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 155 g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 220 (345)
T 1xjd_A 155 GHIKIADFGMCKENMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220 (345)
T ss_dssp SCEEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCEEEeEChhhhhcccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC
Confidence 9999999999986543321 23346799999999999999999999999999999999999999973
No 71
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.6e-36 Score=331.27 Aligned_cols=259 Identities=24% Similarity=0.302 Sum_probs=204.3
Q ss_pred HHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc-hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 266 HNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 266 ~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
+...++|...+.||+|+||+||+|.+..+++.||||+++.... .....+.+|++++++++||||++++++|....
T Consensus 110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---- 185 (377)
T 3cbl_A 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ---- 185 (377)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC----
Confidence 3445788889999999999999999998899999999875432 33457889999999999999999999997655
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+++|+|.+++... +..+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+
T Consensus 186 -~~~lv~e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~ 252 (377)
T 3cbl_A 186 -PIYIVMELVQGGDFLTFLRTE---------GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVL 252 (377)
T ss_dssp -SCEEEEECCTTCBHHHHHHHH---------GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCE
T ss_pred -CcEEEEEcCCCCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcE
Confidence 689999999999999998643 245899999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHH
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 503 (789)
||+|||+++...............++..|+|||.+..+.++.++|||||||++|||++ |+.||..... ......+..
T Consensus 253 kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--~~~~~~~~~ 330 (377)
T 3cbl_A 253 KISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--QQTREFVEK 330 (377)
T ss_dssp EECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--HHHHHHHHT
T ss_pred EECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHc
Confidence 9999999987554322111122335678999999998899999999999999999998 9999973211 111111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
.... .....|...+.+++..|++.++.+||+...+...+.
T Consensus 331 ~~~~------------------------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 331 GGRL------------------------------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp TCCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC------------------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 1000 001123445678889999999999999987754443
No 72
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=321.65 Aligned_cols=201 Identities=27% Similarity=0.350 Sum_probs=173.7
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~ 344 (789)
.++|...+.||+|+||+||+|+...+++.||||+++.. .......+..|.+++..+ +||||+++++++....
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 97 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD---- 97 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC----
Confidence 46899999999999999999999989999999999654 233456688899999988 7999999999998766
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++++
T Consensus 98 -~~~lv~E~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~i 163 (353)
T 3txo_A 98 -RLFFVMEFVNGGDLMFHIQKS----------RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHC 163 (353)
T ss_dssp -EEEEEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCE
T ss_pred -EEEEEEeCCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCE
Confidence 899999999999999998643 56899999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 164 kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 226 (353)
T 3txo_A 164 KLADFGMCKEGICNGV--TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226 (353)
T ss_dssp EECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEccccceeecccCCc--cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC
Confidence 9999999986443321 23345799999999999888899999999999999999999999973
No 73
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.3e-35 Score=311.21 Aligned_cols=261 Identities=21% Similarity=0.307 Sum_probs=199.0
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhc--CCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRS--IRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||+||+|.+ +++.||||++... ....+..|.+++.. ++||||+++++++.... .....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~-~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSR-HSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE-TTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeecccc-CCCce
Confidence 56899999999999999999998 4899999998643 23445556666555 79999999999876532 12235
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhh--------cCCCCCceecCCCCCceec
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLH--------HDCQPITTHCDLKPSNILL 418 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~ivH~dlk~~Nill 418 (789)
.++||||+.+|+|.+++.. ..+++..+..++.|++.||+||| ..+ |+||||||+||++
T Consensus 81 ~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill 146 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQL-----------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILV 146 (301)
T ss_dssp EEEEECCCTTCBHHHHHTT-----------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEE
T ss_pred eEEehhhccCCCHHHHHhh-----------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEE
Confidence 8999999999999999943 35899999999999999999999 666 9999999999999
Q ss_pred CCCCceeeCcccccccCCCCCCcc--ceeeecccccccCcccCCCC------CcCccccchhhHHHHHHHHHh-------
Q 041249 419 DEEMVSHVGDFGLARFLPPTHVQT--SSIGVKGSIGYIAPEYGLGS------EVSTNGDVYSYGILMLELIIR------- 483 (789)
Q Consensus 419 ~~~~~~kl~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~sfGvvl~elltG------- 483 (789)
+.++.+||+|||+++......... ......||..|+|||.+... .+++++|||||||++|||++|
T Consensus 147 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~ 226 (301)
T 3q4u_A 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226 (301)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred cCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccc
Confidence 999999999999998765544221 12234699999999998876 567899999999999999999
Q ss_pred ---cCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEe
Q 041249 484 ---KKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTIL 560 (789)
Q Consensus 484 ---~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l 560 (789)
+.||..............+...... ..+.+.. .+....+...+.+++..|++.++.
T Consensus 227 ~~~~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----------------~~~~~~~~~~l~~li~~cl~~dP~ 285 (301)
T 3q4u_A 227 EDYKPPFYDVVPNDPSFEDMRKVVCVDQ----QRPNIPN-----------------RWFSDPTLTSLAKLMKECWYQNPS 285 (301)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCG-----------------GGGGSHHHHHHHHHHHHHCCSSGG
T ss_pred ccccccccccCCCCcchhhhhHHHhccC----CCCCCCh-----------------hhccCccHHHHHHHHHHHhhcChh
Confidence 7787655444444444433222211 0111110 111224566788999999999999
Q ss_pred ccCccccccc
Q 041249 561 DLESLKLAGS 570 (789)
Q Consensus 561 ~l~s~~~~~~ 570 (789)
+||+...+..
T Consensus 286 ~Rps~~~i~~ 295 (301)
T 3q4u_A 286 ARLTALRIKK 295 (301)
T ss_dssp GSCCHHHHHH
T ss_pred hCCCHHHHHH
Confidence 9999887744
No 74
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=9.6e-36 Score=317.49 Aligned_cols=263 Identities=25% Similarity=0.348 Sum_probs=195.6
Q ss_pred HHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 041249 263 QNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVD 340 (789)
Q Consensus 263 ~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 340 (789)
.++....++|...+.||+|+||+||+|.+. ++.||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence 344455678899999999999999999874 8899999986553 233467899999999999999999999987655
Q ss_pred CCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC
Q 041249 341 YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE 420 (789)
Q Consensus 341 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~ 420 (789)
..++||||+.+|+|.+++... .....+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.
T Consensus 108 -----~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~ 174 (309)
T 3p86_A 108 -----NLSIVTEYLSRGSLYRLLHKS-------GAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDK 174 (309)
T ss_dssp -----CCEEEEECCTTCBHHHHHHST-------THHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECT
T ss_pred -----ceEEEEecCCCCcHHHHHhhc-------CCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeC
Confidence 789999999999999999754 11234899999999999999999999874 45999999999999999
Q ss_pred CCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHH
Q 041249 421 EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNF 500 (789)
Q Consensus 421 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~ 500 (789)
++.+||+|||+++....... ......||..|+|||.+.+..++.++|||||||++|||++|+.||...... .....
T Consensus 175 ~~~~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~ 250 (309)
T 3p86_A 175 KYTVKVCDFGLSRLKASTFL--SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAA 250 (309)
T ss_dssp TCCEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHH
T ss_pred CCcEEECCCCCCcccccccc--ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence 99999999999986544321 123456999999999999999999999999999999999999999732111 11111
Q ss_pred HHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 501 ARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 501 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
+...... ..+ ...+...+.+++..|++.++.+||+...+...+.
T Consensus 251 ~~~~~~~-------~~~----------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 251 VGFKCKR-------LEI----------------------PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp HHHSCCC-------CCC----------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcCCC-------CCC----------------------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1101000 000 0122345668888999999999999987755443
No 75
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.2e-35 Score=318.14 Aligned_cols=254 Identities=20% Similarity=0.259 Sum_probs=202.8
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||.||+|....+++.||+|++.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-----~ 102 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES-----F 102 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----E
Confidence 467999999999999999999999899999999996543 234567899999999999999999999998765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC---c
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM---V 423 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~---~ 423 (789)
.++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.+. .
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~ 169 (362)
T 2bdw_A 103 HYLVFDLVTGGELFEDIVAR----------EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAA 169 (362)
T ss_dssp EEEEECCCCSCBHHHHHTTC----------SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCC
T ss_pred EEEEEecCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCC
Confidence 89999999999999998643 46899999999999999999999998 99999999999998654 5
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
+||+|||++........ .....||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ..+...+..
T Consensus 170 ~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i~~ 244 (362)
T 2bdw_A 170 VKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKA 244 (362)
T ss_dssp EEECCCTTCBCCTTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH
T ss_pred EEEeecCcceEecCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHh
Confidence 99999999987764432 2345699999999999988999999999999999999999999963211 111111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
.... .. ......+...+.+++..|.+.++..|++......++
T Consensus 245 ~~~~----~~-----------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 286 (362)
T 2bdw_A 245 GAYD----YP-----------------------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 286 (362)
T ss_dssp TCCC----CC-----------------------TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSH
T ss_pred CCCC----CC-----------------------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 1000 00 000012234556788899999999999998776543
No 76
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.6e-35 Score=313.84 Aligned_cols=259 Identities=27% Similarity=0.361 Sum_probs=195.9
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
..++|...+.||+|+||+||+|.+. ..+|+|+++... ....+.+.+|++++++++||||+++++++...
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 104 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD------ 104 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------
T ss_pred cccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC------
Confidence 3468889999999999999999875 358888886543 33457799999999999999999999987532
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||++++++.+|
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~k 172 (307)
T 3lb7_A 105 NLAIVTQWCEGSSLYKHLHVQ---------ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVK 172 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTS---------CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEE
T ss_pred cEEEEEecCCCCcHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEE
Confidence 478999999999999998643 356899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCC---CCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHH
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL---GSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~ 502 (789)
|+|||+++...............||..|+|||.+. ...++.++|||||||++|||++|+.||....... .....+.
T Consensus 173 l~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~-~~~~~~~ 251 (307)
T 3lb7_A 173 IGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVG 251 (307)
T ss_dssp ECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHH
T ss_pred EccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH-HHHHHHh
Confidence 99999998765433333334457999999999875 5678999999999999999999999997432211 1111111
Q ss_pred HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccccc
Q 041249 503 MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPH 574 (789)
Q Consensus 503 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~ 574 (789)
.... .+.+.. ....|...+.+++..|++.++.+||+...+...+..
T Consensus 252 ~~~~-------~~~~~~-------------------~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~ 297 (307)
T 3lb7_A 252 RGYA-------SPDLSK-------------------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp HTCC-------CCCSTT-------------------SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred cCCC-------Ccchhh-------------------hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence 1111 111100 011334566788899999999999999887554443
No 77
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.9e-35 Score=323.51 Aligned_cols=257 Identities=24% Similarity=0.386 Sum_probs=191.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEc---CCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLD---EGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
.++|...+.||+|+||+||+|++. .++..||||+++... ....+.+.+|++++++++||||+++++++....
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 119 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK---- 119 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC----
Confidence 468999999999999999999986 457789999997553 334567999999999999999999999997655
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+++|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 120 -~~~lv~e~~~~~sL~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 186 (373)
T 2qol_A 120 -PVMIVTEYMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVC 186 (373)
T ss_dssp -SCEEEEECCTTCBHHHHHHTT---------TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCE
T ss_pred -ceEEEEeCCCCCcHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCE
Confidence 789999999999999999643 346899999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCCc-cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHH
Q 041249 425 HVGDFGLARFLPPTHVQ-TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFAR 502 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 502 (789)
||+|||+++........ .......++..|+|||.+....++.++|||||||++|||++ |+.||.... ..+..+
T Consensus 187 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~-----~~~~~~ 261 (373)
T 2qol_A 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-----NQDVIK 261 (373)
T ss_dssp EECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC-----HHHHHH
T ss_pred EECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHH
Confidence 99999999987654321 12223346778999999998899999999999999999998 999996321 111111
Q ss_pred HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccccc
Q 041249 503 MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPH 574 (789)
Q Consensus 503 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~ 574 (789)
.. +...+. .....+...+.+++..|++.++.+||++..+...+..
T Consensus 262 ~i---------~~~~~~------------------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~ 306 (373)
T 2qol_A 262 AV---------DEGYRL------------------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306 (373)
T ss_dssp HH---------HTTEEC------------------CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HH---------HcCCCC------------------CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHH
Confidence 11 100000 0011334567788999999999999999887654443
No 78
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=318.64 Aligned_cols=256 Identities=23% Similarity=0.345 Sum_probs=200.0
Q ss_pred cCCCCCCcccccCCccEEEEEEcCC---ceEEEEEEeccc-cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEG---RTTVTVKVFNLH-HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
++|...+.||+|+||+||+|.+..+ +..||||+++.. .....+.+.+|++++++++||||+++++++....
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 123 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR----- 123 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG-----
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 5677789999999999999999744 445999999755 3344567999999999999999999999987655
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~k 191 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRTH---------DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCK 191 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHTT---------TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEE
T ss_pred ccEEEeeCCCCCcHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEE
Confidence 789999999999999999543 346899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCc-cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHH
Q 041249 426 VGDFGLARFLPPTHVQ-TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 503 (789)
|+|||+++........ .......+|..|+|||.+....++.++|||||||++|||++ |+.||..... ......+..
T Consensus 192 l~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~~ 269 (325)
T 3kul_A 192 VSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVISSVEE 269 (325)
T ss_dssp ECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HHHHHHHHT
T ss_pred ECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHc
Confidence 9999999987654422 22233456788999999988899999999999999999999 9999963211 111111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPH 574 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~ 574 (789)
.... .....+...+.+++..|++.++.+||+...+...+..
T Consensus 270 ~~~~------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~ 310 (325)
T 3kul_A 270 GYRL------------------------------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310 (325)
T ss_dssp TCCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCC------------------------------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1000 0011234456688899999999999999887655443
No 79
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.8e-35 Score=309.89 Aligned_cols=201 Identities=23% Similarity=0.400 Sum_probs=172.3
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
++|...+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|++.+++++||||+++++++.... .
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~-----~ 85 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD-----C 85 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS-----E
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC-----e
Confidence 57888999999999999999999899999999985432 233567899999999999999999999987665 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 86 ~~lv~e~~~g~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl 152 (294)
T 4eqm_A 86 YYLVMEYIEGPTLSEYIESH----------GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKI 152 (294)
T ss_dssp EEEEEECCCSCBHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEE
Confidence 99999999999999998643 46899999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 153 ~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~ 214 (294)
T 4eqm_A 153 FDFGIAKALSETSLT-QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214 (294)
T ss_dssp CCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCS
T ss_pred EeCCCcccccccccc-ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 999999876543321 22345699999999999998999999999999999999999999973
No 80
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.6e-35 Score=326.91 Aligned_cols=209 Identities=22% Similarity=0.309 Sum_probs=181.8
Q ss_pred cHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcCCCCccceeeeeec
Q 041249 261 SYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSIRHRNLVKVFTACS 337 (789)
Q Consensus 261 ~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 337 (789)
.+.++....++|...+.||+|+||+||+|+...+++.||+|+++.. .......+.+|+++++.++||||+++++++.
T Consensus 60 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 139 (410)
T 3v8s_A 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 139 (410)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred HHHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 3456677789999999999999999999999989999999998643 2233456889999999999999999999998
Q ss_pred cCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCcee
Q 041249 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNIL 417 (789)
Q Consensus 338 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nil 417 (789)
... ..++||||+.+|+|.+++... .+++..+..++.|++.||+|||+.+ ||||||||+|||
T Consensus 140 ~~~-----~~~lV~E~~~gg~L~~~l~~~-----------~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NIL 200 (410)
T 3v8s_A 140 DDR-----YLYMVMEYMPGGDLVNLMSNY-----------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNML 200 (410)
T ss_dssp CSS-----EEEEEECCCTTEEHHHHHHHC-----------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEE
T ss_pred ECC-----EEEEEEeCCCCCcHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHee
Confidence 766 899999999999999998532 4789999999999999999999998 999999999999
Q ss_pred cCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCC----cCccccchhhHHHHHHHHHhcCCCCc
Q 041249 418 LDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSE----VSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 418 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
++.++++||+|||+++....... .......||+.|+|||++.... ++.++|||||||++|||++|+.||..
T Consensus 201 l~~~g~ikL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 201 LDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp ECTTSCEEECCCTTCEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ECCCCCEEEeccceeEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 99999999999999987755431 1223457999999999987654 88999999999999999999999973
No 81
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.1e-35 Score=313.27 Aligned_cols=253 Identities=17% Similarity=0.170 Sum_probs=202.0
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccch------hhHHHHHHHHHHhcCCCCccceeeeeeccCCCCC
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR------ASRSFIAECRALRSIRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 343 (789)
+.|...+.||+|+||.||+|....+++.||+|+++..... ....+.+|++++++++||||+++++++....
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 87 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--- 87 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 5688899999999999999999989999999998654322 3567999999999999999999999987765
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC-
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM- 422 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~- 422 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++
T Consensus 88 --~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~ 152 (326)
T 2y0a_A 88 --DVILILELVAGGELFDFLAEK----------ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNV 152 (326)
T ss_dssp --EEEEEEECCCSCBHHHHHTTS----------SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSS
T ss_pred --EEEEEEEcCCCCCHHHHHHhc----------CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCC
Confidence 899999999999999999643 56899999999999999999999998 99999999999999887
Q ss_pred ---ceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHH
Q 041249 423 ---VSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN 499 (789)
Q Consensus 423 ---~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~ 499 (789)
.+||+|||+++....... .....||+.|+|||.+....++.++|||||||++|||++|+.||..... .....
T Consensus 153 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~ 227 (326)
T 2y0a_A 153 PKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLA 227 (326)
T ss_dssp SSCCEEECCCTTCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHH
T ss_pred CCCCEEEEECCCCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHHH
Confidence 899999999988754432 2235699999999999988999999999999999999999999963211 01111
Q ss_pred HHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 500 FARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 500 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
.+.... .... ......+...+.+++..|++.++..|++...+..++
T Consensus 228 ~~~~~~---------~~~~------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 273 (326)
T 2y0a_A 228 NVSAVN---------YEFE------------------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273 (326)
T ss_dssp HHHHTC---------CCCC------------------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred HHHhcC---------CCcC------------------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 111000 0000 000012234456788899999999999998775543
No 82
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=7.1e-35 Score=305.41 Aligned_cols=254 Identities=20% Similarity=0.244 Sum_probs=204.9
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
++|...+.||+|+||.||+|....+++.||||++.... ....+.+.+|+++++.++||||+++++++.... ..+
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 81 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-----IQY 81 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EEE
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC-----EEE
Confidence 57888999999999999999999899999999997543 334578999999999999999999999987765 789
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCc
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGD 428 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 428 (789)
+|+||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~d 148 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPD----------IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 148 (276)
T ss_dssp EEEECCTTEEGGGGSBTT----------TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECC
T ss_pred EEEEecCCCcHHHHHhhc----------cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEee
Confidence 999999999999998543 46899999999999999999999998 99999999999999999999999
Q ss_pred ccccccCCCCCCccceeeecccccccCcccCCCCCc-CccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCC
Q 041249 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV-STNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPD 507 (789)
Q Consensus 429 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 507 (789)
||.+................|+..|+|||.+....+ +.++||||||+++|||++|+.||.........+..|.......
T Consensus 149 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 228 (276)
T 2yex_A 149 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228 (276)
T ss_dssp CTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTS
T ss_pred CCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccccc
Confidence 999987654432222334568999999999987765 7899999999999999999999975443333333332211000
Q ss_pred chhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 508 HVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 508 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
. ........+.+++..|.+.++..|++...+..+
T Consensus 229 ------~------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 229 ------N------------------------PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ------T------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ------C------------------------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0 001223345678889999999999998877543
No 83
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-34 Score=317.69 Aligned_cols=254 Identities=18% Similarity=0.191 Sum_probs=205.2
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.++|...+.||+|+||.||+|....+++.||+|++..........+.+|++++++++||||+++++++.... ..+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-----~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY-----EMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS-----EEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC-----EEE
Confidence 367899999999999999999999899999999997665556678999999999999999999999997765 899
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC--CCceee
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE--EMVSHV 426 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl 426 (789)
+||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++. .+.+||
T Consensus 125 lv~E~~~gg~L~~~l~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL 192 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAE---------DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKI 192 (387)
T ss_dssp EEEECCCCCBHHHHTTCT---------TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEE
T ss_pred EEEEcCCCCcHHHHHHhh---------cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEE
Confidence 999999999999998643 346899999999999999999999998 999999999999974 478999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH-hC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM-AL 505 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~-~~ 505 (789)
+|||+++....... .....||..|+|||++....++.++|||||||++|||++|+.||..... ......+.. .+
T Consensus 193 ~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~~ 267 (387)
T 1kob_A 193 IDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVKRCDW 267 (387)
T ss_dssp CCCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHHCCC
T ss_pred EecccceecCCCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCC
Confidence 99999998765432 2345699999999999999999999999999999999999999973211 111111111 00
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
. .++.. .......+.+++..|++.++..|++...+..++
T Consensus 268 ~------~~~~~----------------------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 268 E------FDEDA----------------------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp C------CCSST----------------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred C------CCccc----------------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 0 00000 012234566888999999999999998775543
No 84
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.9e-35 Score=320.53 Aligned_cols=201 Identities=24% Similarity=0.308 Sum_probs=176.2
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~ 344 (789)
.++|...+.||+|+||+||+|+...+++.||+|+++... ......+..|..++.++ +||||+++++++....
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 126 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 126 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC----
Confidence 467889999999999999999999999999999997542 23345688899999887 8999999999998766
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+.+|+|..++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++
T Consensus 127 -~~~lV~E~~~gg~L~~~l~~~----------~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~i 192 (396)
T 4dc2_A 127 -RLFFVIEYVNGGDLMFHMQRQ----------RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHI 192 (396)
T ss_dssp -EEEEEEECCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCE
T ss_pred -EEEEEEEcCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCE
Confidence 899999999999999998643 46899999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||+.
T Consensus 193 kL~DFGla~~~~~~~~--~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 193 KLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp EECCCTTCBCCCCTTC--CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred EEeecceeeecccCCC--ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 9999999986433221 23346799999999999999999999999999999999999999964
No 85
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-35 Score=312.00 Aligned_cols=197 Identities=25% Similarity=0.353 Sum_probs=176.6
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
++|...+.||+|+||.||+|+...+++.||+|+++... ......+.+|+.+++.++||||+++++++.... .
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~-----~ 80 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ-----Q 80 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS-----E
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC-----E
Confidence 57888999999999999999999899999999996542 234567889999999999999999999998765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++++||
T Consensus 81 ~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL 147 (318)
T 1fot_A 81 IFMIMDYIEGGELFSLLRKS----------QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKI 147 (318)
T ss_dssp EEEEECCCCSCBHHHHHHHT----------SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEE
Confidence 99999999999999999643 46899999999999999999999988 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 148 ~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 205 (318)
T 1fot_A 148 TDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205 (318)
T ss_dssp CCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred eecCcceecCCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 999999876542 2235699999999999999999999999999999999999999973
No 86
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.4e-35 Score=314.59 Aligned_cols=248 Identities=19% Similarity=0.270 Sum_probs=199.5
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
++|...+.||+|+||.||+|.+..+++.||||++... .......+.+|+++++.++||||+++++++.... .
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-----~ 83 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT-----D 83 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----E
Confidence 5788899999999999999999889999999998643 2233467899999999999999999999998765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+ +|++.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||++++++.+||
T Consensus 84 ~~lv~E~~-~g~l~~~l~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl 149 (336)
T 3h4j_B 84 IVMVIEYA-GGELFDYIVEK----------KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKI 149 (336)
T ss_dssp EEEEECCC-CEEHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEE
T ss_pred EEEEEECC-CCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEE
Confidence 99999999 68999888543 46899999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCc-CccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV-STNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
+|||++........ .....||+.|+|||.+.+..+ ++++|||||||++|||++|+.||+......
T Consensus 150 ~DFG~s~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~----------- 215 (336)
T 3h4j_B 150 ADFGLSNIMTDGNF---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN----------- 215 (336)
T ss_dssp CCSSCTBTTTTSBT---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT-----------
T ss_pred EEeccceeccCCcc---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH-----------
Confidence 99999987655432 223569999999999988776 789999999999999999999997432110
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
-...+...... ........+.+++..|.+.++..|++..+...++
T Consensus 216 --~~~~i~~~~~~--------------------~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 216 --LFKKVNSCVYV--------------------MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp --CBCCCCSSCCC--------------------CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred --HHHHHHcCCCC--------------------CcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 00000000000 0001223455788899999999999998876544
No 87
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=307.43 Aligned_cols=253 Identities=18% Similarity=0.229 Sum_probs=194.6
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--------------------------hhhHHHHHHHHHHh
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--------------------------RASRSFIAECRALR 322 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 322 (789)
.++|...+.||+|+||.||+|....+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 3678889999999999999999998999999999865421 12356889999999
Q ss_pred cCCCCccceeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCC
Q 041249 323 SIRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDC 402 (789)
Q Consensus 323 ~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~ 402 (789)
+++||||+++++++.... ....++||||+.+|+|.+++. ...+++.++..++.|++.||+|||+.+
T Consensus 92 ~l~h~~iv~~~~~~~~~~---~~~~~lv~e~~~~~~l~~~~~-----------~~~~~~~~~~~~~~qi~~~l~~lH~~~ 157 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPN---EDHLYMVFELVNQGPVMEVPT-----------LKPLSEDQARFYFQDLIKGIEYLHYQK 157 (298)
T ss_dssp TCCCTTBCCEEEEEECSS---SSEEEEEEECCTTCBSCCSSC-----------SSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hCCCCCCCeEEEEEEcCC---CCEEEEEEecCCCCcHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999999987532 237899999999999988653 246899999999999999999999998
Q ss_pred CCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCC---cCccccchhhHHHHHH
Q 041249 403 QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSE---VSTNGDVYSYGILMLE 479 (789)
Q Consensus 403 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~k~DV~sfGvvl~e 479 (789)
|+||||||+||+++.++.+||+|||+++....... ......||..|+|||.+.... ++.++|||||||++||
T Consensus 158 ---ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~ 232 (298)
T 2zv2_A 158 ---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYC 232 (298)
T ss_dssp ---EECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHH
T ss_pred ---eeccCCCHHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHH
Confidence 99999999999999999999999999987654432 123456999999999987765 4789999999999999
Q ss_pred HHHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeE
Q 041249 480 LIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTI 559 (789)
Q Consensus 480 lltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~ 559 (789)
|++|+.||... ....+......... .. +. ...+...+.+++..|++.++
T Consensus 233 l~~g~~pf~~~-----~~~~~~~~~~~~~~-~~--~~-----------------------~~~~~~~l~~li~~~l~~dp 281 (298)
T 2zv2_A 233 FVFGQCPFMDE-----RIMCLHSKIKSQAL-EF--PD-----------------------QPDIAEDLKDLITRMLDKNP 281 (298)
T ss_dssp HHHSSCSSCCS-----SHHHHHHHHHHCCC-CC--CS-----------------------SSCCCHHHHHHHHHHTCSCT
T ss_pred HHHCCCCCCCc-----cHHHHHHHHhcccC-CC--CC-----------------------ccccCHHHHHHHHHHhhcCh
Confidence 99999999732 11111111100000 00 00 00123345678889999999
Q ss_pred eccCcccccccc
Q 041249 560 LDLESLKLAGSI 571 (789)
Q Consensus 560 l~l~s~~~~~~~ 571 (789)
.+|++..++..+
T Consensus 282 ~~R~s~~e~l~h 293 (298)
T 2zv2_A 282 ESRIVVPEIKLH 293 (298)
T ss_dssp TTSCCHHHHTTC
T ss_pred hhCCCHHHHhcC
Confidence 999998876443
No 88
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=324.96 Aligned_cols=264 Identities=20% Similarity=0.301 Sum_probs=203.4
Q ss_pred hcCCCCCCcccccCCccEEEEEEc-----CCceEEEEEEeccc-cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLD-----EGRTTVTVKVFNLH-HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQ 342 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 342 (789)
.++|...+.||+|+||+||+|.+. .+++.||||+++.. .......+..|+.++++++||||+++++++....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-- 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--
Confidence 467888999999999999999954 45778999999654 3344567899999999999999999999987655
Q ss_pred CCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC
Q 041249 343 GNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM 422 (789)
Q Consensus 343 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~ 422 (789)
..++||||+.+|+|.+++.... ........+++.++..++.|++.||+|||+.+ |+||||||+|||++.++
T Consensus 148 ---~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 148 ---PRFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPG 218 (367)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHHS---CCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSS
T ss_pred ---CCEEEEEeCCCCCHHHHHHhhc---cccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCC
Confidence 6799999999999999997541 11223456899999999999999999999998 99999999999999544
Q ss_pred ---ceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHH
Q 041249 423 ---VSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLH 498 (789)
Q Consensus 423 ---~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~ 498 (789)
.+||+|||+++...............||..|+|||.+.+..++.++|||||||++|||++ |+.||..... ..+.
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~ 296 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVL 296 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHH
T ss_pred CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHH
Confidence 599999999986543332222334557899999999988899999999999999999998 9999973211 1111
Q ss_pred HHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccccc
Q 041249 499 NFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPHI 575 (789)
Q Consensus 499 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~l 575 (789)
..+...... .....+...+.+++..|++.++.+||+...+...+..+
T Consensus 297 ~~i~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 297 EFVTSGGRM------------------------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp HHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHcCCCC------------------------------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 111111000 00112334566888999999999999998886555443
No 89
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.4e-35 Score=314.05 Aligned_cols=274 Identities=24% Similarity=0.325 Sum_probs=201.6
Q ss_pred hcCCCCCCcccccCCccEEEEEE----cCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVL----DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
.++|...+.||+|+||+||+|.+ ..+++.||||++........+.+.+|++++++++||||+++++++...+ .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---R 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH---H
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---C
Confidence 35788889999999999999994 5578999999998766666788999999999999999999999985432 1
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
...++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~ 153 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKH---------KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 153 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHC---------GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEE
T ss_pred CceEEEEEeCCCCCHHHHHHhc---------ccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeE
Confidence 2479999999999999999643 245899999999999999999999988 9999999999999999999
Q ss_pred eeCcccccccCCCCCCc-cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 425 HVGDFGLARFLPPTHVQ-TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++|..|+.... ..+.+.
T Consensus 154 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~------~~~~~~ 227 (295)
T 3ugc_A 154 KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP------AEFMRM 227 (295)
T ss_dssp EECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHH------HHHHHH
T ss_pred EEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCCh------HHHHhh
Confidence 99999999987654422 22223457778999999998899999999999999999999999986321 111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
........... ..... ......+......+...+.+++..|++.++.+||+..++...+.
T Consensus 228 ~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~ 287 (295)
T 3ugc_A 228 IGNDKQGQMIV---------FHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287 (295)
T ss_dssp HCTTCCTHHHH---------HHHHH-HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred hcCccccchhH---------HHHHH-HHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 11000000000 00000 00000001112245566778999999999999999988755443
No 90
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=9.3e-36 Score=325.45 Aligned_cols=270 Identities=16% Similarity=0.240 Sum_probs=204.3
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCC-----ceEEEEEEeccccchh-----------hHHHHHHHHHHhcCCCCccce
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEG-----RTTVTVKVFNLHHHRA-----------SRSFIAECRALRSIRHRNLVK 331 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~ 331 (789)
..++|...+.||+|+||+||+|.+..+ ++.||||++....... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 456899999999999999999999754 5789999986543211 123445666778889999999
Q ss_pred eeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCC
Q 041249 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDL 411 (789)
Q Consensus 332 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dl 411 (789)
+++++.... .+....++||||+ +|+|.+++... ...+++.++..|+.|++.||+|||+.+ |+||||
T Consensus 113 ~~~~~~~~~-~~~~~~~lv~e~~-g~~L~~~~~~~---------~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDl 178 (364)
T 3op5_A 113 YWGSGLHDK-NGKSYRFMIMDRF-GSDLQKIYEAN---------AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDI 178 (364)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECE-EEEHHHHHHHT---------TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCC
T ss_pred EEeeeeecc-CCcceEEEEEeCC-CCCHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecC
Confidence 999987642 2223689999999 89999998643 356899999999999999999999998 999999
Q ss_pred CCCceecC--CCCceeeCcccccccCCCCCCc-----cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhc
Q 041249 412 KPSNILLD--EEMVSHVGDFGLARFLPPTHVQ-----TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRK 484 (789)
Q Consensus 412 k~~Nill~--~~~~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~ 484 (789)
||+|||++ .++.+||+|||+++........ .......||..|+|||++.+..++.++|||||||++|||++|+
T Consensus 179 kp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 258 (364)
T 3op5_A 179 KASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH 258 (364)
T ss_dssp CGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999 8899999999999877543311 1123345999999999999999999999999999999999999
Q ss_pred CCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCc
Q 041249 485 KPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLES 564 (789)
Q Consensus 485 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s 564 (789)
.||...... .....+.+......+.+..++.+.. ..+...+.+++..|++.++.+||+
T Consensus 259 ~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~li~~cl~~~p~~RP~ 316 (364)
T 3op5_A 259 LPWEDNLKD-PKYVRDSKIRYRENIASLMDKCFPA---------------------ANAPGEIAKYMETVKLLDYTEKPL 316 (364)
T ss_dssp CTTGGGTTC-HHHHHHHHHHHHHCHHHHHHHHSCT---------------------TCCCHHHHHHHHHHHTCCTTCCCC
T ss_pred CCccccccC-HHHHHHHHHHhhhhHHHHHHHhccc---------------------ccCHHHHHHHHHHHhcCCCCCCCC
Confidence 999843222 2233333333222233333322210 123456778888999999999999
Q ss_pred ccccccccc
Q 041249 565 LKLAGSILP 573 (789)
Q Consensus 565 ~~~~~~~l~ 573 (789)
.......+.
T Consensus 317 ~~~l~~~l~ 325 (364)
T 3op5_A 317 YENLRDILL 325 (364)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887754443
No 91
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=8.7e-35 Score=324.58 Aligned_cols=255 Identities=18% Similarity=0.211 Sum_probs=202.0
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||+||+|....+++.||+|++.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~ 84 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG-----H 84 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS-----E
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC-----E
Confidence 467889999999999999999999999999999997553 234567899999999999999999999998765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecC---CCCc
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD---EEMV 423 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~---~~~~ 423 (789)
.++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.
T Consensus 85 ~~lv~E~~~gg~L~~~i~~~----------~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~ 151 (444)
T 3soa_A 85 HYLIFDLVTGGELFEDIVAR----------EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAA 151 (444)
T ss_dssp EEEEECCCBCCBHHHHHHHC----------SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCC
T ss_pred EEEEEEeCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCc
Confidence 99999999999999988643 56899999999999999999999998 99999999999998 4678
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
+||+|||++........ ......||+.|+|||.+....++.++|||||||++|+|++|+.||.... ...+...+..
T Consensus 152 vkL~DFG~a~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--~~~~~~~i~~ 227 (444)
T 3soa_A 152 VKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED--QHRLYQQIKA 227 (444)
T ss_dssp EEECCCSSCBCCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHH
T ss_pred EEEccCceeEEecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHh
Confidence 99999999987765432 1234569999999999999899999999999999999999999996321 1111111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
... +...+ ....+...+.+++..|.+.++.+|++..++..++
T Consensus 228 ~~~----~~~~~-----------------------~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 228 GAY----DFPSP-----------------------EWDTVTPEAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp TCC----CCCTT-----------------------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred CCC----CCCcc-----------------------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 100 00000 0012234456788899999999999998876544
No 92
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.9e-35 Score=317.87 Aligned_cols=256 Identities=18% Similarity=0.206 Sum_probs=201.1
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-----chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-----HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
+.|...+.||+|+||+||+|....+++.||||++.... ....+.+.+|+++++.++||||+++++++....
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---- 99 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG---- 99 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC----
Confidence 56888999999999999999999899999999986432 123577999999999999999999999988765
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc-
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV- 423 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~- 423 (789)
..++||||+.+|+|.+++... ......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.
T Consensus 100 -~~~lv~e~~~g~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~ 169 (351)
T 3c0i_A 100 -MLYMVFEFMDGADLCFEIVKR------ADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENS 169 (351)
T ss_dssp -EEEEEEECCSSCBHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTT
T ss_pred -EEEEEEeCCCCCCHHHHHHHh------cccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCC
Confidence 899999999999998887532 112345899999999999999999999998 999999999999986654
Q ss_pred --eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHH
Q 041249 424 --SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501 (789)
Q Consensus 424 --~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~ 501 (789)
+||+|||+++....... ......||+.|+|||.+....++.++|||||||++|||++|+.||....+ ..+....
T Consensus 170 ~~vkl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~i~ 245 (351)
T 3c0i_A 170 APVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGII 245 (351)
T ss_dssp CCEEECCCTTCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHHHHHH
T ss_pred CcEEEecCcceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHHHHHH
Confidence 99999999988765432 12345699999999999998999999999999999999999999974211 0011111
Q ss_pred HHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 502 RMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 502 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
+..... .. .........+.+++..|++.++..|++...+..+
T Consensus 246 ~~~~~~------------~~----------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 246 KGKYKM------------NP----------------RQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HTCCCC------------CH----------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCCCC------------Cc----------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 100000 00 0001223456678889999999999998877543
No 93
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6e-35 Score=316.82 Aligned_cols=253 Identities=20% Similarity=0.217 Sum_probs=186.9
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
..+.|...+.||+|+||.||+|.+..+++.||||+++... ..+.+.+|++++++++||||+++++++.... ..
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 123 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT-----EI 123 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSS-----EE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCC-----eE
Confidence 4578999999999999999999999889999999987443 3467889999999999999999999997765 89
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC---CCce
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE---EMVS 424 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~---~~~~ 424 (789)
++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++. ++.+
T Consensus 124 ~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~ 190 (349)
T 2w4o_A 124 SLVLELVTGGELFDRIVEK----------GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPL 190 (349)
T ss_dssp EEEECCCCSCBHHHHHTTC----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCE
Confidence 9999999999999998643 45899999999999999999999998 999999999999975 8899
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHh
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 504 (789)
||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........+.......
T Consensus 191 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~ 267 (349)
T 2w4o_A 191 KIADFGLSKIVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE 267 (349)
T ss_dssp EECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC
T ss_pred EEccCccccccCccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC
Confidence 999999998765432 12345689999999999998999999999999999999999999964322111111111100
Q ss_pred CCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 505 LPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 505 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
. ....+. ..+....+.+++..|.+.++..|++......+
T Consensus 268 ~-----~~~~~~-----------------------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 268 Y-----YFISPW-----------------------WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp C-----CCCTTT-----------------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred C-----ccCCch-----------------------hhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000000 01223345688889999999999999877543
No 94
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.9e-35 Score=318.08 Aligned_cols=257 Identities=22% Similarity=0.329 Sum_probs=196.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceE----EEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTT----VTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 343 (789)
.++|...+.||+|+||+||+|.+..+++. ||+|.++... ....+.+.+|++++++++||||++++++|...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 89 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 89 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS----
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC----
Confidence 35788899999999999999998766654 5888775432 34457899999999999999999999999753
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV 423 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~ 423 (789)
..++|+||+.+|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+||+++.++.
T Consensus 90 --~~~~v~e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~ 155 (327)
T 3poz_A 90 --TVQLITQLMPFGCLLDYVREH---------KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp --SEEEEEECCTTCBHHHHHHHS---------TTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTE
T ss_pred --CeEEEEEecCCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCC
Confidence 478999999999999998643 356899999999999999999999998 999999999999999999
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHH
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFAR 502 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 502 (789)
+||+|||+++...............+|..|+|||.+.+..++.++|||||||++|||++ |+.||+.... ..+...+.
T Consensus 156 ~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~ 233 (327)
T 3poz_A 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILE 233 (327)
T ss_dssp EEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHH
T ss_pred EEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHHHH
Confidence 99999999998766554444445567889999999999999999999999999999999 9999974321 12222222
Q ss_pred HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccccc
Q 041249 503 MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPHI 575 (789)
Q Consensus 503 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~l 575 (789)
..... .....+...+.+++..|++.++.+||++..+...+..+
T Consensus 234 ~~~~~------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 234 KGERL------------------------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp TTCCC------------------------------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred cCCCC------------------------------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 11100 00112334566888899999999999998875544433
No 95
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.7e-35 Score=322.61 Aligned_cols=213 Identities=21% Similarity=0.276 Sum_probs=184.9
Q ss_pred cccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcCCCCccceeeee
Q 041249 259 NLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSIRHRNLVKVFTA 335 (789)
Q Consensus 259 ~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 335 (789)
.+.+.+.....++|...+.||+|+||+||+|+...+++.||+|+++.. .......+.+|++++..++||||++++++
T Consensus 50 ~~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~ 129 (412)
T 2vd5_A 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA 129 (412)
T ss_dssp HHHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred hhhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence 345667777889999999999999999999999989999999999643 22234568899999999999999999999
Q ss_pred eccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCc
Q 041249 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSN 415 (789)
Q Consensus 336 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~N 415 (789)
+.... ..++||||+.+|+|.+++... +..+++..+..++.|++.||+|||+.+ ||||||||+|
T Consensus 130 ~~~~~-----~~~lVmE~~~gg~L~~~l~~~---------~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~N 192 (412)
T 2vd5_A 130 FQDEN-----YLYLVMEYYVGGDLLTLLSKF---------GERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDN 192 (412)
T ss_dssp EECSS-----EEEEEECCCCSCBHHHHHHHH---------SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGG
T ss_pred EeeCC-----EEEEEEcCCCCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHH
Confidence 98766 899999999999999999642 246899999999999999999999998 9999999999
Q ss_pred eecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCC-------CCCcCccccchhhHHHHHHHHHhcCCCC
Q 041249 416 ILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL-------GSEVSTNGDVYSYGILMLELIIRKKPSD 488 (789)
Q Consensus 416 ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~k~DV~sfGvvl~elltG~~P~~ 488 (789)
||++.++++||+|||+++........ ......||+.|+|||++. ...++.++|||||||++|||++|+.||.
T Consensus 193 ILld~~g~vkL~DFGla~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~ 271 (412)
T 2vd5_A 193 ILLDRCGHIRLADFGSCLKLRADGTV-RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271 (412)
T ss_dssp EEECTTSCEEECCCTTCEECCTTSCE-ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred eeecCCCCEEEeechhheeccCCCcc-ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCC
Confidence 99999999999999999887654321 122357999999999987 4578999999999999999999999997
Q ss_pred c
Q 041249 489 I 489 (789)
Q Consensus 489 ~ 489 (789)
.
T Consensus 272 ~ 272 (412)
T 2vd5_A 272 A 272 (412)
T ss_dssp C
T ss_pred C
Confidence 3
No 96
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.5e-34 Score=309.65 Aligned_cols=206 Identities=27% Similarity=0.428 Sum_probs=162.8
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc-hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
.++|...+.||+|+||+||+|....+++.||+|+++.... .....+.+|++++++++||||+++++++.... ..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTEN-----KL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT-----EE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC-----eE
Confidence 4689999999999999999999998999999999975533 33567889999999999999999999987655 89
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
++||||+. |+|.+++.... .......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~ 150 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRT----VGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLG 150 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHH----SSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEEC
T ss_pred EEEEEecC-CCHHHHHHhcc----ccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEEC
Confidence 99999999 69998885431 1123356899999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCC-CcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|||.++....... ......||..|+|||.+.+. .++.++|||||||++|||++|+.||..
T Consensus 151 Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 211 (317)
T 2pmi_A 151 DFGLARAFGIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPG 211 (317)
T ss_dssp CCSSCEETTSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cCccceecCCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999987654321 12234689999999998764 589999999999999999999999974
No 97
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.8e-35 Score=314.68 Aligned_cols=258 Identities=19% Similarity=0.257 Sum_probs=202.4
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCCceE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
.++|...+.||+|+||+||+|....+++.||||++..... ...+..|+++++++ +||||+++++++.... ..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-----~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK-----YN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT-----EE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC-----cc
Confidence 4688999999999999999999988999999999865432 34688999999999 9999999999988765 78
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc----
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV---- 423 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~---- 423 (789)
++||||+ +|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.
T Consensus 81 ~lv~e~~-~~~L~~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~ 147 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLC---------DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQ 147 (330)
T ss_dssp EEEEECC-CCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTT
T ss_pred EEEEEeC-CCCHHHHHHHc---------CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCc
Confidence 9999999 89999998643 356899999999999999999999998 999999999999998887
Q ss_pred -eeeCcccccccCCCCCCcc-----ceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccH
Q 041249 424 -SHVGDFGLARFLPPTHVQT-----SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNL 497 (789)
Q Consensus 424 -~kl~Dfgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~ 497 (789)
+||+|||+++......... ......||..|+|||.+.+..++.++|||||||++|||++|+.||.....+ ..
T Consensus 148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~ 225 (330)
T 2izr_A 148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TL 225 (330)
T ss_dssp SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SH
T ss_pred eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cH
Confidence 9999999999765443211 123467999999999999999999999999999999999999999743211 11
Q ss_pred HHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhch-hHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 498 HNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNN-IIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 498 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
....+..... ... .+... ...+. .+.+++..|++.++.+||+...+...+.
T Consensus 226 ~~~~~~i~~~-----------------------~~~-~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 226 KERYQKIGDT-----------------------KRA-TPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HHHHHHHHHH-----------------------HHH-SCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHhh-----------------------hcc-CCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 1111110000 000 00000 01123 6778889999999999999887755443
No 98
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.1e-34 Score=314.40 Aligned_cols=201 Identities=22% Similarity=0.295 Sum_probs=177.4
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~ 344 (789)
.++|...+.||+|+||.||+|....+++.||+|+++.. .......+..|.+++..+ +||+|+++++++....
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~---- 94 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD---- 94 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS----
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC----
Confidence 46899999999999999999999988999999999654 223456788999999988 8999999999998766
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++++
T Consensus 95 -~~~lv~E~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~v 160 (353)
T 2i0e_A 95 -RLYFVMEYVNGGDLMYHIQQV----------GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHI 160 (353)
T ss_dssp -EEEEEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCE
T ss_pred -EEEEEEeCCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcE
Confidence 899999999999999998643 45899999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
||+|||+++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 161 kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 223 (353)
T 2i0e_A 161 KIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223 (353)
T ss_dssp EECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEeCCcccccccCCc--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence 9999999986443221 23345799999999999999999999999999999999999999973
No 99
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=317.08 Aligned_cols=249 Identities=22% Similarity=0.219 Sum_probs=195.3
Q ss_pred CCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEEEeec
Q 041249 274 SANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEF 353 (789)
Q Consensus 274 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 353 (789)
..+.||+|+||.||+|....+++.||+|+++.......+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~lv~E~ 167 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN-----DIVLVMEY 167 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----EEEEEEEC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-----EEEEEEeC
Confidence 3568999999999999999899999999998766566778999999999999999999999998765 89999999
Q ss_pred cCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec--CCCCceeeCcccc
Q 041249 354 MQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL--DEEMVSHVGDFGL 431 (789)
Q Consensus 354 ~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfgl 431 (789)
+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+
T Consensus 168 ~~~~~L~~~l~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~ 235 (373)
T 2x4f_A 168 VDGGELFDRIIDE---------SYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGL 235 (373)
T ss_dssp CTTCEEHHHHHHT---------GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSS
T ss_pred CCCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCC
Confidence 9999999988533 246899999999999999999999998 9999999999999 6778999999999
Q ss_pred cccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCchhh
Q 041249 432 ARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMD 511 (789)
Q Consensus 432 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (789)
++....... .....||+.|+|||++....++.++|||||||++|||++|+.||..... ...+..+....+...
T Consensus 236 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~--- 308 (373)
T 2x4f_A 236 ARRYKPREK---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-AETLNNILACRWDLE--- 308 (373)
T ss_dssp CEECCTTCB---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCCSC---
T ss_pred ceecCCccc---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCCCC---
Confidence 998765442 2234599999999999988999999999999999999999999973211 011111111111100
Q ss_pred hccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 512 IVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 512 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
+ .........+.+++..|.+.++..|++..+...+
T Consensus 309 --~-----------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 309 --D-----------------------EEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp --S-----------------------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --h-----------------------hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 0011223456688899999999999998877543
No 100
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.2e-34 Score=312.04 Aligned_cols=257 Identities=20% Similarity=0.287 Sum_probs=197.7
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCC-------
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDY------- 341 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------- 341 (789)
++|...+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.+...
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 57888999999999999999999899999999997543 3346789999999999999999999999865431
Q ss_pred ---------------------------------------------CCCceEEEEeeccCCCChhhhccCCCCCccccCCC
Q 041249 342 ---------------------------------------------QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAP 376 (789)
Q Consensus 342 ---------------------------------------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 376 (789)
......++||||+.+|+|.+++... ...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-------~~~ 158 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR-------CSL 158 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC-------CSG
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc-------cCc
Confidence 1122479999999999999999765 223
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCcccccccCCCCCCc----------cceee
Q 041249 377 RNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQ----------TSSIG 446 (789)
Q Consensus 377 ~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~----------~~~~~ 446 (789)
...++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++........ .....
T Consensus 159 ~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T 3qd2_B 159 EDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTG 235 (332)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCS
T ss_pred cchhhHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccc
Confidence 44577789999999999999999998 999999999999999999999999999987655321 12233
Q ss_pred ecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHH
Q 041249 447 VKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAI 526 (789)
Q Consensus 447 ~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 526 (789)
..||..|+|||.+.+..++.++|||||||++|||++|..|+... ....... ......
T Consensus 236 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~--------~~~~~~-------- 292 (332)
T 3qd2_B 236 QVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITDV--------RNLKFP-------- 292 (332)
T ss_dssp CC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHH--------HTTCCC--------
T ss_pred cCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHh--------hccCCC--------
Confidence 56999999999999989999999999999999999988775411 1111100 000000
Q ss_pred hhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 527 ISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
.........+.+++..|++.++.+||+..++..
T Consensus 293 -----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 293 -----------LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp -----------HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred -----------cccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 011122334567888999999999999887644
No 101
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.4e-35 Score=314.93 Aligned_cols=256 Identities=23% Similarity=0.315 Sum_probs=199.6
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceE----EEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTT----VTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
++|...+.||+|+||+||+|.+..+++. ||+|.+.... ......+.+|+.++++++||||+++++++...
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 87 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS----- 87 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS-----
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC-----
Confidence 5788889999999999999999767665 7888775432 33346688899999999999999999998532
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++|+||+.+|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 88 -~~~~v~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~ 154 (325)
T 3kex_A 88 -SLQLVTQYLPLGSLLDHVRQH---------RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQV 154 (325)
T ss_dssp -SEEEEEECCTTCBSHHHHHSS---------GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCE
T ss_pred -ccEEEEEeCCCCCHHHHHHHc---------cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeE
Confidence 589999999999999998643 246889999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHH
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 503 (789)
||+|||+++...............|+..|+|||.+....++.++|||||||++|||++ |+.||..... ......+..
T Consensus 155 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~ 232 (325)
T 3kex_A 155 QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLEK 232 (325)
T ss_dssp EECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--THHHHHHHT
T ss_pred EECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH--HHHHHHHHc
Confidence 9999999998876654444455678889999999998899999999999999999999 9999974321 122222221
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPHI 575 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~l 575 (789)
........ .+...+.+++..|++.++.+||+...+...+..+
T Consensus 233 ~~~~~~~~------------------------------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~ 274 (325)
T 3kex_A 233 GERLAQPQ------------------------------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM 274 (325)
T ss_dssp TCBCCCCT------------------------------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCC------------------------------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11110111 1222344678899999999999998876554433
No 102
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.6e-34 Score=312.51 Aligned_cols=200 Identities=25% Similarity=0.313 Sum_probs=176.6
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCCc
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 345 (789)
++|...+.||+|+||.||+|+...+++.||+|+++... ......+..|++++.++ +||||+++++++....
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~----- 83 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----- 83 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC-----
Confidence 57888999999999999999999899999999997542 23356688899999988 8999999999998765
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++++|
T Consensus 84 ~~~lv~e~~~gg~L~~~l~~~----------~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~k 150 (345)
T 3a8x_A 84 RLFFVIEYVNGGDLMFHMQRQ----------RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIK 150 (345)
T ss_dssp EEEEEECCCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEE
Confidence 899999999999999998643 46899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|+|||+++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 151 L~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 151 LTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp ECCGGGCBCSCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred EEeccccccccCCCC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 999999986433221 23345799999999999998999999999999999999999999964
No 103
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-35 Score=318.28 Aligned_cols=272 Identities=23% Similarity=0.332 Sum_probs=207.5
Q ss_pred HHHHHhhcCCCCCCcccccCCccEEEEEEc-----CCceEEEEEEeccccc-hhhHHHHHHHHHHhcCCCCccceeeeee
Q 041249 263 QNLHNATDGFSSANLIGTGSFGSVYKGVLD-----EGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTAC 336 (789)
Q Consensus 263 ~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~ 336 (789)
.++....++|...+.||+|+||.||+|.+. .+++.||||+++.... ...+.+.+|++++++++||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 119 (343)
T 1luf_A 40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 119 (343)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 344556789999999999999999999997 3458999999975533 3457799999999999999999999999
Q ss_pred ccCCCCCCceEEEEeeccCCCChhhhccCCCCCc--------------cccCCCCCCCHHHHHHHHHHHHHHHhhhhcCC
Q 041249 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNRED--------------EVDKAPRNLNLLQRLNIAIDVASALDYLHHDC 402 (789)
Q Consensus 337 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~--------------~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~ 402 (789)
.... ..++||||+.+|+|.+++....... ........+++.++..++.|++.||+|||+.+
T Consensus 120 ~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ 194 (343)
T 1luf_A 120 AVGK-----PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK 194 (343)
T ss_dssp CSSS-----SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCC-----ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 7655 7899999999999999997531100 00111367899999999999999999999998
Q ss_pred CCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH
Q 041249 403 QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII 482 (789)
Q Consensus 403 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt 482 (789)
|+||||||+||+++.++.+||+|||+++...............+|..|+|||.+....++.++||||||+++|||++
T Consensus 195 ---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 271 (343)
T 1luf_A 195 ---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271 (343)
T ss_dssp ---CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred ---eecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHh
Confidence 99999999999999999999999999987654433223334568899999999988889999999999999999999
Q ss_pred -hcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEec
Q 041249 483 -RKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILD 561 (789)
Q Consensus 483 -G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~ 561 (789)
|+.||.... ..+........... .. ...+...+.+++..|++.++.+
T Consensus 272 ~g~~p~~~~~-----~~~~~~~~~~~~~~-----~~----------------------~~~~~~~l~~li~~~l~~~p~~ 319 (343)
T 1luf_A 272 YGLQPYYGMA-----HEEVIYYVRDGNIL-----AC----------------------PENCPLELYNLMRLCWSKLPAD 319 (343)
T ss_dssp TTCCTTTTSC-----HHHHHHHHHTTCCC-----CC----------------------CTTCCHHHHHHHHHHTCSSGGG
T ss_pred cCCCcCCCCC-----hHHHHHHHhCCCcC-----CC----------------------CCCCCHHHHHHHHHHcccCccc
Confidence 999997321 11111111110000 00 0123345668888999999999
Q ss_pred cCccccccccccc
Q 041249 562 LESLKLAGSILPH 574 (789)
Q Consensus 562 l~s~~~~~~~l~~ 574 (789)
||+...+...+..
T Consensus 320 Rps~~~~~~~L~~ 332 (343)
T 1luf_A 320 RPSFCSIHRILQR 332 (343)
T ss_dssp SCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9999877554443
No 104
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.5e-35 Score=336.46 Aligned_cols=261 Identities=23% Similarity=0.345 Sum_probs=209.2
Q ss_pred HHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCC
Q 041249 264 NLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 264 ~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 343 (789)
+.+...++|...+.||+|+||+||+|.+..++..||||+++.... ..+.+.+|++++++++||||++++++|....
T Consensus 214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--- 289 (495)
T 1opk_A 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--- 289 (495)
T ss_dssp CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCC---
Confidence 344556778889999999999999999998899999999975432 3578999999999999999999999997665
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV 423 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~ 423 (789)
..++||||+.+|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.
T Consensus 290 --~~~lv~E~~~~g~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~ 356 (495)
T 1opk_A 290 --PFYIITEFMTYGNLLDYLREC--------NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHL 356 (495)
T ss_dssp --SCEEEEECCTTCBHHHHHHHS--------CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGC
T ss_pred --cEEEEEEccCCCCHHHHHHhc--------CcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCc
Confidence 789999999999999999653 2356899999999999999999999998 999999999999999999
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHH
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFAR 502 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 502 (789)
+||+|||+++....... .......++..|+|||.+....++.++|||||||++|||++ |+.||..... ..+.+.+.
T Consensus 357 ~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--~~~~~~~~ 433 (495)
T 1opk_A 357 VKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLE 433 (495)
T ss_dssp EEECCTTCEECCTTCCE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHH
T ss_pred EEEeecccceeccCCce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH
Confidence 99999999998754331 11223446788999999988899999999999999999999 9999874321 11222221
Q ss_pred HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccccc
Q 041249 503 MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPH 574 (789)
Q Consensus 503 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~ 574 (789)
..... .....|...+.+++..|++.++.+||++..+...+..
T Consensus 434 ~~~~~------------------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~ 475 (495)
T 1opk_A 434 KDYRM------------------------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 475 (495)
T ss_dssp TTCCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred cCCCC------------------------------CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 11100 0111344567788899999999999999887554443
No 105
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.1e-34 Score=314.43 Aligned_cols=197 Identities=24% Similarity=0.314 Sum_probs=176.7
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
++|...+.||+|+||.||+|+...+++.||+|+++... ......+.+|+++++.++||||+++++++.... .
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~ 115 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS-----N 115 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC-----E
Confidence 57888999999999999999999899999999986442 234567889999999999999999999998765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++++||
T Consensus 116 ~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL 182 (350)
T 1rdq_E 116 LYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQV 182 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHH----------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEcCCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEE
Confidence 99999999999999999643 45899999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
+|||+++...... ....||+.|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 183 ~DFg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 240 (350)
T 1rdq_E 183 TDFGFAKRVKGRT-----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240 (350)
T ss_dssp CCCTTCEECSSCB-----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccccceeccCCc-----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC
Confidence 9999998765432 235699999999999998999999999999999999999999973
No 106
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=315.31 Aligned_cols=246 Identities=22% Similarity=0.198 Sum_probs=189.9
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--hhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--RASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 346 (789)
++|...+.||+|+||+||+|.+..+++.||||++..... ........|+..+.++ +||||++++++|.... .
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~-----~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG-----I 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC-----E
Confidence 578889999999999999999998999999999864422 2334455566666555 8999999999998765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+ +|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl 198 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAW---------GASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKL 198 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHH---------CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEE
T ss_pred EEEEEecc-CCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEE
Confidence 99999999 57898888543 346899999999999999999999988 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALP 506 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 506 (789)
+|||++........ .....||+.|+|||++.+ .++.++|||||||++|||++|..|+... ..|...
T Consensus 199 ~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~-------~~~~~~--- 264 (311)
T 3p1a_A 199 GDFGLLVELGTAGA---GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG-------EGWQQL--- 264 (311)
T ss_dssp CCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH-------HHHHHH---
T ss_pred ccceeeeecccCCC---CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc-------cHHHHH---
Confidence 99999987654432 233559999999998765 7999999999999999999997766421 111110
Q ss_pred CchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 507 DHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 507 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
...... ......+...+.+++..|.+.++.+|++..++...
T Consensus 265 ------~~~~~~------------------~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 265 ------RQGYLP------------------PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ------TTTCCC------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ------hccCCC------------------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 000000 00011233456688889999999999998876543
No 107
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.7e-35 Score=314.47 Aligned_cols=207 Identities=23% Similarity=0.377 Sum_probs=169.7
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc---hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
.++|...+.||+|+||.||+|.+..+++.||||+++.... .....+.+|++++++++||||+++++++...... ..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~-~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA-GP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT-EE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC-Cc
Confidence 3678889999999999999999988999999999975532 2345789999999999999999999998654311 12
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~k 156 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTE----------GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVK 156 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEE
T ss_pred ccEEEEecCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEE
Confidence 459999999999999998643 46899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCc-cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 426 VGDFGLARFLPPTHVQ-TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|+|||+++........ .......||..|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 157 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~ 221 (311)
T 3ork_A 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221 (311)
T ss_dssp ECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred EeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999877654322 223345689999999999988999999999999999999999999963
No 108
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.2e-34 Score=302.39 Aligned_cols=251 Identities=22% Similarity=0.344 Sum_probs=197.6
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchh-------hHHHHHHHHHHhcCCCCccceeeeeeccCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRA-------SRSFIAECRALRSIRHRNLVKVFTACSGVDY 341 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 341 (789)
.++|...+.||+|+||+||+|.+..+++.||+|++....... .+.+.+|++++++++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 468888999999999999999999899999999986543221 167899999999999999999999986533
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE 421 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~ 421 (789)
++||||+.+|+|.+++... ...+++..+..++.|++.||+|||+.+ ++++||||||+||+++.+
T Consensus 97 ------~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~ 160 (287)
T 4f0f_A 97 ------RMVMEFVPCGDLYHRLLDK---------AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSL 160 (287)
T ss_dssp ------EEEEECCTTCBHHHHHHCT---------TSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCC
T ss_pred ------eEEEEecCCCCHHHHHhcc---------cCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEecc
Confidence 7999999999999888643 356899999999999999999999874 459999999999999877
Q ss_pred Cc-----eeeCcccccccCCCCCCccceeeecccccccCcccCC--CCCcCccccchhhHHHHHHHHHhcCCCCccccCC
Q 041249 422 MV-----SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL--GSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494 (789)
Q Consensus 422 ~~-----~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~ 494 (789)
+. +||+|||+++..... .....||..|+|||.+. ...+++++|||||||++|||++|+.||.......
T Consensus 161 ~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 235 (287)
T 4f0f_A 161 DENAPVCAKVADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235 (287)
T ss_dssp CTTCSCCEEECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH
T ss_pred CCCCceeEEeCCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH
Confidence 76 999999999854432 23456899999999984 4568999999999999999999999997543322
Q ss_pred ccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 495 MNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
............ .+.+ ...+...+.+++..|++.++.+||+...+..
T Consensus 236 ~~~~~~~~~~~~-------~~~~----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 236 IKFINMIREEGL-------RPTI----------------------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp HHHHHHHHHSCC-------CCCC----------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhccCC-------CCCC----------------------CcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 222222211110 0111 1123345668888999999999999887643
No 109
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.1e-34 Score=307.14 Aligned_cols=250 Identities=20% Similarity=0.206 Sum_probs=179.9
Q ss_pred CCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCC-CCccceeeeeeccCCCCCCceEEEEeec
Q 041249 275 ANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR-HRNLVKVFTACSGVDYQGNDFKALVYEF 353 (789)
Q Consensus 275 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv~e~ 353 (789)
.+.||+|+||+||+|.+..+++.||||++... ....+.+|++++..+. ||||+++++++.... ..++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-----~~~lv~e~ 87 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQL-----HTFLVMEL 87 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----EEEEEECC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----EEEEEEEc
Confidence 57899999999999999989999999998533 3467788999999996 999999999998765 88999999
Q ss_pred cCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC---ceeeCccc
Q 041249 354 MQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM---VSHVGDFG 430 (789)
Q Consensus 354 ~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg 430 (789)
+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||
T Consensus 88 ~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 154 (325)
T 3kn6_A 88 LNGGELFERIKKK----------KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFG 154 (325)
T ss_dssp CCSCBHHHHHHHC----------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCT
T ss_pred cCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccc
Confidence 9999999999643 56899999999999999999999998 99999999999997665 89999999
Q ss_pred ccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccC--CccHHHHHHHhCCCc
Q 041249 431 LARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG--DMNLHNFARMALPDH 508 (789)
Q Consensus 431 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~--~~~~~~~~~~~~~~~ 508 (789)
+++........ .....||..|+|||.+....++.++|||||||++|||++|+.||...... .....+........
T Consensus 155 ~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~- 231 (325)
T 3kn6_A 155 FARLKPPDNQP--LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG- 231 (325)
T ss_dssp TCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTT-
T ss_pred cceecCCCCCc--ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcC-
Confidence 99876554321 23356899999999999999999999999999999999999999753221 11222222211111
Q ss_pred hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 509 VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 509 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
..... ..........+.+++..|.+.++.+|++...+..+
T Consensus 232 -------~~~~~----------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 232 -------DFSFE----------------GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp -------CCCCC----------------SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred -------CCCCC----------------cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 11000 00011234456688889999999999999887544
No 110
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.1e-34 Score=327.93 Aligned_cols=204 Identities=25% Similarity=0.386 Sum_probs=180.6
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
..++|...+.||+|+||.||+|....+++.||+|++... .......+.+|++++++++||||+++++++....
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~---- 257 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD---- 257 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC----
Confidence 356789999999999999999999989999999999643 2333566889999999999999999999998765
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+.+|+|.+++... ....+++..+..++.||+.||+|||+.+ ||||||||+|||++.++++
T Consensus 258 -~l~lVmEy~~gg~L~~~l~~~--------~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~v 325 (576)
T 2acx_A 258 -ALCLVLTLMNGGDLKFHIYHM--------GQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHI 325 (576)
T ss_dssp -EEEEEECCCCSCBHHHHHHSS--------SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCE
T ss_pred -EEEEEEEcCCCCcHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCe
Confidence 899999999999999998654 2345899999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCcc
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIM 490 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~ 490 (789)
||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 326 KL~DFGla~~~~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~ 388 (576)
T 2acx_A 326 RISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388 (576)
T ss_dssp EECCCTTCEECCTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred EEEecccceecccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 9999999988765432 23457999999999999989999999999999999999999999753
No 111
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.9e-34 Score=314.60 Aligned_cols=213 Identities=26% Similarity=0.330 Sum_probs=186.2
Q ss_pred ccccccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCC-----CCc
Q 041249 254 INSLLNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR-----HRN 328 (789)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~n 328 (789)
.+....+++.+.....++|...+.||+|+||+||+|.+..+++.||||+++.. ....+.+..|+++++.+. |||
T Consensus 19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~ 97 (360)
T 3llt_A 19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNN 97 (360)
T ss_dssp -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCC
Confidence 34567788888888889999999999999999999999889999999998643 234556788999999986 999
Q ss_pred cceeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCcee
Q 041249 329 LVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTH 408 (789)
Q Consensus 329 iv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH 408 (789)
|+++++++...+ ..++||||+ +++|.+++... ....+++.++..++.|++.||+|||+.+ |||
T Consensus 98 iv~~~~~~~~~~-----~~~lv~e~~-~~~L~~~~~~~--------~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH 160 (360)
T 3llt_A 98 IVKYHGKFMYYD-----HMCLIFEPL-GPSLYEIITRN--------NYNGFHIEDIKLYCIEILKALNYLRKMS---LTH 160 (360)
T ss_dssp BCCEEEEEEETT-----EEEEEECCC-CCBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EEC
T ss_pred eecccceeeECC-----eeEEEEcCC-CCCHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eee
Confidence 999999998766 899999999 89999999654 2345899999999999999999999998 999
Q ss_pred cCCCCCceecCC-------------------------CCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCC
Q 041249 409 CDLKPSNILLDE-------------------------EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSE 463 (789)
Q Consensus 409 ~dlk~~Nill~~-------------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 463 (789)
|||||+|||++. ++.+||+|||+++...... ....||..|+|||++.+..
T Consensus 161 rDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~ 235 (360)
T 3llt_A 161 TDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLG 235 (360)
T ss_dssp SCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCC
T ss_pred CCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCC
Confidence 999999999976 7899999999998755432 2356899999999999999
Q ss_pred cCccccchhhHHHHHHHHHhcCCCCc
Q 041249 464 VSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 464 ~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
++.++|||||||++|||++|+.||..
T Consensus 236 ~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 236 WDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCCccchHHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999974
No 112
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=310.52 Aligned_cols=278 Identities=18% Similarity=0.221 Sum_probs=209.0
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
+.|...+.||+|+||+||+|.+..+++.||||+++... ....+.+.+|++++++++||||+++++++.... ....+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCC---CceEE
Confidence 56888899999999999999999889999999997543 334567889999999999999999999986543 23679
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec----CCCCce
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL----DEEMVS 424 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill----~~~~~~ 424 (789)
+||||+.+|+|.+++... .....+++.++..++.|++.||+|||+.+ |+||||||+||++ +.++.+
T Consensus 86 lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~ 155 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEP-------SNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVY 155 (319)
T ss_dssp EEEECCTTCBHHHHHHSG-------GGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEE
T ss_pred EEEeCCCCCCHHHHHHHh-------ccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceE
Confidence 999999999999999754 12234899999999999999999999998 9999999999999 888899
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCC--------CCCcCccccchhhHHHHHHHHHhcCCCCccccCCcc
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL--------GSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMN 496 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~ 496 (789)
||+|||+++....... .....||..|+|||.+. ...++.++|||||||++|||++|+.||.........
T Consensus 156 kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 232 (319)
T 4euu_A 156 KLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232 (319)
T ss_dssp EECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC
T ss_pred EEccCCCceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh
Confidence 9999999998765442 22356899999999875 567899999999999999999999999754322221
Q ss_pred --HHHHHHHhCCCchhh-h---ccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 497 --LHNFARMALPDHVMD-I---VDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 497 --~~~~~~~~~~~~~~~-~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
...-+....+..... + ....+.... ...............+.++...|.+.+|..|++..+...
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~ 302 (319)
T 4euu_A 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSG----------DMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302 (319)
T ss_dssp HHHHHHHHHHCCTTCCEEEECSTTCCEEEES----------SCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred HHHHHHHhcCCCcccchhhhcccCCccccCc----------cCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhh
Confidence 111122222221111 1 110110000 000001122345566778899999999999999988755
Q ss_pred ccc
Q 041249 571 ILP 573 (789)
Q Consensus 571 ~l~ 573 (789)
.+.
T Consensus 303 h~~ 305 (319)
T 4euu_A 303 ETS 305 (319)
T ss_dssp HHH
T ss_pred ccH
Confidence 543
No 113
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6.9e-33 Score=311.05 Aligned_cols=150 Identities=23% Similarity=0.253 Sum_probs=117.3
Q ss_pred CEEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCc
Q 041249 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQ 80 (789)
Q Consensus 1 ~l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 80 (789)
+|||++|++++ +| +++.+++|++|++++|+|++. | ++.+++|++|+|++|+|++. | ++.+++|++|+|++|+
T Consensus 46 ~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~ 117 (457)
T 3bz5_A 46 SLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNK 117 (457)
T ss_dssp EEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSC
T ss_pred EEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCc
Confidence 48999999996 46 799999999999999999964 5 89999999999999999964 4 8999999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCCCCCcCCccccCCcccccccccCCCC---------CccceeecCCcccCCCchhhhc
Q 041249 81 FRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVF---------QGLTILDLSRNKLSGEIPEFLV 151 (789)
Q Consensus 81 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~---------~~l~~l~ls~N~l~~~~p~~~~ 151 (789)
+++ +| ++.+++|++|++++|++++ +| ++.+++|++|++++|+. +.|+.|++++|++++ +| +.
T Consensus 118 l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l~--l~ 188 (457)
T 3bz5_A 118 LTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-LD--VS 188 (457)
T ss_dssp CSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-CC--CT
T ss_pred CCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-ec--cc
Confidence 995 65 8999999999999999996 43 78888888888877732 224445555555543 22 44
Q ss_pred CcccccEEecccCCCC
Q 041249 152 GLKVIENLNLSYNDLE 167 (789)
Q Consensus 152 ~~~~l~~l~ls~N~~~ 167 (789)
.+++|+.|++++|+++
T Consensus 189 ~l~~L~~L~l~~N~l~ 204 (457)
T 3bz5_A 189 QNKLLNRLNCDTNNIT 204 (457)
T ss_dssp TCTTCCEEECCSSCCS
T ss_pred cCCCCCEEECcCCcCC
Confidence 4444455555544444
No 114
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.5e-35 Score=314.50 Aligned_cols=273 Identities=21% Similarity=0.327 Sum_probs=190.7
Q ss_pred HHHHHHhhcCCCCCCcccccCCccEEEEEEcCCce---EEEEEEeccc--cchhhHHHHHHHHHHhcCCCCccceeeeee
Q 041249 262 YQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRT---TVTVKVFNLH--HHRASRSFIAECRALRSIRHRNLVKVFTAC 336 (789)
Q Consensus 262 ~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 336 (789)
++++....++|...+.||+|+||+||+|.+..++. .||||+++.. .....+.+.+|++++++++||||+++++++
T Consensus 15 ~~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 94 (323)
T 3qup_A 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVS 94 (323)
T ss_dssp -CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred hhhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhcee
Confidence 34455567889999999999999999999876654 8999999755 344567899999999999999999999998
Q ss_pred ccCCCCC-CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCc
Q 041249 337 SGVDYQG-NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSN 415 (789)
Q Consensus 337 ~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~N 415 (789)
......+ ....++||||+.+|+|.+++.... .......+++.++..++.|++.||+|||+.+ |+||||||+|
T Consensus 95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~N 167 (323)
T 3qup_A 95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASR----IGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARN 167 (323)
T ss_dssp ECC-------CEEEEEECCTTCBHHHHHHHHH----C---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGG
T ss_pred eccccccCCCccEEEEEeccCCcHHHHHHhhh----ccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcce
Confidence 7654211 112489999999999999986431 1112336899999999999999999999998 9999999999
Q ss_pred eecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCC
Q 041249 416 ILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGD 494 (789)
Q Consensus 416 ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~ 494 (789)
|+++.++.+||+|||.++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 168 Ili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-- 245 (323)
T 3qup_A 168 CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-- 245 (323)
T ss_dssp EEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--
T ss_pred EEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--
Confidence 9999999999999999988765553333444557889999999988899999999999999999999 8999974321
Q ss_pred ccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 495 MNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
......+...... . ....+...+.+++..|++.++.+||+.......+.
T Consensus 246 ~~~~~~~~~~~~~--------~----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 246 AEIYNYLIGGNRL--------K----------------------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp GGHHHHHHTTCCC--------C----------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCC--------C----------------------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111111000 0 01123345668889999999999999877654444
No 115
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-35 Score=316.43 Aligned_cols=270 Identities=20% Similarity=0.283 Sum_probs=206.0
Q ss_pred HHHhhcCCCCCCcccccCCccEEEEEEc-----CCceEEEEEEeccc-cchhhHHHHHHHHHHhcC-CCCccceeeeeec
Q 041249 265 LHNATDGFSSANLIGTGSFGSVYKGVLD-----EGRTTVTVKVFNLH-HHRASRSFIAECRALRSI-RHRNLVKVFTACS 337 (789)
Q Consensus 265 ~~~~~~~f~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 337 (789)
.+...++|...+.||+|+||.||+|.+. .+++.||||+++.. .......+.+|++++.++ +||||+++++++.
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 4455688999999999999999999972 35678999999754 234457899999999999 8999999999987
Q ss_pred cCCCCCCceEEEEeeccCCCChhhhccCCCCCc-------------cccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCC
Q 041249 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNRED-------------EVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQP 404 (789)
Q Consensus 338 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-------------~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~ 404 (789)
... ..++||||+++|+|.+++......- ........+++..+..++.|++.||+|||+.+
T Consensus 120 ~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-- 192 (344)
T 1rjb_A 120 LSG-----PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-- 192 (344)
T ss_dssp SSS-----SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred eCC-----ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence 755 7899999999999999997642110 00011245899999999999999999999998
Q ss_pred CceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-h
Q 041249 405 ITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-R 483 (789)
Q Consensus 405 ~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G 483 (789)
|+||||||+||+++.++.+||+|||++................||+.|+|||.+.+..++.++||||||+++|||+| |
T Consensus 193 -ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 271 (344)
T 1rjb_A 193 -CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271 (344)
T ss_dssp -EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred -cccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999987765544333444567889999999988899999999999999999998 9
Q ss_pred cCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccC
Q 041249 484 KKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLE 563 (789)
Q Consensus 484 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~ 563 (789)
+.||...... ..+...++...... . ...+...+.+++..|++.++..||
T Consensus 272 ~~p~~~~~~~-~~~~~~~~~~~~~~--------~----------------------~~~~~~~l~~li~~~l~~dp~~Rp 320 (344)
T 1rjb_A 272 VNPYPGIPVD-ANFYKLIQNGFKMD--------Q----------------------PFYATEEIYIIMQSCWAFDSRKRP 320 (344)
T ss_dssp CCSSTTCCCS-HHHHHHHHTTCCCC--------C----------------------CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred CCCcccCCcH-HHHHHHHhcCCCCC--------C----------------------CCCCCHHHHHHHHHHcCCCchhCc
Confidence 9999743211 12222222111100 0 012234566788899999999999
Q ss_pred cccccccccc
Q 041249 564 SLKLAGSILP 573 (789)
Q Consensus 564 s~~~~~~~l~ 573 (789)
+...+...+.
T Consensus 321 s~~~l~~~l~ 330 (344)
T 1rjb_A 321 SFPNLTSFLG 330 (344)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9987755443
No 116
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3e-34 Score=303.53 Aligned_cols=273 Identities=21% Similarity=0.236 Sum_probs=200.4
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
++|...+.||+|+||+||+|.+..+++.||||+++.... .....+.+|++++++++||||+++++++.... ..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK-----KL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC-----EE
Confidence 467888999999999999999998999999999975432 33477889999999999999999999998765 89
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
++||||+.+ ++.+.+... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 77 ~lv~e~~~~-~l~~~~~~~---------~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~ 143 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSC---------NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLA 143 (292)
T ss_dssp EEEEECCSE-EHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCC-CHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEe
Confidence 999999986 555555322 356899999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCCC-cCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCC
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALP 506 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 506 (789)
|||.++....... ......||..|+|||.+.+.. ++.++|||||||++|||++|..|+.........+....+....
T Consensus 144 Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~ 221 (292)
T 3o0g_A 144 NFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221 (292)
T ss_dssp CCTTCEECCSCCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCC
T ss_pred ecccceecCCccc--cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC
Confidence 9999987654332 123356899999999988766 8999999999999999999998875332222222222222111
Q ss_pred Cc--hhhhc----cCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 507 DH--VMDIV----DSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 507 ~~--~~~~~----d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.. .+... +........ ...............+.+++..|.+.++..|++..++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 222 PTEEQWPSMTKLPDYKPYPMYP---------ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCTTTCTTGGGSTTCCCCCCCC---------TTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CChhhhhhhccccccccccccc---------CCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 10 10000 000000000 0000000111234456688889999999999998877543
No 117
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.3e-34 Score=307.20 Aligned_cols=276 Identities=21% Similarity=0.216 Sum_probs=199.4
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||+||+|.+. +++.||+|+++.... .....+.+|++++++++||||+++++++.... .
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER-----C 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS-----C
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC-----E
Confidence 367888999999999999999996 689999999865432 23467889999999999999999999987655 7
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+. |++.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 94 ~~lv~e~~~-~~l~~~~~~~---------~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl 160 (311)
T 3niz_A 94 LTLVFEFME-KDLKKVLDEN---------KTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKL 160 (311)
T ss_dssp EEEEEECCS-EEHHHHHHTC---------TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEcCCC-CCHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEE
Confidence 899999999 4788877543 345899999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
+|||+++....... ......||..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+.......-
T Consensus 161 ~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~ 237 (311)
T 3niz_A 161 ADFGLARAFGIPVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD-DQLPKIFSILG 237 (311)
T ss_dssp CCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT-THHHHHHHHHC
T ss_pred ccCcCceecCCCcc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHHC
Confidence 99999987654332 1233468999999999876 56899999999999999999999999754322 22222222111
Q ss_pred CCc---hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 506 PDH---VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 506 ~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
... .....+....... .+. ......+......+..++.+++..|.+.++..|++..++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 238 TPNPREWPQVQELPLWKQR-TFQ----VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp CCCTTTSGGGTTSHHHHSC-CCC----CCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCChHHhhhhhccchhhhc-ccc----cccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 110 1111000000000 000 000000000111233456788899999999999999877543
No 118
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.6e-34 Score=300.01 Aligned_cols=247 Identities=22% Similarity=0.281 Sum_probs=177.7
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
++|...+.||+|+||.||+|.+..+++.||+|++.... ......+.+|++++++++||||+++++++.... .
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 87 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD-----E 87 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----C
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-----e
Confidence 58999999999999999999999899999999986542 233567899999999999999999999997665 7
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+ ++++.+++... ..+++.++..++.|++.||+|||+.+ ++||||||+||++++++.+||
T Consensus 88 ~~lv~e~~-~~~l~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl 153 (275)
T 2eue_A 88 IIMVIEYA-GNELFDYIVQR----------DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKI 153 (275)
T ss_dssp EEEEEECC-CEEHHHHHHTS----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEE
T ss_pred EEEEehhc-CCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEE
Confidence 89999999 57888877543 46899999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCc-CccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV-STNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
+|||.+........ .....||..|+|||.+.+..+ ++++||||||+++|||++|+.||.... .....+...
T Consensus 154 ~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~ 225 (275)
T 2eue_A 154 ADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNIS 225 (275)
T ss_dssp CCSSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHH
T ss_pred eecccceeccCccc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHH
Confidence 99999987654432 223458999999999987765 789999999999999999999997321 111111110
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
... ..+. ..+...+.+++..|.+.++.+|++..++..+
T Consensus 226 ~~~------~~~~----------------------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 226 NGV------YTLP----------------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HTC------CCCC----------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred hCC------CCCC----------------------ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 000 0000 0122345678889999999999999877543
No 119
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=9.7e-35 Score=303.14 Aligned_cols=256 Identities=24% Similarity=0.352 Sum_probs=202.5
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
..++|...+.||+|+||.||+|.+. ++..||+|+++.... ..+.+.+|++++.+++||||+++++++.... ..
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 78 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY-----PI 78 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SE
T ss_pred chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----ce
Confidence 4567888999999999999999887 677899999975433 3467899999999999999999999987655 78
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
++||||+++|+|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~ 146 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSH---------GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVS 146 (268)
T ss_dssp EEEEECCTTCBHHHHHHHH---------GGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEEC
T ss_pred EEEEEccCCCcHHHHHHHc---------CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEc
Confidence 9999999999999998643 345899999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHHhCC
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARMALP 506 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 506 (789)
|||.+......... ......++..|+|||.+....++.++||||||+++|||++ |+.||+.... .........
T Consensus 147 Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~ 220 (268)
T 3sxs_A 147 DFGMTRYVLDDQYV-SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-----SEVVLKVSQ 220 (268)
T ss_dssp CTTCEEECCTTCEE-ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHHHHT
T ss_pred cCccceecchhhhh-cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-----HHHHHHHHc
Confidence 99999877655422 1223446778999999988889999999999999999999 9999973211 111111100
Q ss_pred CchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccccc
Q 041249 507 DHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPHI 575 (789)
Q Consensus 507 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~l 575 (789)
.. ....+ ..+...+.+++..|++.++..||+.......+..+
T Consensus 221 ~~--~~~~~-------------------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (268)
T 3sxs_A 221 GH--RLYRP-------------------------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262 (268)
T ss_dssp TC--CCCCC-------------------------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGG
T ss_pred CC--CCCCC-------------------------CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 00 00000 01223456788899999999999998875555443
No 120
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=315.91 Aligned_cols=209 Identities=14% Similarity=0.145 Sum_probs=175.9
Q ss_pred HHHhhcCCCCCCcccccCCccEEEEE-----EcCCceEEEEEEeccccchhhHHHHHHHHHHhcCC---CCccceeeeee
Q 041249 265 LHNATDGFSSANLIGTGSFGSVYKGV-----LDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR---HRNLVKVFTAC 336 (789)
Q Consensus 265 ~~~~~~~f~~~~~ig~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~ 336 (789)
+....++|...+.||+|+||+||+|. ...+++.||||+++.. ....+..|++++.+++ |+||+++++++
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 33456789999999999999999994 4567899999998644 3456777888888776 99999999999
Q ss_pred ccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCce
Q 041249 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNI 416 (789)
Q Consensus 337 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Ni 416 (789)
...+ ..++||||+.+|+|.+++... .......+++.++..|+.|++.||+|||+.+ ||||||||+||
T Consensus 137 ~~~~-----~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NI 203 (365)
T 3e7e_A 137 LFQN-----GSVLVGELYSYGTLLNAINLY-----KNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNF 203 (365)
T ss_dssp ECSS-----CEEEEECCCCSCBHHHHHHHH-----HTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGE
T ss_pred ecCC-----CcEEEEeccCCCcHHHHHHHh-----hcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHE
Confidence 8766 789999999999999999642 0112456999999999999999999999988 99999999999
Q ss_pred ecCC-----------CCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcC
Q 041249 417 LLDE-----------EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKK 485 (789)
Q Consensus 417 ll~~-----------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~ 485 (789)
|++. ++.+||+|||+|+...............||..|+|||++.+..++.++|||||||++|||+||+.
T Consensus 204 ll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~ 283 (365)
T 3e7e_A 204 ILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTY 283 (365)
T ss_dssp EECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSC
T ss_pred EecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence 9998 89999999999976543333333445679999999999999999999999999999999999999
Q ss_pred CCCc
Q 041249 486 PSDI 489 (789)
Q Consensus 486 P~~~ 489 (789)
||..
T Consensus 284 pf~~ 287 (365)
T 3e7e_A 284 MKVK 287 (365)
T ss_dssp CCEE
T ss_pred cccc
Confidence 9964
No 121
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.7e-34 Score=300.28 Aligned_cols=251 Identities=22% Similarity=0.225 Sum_probs=201.8
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.+.|...+.||+|+||+||+|.+..++..||+|.+........+.+.+|++++++++||||+++++++.... ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 82 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT-----DIY 82 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----eEE
Confidence 356888999999999999999999899999999997766666788999999999999999999999998765 789
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec---CCCCcee
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVSH 425 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill---~~~~~~k 425 (789)
+||||+.+++|.+++... ..+++.++..++.|++.||+|||+.+ ++||||||+||++ +.++.+|
T Consensus 83 lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~ 149 (277)
T 3f3z_A 83 LVMELCTGGELFERVVHK----------RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLK 149 (277)
T ss_dssp EEEECCCSCBHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEE
T ss_pred EEEeccCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEE
Confidence 999999999999988543 45899999999999999999999998 9999999999999 7889999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
|+|||.+........ .....||..|+|||.+.+ .++.++||||||+++|||++|+.||...... .....+....
T Consensus 150 l~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~ 223 (277)
T 3f3z_A 150 LIDFGLAARFKPGKM---MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--EVMLKIREGT 223 (277)
T ss_dssp ECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC
T ss_pred EEecccceeccCccc---hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCC
Confidence 999999987664432 233568999999998764 5999999999999999999999999742111 1111111000
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
.... ......+...+.+++..|.+.++..|++......
T Consensus 224 -----------~~~~----------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 224 -----------FTFP----------------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -----------CCCC----------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -----------CCCC----------------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 0000123345668888999999999999887644
No 122
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=6.4e-34 Score=323.26 Aligned_cols=206 Identities=25% Similarity=0.395 Sum_probs=180.6
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
.++|...+.||+|+||.||+|+...+++.||+|++.... ......+..|++++++++||||+++++++....
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----- 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT----- 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC-----
Confidence 468888999999999999999999899999999996442 233467889999999999999999999988765
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++.... .....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++++|
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~------~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vk 329 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVD------EDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVR 329 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSS------TTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEEeccCCCHHHHHHHhh------cccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEE
Confidence 8999999999999999986541 12356899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCcc
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIM 490 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~ 490 (789)
|+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 330 L~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 330 ISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp ECCCTTCEECCTTCCC--BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred EeecceeeeccCCCcc--cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 9999999987654321 23357999999999999989999999999999999999999999753
No 123
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.3e-34 Score=309.37 Aligned_cols=265 Identities=23% Similarity=0.299 Sum_probs=205.5
Q ss_pred hhcCCCCCCcccccCCccEEEEEEc-----CCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCC
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLD-----EGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDY 341 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 341 (789)
..++|...+.||+|+||.||+|.+. .+++.||||+++... ....+.+.+|++++++++||||+++++++....
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 99 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG- 99 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC-
Confidence 4567888999999999999999983 456899999997543 334577899999999999999999999987655
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCc--------------cccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCce
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNRED--------------EVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITT 407 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~--------------~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iv 407 (789)
..++||||+.+|+|.+++....... ........+++.++..++.|++.||+|||+.+ |+
T Consensus 100 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iv 172 (314)
T 2ivs_A 100 ----PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LV 172 (314)
T ss_dssp ----SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred ----ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Cc
Confidence 7899999999999999997542100 00012245899999999999999999999998 99
Q ss_pred ecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCC
Q 041249 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKP 486 (789)
Q Consensus 408 H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P 486 (789)
||||||+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.|
T Consensus 173 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 252 (314)
T 2ivs_A 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252 (314)
T ss_dssp CCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999987765543333334557889999999988889999999999999999999 9999
Q ss_pred CCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccc
Q 041249 487 SDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLK 566 (789)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~ 566 (789)
|..... ..+...+...... .. ...+...+.+++..|++.++.+||+..
T Consensus 253 ~~~~~~--~~~~~~~~~~~~~--------~~----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ 300 (314)
T 2ivs_A 253 YPGIPP--ERLFNLLKTGHRM--------ER----------------------PDNCSEEMYRLMLQCWKQEPDKRPVFA 300 (314)
T ss_dssp STTCCG--GGHHHHHHTTCCC--------CC----------------------CTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCH--HHHHHHhhcCCcC--------CC----------------------CccCCHHHHHHHHHHccCChhhCcCHH
Confidence 974321 1122222211110 00 012334566888999999999999988
Q ss_pred cccccc
Q 041249 567 LAGSIL 572 (789)
Q Consensus 567 ~~~~~l 572 (789)
.+...+
T Consensus 301 ~l~~~l 306 (314)
T 2ivs_A 301 DISKDL 306 (314)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 775443
No 124
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=310.65 Aligned_cols=243 Identities=23% Similarity=0.294 Sum_probs=199.8
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--------hhhHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--------RASRSFIAECRALRSIRHRNLVKVFTACSGVD 340 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 340 (789)
.++|...+.||+|+||+||+|.+..+++.||||+++.... .....+.+|++++++++||||+++++++....
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 4678999999999999999999998999999999975431 13346788999999999999999999997765
Q ss_pred CCCCceEEEEeeccCCC-ChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecC
Q 041249 341 YQGNDFKALVYEFMQNG-SLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD 419 (789)
Q Consensus 341 ~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~ 419 (789)
..++||||+..| +|.+++... ..+++..+..++.|++.||+|||..+ |+||||||+||+++
T Consensus 103 -----~~~lv~e~~~~g~~l~~~~~~~----------~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~ 164 (335)
T 3dls_A 103 -----FFQLVMEKHGSGLDLFAFIDRH----------PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIA 164 (335)
T ss_dssp -----EEEEEEECCTTSCBHHHHHHTC----------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC
T ss_pred -----EEEEEEEeCCCCccHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEc
Confidence 889999999877 999998644 46899999999999999999999998 99999999999999
Q ss_pred CCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCc-CccccchhhHHHHHHHHHhcCCCCccccCCccHH
Q 041249 420 EEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV-STNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498 (789)
Q Consensus 420 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~ 498 (789)
.++.+||+|||+++....... .....||..|+|||.+.+..+ +.++|||||||++|||++|+.||....+
T Consensus 165 ~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------ 235 (335)
T 3dls_A 165 EDFTIKLIDFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------ 235 (335)
T ss_dssp TTSCEEECCCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------
T ss_pred CCCcEEEeecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------
Confidence 999999999999998765442 234569999999999988776 8899999999999999999999973211
Q ss_pred HHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 499 NFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 499 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
........ ...+...+.+++..|++.++..|++...+...
T Consensus 236 -------------~~~~~~~~--------------------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 -------------TVEAAIHP--------------------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -------------GTTTCCCC--------------------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -------------HHhhccCC--------------------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11110000 00122345678889999999999998877554
No 125
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1e-34 Score=303.22 Aligned_cols=253 Identities=25% Similarity=0.352 Sum_probs=200.0
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.++|...+.||+|+||+||+|.+. +++.||+|++..... ..+.+.+|++++++++||||+++++++.... ..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-----PIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----ceE
Confidence 467888999999999999999997 578899999975432 3467899999999999999999999987655 789
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCc
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGD 428 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 428 (789)
+||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~D 149 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQ---------RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSD 149 (269)
T ss_dssp EEEECCTTCBHHHHHHTT---------TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECC
T ss_pred EEEEeCCCCcHHHHHHhc---------CcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecc
Confidence 999999999999999643 346899999999999999999999998 99999999999999999999999
Q ss_pred ccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHHhCCC
Q 041249 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARMALPD 507 (789)
Q Consensus 429 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 507 (789)
||.++....... .......++..|+|||.+....++.++||||||+++|||++ |+.||.... ...........
T Consensus 150 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~-----~~~~~~~~~~~ 223 (269)
T 4hcu_A 150 FGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----NSEVVEDISTG 223 (269)
T ss_dssp TTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTT
T ss_pred cccccccccccc-ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHHHhcC
Confidence 999987654321 11223446778999999988899999999999999999999 999997321 11111111000
Q ss_pred chhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 508 HVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 508 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
..+.. ...+...+.+++..|++.++.+||+.......+.
T Consensus 224 -----~~~~~----------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 224 -----FRLYK----------------------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp -----CCCCC----------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----ccCCC----------------------CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 00000 0012234567888999999999999887754433
No 126
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.6e-34 Score=304.73 Aligned_cols=258 Identities=16% Similarity=0.210 Sum_probs=203.1
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCCceE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
.++|...+.||+|+||.||+|....+++.||||++.... ....+.+|++.++++ +|+|++++++++.... ..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-----~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL-----HN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT-----EE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCc-----ee
Confidence 467889999999999999999998899999999985432 345688999999999 7999999999987665 88
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc----
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV---- 423 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~---- 423 (789)
++||||+ +++|.+++... +..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.
T Consensus 82 ~lv~e~~-~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~ 148 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLC---------GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNAN 148 (298)
T ss_dssp EEEEECC-CCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTT
T ss_pred EEEEEec-CCCHHHHHHHh---------ccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCC
Confidence 9999999 89999999643 345899999999999999999999988 999999999999987765
Q ss_pred -eeeCcccccccCCCCCCc-----cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCc--
Q 041249 424 -SHVGDFGLARFLPPTHVQ-----TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDM-- 495 (789)
Q Consensus 424 -~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~-- 495 (789)
+||+|||.++........ .......||..|+|||.+.+..++.++||||||+++|||++|+.||........
T Consensus 149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 228 (298)
T 1csn_A 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ 228 (298)
T ss_dssp CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH
Confidence 999999999987654321 123345699999999999999999999999999999999999999975322110
Q ss_pred cHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 496 NLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
.+........+.... .....+...+.+++..|++.++.+||+...+...+.
T Consensus 229 ~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 229 KYERIGEKKQSTPLR---------------------------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHHHHHHHHHHSCHH---------------------------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHhhccCccHH---------------------------HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 011111100000000 001123456778889999999999999987755444
No 127
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=306.23 Aligned_cols=283 Identities=24% Similarity=0.235 Sum_probs=202.5
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc-----hhhHHHHHHHHHHhcCC---CCccceeeeeeccC
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-----RASRSFIAECRALRSIR---HRNLVKVFTACSGV 339 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 339 (789)
.+++|...+.||+|+||+||+|.+..+++.||||+++.... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 46789999999999999999999988999999999864422 12346777887777764 99999999999775
Q ss_pred CCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecC
Q 041249 340 DYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD 419 (789)
Q Consensus 340 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~ 419 (789)
........++||||+. |+|.+++... ....+++.++..++.|++.||+|||+.+ |+||||||+||+++
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~ 154 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKA--------PPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVT 154 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTC--------CTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhc--------cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEc
Confidence 5334445799999998 6999998754 2345899999999999999999999998 99999999999999
Q ss_pred CCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHH
Q 041249 420 EEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN 499 (789)
Q Consensus 420 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~ 499 (789)
.++.+||+|||.++....... .....||..|+|||.+.+..++.++|||||||++|||++|+.||...... ..+..
T Consensus 155 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~ 230 (308)
T 3g33_A 155 SGGTVKLADFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGK 230 (308)
T ss_dssp TTSCEEECSCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHH
T ss_pred CCCCEEEeeCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH
Confidence 999999999999987654432 23456899999999999999999999999999999999999999743211 11112
Q ss_pred HHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 500 FARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 500 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
......... .+.+..........+ .. ...........+....+.+++..|.+.++..|++..++..+
T Consensus 231 i~~~~~~~~-~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 231 IFDLIGLPP-EDDWPRDVSLPRGAF--PP--RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HHHHHCCCC-TTTSCSSCSSCGGGS--CC--CCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhCCCC-hhhccchhhcccccc--CC--CCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 211111000 000000000000000 00 00000000111234556688889999999999999877543
No 128
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.5e-34 Score=305.34 Aligned_cols=258 Identities=26% Similarity=0.359 Sum_probs=188.9
Q ss_pred HhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 267 NATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 267 ~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
...+.|...+.||+|+||+||+|.+. ..||+|+++... ....+.+.+|++++++++||||+++++++...
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 92 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP----- 92 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred cCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC-----
Confidence 34568899999999999999999875 359999987553 33457799999999999999999999976432
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+.+++|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 93 -~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~ 159 (289)
T 3og7_A 93 -QLAIVTQWCEGSSLYHHLHAS---------ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTV 159 (289)
T ss_dssp -SCEEEEECCCEEEHHHHHTTC------------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred -ccEEEEEecCCCcHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCE
Confidence 579999999999999998643 356899999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCC---CCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHH
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL---GSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~ 501 (789)
||+|||+++...............||..|+|||.+. ...++.++||||||+++|||++|+.||...... ......+
T Consensus 160 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~ 238 (289)
T 3og7_A 160 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIEMV 238 (289)
T ss_dssp EECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-HHHHHHH
T ss_pred EEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-HHHHHHh
Confidence 999999998765443333334456999999999886 567899999999999999999999999743221 1122222
Q ss_pred HHhC-CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 502 RMAL-PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 502 ~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
.... ....... ...+...+.+++..|++.++.+||+.......+.
T Consensus 239 ~~~~~~~~~~~~---------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 284 (289)
T 3og7_A 239 GRGSLSPDLSKV---------------------------RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284 (289)
T ss_dssp HHTSCCCCTTSS---------------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccccCcchhhc---------------------------cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 1111 1100000 1133456678889999999999999887754433
No 129
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=316.75 Aligned_cols=268 Identities=21% Similarity=0.327 Sum_probs=208.3
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcC-------CceEEEEEEeccccc-hhhHHHHHHHHHHhcC-CCCccceeeeeecc
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDE-------GRTTVTVKVFNLHHH-RASRSFIAECRALRSI-RHRNLVKVFTACSG 338 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 338 (789)
..++|...+.||+|+||+||+|.+.. .++.||||+++.... .....+.+|+++++++ +||||+++++++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 45688889999999999999999742 346899999975533 3457799999999999 99999999999977
Q ss_pred CCCCCCceEEEEeeccCCCChhhhccCCCCCc------cccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCC
Q 041249 339 VDYQGNDFKALVYEFMQNGSLEEWLYPVNRED------EVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLK 412 (789)
Q Consensus 339 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk 412 (789)
.. ..++||||+.+|+|.+++....... ........+++.++..|+.|++.||+|||+.+ |+|||||
T Consensus 147 ~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlk 218 (382)
T 3tt0_A 147 DG-----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLA 218 (382)
T ss_dssp SS-----SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCC
T ss_pred CC-----ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCC
Confidence 65 7899999999999999997542110 01122356999999999999999999999998 9999999
Q ss_pred CCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccc
Q 041249 413 PSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMF 491 (789)
Q Consensus 413 ~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~ 491 (789)
|+||+++.++.+||+|||+++...............+|..|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 219 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~- 297 (382)
T 3tt0_A 219 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV- 297 (382)
T ss_dssp GGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-
T ss_pred cceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-
Confidence 9999999999999999999998765543333444567889999999999999999999999999999999 99998632
Q ss_pred cCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 492 EGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
...+..+...... .+. ....+...+.+++..|++.++.+||+..++...
T Consensus 298 ----~~~~~~~~~~~~~-----~~~----------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 298 ----PVEELFKLLKEGH-----RMD----------------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp ----CHHHHHHHHHTTC-----CCC----------------------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ----CHHHHHHHHHcCC-----CCC----------------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1122211111100 000 011233456688889999999999999888655
Q ss_pred cccc
Q 041249 572 LPHI 575 (789)
Q Consensus 572 l~~l 575 (789)
+..+
T Consensus 347 L~~~ 350 (382)
T 3tt0_A 347 LDRI 350 (382)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 130
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.7e-34 Score=308.65 Aligned_cols=273 Identities=22% Similarity=0.363 Sum_probs=197.3
Q ss_pred HHHHHHhhcCCCCCCcccccCCccEEEEEEcC---CceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeee
Q 041249 262 YQNLHNATDGFSSANLIGTGSFGSVYKGVLDE---GRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTAC 336 (789)
Q Consensus 262 ~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 336 (789)
+.++....++|...+.||+|+||.||+|.+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++
T Consensus 26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 105 (313)
T 3brb_A 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC 105 (313)
T ss_dssp TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence 34455567788899999999999999998864 45689999987553 33456799999999999999999999998
Q ss_pred ccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCce
Q 041249 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNI 416 (789)
Q Consensus 337 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Ni 416 (789)
......+....++||||+.+|+|.+++..... ......+++.++..++.|++.||.|||+.+ |+||||||+||
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NI 178 (313)
T 3brb_A 106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRL----ETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNC 178 (313)
T ss_dssp EC-------CEEEEEECCTTCBHHHHHHHTTB----TTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGE
T ss_pred eeccccCCcccEEEEecccCCCHHHHHHHhhh----hcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceE
Confidence 87653333456999999999999999853311 123467999999999999999999999988 99999999999
Q ss_pred ecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCc
Q 041249 417 LLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDM 495 (789)
Q Consensus 417 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~ 495 (789)
+++.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .
T Consensus 179 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~ 256 (313)
T 3brb_A 179 MLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--H 256 (313)
T ss_dssp EECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--G
T ss_pred EEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--H
Confidence 999999999999999987765443333344567889999999998899999999999999999999 8899864321 1
Q ss_pred cHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 496 NLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
.....+...... . ....+...+.+++..|++.++..||+.......+.
T Consensus 257 ~~~~~~~~~~~~--------~----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 304 (313)
T 3brb_A 257 EMYDYLLHGHRL--------K----------------------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304 (313)
T ss_dssp GHHHHHHTTCCC--------C----------------------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHcCCCC--------C----------------------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 122211111100 0 01123345668888999999999999887755443
No 131
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.6e-34 Score=315.82 Aligned_cols=207 Identities=21% Similarity=0.204 Sum_probs=178.4
Q ss_pred hhcCCCCCCccccc--CCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCC
Q 041249 268 ATDGFSSANLIGTG--SFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 268 ~~~~f~~~~~ig~G--~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 343 (789)
..++|...+.||+| +||+||+|.+..+++.||||+++... ....+.+.+|++++++++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 99 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--- 99 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC---
Confidence 35678899999999 99999999999899999999997553 334567888999999999999999999998766
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV 423 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~ 423 (789)
..++||||+.+|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.
T Consensus 100 --~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~ 166 (389)
T 3gni_B 100 --ELWVVTSFMAYGSAKDLICTH--------FMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGK 166 (389)
T ss_dssp --EEEEEEECCTTCBHHHHHHHT--------CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCC
T ss_pred --EEEEEEEccCCCCHHHHHhhh--------cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCC
Confidence 899999999999999998643 2345899999999999999999999998 999999999999999999
Q ss_pred eeeCcccccccCCCCCC-----ccceeeecccccccCcccCCC--CCcCccccchhhHHHHHHHHHhcCCCCcc
Q 041249 424 SHVGDFGLARFLPPTHV-----QTSSIGVKGSIGYIAPEYGLG--SEVSTNGDVYSYGILMLELIIRKKPSDIM 490 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~sfGvvl~elltG~~P~~~~ 490 (789)
+||+|||.+........ ........||..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 167 VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp EEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred EEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 99999998876533221 111223468899999999987 57999999999999999999999999743
No 132
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.5e-34 Score=324.52 Aligned_cols=252 Identities=24% Similarity=0.317 Sum_probs=200.7
Q ss_pred HHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 266 HNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 266 ~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
+...++|...+.||+|+||+||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++.... .
T Consensus 189 ~i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~ 260 (450)
T 1k9a_A 189 ALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK----G 260 (450)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT----S
T ss_pred ccChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC----C
Confidence 345678888999999999999999986 7899999997543 4578999999999999999999999986543 2
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++... ....+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+|
T Consensus 261 ~~~iv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~k 329 (450)
T 1k9a_A 261 GLYIVTEYMAKGSLVDYLRSR--------GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAK 329 (450)
T ss_dssp CEEEEEECCTTCBHHHHHHHH--------CTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCcHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEE
Confidence 589999999999999999643 2334789999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHHh
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARMA 504 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~ 504 (789)
|+|||+++...... ....++..|+|||.+....++.++|||||||++|||++ |+.||...... .....+...
T Consensus 330 l~DfG~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~ 402 (450)
T 1k9a_A 330 VSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKG 402 (450)
T ss_dssp ECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHHHTT
T ss_pred EeeCCCcccccccc-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC
Confidence 99999998654322 12356789999999999999999999999999999998 99999743211 122221111
Q ss_pred CCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 505 LPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 505 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
... .....|...+.+++..|++.++.+||+.......+.
T Consensus 403 ~~~------------------------------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 403 YKM------------------------------DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp CCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC------------------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 100 011134556778899999999999999987754443
No 133
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.5e-34 Score=313.84 Aligned_cols=201 Identities=26% Similarity=0.327 Sum_probs=167.6
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHH-HhcCCCCccceeeeeeccCCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRA-LRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
.++|...+.||+|+||.||+|+...+++.||+|+++... ......+..|..+ ++.++||||+++++++....
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~---- 112 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD---- 112 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC----
Confidence 467889999999999999999999899999999996543 2233456667776 57789999999999998766
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+.+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++
T Consensus 113 -~~~lv~E~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~i 178 (373)
T 2r5t_A 113 -KLYFVLDYINGGELFYHLQRE----------RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHI 178 (373)
T ss_dssp -EEEEEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCE
T ss_pred -EEEEEEeCCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCE
Confidence 899999999999999998643 46888999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 179 kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 241 (373)
T 2r5t_A 179 VLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 241 (373)
T ss_dssp EECCCCBCGGGBCCCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EEeeCccccccccCCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 9999999986433221 22345799999999999999999999999999999999999999973
No 134
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=305.77 Aligned_cols=252 Identities=26% Similarity=0.356 Sum_probs=190.2
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.++|...+.||+|+||+||+|.+. ++.||||.+... ...+.+.+|++++++++||||+++++++.+ ..+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~ 75 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN-------PVC 75 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT-------TTE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-------CcE
Confidence 356788899999999999999986 789999998633 345789999999999999999999998863 368
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc-eeeC
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV-SHVG 427 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~ 427 (789)
+||||+.+|+|.+++... .....+++..++.++.|+++||+|||+.+...|+||||||+||+++.++. +||+
T Consensus 76 lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~ 148 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGA-------EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 148 (307)
T ss_dssp EEEECCTTCBHHHHHHCS-------SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEEC
T ss_pred EEEEcCCCCCHHHHHhcc-------CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEc
Confidence 999999999999999754 12235788999999999999999999943334999999999999988876 7999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCC
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPD 507 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 507 (789)
|||.+....... ....||..|+|||.+.+..++.++||||||+++|||++|+.||+.................
T Consensus 149 Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-- 221 (307)
T 2eva_A 149 DFGTACDIQTHM-----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-- 221 (307)
T ss_dssp CCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTC--
T ss_pred cccccccccccc-----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCC--
Confidence 999997654322 2345899999999999999999999999999999999999999743221111111111000
Q ss_pred chhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 508 HVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 508 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
.+.. ...+...+.+++..|++.++.+||+...+...+.
T Consensus 222 ------~~~~----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 222 ------RPPL----------------------IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp ------CCCC----------------------BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------CCCc----------------------ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 0000 0122344667888999999999999887754443
No 135
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1e-34 Score=325.91 Aligned_cols=201 Identities=24% Similarity=0.293 Sum_probs=167.7
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
.++|...+.||+|+||.||+|....+++.||||+++.. .......+.+|+++++.++||||+++++++....
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----- 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----- 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT-----
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC-----
Confidence 46789999999999999999999999999999999644 2333466788999999999999999999998766
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhc-CCCCCceecCCCCCceecCCCCce
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHH-DCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~-~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~ 288 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRE----------RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHI 288 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHH----------SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCE
T ss_pred EEEEEEeeCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCE
Confidence 899999999999999998543 468999999999999999999997 77 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 289 kl~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 351 (446)
T 4ejn_A 289 KITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 351 (446)
T ss_dssp EECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEccCCCceeccCCCc--ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 9999999986543321 22346799999999999999999999999999999999999999963
No 136
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=5.2e-34 Score=320.39 Aligned_cols=249 Identities=22% Similarity=0.320 Sum_probs=201.2
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
++|...+.||+|+||.||+|.+..+++.||||+++... ......+.+|+++++.++||||+++++++.... .
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~-----~ 90 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS-----D 90 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-----E
Confidence 57888999999999999999999899999999996442 223467899999999999999999999998765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 91 ~~lv~E~~~gg~L~~~l~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL 157 (476)
T 2y94_A 91 IFMVMEYVSGGELFDYICKN----------GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKI 157 (476)
T ss_dssp EEEEEECCSSEEHHHHTTSS----------SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEeCCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEE
Confidence 99999999999999999643 46899999999999999999999988 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCc-CccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV-STNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
+|||+++....... .....||+.|+|||.+.+..+ +.++|||||||++|||++|+.||+... .....+...
T Consensus 158 ~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~~~~~~~i~ 229 (476)
T 2y94_A 158 ADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-----VPTLFKKIC 229 (476)
T ss_dssp CCCSSCEECCTTCC---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----SHHHHHHHH
T ss_pred Eeccchhhcccccc---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHh
Confidence 99999998765432 223569999999999988765 789999999999999999999997321 111111111
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
. ..... .......+.+++..|.+.++..|++...+..++
T Consensus 230 ~--------~~~~~--------------------p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp 268 (476)
T 2y94_A 230 D--------GIFYT--------------------PQYLNPSVISLLKHMLQVDPMKRATIKDIREHE 268 (476)
T ss_dssp T--------TCCCC--------------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCH
T ss_pred c--------CCcCC--------------------CccCCHHHHHHHHHHcCCCchhCcCHHHHHhCH
Confidence 1 00000 001123455778889999999999998776543
No 137
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=4e-34 Score=300.37 Aligned_cols=249 Identities=20% Similarity=0.296 Sum_probs=197.8
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
+.++|...+.||+|+||+||+|.+..+++.||+|++.... ......+.+|++++++++||||+++++++....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 82 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT---- 82 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC----
Confidence 4568889999999999999999999899999999985432 223567899999999999999999999997765
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 83 -~~~lv~e~~~~~~l~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~ 148 (279)
T 3fdn_A 83 -RVYLILEYAPLGTVYRELQKL----------SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 148 (279)
T ss_dssp -EEEEEECCCTTEEHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCE
T ss_pred -EEEEEEecCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCE
Confidence 789999999999999998643 45899999999999999999999888 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHh
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 504 (789)
||+|||++....... .....|+..|+|||.+.+..++.++||||||+++|||++|+.||... ......+..
T Consensus 149 ~l~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~~ 219 (279)
T 3fdn_A 149 KIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRI 219 (279)
T ss_dssp EECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHH
T ss_pred EEEeccccccCCccc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC-----cHHHHHHHH
Confidence 999999987654433 22356899999999999989999999999999999999999999732 111111111
Q ss_pred CCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 505 LPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 505 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.. ...... ......+.+++..|.+.++.+||+..++..+
T Consensus 220 ~~------~~~~~~----------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 220 SR------VEFTFP----------------------DFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HH------TCCCCC----------------------TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred Hh------CCCCCC----------------------CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 000000 0122345577889999999999998877554
No 138
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.6e-35 Score=328.64 Aligned_cols=263 Identities=22% Similarity=0.361 Sum_probs=207.7
Q ss_pred cHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 041249 261 SYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVD 340 (789)
Q Consensus 261 ~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 340 (789)
...+.+...++|...+.||+|+||+||+|.+. ++..||||+++... ...+.+.+|++++++++||||+++++++.. .
T Consensus 179 ~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~ 255 (454)
T 1qcf_A 179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E 255 (454)
T ss_dssp CTTCSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS-S
T ss_pred cccceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C
Confidence 34455667788999999999999999999997 57889999997543 346789999999999999999999999852 2
Q ss_pred CCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC
Q 041249 341 YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE 420 (789)
Q Consensus 341 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~ 420 (789)
..++||||+.+|+|.+++... ....+++.++..++.|+|.||+|||+.+ |+||||||+|||++.
T Consensus 256 -----~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~ 319 (454)
T 1qcf_A 256 -----PIYIITEFMAKGSLLDFLKSD--------EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSA 319 (454)
T ss_dssp -----SCEEEECCCTTCBHHHHHHSH--------HHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECT
T ss_pred -----ccEEEEeecCCCcHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECC
Confidence 579999999999999999643 2235788999999999999999999998 999999999999999
Q ss_pred CCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHH
Q 041249 421 EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHN 499 (789)
Q Consensus 421 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~ 499 (789)
++.+||+|||+++....... .......++..|+|||.+..+.++.++|||||||++|||++ |+.||..... .....
T Consensus 320 ~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--~~~~~ 396 (454)
T 1qcf_A 320 SLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIR 396 (454)
T ss_dssp TCCEEECSTTGGGGBCCHHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHH
T ss_pred CCcEEEeeCCCceEcCCCce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--HHHHH
Confidence 99999999999987654321 11123346788999999988899999999999999999999 9999973211 11111
Q ss_pred HHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccccc
Q 041249 500 FARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPHI 575 (789)
Q Consensus 500 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~l 575 (789)
.+...... .....|...+.+++..|++.++.+||++..+...+..+
T Consensus 397 ~i~~~~~~------------------------------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~ 442 (454)
T 1qcf_A 397 ALERGYRM------------------------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442 (454)
T ss_dssp HHHHTCCC------------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHcCCCC------------------------------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 11111100 00113455677889999999999999998876555443
No 139
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.5e-34 Score=316.43 Aligned_cols=254 Identities=19% Similarity=0.225 Sum_probs=192.3
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--------hhhHHHHHHHHHHhcCCCCccceeeeeeccC
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--------RASRSFIAECRALRSIRHRNLVKVFTACSGV 339 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 339 (789)
..++|...+.||+|+||+||+|....+++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 35789999999999999999999999999999999865421 1123588999999999999999999997532
Q ss_pred CCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecC
Q 041249 340 DYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD 419 (789)
Q Consensus 340 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~ 419 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++
T Consensus 213 ------~~~lv~e~~~~g~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~ 273 (419)
T 3i6u_A 213 ------DYYIVLELMEGGELFDKVVGN----------KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLS 273 (419)
T ss_dssp ------EEEEEEECCTTCBGGGGTSSS----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEES
T ss_pred ------ceEEEEEcCCCCcHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEe
Confidence 579999999999999988643 56899999999999999999999998 99999999999997
Q ss_pred CC---CceeeCcccccccCCCCCCccceeeecccccccCcccCCC---CCcCccccchhhHHHHHHHHHhcCCCCccccC
Q 041249 420 EE---MVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG---SEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493 (789)
Q Consensus 420 ~~---~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~ 493 (789)
.+ +.+||+|||+++...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||......
T Consensus 274 ~~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~ 350 (419)
T 3i6u_A 274 SQEEDCLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 350 (419)
T ss_dssp SSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS
T ss_pred cCCCcceEEEeecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch
Confidence 54 459999999999875433 2234569999999999863 56899999999999999999999999743221
Q ss_pred CccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 494 DMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
..+...+.........+ ........+.+++..|.+.++.+|++......+
T Consensus 351 -~~~~~~i~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 351 -VSLKDQITSGKYNFIPE---------------------------VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp -CCHHHHHHTTCCCCCHH---------------------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -HHHHHHHhcCCCCCCch---------------------------hhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 22222222111100000 001223456688889999999999999877544
No 140
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.5e-34 Score=299.50 Aligned_cols=253 Identities=20% Similarity=0.264 Sum_probs=201.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||.||+|.+..+++.||+|++.... ......+.+|++++++++||||+++++++.... .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES-----F 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC-----E
Confidence 468899999999999999999999899999999996543 234567889999999999999999999997665 7
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc---
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV--- 423 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~--- 423 (789)
.++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~ 146 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVAR----------EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAA 146 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCC
T ss_pred EEEEEecCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCc
Confidence 89999999999999888543 46899999999999999999999998 999999999999986655
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
+||+|||.+........ .....||..|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+..
T Consensus 147 ~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~ 221 (284)
T 3kk8_A 147 VKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKA 221 (284)
T ss_dssp EEECCCTTCEECCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH
T ss_pred EEEeeceeeEEcccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--hHHHHHHHh
Confidence 99999999987765432 2235689999999999999999999999999999999999999963211 111111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.... ...+ ....+...+.+++..|.+.++.+||+..+...+
T Consensus 222 ~~~~----~~~~-----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 222 GAYD----YPSP-----------------------EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TCCC----CCTT-----------------------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred cccc----CCch-----------------------hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1000 0000 001223445678889999999999999887554
No 141
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=6e-34 Score=305.50 Aligned_cols=253 Identities=19% Similarity=0.181 Sum_probs=202.7
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccch------hhHHHHHHHHHHhcCCCCccceeeeeeccCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR------ASRSFIAECRALRSIRHRNLVKVFTACSGVDYQ 342 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 342 (789)
.+.|...+.||+|+||.||+|....+++.||+|+++..... ....+.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 88 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT-- 88 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--
Confidence 35788899999999999999999989999999998654322 3567999999999999999999999987765
Q ss_pred CCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC
Q 041249 343 GNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM 422 (789)
Q Consensus 343 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~ 422 (789)
..++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++
T Consensus 89 ---~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~ 152 (321)
T 2a2a_A 89 ---DVVLILELVSGGELFDFLAQK----------ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKN 152 (321)
T ss_dssp ---EEEEEECCCCSCBHHHHHHTC----------SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTT
T ss_pred ---EEEEEEEcCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCC
Confidence 899999999999999999643 46889999999999999999999998 99999999999999887
Q ss_pred ----ceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHH
Q 041249 423 ----VSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498 (789)
Q Consensus 423 ----~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~ 498 (789)
.+||+|||++........ .....||..|+|||.+....++.++||||||+++|||++|+.||.... ..
T Consensus 153 ~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~ 224 (321)
T 2a2a_A 153 IPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQ 224 (321)
T ss_dssp SSSCCEEECCCTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HH
T ss_pred CCcCCEEEccCccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC-----HH
Confidence 799999999987765432 233568999999999998899999999999999999999999996321 11
Q ss_pred HHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 499 NFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 499 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
......... ..... ..........+.+++..|.+.++..|++......+
T Consensus 225 ~~~~~i~~~--------~~~~~----------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 225 ETLANITSV--------SYDFD----------------EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHHHHHTT--------CCCCC----------------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHhc--------ccccC----------------hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111000 00000 00001223456688889999999999999877554
No 142
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6e-34 Score=298.82 Aligned_cols=251 Identities=22% Similarity=0.311 Sum_probs=180.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
.++|...+.||+|+||.||+|....+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN----- 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS-----
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC-----
Confidence 357888999999999999999998899999999986442 223467899999999999999999999987765
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+++|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~k 152 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKNR---------VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIK 152 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHTC---------SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCcHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEE
Confidence 889999999999999998643 356899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
|+|||.+......... .....||..|+|||...+..++.++||||||+++|||++|+.||....... ......
T Consensus 153 l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~ 225 (278)
T 3cok_A 153 IADFGLATQLKMPHEK--HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----TLNKVV 225 (278)
T ss_dssp ECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CC
T ss_pred EEeecceeeccCCCCc--ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----HHHHHh
Confidence 9999999876543321 223568999999999998889999999999999999999999997432110 000000
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
. .+.... ......+.+++..|++.++.+||+...+..+
T Consensus 226 ~------~~~~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 226 L------ADYEMP----------------------SFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp S------SCCCCC----------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred h------cccCCc----------------------cccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0 000000 0122345678889999999999998877543
No 143
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-35 Score=315.03 Aligned_cols=254 Identities=19% Similarity=0.271 Sum_probs=191.7
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCC--CccceeeeeeccCCCCC
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRH--RNLVKVFTACSGVDYQG 343 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~ 343 (789)
..+.|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.+++| +||+++++++....
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--- 82 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--- 82 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS---
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC---
Confidence 3467888999999999999999986 68999999986543 3335778999999999976 99999999988765
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV 423 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~ 423 (789)
..++||| +.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++ ++.
T Consensus 83 --~~~lv~e-~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~ 145 (343)
T 3dbq_A 83 --YIYMVME-CGNIDLNSWLKKK----------KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGM 145 (343)
T ss_dssp --EEEEEEC-CCSEEHHHHHHHS----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTE
T ss_pred --EEEEEEe-CCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCc
Confidence 8999999 5678999999643 56899999999999999999999998 99999999999997 578
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCC-----------CCcCccccchhhHHHHHHHHHhcCCCCcccc
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-----------SEVSTNGDVYSYGILMLELIIRKKPSDIMFE 492 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DV~sfGvvl~elltG~~P~~~~~~ 492 (789)
+||+|||+++...............||+.|+|||++.. ..++.++|||||||++|||++|+.||.....
T Consensus 146 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 225 (343)
T 3dbq_A 146 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 225 (343)
T ss_dssp EEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred EEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh
Confidence 99999999998765554333445679999999999754 6789999999999999999999999974322
Q ss_pred CCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 493 GDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
. ..... .+.++....... ..+...+.+++..|++.++..|++...+..++
T Consensus 226 ~---~~~~~---------~~~~~~~~~~~~------------------~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 226 Q---ISKLH---------AIIDPNHEIEFP------------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp H---HHHHH---------HHHCTTSCCCCC------------------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred H---HHHHH---------HHhcCCcccCCc------------------ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 1 11111 111111111000 01123455788899999999999998875543
No 144
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.1e-34 Score=305.95 Aligned_cols=259 Identities=23% Similarity=0.351 Sum_probs=208.6
Q ss_pred HHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCC
Q 041249 264 NLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 264 ~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 343 (789)
+.+...++|...+.||+|+||+||+|.+..+++.||+|++.... ...+.+.+|++++++++||||+++++++....
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 82 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--- 82 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC---
Confidence 44456788999999999999999999999889999999996543 34567899999999999999999999987655
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV 423 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~ 423 (789)
..++||||+.+|+|.+++... ....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.
T Consensus 83 --~~~~v~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~ 149 (288)
T 3kfa_A 83 --PFYIITEFMTYGNLLDYLREC--------NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHL 149 (288)
T ss_dssp --SEEEEEECCTTEEHHHHHHHC--------CTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGC
T ss_pred --CEEEEEEcCCCCcHHHHHHhc--------ccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCC
Confidence 789999999999999999653 3356899999999999999999999998 999999999999999999
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHH
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFAR 502 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 502 (789)
+||+|||.+........ .......++..|+|||.+....++.++||||||+++|+|++ |+.||..... ......+.
T Consensus 150 ~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~~~~~~ 226 (288)
T 3kfa_A 150 VKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLE 226 (288)
T ss_dssp EEECCCCGGGTSCSSSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHH
T ss_pred EEEccCccceeccCCcc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHh
Confidence 99999999998765432 22234457789999999988899999999999999999999 9999874321 11222221
Q ss_pred HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 503 MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 503 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
...... ....+...+.+++..|.+.++..||+...+...+
T Consensus 227 ~~~~~~------------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l 266 (288)
T 3kfa_A 227 KDYRME------------------------------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266 (288)
T ss_dssp TTCCCC------------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ccCCCC------------------------------CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHH
Confidence 111100 0112334566888899999999999998775443
No 145
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6.1e-34 Score=301.36 Aligned_cols=254 Identities=20% Similarity=0.246 Sum_probs=197.1
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKAL 349 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 349 (789)
+.|.....||+|+||.||+|.+..+++.||||.+........+.+.+|+++++.++||||+++++++.... ..++
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~l 96 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG-----FIKI 96 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC-----cEEE
Confidence 45666779999999999999999899999999998766666788999999999999999999999997765 7899
Q ss_pred EeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC-CCceeeCc
Q 041249 350 VYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE-EMVSHVGD 428 (789)
Q Consensus 350 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~D 428 (789)
||||+.+++|.+++... .....+++..+..++.|++.||+|||+.+ ++||||||+||+++. ++.+||+|
T Consensus 97 v~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~D 166 (295)
T 2clq_A 97 FMEQVPGGSLSALLRSK-------WGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISD 166 (295)
T ss_dssp EEECCSEEEHHHHHHHT-------TCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECC
T ss_pred EEEeCCCCCHHHHHHhh-------ccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEee
Confidence 99999999999998643 12345678899999999999999999998 999999999999987 89999999
Q ss_pred ccccccCCCCCCccceeeecccccccCcccCCCCC--cCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCC
Q 041249 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSE--VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALP 506 (789)
Q Consensus 429 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 506 (789)
||.+........ ......|+..|+|||.+.... ++.++||||||+++|||++|+.||.................
T Consensus 167 fg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-- 242 (295)
T 2clq_A 167 FGTSKRLAGINP--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-- 242 (295)
T ss_dssp TTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC--
T ss_pred cccccccCCCCC--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc--
Confidence 999987654321 122356899999999987654 88999999999999999999999963211110110000000
Q ss_pred CchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 507 DHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 507 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
..+.+. ..+...+.+++..|++.++-.||+......
T Consensus 243 ------~~~~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 243 ------VHPEIP----------------------ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ------CCCCCC----------------------TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ------cccccc----------------------ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 011111 122345567888999999999999887643
No 146
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.4e-34 Score=300.62 Aligned_cols=250 Identities=24% Similarity=0.326 Sum_probs=188.4
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc----hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH----RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
.++|...+.||+|+||.||+|.+. ++.||||+++.... ...+.+.+|+++++.++||||+++++++....
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 79 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP---- 79 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-----
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC----
Confidence 467888999999999999999985 88999999865432 22467899999999999999999999987655
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC----
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE---- 420 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~---- 420 (789)
..++||||+.+|+|.+++.. +.+++..+..++.|++.||+|||+.+..+++||||||+||+++.
T Consensus 80 -~~~lv~e~~~~~~L~~~~~~-----------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~ 147 (271)
T 3dtc_A 80 -NLCLVMEFARGGPLNRVLSG-----------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN 147 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTS-----------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS
T ss_pred -ceEEEEEcCCCCCHHHHhhc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc
Confidence 78999999999999999842 36899999999999999999999988667999999999999986
Q ss_pred ----CCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCcc
Q 041249 421 ----EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMN 496 (789)
Q Consensus 421 ----~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~ 496 (789)
++.+||+|||.++....... ....|+..|+|||.+.+..+++++||||||+++|||++|+.||.....
T Consensus 148 ~~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---- 219 (271)
T 3dtc_A 148 GDLSNKILKITDFGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG---- 219 (271)
T ss_dssp SCCSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH----
T ss_pred ccccCcceEEccCCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----
Confidence 67899999999987654332 234689999999999888899999999999999999999999973211
Q ss_pred HHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 497 LHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 497 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
........... ..... ...+...+.+++..|++.++.+||+..+....
T Consensus 220 -~~~~~~~~~~~----~~~~~----------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 220 -LAVAYGVAMNK----LALPI----------------------PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp -HHHHHHHHTSC----CCCCC----------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred -HHHHHhhhcCC----CCCCC----------------------CcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 11111000000 00000 01233456688889999999999998876443
No 147
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.8e-34 Score=309.34 Aligned_cols=248 Identities=25% Similarity=0.272 Sum_probs=196.5
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc---hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
+.|...+.||+|+||+||+|....+++.||||++..... ...+.+.+|++++++++||||+++++++.... .
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH-----T 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----e
Confidence 457888999999999999999988999999999965432 23467899999999999999999999998765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+. |++.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 129 ~~lv~e~~~-g~l~~~l~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL 195 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEVH---------KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKL 195 (348)
T ss_dssp EEEEEECCS-EEHHHHHHHH---------TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEE
T ss_pred EEEEEecCC-CCHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEE
Confidence 899999998 6888877432 256899999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCC---CCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL---GSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
+|||+++...... ...||+.|+|||.+. .+.++.++|||||||++|||++|+.||.... .......
T Consensus 196 ~DfG~a~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-----~~~~~~~ 264 (348)
T 1u5q_A 196 GDFGSASIMAPAN------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYH 264 (348)
T ss_dssp CCCTTCBSSSSBC------CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHH
T ss_pred eeccCceecCCCC------cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHH
Confidence 9999998765432 346899999999874 5679999999999999999999999986321 1111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
.... ..+.... ..+...+.+++..|++.++..||+.......+
T Consensus 265 ~~~~-----~~~~~~~---------------------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 265 IAQN-----ESPALQS---------------------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp HHHS-----CCCCCCC---------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred HHhc-----CCCCCCC---------------------CCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 1000 0010000 01223455778899999999999998876544
No 148
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=7.1e-34 Score=309.77 Aligned_cols=255 Identities=21% Similarity=0.201 Sum_probs=192.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.++|...+.||+|+||+||++....+++.||||++.... .....+.+|+..+++++||||+++++++.... ..+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~ 92 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPT-----HLA 92 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC-----EEE
Confidence 468899999999999999999999999999999996443 23467889999999999999999999998765 899
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc--eee
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV--SHV 426 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl 426 (789)
+||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++. +||
T Consensus 93 lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl 159 (361)
T 3uc3_A 93 IIMEYASGGELYERICNA----------GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKI 159 (361)
T ss_dssp EEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEE
T ss_pred EEEEeCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEE
Confidence 999999999999998543 46899999999999999999999998 999999999999987765 999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCcc-ccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTN-GDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k-~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
+|||+++...... ......||+.|+|||.+.+..++.+ +|||||||++|||++|+.||...... ..+....+...
T Consensus 160 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~~~~~~ 235 (361)
T 3uc3_A 160 CDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP-RDYRKTIQRIL 235 (361)
T ss_dssp CCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C-CCHHHHHHHHH
T ss_pred eecCccccccccC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH-HHHHHHHHHHh
Confidence 9999998543322 1233569999999999988887655 99999999999999999999743221 22233222221
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
.... .+. ........+.+++..|++.++..|++...+..++
T Consensus 236 ~~~~------~~~--------------------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 236 SVKY------SIP--------------------DDIRISPECCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp TTCC------CCC--------------------TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred cCCC------CCC--------------------CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence 1100 000 0001223456788899999999999998876554
No 149
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.1e-34 Score=304.00 Aligned_cols=249 Identities=22% Similarity=0.297 Sum_probs=195.6
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCc-------eEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGR-------TTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDY 341 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 341 (789)
.++|...+.||+|+||+||+|.+..++ +.||+|++........+.+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD- 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC-
Confidence 457888899999999999999988655 579999997776667788999999999999999999999997655
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE 421 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~ 421 (789)
..++||||+.+|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.+
T Consensus 86 ----~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~ 149 (289)
T 4fvq_A 86 ----ENILVQEFVKFGSLDTYLKKN---------KNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIRE 149 (289)
T ss_dssp ----CCEEEEECCTTCBHHHHHHHT---------GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEEC
T ss_pred ----CCEEEEECCCCCCHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecC
Confidence 679999999999999999643 234899999999999999999999998 9999999999999988
Q ss_pred Cc--------eeeCcccccccCCCCCCccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCcccc
Q 041249 422 MV--------SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFE 492 (789)
Q Consensus 422 ~~--------~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~~~~ 492 (789)
+. +||+|||.+...... ....|+..|+|||.+.+ ..++.++||||||+++|||++|..|+.....
T Consensus 150 ~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~ 223 (289)
T 4fvq_A 150 EDRKTGNPPFIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD 223 (289)
T ss_dssp CBGGGTBCCEEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CcccccccceeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc
Confidence 87 999999998765332 23457889999999887 6799999999999999999996555432211
Q ss_pred CCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 493 GDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
. ......... ....... +...+.+++..|++.++.+||+...+...+
T Consensus 224 ~-~~~~~~~~~--~~~~~~~------------------------------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l 270 (289)
T 4fvq_A 224 S-QRKLQFYED--RHQLPAP------------------------------KAAELANLINNCMDYEPDHRPSFRAIIRDL 270 (289)
T ss_dssp H-HHHHHHHHT--TCCCCCC------------------------------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred h-HHHHHHhhc--cCCCCCC------------------------------CCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 1 011111110 0000000 011244677889999999999988775444
Q ss_pred c
Q 041249 573 P 573 (789)
Q Consensus 573 ~ 573 (789)
.
T Consensus 271 ~ 271 (289)
T 4fvq_A 271 N 271 (289)
T ss_dssp H
T ss_pred H
Confidence 3
No 150
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-33 Score=304.73 Aligned_cols=270 Identities=23% Similarity=0.309 Sum_probs=197.5
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhc--CCCCccceeeeeeccCCCCCCc
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRS--IRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~~~~~~ 345 (789)
..++|...+.||+|+||.||+|++. ++.||||++.... ...+..|.+++.. ++||||+++++++..... ...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~-~~~ 108 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTG-SWT 108 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG-GGC
T ss_pred cccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC-CCC
Confidence 3478999999999999999999986 8999999985332 2334445555554 489999999999876521 113
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCC-----CCCceecCCCCCceecCC
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDC-----QPITTHCDLKPSNILLDE 420 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-----~~~ivH~dlk~~Nill~~ 420 (789)
..++||||+.+|+|.+++.. ..+++.++..++.|++.||+|||+.+ .+.|+||||||+||+++.
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~ 177 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKS-----------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK 177 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred ceEEEEeccCCCcHHHHhhc-----------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC
Confidence 78999999999999999953 25899999999999999999999881 113999999999999999
Q ss_pred CCceeeCcccccccCCCCCCcc--ceeeecccccccCcccCCCCCcCcc------ccchhhHHHHHHHHHh---------
Q 041249 421 EMVSHVGDFGLARFLPPTHVQT--SSIGVKGSIGYIAPEYGLGSEVSTN------GDVYSYGILMLELIIR--------- 483 (789)
Q Consensus 421 ~~~~kl~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k------~DV~sfGvvl~elltG--------- 483 (789)
++.+||+|||+++......... ......||..|+|||.+....++.+ +|||||||++|||++|
T Consensus 178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~ 257 (337)
T 3mdy_A 178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257 (337)
T ss_dssp TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccc
Confidence 9999999999998765443211 1223469999999999987766555 9999999999999999
Q ss_pred -cCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEecc
Q 041249 484 -KKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDL 562 (789)
Q Consensus 484 -~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l 562 (789)
+.||............+........ ..+.+.. .....++...+.+++..|++.++.+|
T Consensus 258 ~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dP~~R 316 (337)
T 3mdy_A 258 YQLPYHDLVPSDPSYEDMREIVCIKK----LRPSFPN-----------------RWSSDECLRQMGKLMTECWAHNPASR 316 (337)
T ss_dssp CCCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCG-----------------GGGGSHHHHHHHHHHHHHSCSSGGGS
T ss_pred ccccHhhhcCCCCchhhhHHHHhhhc----cCccccc-----------------cchhhHHHHHHHHHHHHhhhhChhhC
Confidence 5555543333333333322221111 1111110 11223677788899999999999999
Q ss_pred Ccccccccccccc
Q 041249 563 ESLKLAGSILPHI 575 (789)
Q Consensus 563 ~s~~~~~~~l~~l 575 (789)
|+...+...+..+
T Consensus 317 ps~~ell~~L~~l 329 (337)
T 3mdy_A 317 LTALRVKKTLAKM 329 (337)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 9998876555443
No 151
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.7e-34 Score=308.45 Aligned_cols=267 Identities=22% Similarity=0.301 Sum_probs=206.7
Q ss_pred HhhcCCCCCCcccccCCccEEEEEE-----cCCceEEEEEEeccccc-hhhHHHHHHHHHHhcC-CCCccceeeeeeccC
Q 041249 267 NATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLHHH-RASRSFIAECRALRSI-RHRNLVKVFTACSGV 339 (789)
Q Consensus 267 ~~~~~f~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 339 (789)
...++|...+.||+|+||.||+|.+ ..+++.||||+++.... ...+.+.+|+++++++ +||||+++++++...
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 3456888899999999999999986 34678999999975543 3457799999999999 999999999999765
Q ss_pred CCCCCceEEEEeeccCCCChhhhccCCCCCc--------cccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCC
Q 041249 340 DYQGNDFKALVYEFMQNGSLEEWLYPVNRED--------EVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDL 411 (789)
Q Consensus 340 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~--------~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dl 411 (789)
. ..++||||+.+|+|.+++....... ........+++.++..++.|++.||+|||+.+ ++||||
T Consensus 100 ~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl 171 (313)
T 1t46_A 100 G-----PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDL 171 (313)
T ss_dssp S-----SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred C-----CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCC
Confidence 5 7899999999999999997542110 00112345899999999999999999999998 999999
Q ss_pred CCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCcc
Q 041249 412 KPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIM 490 (789)
Q Consensus 412 k~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~ 490 (789)
||+||+++.++.+||+|||.++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 172 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 172 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 99999999999999999999998776554333344557889999999988899999999999999999999 99999743
Q ss_pred ccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 491 FEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
... ............. .. ...+...+.+++..|++.++..||+...+..
T Consensus 252 ~~~-~~~~~~~~~~~~~--------~~----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 300 (313)
T 1t46_A 252 PVD-SKFYKMIKEGFRM--------LS----------------------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (313)
T ss_dssp CSS-HHHHHHHHHTCCC--------CC----------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cch-hHHHHHhccCCCC--------CC----------------------cccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 221 1122222211110 00 0122345667888999999999999887754
Q ss_pred cc
Q 041249 571 IL 572 (789)
Q Consensus 571 ~l 572 (789)
.+
T Consensus 301 ~L 302 (313)
T 1t46_A 301 LI 302 (313)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 152
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.2e-34 Score=308.33 Aligned_cols=201 Identities=23% Similarity=0.277 Sum_probs=165.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEc---CCceEEEEEEecccc----chhhHHHHHHHHHHhcCCCCccceeeeeeccCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLD---EGRTTVTVKVFNLHH----HRASRSFIAECRALRSIRHRNLVKVFTACSGVDY 341 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 341 (789)
.++|...+.||+|+||.||++... .+++.||+|+++... ......+.+|++++++++||||+++++++....
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG- 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC-
Confidence 467889999999999999999984 578999999997542 233456888999999999999999999997765
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE 421 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~ 421 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.+
T Consensus 95 ----~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~ 157 (327)
T 3a62_A 95 ----KLYLILEYLSGGELFMQLERE----------GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQ 157 (327)
T ss_dssp ----CEEEEEECCTTEEHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTT
T ss_pred ----EEEEEEeCCCCCcHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCC
Confidence 789999999999999998643 45789999999999999999999998 9999999999999999
Q ss_pred CceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 422 MVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 422 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
+.+||+|||+++....... ......||..|+|||.+....++.++|||||||++|||++|+.||..
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 223 (327)
T 3a62_A 158 GHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223 (327)
T ss_dssp SCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CcEEEEeCCcccccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence 9999999999986543321 12235689999999999998999999999999999999999999973
No 153
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=9.1e-34 Score=299.42 Aligned_cols=253 Identities=23% Similarity=0.316 Sum_probs=197.9
Q ss_pred CCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEE
Q 041249 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKAL 349 (789)
Q Consensus 272 f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 349 (789)
|...+.||+|+||+||+|.+..++..||+|.+.... ....+.+.+|++++++++||||+++++++.... .+....++
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~l 106 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSCEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-CCCceEEE
Confidence 566778999999999999999899999999986542 344577899999999999999999999876532 22346899
Q ss_pred EeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecC-CCCceeeCc
Q 041249 350 VYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD-EEMVSHVGD 428 (789)
Q Consensus 350 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~D 428 (789)
||||+.+|+|.+++... ..+++..+..++.|++.||+|||+.+ ++++||||||+||+++ +++.+||+|
T Consensus 107 v~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~D 175 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF----------KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGD 175 (290)
T ss_dssp EEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECC
T ss_pred EEEecCCCCHHHHHHHc----------cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEee
Confidence 99999999999999643 46889999999999999999999874 3599999999999998 789999999
Q ss_pred ccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCc
Q 041249 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDH 508 (789)
Q Consensus 429 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 508 (789)
||++....... .....||..|+|||.+. +.++.++||||||+++|+|++|+.||.... ......+......
T Consensus 176 fg~~~~~~~~~----~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~ 246 (290)
T 1t4h_A 176 LGLATLKRASF----AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGV 246 (290)
T ss_dssp TTGGGGCCTTS----BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTC
T ss_pred CCCcccccccc----cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC----cHHHHHHHHhccC
Confidence 99998655443 23456899999999876 569999999999999999999999996321 2222222221111
Q ss_pred hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 509 VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 509 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.....+ ..+...+.+++..|++.++..|++...+..+
T Consensus 247 ~~~~~~--------------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 247 KPASFD--------------------------KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp CCGGGG--------------------------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CccccC--------------------------CCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 000000 0112346688889999999999998876543
No 154
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=8.1e-35 Score=312.34 Aligned_cols=274 Identities=20% Similarity=0.306 Sum_probs=209.1
Q ss_pred ccHHHHHHhhcCCCCCCcccccCCccEEEEEEc-----CCceEEEEEEeccccc-hhhHHHHHHHHHHhcCCCCccceee
Q 041249 260 LSYQNLHNATDGFSSANLIGTGSFGSVYKGVLD-----EGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVF 333 (789)
Q Consensus 260 ~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~ 333 (789)
+..++++.+.++|...+.||+|+||.||+|.+. .+++.||||.+..... .....+.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344566677889999999999999999999886 3578899999975433 3456789999999999999999999
Q ss_pred eeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCC
Q 041249 334 TACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKP 413 (789)
Q Consensus 334 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~ 413 (789)
+++.... ..++||||+.+|+|.+++...............+++..+..++.|++.||+|||+.+ |+||||||
T Consensus 95 ~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp 166 (322)
T 1p4o_A 95 GVVSQGQ-----PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAA 166 (322)
T ss_dssp EEECSSS-----SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSG
T ss_pred EEEccCC-----ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCcc
Confidence 9987655 789999999999999998643110000111245789999999999999999999998 99999999
Q ss_pred CceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCcccc
Q 041249 414 SNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFE 492 (789)
Q Consensus 414 ~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~ 492 (789)
+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 167 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-- 244 (322)
T 1p4o_A 167 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-- 244 (322)
T ss_dssp GGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--
T ss_pred ceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC--
Confidence 999999999999999999987654332222233456889999999988889999999999999999999 89998632
Q ss_pred CCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 493 GDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
...+..+......... ....+...+.+++..|++.++..||+...+...+
T Consensus 245 ---~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L 294 (322)
T 1p4o_A 245 ---SNEQVLRFVMEGGLLD---------------------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294 (322)
T ss_dssp ---CHHHHHHHHHTTCCCC---------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ---CHHHHHHHHHcCCcCC---------------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 1112211111110000 0012334566788899999999999998875544
Q ss_pred c
Q 041249 573 P 573 (789)
Q Consensus 573 ~ 573 (789)
.
T Consensus 295 ~ 295 (322)
T 1p4o_A 295 K 295 (322)
T ss_dssp G
T ss_pred H
Confidence 4
No 155
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.8e-34 Score=317.74 Aligned_cols=252 Identities=19% Similarity=0.262 Sum_probs=191.8
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCC--CCccceeeeeeccCCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIR--HRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~~ 344 (789)
.+.|...+.||+|+||.||+|... +++.||||++.... ......+.+|++++.+++ ||||+++++++....
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~---- 129 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---- 129 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----
T ss_pred CCceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC----
Confidence 356889999999999999999987 48999999986543 334577999999999996 599999999988766
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||| +.+|+|.+++... ..+++.++..++.||+.||+|||+.+ |+||||||+|||++ ++.+
T Consensus 130 -~~~lv~E-~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~ 193 (390)
T 2zmd_A 130 -YIYMVME-CGNIDLNSWLKKK----------KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGML 193 (390)
T ss_dssp -EEEEEEE-CCSEEHHHHHHHC----------SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCE
T ss_pred -EEEEEEe-cCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeE
Confidence 7999999 5678999998644 46788999999999999999999988 99999999999995 5899
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCC-----------CCcCccccchhhHHHHHHHHHhcCCCCccccC
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-----------SEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~ 493 (789)
||+|||+++...............||+.|+|||++.. ..++.++|||||||++|||++|+.||......
T Consensus 194 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 273 (390)
T 2zmd_A 194 KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273 (390)
T ss_dssp EECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH
T ss_pred EEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH
Confidence 9999999998765543333344569999999998764 46899999999999999999999999732211
Q ss_pred CccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 494 DMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
..... .++++....... ..+...+.+++..|++.++..||+..++..+
T Consensus 274 ----~~~~~--------~~~~~~~~~~~~------------------~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 274 ----ISKLH--------AIIDPNHEIEFP------------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ----HHHHH--------HHHCTTSCCCCC------------------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----HHHHH--------HHhCccccCCCC------------------ccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11111 111111111000 0112345578889999999999999877544
No 156
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.4e-34 Score=320.77 Aligned_cols=203 Identities=26% Similarity=0.321 Sum_probs=160.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc--cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||+||+|.+..+++.||||++... .....+.+.+|++++++++||||+++++++..........
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36899999999999999999999989999999998643 3334577899999999999999999999997655444557
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+. |+|.+++... ..+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~----------~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl 197 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTP----------VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKV 197 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSS----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEE
T ss_pred EEEEEeccc-cchhhhcccC----------CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEee
Confidence 899999985 6899988543 56899999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCc-------------------------cceeeecccccccCcccC-CCCCcCccccchhhHHHHHHH
Q 041249 427 GDFGLARFLPPTHVQ-------------------------TSSIGVKGSIGYIAPEYG-LGSEVSTNGDVYSYGILMLEL 480 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~k~DV~sfGvvl~el 480 (789)
+|||+++........ .......||..|+|||++ ....++.++|||||||++|||
T Consensus 198 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~el 277 (458)
T 3rp9_A 198 CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277 (458)
T ss_dssp CCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred cccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHH
Confidence 999999987533211 123345689999999976 456699999999999999999
Q ss_pred HHhcC
Q 041249 481 IIRKK 485 (789)
Q Consensus 481 ltG~~ 485 (789)
++|..
T Consensus 278 ltg~~ 282 (458)
T 3rp9_A 278 LNMIK 282 (458)
T ss_dssp HTTST
T ss_pred HHhcc
Confidence 99533
No 157
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.6e-34 Score=313.57 Aligned_cols=203 Identities=24% Similarity=0.348 Sum_probs=164.2
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc--cchhhHHHHHHHHHHhcCC-CCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSIR-HRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~~~ 345 (789)
.++|...+.||+|+||.||+|.+..+++.||||++... .......+.+|+.++.++. ||||+++++++...+ ..
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~---~~ 84 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN---DR 84 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT---SS
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC---CC
Confidence 46888999999999999999999999999999998543 3344567889999999997 999999999986533 23
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+. |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+|
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~k 149 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRA-----------NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVK 149 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHH-----------TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEE
T ss_pred EEEEEecccC-cCHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEE
Confidence 6899999998 689888853 35889999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCC-------------------CccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcC
Q 041249 426 VGDFGLARFLPPTH-------------------VQTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKK 485 (789)
Q Consensus 426 l~Dfgla~~~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~ 485 (789)
|+|||+++...... .........||..|+|||.+.+ ..++.++|||||||++|||++|+.
T Consensus 150 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~ 229 (388)
T 3oz6_A 150 VADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP 229 (388)
T ss_dssp ECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred ecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCC
Confidence 99999998764321 1112234569999999999876 578999999999999999999999
Q ss_pred CCCc
Q 041249 486 PSDI 489 (789)
Q Consensus 486 P~~~ 489 (789)
||..
T Consensus 230 pf~~ 233 (388)
T 3oz6_A 230 IFPG 233 (388)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 9974
No 158
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.4e-35 Score=310.65 Aligned_cols=265 Identities=23% Similarity=0.307 Sum_probs=184.6
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhc--CCCCccceeeeeeccCCCCCCceE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRS--IRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
++|...+.||+|+||+||+|.+. ++.||||+++.. ....+..|.+++.. ++||||+++++++..... .....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~-~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECS-SSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCC-cccee
Confidence 57899999999999999999875 889999998533 34567778888887 799999999999876431 12257
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhh--------cCCCCCceecCCCCCceecC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLH--------HDCQPITTHCDLKPSNILLD 419 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~ivH~dlk~~Nill~ 419 (789)
++||||+.+|+|.+++... .+++.++..++.|++.||+||| ..+ |+||||||+||+++
T Consensus 77 ~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~ 142 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY-----------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVK 142 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC-----------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CC
T ss_pred EEEEeccCCCCHHHHHhcc-----------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEEC
Confidence 9999999999999999532 4778889999999999999999 666 99999999999999
Q ss_pred CCCceeeCcccccccCCCCCCcc--ceeeecccccccCcccCCCC------CcCccccchhhHHHHHHHHHhc-------
Q 041249 420 EEMVSHVGDFGLARFLPPTHVQT--SSIGVKGSIGYIAPEYGLGS------EVSTNGDVYSYGILMLELIIRK------- 484 (789)
Q Consensus 420 ~~~~~kl~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~sfGvvl~elltG~------- 484 (789)
.++.+||+|||+++......... ......||..|+|||.+.+. .+++++|||||||++|||++|.
T Consensus 143 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~ 222 (303)
T 3gxj_A 143 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 222 (303)
T ss_dssp TTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-
T ss_pred CCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccc
Confidence 99999999999998765444221 12334699999999998776 5568999999999999999994
Q ss_pred ---CCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEec
Q 041249 485 ---KPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILD 561 (789)
Q Consensus 485 ---~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~ 561 (789)
.||..............+ .+.+...+....+ .+...++...+.+++..|++.++.+
T Consensus 223 ~~~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-------------~~~~~~~~~~l~~li~~cl~~dP~~ 281 (303)
T 3gxj_A 223 DYQLPYYDLVPSDPSVEEMRK--------VVCEQKLRPNIPN-------------RWQSCEALRVMAKIMRECWYANGAA 281 (303)
T ss_dssp CCCCTTTTTCC-CCCCC-CHH--------HHTTSCCCCCCCG-------------GGGSSHHHHHHHHHHHTTCCSSGGG
T ss_pred eeeccccccCCCCccHHHHHH--------HHHHhhcCCCccc-------------cccchhhHHHHHHHHHHHhccCccc
Confidence 444322111111111111 1111111111100 1122356677889999999999999
Q ss_pred cCcccccccccccc
Q 041249 562 LESLKLAGSILPHI 575 (789)
Q Consensus 562 l~s~~~~~~~l~~l 575 (789)
||+...+...+..+
T Consensus 282 Rps~~~i~~~L~~l 295 (303)
T 3gxj_A 282 RLTALRIKKTLSQL 295 (303)
T ss_dssp SCCHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHh
Confidence 99998886555444
No 159
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.9e-34 Score=317.18 Aligned_cols=206 Identities=23% Similarity=0.295 Sum_probs=172.8
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc--cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||.||+|.+..+++.||||+++.. .....+.+.+|++++++++||||+++++++..........
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46899999999999999999999999999999999643 3334578899999999999999999999987765444457
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+. |+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~----------~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL 170 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP----------IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKV 170 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS----------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEecCC-cCHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEE
Confidence 899999987 5999998643 56899999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCc--------------------cceeeecccccccCcccC-CCCCcCccccchhhHHHHHHHHHhcC
Q 041249 427 GDFGLARFLPPTHVQ--------------------TSSIGVKGSIGYIAPEYG-LGSEVSTNGDVYSYGILMLELIIRKK 485 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~k~DV~sfGvvl~elltG~~ 485 (789)
+|||+++........ .......||..|+|||.+ ....++.++|||||||++|||++|..
T Consensus 171 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~ 250 (432)
T 3n9x_A 171 CDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ 250 (432)
T ss_dssp CCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCT
T ss_pred ccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccc
Confidence 999999987644321 123456789999999985 55669999999999999999998766
Q ss_pred CCC
Q 041249 486 PSD 488 (789)
Q Consensus 486 P~~ 488 (789)
||.
T Consensus 251 p~~ 253 (432)
T 3n9x_A 251 SHI 253 (432)
T ss_dssp TTC
T ss_pred ccc
Confidence 664
No 160
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.4e-34 Score=309.75 Aligned_cols=270 Identities=19% Similarity=0.224 Sum_probs=199.9
Q ss_pred HHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc-----cchhhHHHHHHHHHHhcCCCCccceeeeeecc
Q 041249 264 NLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH-----HHRASRSFIAECRALRSIRHRNLVKVFTACSG 338 (789)
Q Consensus 264 ~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 338 (789)
++....++|...+.||+|+||+||+|....+++.||+|++... .....+.+.+|++++++++||||+++++++..
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 4555678899999999999999999999989999999998644 23445789999999999999999999999977
Q ss_pred CCCCCCceEEEEeeccCCCChhhhccCCCCCc------------------------------cccCCCCCCCHHHHHHHH
Q 041249 339 VDYQGNDFKALVYEFMQNGSLEEWLYPVNRED------------------------------EVDKAPRNLNLLQRLNIA 388 (789)
Q Consensus 339 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~------------------------------~~~~~~~~l~~~~~~~i~ 388 (789)
.. ..++||||+.+|+|.+++....... ........+++..+..++
T Consensus 100 ~~-----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 174 (345)
T 3hko_A 100 EQ-----YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174 (345)
T ss_dssp SS-----EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred CC-----eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 65 8999999999999999985210000 000112234667788999
Q ss_pred HHHHHHHhhhhcCCCCCceecCCCCCceecCCCC--ceeeCcccccccCCCCC--CccceeeecccccccCcccCCC--C
Q 041249 389 IDVASALDYLHHDCQPITTHCDLKPSNILLDEEM--VSHVGDFGLARFLPPTH--VQTSSIGVKGSIGYIAPEYGLG--S 462 (789)
Q Consensus 389 ~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfgla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~--~ 462 (789)
.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+++...... .........||+.|+|||.+.. .
T Consensus 175 ~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 251 (345)
T 3hko_A 175 RQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE 251 (345)
T ss_dssp HHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSS
T ss_pred HHHHHHHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCC
Confidence 99999999999998 99999999999998776 89999999998764322 1112334569999999999865 6
Q ss_pred CcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHH
Q 041249 463 EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIE 542 (789)
Q Consensus 463 ~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (789)
.++.++|||||||++|||++|+.||..... .+..... ......... .....
T Consensus 252 ~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~~--------~~~~~~~~~----------------~~~~~ 302 (345)
T 3hko_A 252 SYGPKCDAWSAGVLLHLLLMGAVPFPGVND-----ADTISQV--------LNKKLCFEN----------------PNYNV 302 (345)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH--------HHCCCCTTS----------------GGGGG
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCCCCCh-----HHHHHHH--------HhcccccCC----------------ccccc
Confidence 789999999999999999999999963211 1111111 111100000 00012
Q ss_pred HHHHHHhhccccceeeEeccCccccccc
Q 041249 543 CLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 543 ~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
....+.+++..|++.++.+|++...+..
T Consensus 303 ~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 303 LSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp SCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 2345667888999999999999887644
No 161
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=313.04 Aligned_cols=265 Identities=18% Similarity=0.235 Sum_probs=196.5
Q ss_pred hcCCCCCCcccccCCccEEEEEEcC---CceEEEEEEeccccch-----------hhHHHHHHHHHHhcCCCCccceeee
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDE---GRTTVTVKVFNLHHHR-----------ASRSFIAECRALRSIRHRNLVKVFT 334 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~ 334 (789)
.++|...+.||+|+||+||+|.+.. ++..||||+....... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3578889999999999999999986 7889999998654322 1234678889999999999999999
Q ss_pred eeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCC
Q 041249 335 ACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPS 414 (789)
Q Consensus 335 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~ 414 (789)
++.... .+....++||||+ +++|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+
T Consensus 116 ~~~~~~-~~~~~~~lv~e~~-~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~ 180 (345)
T 2v62_A 116 SGLTEF-KGRSYRFMVMERL-GIDLQKISGQN----------GTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAA 180 (345)
T ss_dssp EEEEES-SSCEEEEEEEECE-EEEHHHHCBGG----------GBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGG
T ss_pred cccccc-CCCcEEEEEEecc-CCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHH
Confidence 987632 2234789999999 89999999644 37899999999999999999999998 999999999
Q ss_pred ceecCCCC--ceeeCcccccccCCCCCC-----ccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCC
Q 041249 415 NILLDEEM--VSHVGDFGLARFLPPTHV-----QTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPS 487 (789)
Q Consensus 415 Nill~~~~--~~kl~Dfgla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~ 487 (789)
||+++.++ .+||+|||+++....... ........||..|+|||.+.+..++.++|||||||++|||++|+.||
T Consensus 181 NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf 260 (345)
T 2v62_A 181 NLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPW 260 (345)
T ss_dssp GEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred HEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999887 999999999987754321 11123456999999999999889999999999999999999999999
Q ss_pred CccccCCccHHHHHHHh---CCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCc
Q 041249 488 DIMFEGDMNLHNFARMA---LPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLES 564 (789)
Q Consensus 488 ~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s 564 (789)
................. .+....+.. ....+...+.+++..|++.++.+||+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~l~~li~~~l~~dp~~Rps 315 (345)
T 2v62_A 261 EQNLKDPVAVQTAKTNLLDELPQSVLKWA-------------------------PSGSSCCEIAQFLVCAHSLAYDEKPN 315 (345)
T ss_dssp GGGTTCHHHHHHHHHHHHHTTTHHHHHHS-------------------------CTTSCCHHHHHHHHHHHTCCTTCCCC
T ss_pred cccccccHHHHHHHHhhcccccHHHHhhc-------------------------cccccHHHHHHHHHHHhhcCcccCCC
Confidence 64322211111111111 110000000 00123446778888999999999999
Q ss_pred ccccccccc
Q 041249 565 LKLAGSILP 573 (789)
Q Consensus 565 ~~~~~~~l~ 573 (789)
...+...+.
T Consensus 316 ~~~l~~~L~ 324 (345)
T 2v62_A 316 YQALKKILN 324 (345)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 988755444
No 162
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.2e-34 Score=313.91 Aligned_cols=255 Identities=17% Similarity=0.186 Sum_probs=190.1
Q ss_pred cCCCCC-CcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhc-CCCCccceeeeeeccCCCCCCceE
Q 041249 270 DGFSSA-NLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRS-IRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 270 ~~f~~~-~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
++|... +.||+|+||+||+|.+..+++.||||+++. ...+.+|++++.+ .+||||+++++++.... .+....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~-~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLY-AGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecc-cCCcEE
Confidence 456665 689999999999999998999999999853 2456788888754 48999999999876421 122368
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC---CCce
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE---EMVS 424 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~---~~~~ 424 (789)
++||||+.+|+|.+++... ....+++.++..|+.|++.||+|||+.+ |+||||||+|||++. ++.+
T Consensus 135 ~lv~E~~~gg~L~~~l~~~--------~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~ 203 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDR--------GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAIL 203 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----------CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCcHHHHHHHh--------CCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccE
Confidence 9999999999999999754 2346899999999999999999999998 999999999999998 7899
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCC--ccHHHHHH
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD--MNLHNFAR 502 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~--~~~~~~~~ 502 (789)
||+|||+++...... ......||..|+|||++....++.++|||||||++|||++|+.||....... ......+.
T Consensus 204 kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~ 280 (400)
T 1nxk_A 204 KLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 280 (400)
T ss_dssp EECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH
T ss_pred EEEecccccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH
Confidence 999999998765432 1234568999999999999999999999999999999999999997542211 11222211
Q ss_pred HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 503 MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 503 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
..... ...+ ....+...+.+++..|++.++..|++...+..+
T Consensus 281 ~~~~~----~~~~-----------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 281 MGQYE----FPNP-----------------------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HTCCC----CCTT-----------------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cCccc----CCCc-----------------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11000 0000 001233456688899999999999998877544
No 163
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.4e-34 Score=304.45 Aligned_cols=256 Identities=24% Similarity=0.360 Sum_probs=198.9
Q ss_pred HHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 265 LHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 265 ~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
.....++|...+.||+|+||+||+|.+. ++..||+|+++.... ..+.+.+|++++.+++||||+++++++....
T Consensus 19 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 92 (283)
T 3gen_A 19 WEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR---- 92 (283)
T ss_dssp TBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----
T ss_pred ccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC----
Confidence 3345678888999999999999999987 778899999975433 3467899999999999999999999987655
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 93 -~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~ 159 (283)
T 3gen_A 93 -PIFIITEYMANGCLLNYLREM---------RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVV 159 (283)
T ss_dssp -SEEEEECCCTTCBHHHHHHCG---------GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCE
T ss_pred -CeEEEEeccCCCcHHHHHHHh---------ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCE
Confidence 789999999999999999642 245899999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHH
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 503 (789)
||+|||.++........ ......+|..|+|||.+....++.++||||||+++|||++ |+.||...... .....+..
T Consensus 160 kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~ 236 (283)
T 3gen_A 160 KVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQ 236 (283)
T ss_dssp EECSTTGGGGBCCHHHH-STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHT
T ss_pred EEccccccccccccccc-cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhc
Confidence 99999999876543211 1123346788999999998899999999999999999998 99999732111 11111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
... ... ...+...+.+++..|++.++.+||+.......+
T Consensus 237 ~~~--------~~~----------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L 275 (283)
T 3gen_A 237 GLR--------LYR----------------------PHLASEKVYTIMYSCWHEKADERPTFKILLSNI 275 (283)
T ss_dssp TCC--------CCC----------------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred ccC--------CCC----------------------CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 100 000 001223466788899999999999998775433
No 164
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=309.27 Aligned_cols=257 Identities=22% Similarity=0.332 Sum_probs=195.1
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceE----EEEEEeccc-cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTT----VTVKVFNLH-HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 343 (789)
.++|...+.||+|+||+||+|.+..+++. ||+|.+... .....+.+.+|++++++++||||+++++++...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 89 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 89 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC----
Confidence 36788999999999999999999767665 477776533 334567899999999999999999999998753
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV 423 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~ 423 (789)
..++|+||+.+|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.
T Consensus 90 --~~~~v~~~~~~g~L~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~ 155 (327)
T 3lzb_A 90 --TVQLITQLMPFGCLLDYVREH---------KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp --SEEEEECCCSSCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTE
T ss_pred --CceEEEEecCCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCC
Confidence 478999999999999998643 346899999999999999999999998 999999999999999999
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHH
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFAR 502 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 502 (789)
+||+|||+++...............+|..|+|||.+.+..++.++|||||||++|||++ |+.||...... .+...+.
T Consensus 156 ~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~ 233 (327)
T 3lzb_A 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE 233 (327)
T ss_dssp EEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHH
T ss_pred EEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHH
Confidence 99999999998765554333444557889999999999999999999999999999999 99999743221 2222222
Q ss_pred HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccccc
Q 041249 503 MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPHI 575 (789)
Q Consensus 503 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~l 575 (789)
...... ....+...+.+++..|++.++..||+.......+..+
T Consensus 234 ~~~~~~------------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 234 KGERLP------------------------------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp TTCCCC------------------------------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCC------------------------------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 111100 0112334566788899999999999998876555444
No 165
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.7e-33 Score=297.90 Aligned_cols=250 Identities=20% Similarity=0.221 Sum_probs=201.5
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
.++|...+.||+|+||.||+|....+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----- 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC-----
Confidence 357888999999999999999999899999999986542 234567899999999999999999999997765
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+++|.+++... ..+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+|
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~k 155 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKRR----------KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVK 155 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEE
T ss_pred EEEEEEecCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEE
Confidence 789999999999999988543 46899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
|+|||.+......... .....|+..|+|||.+.+..++.++||||||+++|||++|+.||.... ..+......
T Consensus 156 l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~ 228 (294)
T 2rku_A 156 IGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----LKETYLRIK 228 (294)
T ss_dssp ECCCTTCEECCSTTCC--BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHH
T ss_pred EEeccCceecccCccc--cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHh
Confidence 9999999876543321 223568999999999998889999999999999999999999997321 111111110
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
... ..+. ......+.+++..|++.++..|++.......
T Consensus 229 ~~~------~~~~----------------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 229 KNE------YSIP----------------------KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TTC------CCCC----------------------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hcc------CCCc----------------------cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 0000 0112345577889999999999999887543
No 166
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.3e-34 Score=325.26 Aligned_cols=259 Identities=26% Similarity=0.418 Sum_probs=198.6
Q ss_pred HHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCC
Q 041249 263 QNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQ 342 (789)
Q Consensus 263 ~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 342 (789)
.+.+...++|...+.||+|+||+||+|.+. ++..||||+++... ...+.+.+|++++++++||||+++++++.. .
T Consensus 177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~-- 251 (452)
T 1fmk_A 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E-- 251 (452)
T ss_dssp TCSBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--
T ss_pred cccccChhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--
Confidence 344556678888999999999999999997 45779999997543 235679999999999999999999999864 2
Q ss_pred CCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC
Q 041249 343 GNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM 422 (789)
Q Consensus 343 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~ 422 (789)
..++||||+.+|+|.+++... ....+++.++..++.|++.||+|||+.+ |+||||||+|||+++++
T Consensus 252 ---~~~iv~e~~~~gsL~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~ 317 (452)
T 1fmk_A 252 ---PIYIVTEYMSKGSLLDFLKGE--------TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENL 317 (452)
T ss_dssp ---SCEEEECCCTTCBHHHHHSHH--------HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGG
T ss_pred ---ceEEEehhhcCCCHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCC
Confidence 579999999999999999632 2245899999999999999999999998 99999999999999999
Q ss_pred ceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHH
Q 041249 423 VSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFA 501 (789)
Q Consensus 423 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~ 501 (789)
.+||+|||+++........ ......++..|+|||.+..+.++.++|||||||++|||++ |+.||..... ......+
T Consensus 318 ~~kl~DfG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i 394 (452)
T 1fmk_A 318 VCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQV 394 (452)
T ss_dssp CEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHH
T ss_pred CEEECCCccceecCCCcee-cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence 9999999999877543311 1223457789999999988899999999999999999999 9999963211 0111111
Q ss_pred HHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 502 RMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 502 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
...... .....|...+.+++..|++.++.+||+.......+.
T Consensus 395 ~~~~~~------------------------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~ 436 (452)
T 1fmk_A 395 ERGYRM------------------------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436 (452)
T ss_dssp HTTCCC------------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HcCCCC------------------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111000 001134456778899999999999999987754443
No 167
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.7e-34 Score=310.59 Aligned_cols=265 Identities=23% Similarity=0.302 Sum_probs=207.0
Q ss_pred cCCCCCCcccccCCccEEEEEE----cCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 270 DGFSSANLIGTGSFGSVYKGVL----DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
++|...+.||+|+||.||+|.+ ..+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG---RQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS---SC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC---Cc
Confidence 5788899999999999999994 5678999999998776666778999999999999999999999886432 23
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~k 167 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRH---------RARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVK 167 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHH---------GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEE
T ss_pred eEEEEEeecCCCCHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEE
Confidence 689999999999999998642 235899999999999999999999988 99999999999999999999
Q ss_pred eCcccccccCCCCCCcc-ceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHh
Q 041249 426 VGDFGLARFLPPTHVQT-SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 504 (789)
|+|||.++......... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||..... .+....
T Consensus 168 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~------~~~~~~ 241 (327)
T 3lxl_A 168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA------EFLRMM 241 (327)
T ss_dssp ECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH------HHHHHC
T ss_pred EcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccc------hhhhhc
Confidence 99999999876554321 22334588889999999888899999999999999999999999863211 111100
Q ss_pred CC----Cc---hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 505 LP----DH---VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 505 ~~----~~---~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
.. .. ..+.+.... +......+...+.+++..|++.++.+||+...+...+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 242 GCERDVPALSRLLELLEEGQ------------------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp C----CCHHHHHHHHHHTTC------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccccccccHHHHHHHhhccc------------------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 00 00 000000000 01111234556778899999999999999988755443
No 168
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.3e-34 Score=307.79 Aligned_cols=277 Identities=21% Similarity=0.229 Sum_probs=211.7
Q ss_pred cccHHHHHHhhcCCCCCCcccccCCccEEEEEEc-----CCceEEEEEEeccccc-hhhHHHHHHHHHHhcC-CCCccce
Q 041249 259 NLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLD-----EGRTTVTVKVFNLHHH-RASRSFIAECRALRSI-RHRNLVK 331 (789)
Q Consensus 259 ~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~ 331 (789)
.+...++....++|...+.||+|+||+||+|.+. .+++.||||+++.... ...+.+.+|++++.++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 4556666777889999999999999999999863 4678999999975533 3456789999999999 7999999
Q ss_pred eeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCcc------ccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCC
Q 041249 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDE------VDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPI 405 (789)
Q Consensus 332 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ 405 (789)
+++++.... ...++||||+.+|+|.+++........ .......+++..+..++.|++.||+|||+.+
T Consensus 96 ~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--- 168 (316)
T 2xir_A 96 LLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--- 168 (316)
T ss_dssp EEEEECCTT----SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred EEEEEecCC----CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---
Confidence 999986543 257999999999999999976521100 0001233889999999999999999999998
Q ss_pred ceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hc
Q 041249 406 TTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RK 484 (789)
Q Consensus 406 ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~ 484 (789)
|+||||||+||+++.++.+||+|||.++...............||..|+|||.+.+..++.++||||||+++|||++ |+
T Consensus 169 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~ 248 (316)
T 2xir_A 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248 (316)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred cccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999997765544333445568889999999988899999999999999999998 99
Q ss_pred CCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCc
Q 041249 485 KPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLES 564 (789)
Q Consensus 485 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s 564 (789)
.||....... .+...+....... .. ..+...+.+++..|++.++..||+
T Consensus 249 ~p~~~~~~~~-~~~~~~~~~~~~~--------~~----------------------~~~~~~l~~li~~~l~~dp~~Rps 297 (316)
T 2xir_A 249 SPYPGVKIDE-EFCRRLKEGTRMR--------AP----------------------DYTTPEMYQTMLDCWHGEPSQRPT 297 (316)
T ss_dssp CSSTTCCCSH-HHHHHHHHTCCCC--------CC----------------------TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCcccchhH-HHHHHhccCccCC--------CC----------------------CCCCHHHHHHHHHHcCCChhhCcC
Confidence 9997432211 1111111111100 00 012234567888999999999999
Q ss_pred ccccccccc
Q 041249 565 LKLAGSILP 573 (789)
Q Consensus 565 ~~~~~~~l~ 573 (789)
...+...+.
T Consensus 298 ~~ell~~L~ 306 (316)
T 2xir_A 298 FSELVEHLG 306 (316)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887755443
No 169
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=9.1e-34 Score=303.28 Aligned_cols=265 Identities=22% Similarity=0.213 Sum_probs=195.6
Q ss_pred cCCCC-CCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCCceE
Q 041249 270 DGFSS-ANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 270 ~~f~~-~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
+.|.. .+.||+|+||+||+|....+++.||||++..........+.+|++++.++ +||||+++++++.... ..
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~-----~~ 86 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED-----RF 86 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC-----EE
Confidence 45666 47899999999999999889999999999766656677899999999985 7999999999998765 89
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc---e
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV---S 424 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~---~ 424 (789)
++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++. +
T Consensus 87 ~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~ 153 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKR----------RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPV 153 (316)
T ss_dssp EEEEECCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSE
T ss_pred EEEEEcCCCCcHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCce
Confidence 9999999999999998643 46899999999999999999999998 999999999999998775 9
Q ss_pred eeCcccccccCCCCCC-----ccceeeecccccccCcccCCC-----CCcCccccchhhHHHHHHHHHhcCCCCccccCC
Q 041249 425 HVGDFGLARFLPPTHV-----QTSSIGVKGSIGYIAPEYGLG-----SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~ 494 (789)
||+|||++........ ........||..|+|||.+.. ..++.++|||||||++|||++|+.||.......
T Consensus 154 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 233 (316)
T 2ac3_A 154 KICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233 (316)
T ss_dssp EECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSC
T ss_pred EEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccc
Confidence 9999999987653321 111223459999999999865 568999999999999999999999997543221
Q ss_pred ccHHHHHHHhCC----Cc-hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccc
Q 041249 495 MNLHNFARMALP----DH-VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAG 569 (789)
Q Consensus 495 ~~~~~~~~~~~~----~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~ 569 (789)
.... ..... .. ...+....... +..........+.+++..|.+.++..|++..++.
T Consensus 234 ~~~~---~~~~~~~~~~~~~~~i~~~~~~~----------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l 294 (316)
T 2ac3_A 234 CGWD---RGEACPACQNMLFESIQEGKYEF----------------PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVL 294 (316)
T ss_dssp SCC-------CCHHHHHHHHHHHHHCCCCC----------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred cccc---ccccchhHHHHHHHHHhccCccc----------------CchhcccCCHHHHHHHHHHhhCChhhCCCHHHHh
Confidence 1000 00000 00 00000000000 0000112334567888999999999999998775
Q ss_pred cc
Q 041249 570 SI 571 (789)
Q Consensus 570 ~~ 571 (789)
.+
T Consensus 295 ~h 296 (316)
T 2ac3_A 295 QH 296 (316)
T ss_dssp HS
T ss_pred cC
Confidence 43
No 170
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=305.44 Aligned_cols=274 Identities=22% Similarity=0.279 Sum_probs=193.1
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
-++|...+.||+|+||.||+|.+ +++.||||+++..... ....+.|+..+..++||||+++++.+......+....+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQ-NFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccchh-hHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 46888899999999999999987 5899999998643321 12223444445568999999999876554444555679
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC---------CCCCceecCCCCCceecC
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD---------CQPITTHCDLKPSNILLD 419 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~---------~~~~ivH~dlk~~Nill~ 419 (789)
+||||+++|+|.+++... ..++..+..++.|++.||+|||+. + |+||||||+|||++
T Consensus 89 lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~ 154 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLH-----------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVK 154 (336)
T ss_dssp EEECCCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEEC
T ss_pred EEEecCCCCcHHHHHhhc-----------ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEc
Confidence 999999999999999543 348889999999999999999988 6 99999999999999
Q ss_pred CCCceeeCcccccccCCCCCC------ccceeeecccccccCcccCCC-------CCcCccccchhhHHHHHHHHHhcCC
Q 041249 420 EEMVSHVGDFGLARFLPPTHV------QTSSIGVKGSIGYIAPEYGLG-------SEVSTNGDVYSYGILMLELIIRKKP 486 (789)
Q Consensus 420 ~~~~~kl~Dfgla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~k~DV~sfGvvl~elltG~~P 486 (789)
.++.+||+|||+++....... ........||..|+|||.+.+ ..++.++|||||||++|||++|+.|
T Consensus 155 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p 234 (336)
T 3g2f_A 155 NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTD 234 (336)
T ss_dssp TTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGG
T ss_pred CCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCc
Confidence 999999999999987754321 112223469999999999876 4578899999999999999999887
Q ss_pred CCccccCCccHHHHHHHhCCCc-h---hh-hccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEec
Q 041249 487 SDIMFEGDMNLHNFARMALPDH-V---MD-IVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILD 561 (789)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~-~---~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~ 561 (789)
+............+........ . .. ......+....+ .......+...+.+++..|++.++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~li~~cl~~dP~~ 302 (336)
T 3g2f_A 235 LFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE------------AWKENSLAVRSLKETIEDCWDQDAEA 302 (336)
T ss_dssp GSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT------------TCCCCSHHHHHHHHHHHHHSCSSGGG
T ss_pred CCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCc------------ccccccchHHHHHHHHHHHhcCChhh
Confidence 7532211100000000000000 0 00 000000000000 00011235567889999999999999
Q ss_pred cCcccccccc
Q 041249 562 LESLKLAGSI 571 (789)
Q Consensus 562 l~s~~~~~~~ 571 (789)
||+..++...
T Consensus 303 Rps~~e~l~~ 312 (336)
T 3g2f_A 303 RLTAQXAEER 312 (336)
T ss_dssp SCCHHHHHHH
T ss_pred CcchHHHHHH
Confidence 9999887443
No 171
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.4e-34 Score=305.01 Aligned_cols=200 Identities=25% Similarity=0.325 Sum_probs=169.8
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
++|...+.||+|+||+||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++.... ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR-----RL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC-----eE
Confidence 568888999999999999999998999999999865433 23567889999999999999999999998765 78
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
++||||+.++++.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 78 ~lv~e~~~~~~l~~~~~~~----------~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~ 144 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDRYQ----------RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLC 144 (311)
T ss_dssp EEEEECCSEEHHHHHHHTS----------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCchHHHHHhhh----------cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEe
Confidence 9999999999999887543 56899999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|||.+........ ......||..|+|||.+.+ ..++.++||||||+++|||++|+.||..
T Consensus 145 Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 205 (311)
T 4agu_A 145 DFGFARLLTGPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPG 205 (311)
T ss_dssp CCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred eCCCchhccCccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 9999987654332 1234568999999999876 5689999999999999999999999974
No 172
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.2e-34 Score=307.78 Aligned_cols=268 Identities=20% Similarity=0.307 Sum_probs=204.5
Q ss_pred hhcCCCCCCcccccCCccEEEEEEc-------CCceEEEEEEeccccc-hhhHHHHHHHHHHhcC-CCCccceeeeeecc
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLD-------EGRTTVTVKVFNLHHH-RASRSFIAECRALRSI-RHRNLVKVFTACSG 338 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 338 (789)
..++|...+.||+|+||.||+|.+. .+++.||||+++.... .....+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3468888999999999999999975 3567899999975533 3456789999999999 89999999999876
Q ss_pred CCCCCCceEEEEeeccCCCChhhhccCCCCCcc------ccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCC
Q 041249 339 VDYQGNDFKALVYEFMQNGSLEEWLYPVNREDE------VDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLK 412 (789)
Q Consensus 339 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk 412 (789)
.. ..++||||+.+|+|.+++........ .......+++.++..++.|++.||+|||+.+ |+|||||
T Consensus 113 ~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlk 184 (334)
T 2pvf_A 113 DG-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLA 184 (334)
T ss_dssp SS-----CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCS
T ss_pred CC-----ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCc
Confidence 55 78999999999999999976521100 0011345899999999999999999999998 9999999
Q ss_pred CCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccc
Q 041249 413 PSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMF 491 (789)
Q Consensus 413 ~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~ 491 (789)
|+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 185 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 264 (334)
T 2pvf_A 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264 (334)
T ss_dssp GGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence 9999999999999999999998765543333334557889999999988889999999999999999999 999996321
Q ss_pred cCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 492 EGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
. ..+...+...... .. ...+...+.+++..|++.++..||+...+...
T Consensus 265 ~--~~~~~~~~~~~~~--------~~----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 265 V--EELFKLLKEGHRM--------DK----------------------PANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp H--HHHHHHHHHTCCC--------CC----------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred H--HHHHHHHhcCCCC--------CC----------------------CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1 1111111111100 00 01233456678889999999999999887655
Q ss_pred cccc
Q 041249 572 LPHI 575 (789)
Q Consensus 572 l~~l 575 (789)
+..+
T Consensus 313 L~~l 316 (334)
T 2pvf_A 313 LDRI 316 (334)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 173
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.5e-33 Score=303.12 Aligned_cols=265 Identities=17% Similarity=0.195 Sum_probs=202.9
Q ss_pred cccHHHHHHhhcCCCCC-CcccccCCccEEEEEEcCCceEEEEEEeccccc--hhhHHHHHHHHHHhcC-CCCccceeee
Q 041249 259 NLSYQNLHNATDGFSSA-NLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--RASRSFIAECRALRSI-RHRNLVKVFT 334 (789)
Q Consensus 259 ~~~~~~~~~~~~~f~~~-~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~ 334 (789)
.+.|+..+.-.+.|... +.||+|+||.||+|....+++.||+|+++.... .....+.+|++++.++ .||||+++++
T Consensus 17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 34444445555667766 889999999999999998999999999875432 3357889999999999 5699999999
Q ss_pred eeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCC
Q 041249 335 ACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPS 414 (789)
Q Consensus 335 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~ 414 (789)
++.... ..++||||+.+|+|.+++... ....+++.++..++.|++.||+|||+.+ |+||||||+
T Consensus 97 ~~~~~~-----~~~lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~ 160 (327)
T 3lm5_A 97 VYENTS-----EIILILEYAAGGEIFSLCLPE--------LAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQ 160 (327)
T ss_dssp EEECSS-----EEEEEEECCTTEEGGGGGSSC--------C-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGG
T ss_pred EEEeCC-----eEEEEEEecCCCcHHHHHHHh--------cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChH
Confidence 997665 799999999999999998643 3456899999999999999999999998 999999999
Q ss_pred ceecCC---CCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccc
Q 041249 415 NILLDE---EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMF 491 (789)
Q Consensus 415 Nill~~---~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~ 491 (789)
||+++. ++.+||+|||+++....... .....||+.|+|||.+....++.++||||||+++|||++|+.||....
T Consensus 161 NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 237 (327)
T 3lm5_A 161 NILLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237 (327)
T ss_dssp GEEESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEEecCCCCCcEEEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999998 78999999999998754432 223569999999999999999999999999999999999999996321
Q ss_pred cCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 492 EGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.. ..+... ...... .. ......+...+.+++..|.+.++..||+...+..+
T Consensus 238 ~~-~~~~~i-~~~~~~-~~--------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 238 NQ-ETYLNI-SQVNVD-YS--------------------------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HH-HHHHHH-HHTCCC-CC--------------------------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ch-HHHHHH-Hhcccc-cC--------------------------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 11 001111 110000 00 00011233446678889999999999998877543
No 174
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.4e-34 Score=312.18 Aligned_cols=270 Identities=20% Similarity=0.274 Sum_probs=207.0
Q ss_pred HHHHhhcCCCCCCcccccCCccEEEEEEcCCc-----eEEEEEEeccccc-hhhHHHHHHHHHHhcC-CCCccceeeeee
Q 041249 264 NLHNATDGFSSANLIGTGSFGSVYKGVLDEGR-----TTVTVKVFNLHHH-RASRSFIAECRALRSI-RHRNLVKVFTAC 336 (789)
Q Consensus 264 ~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 336 (789)
+.+...++|...+.||+|+||.||+|.+..++ +.||+|.+..... ...+.+.+|+++++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 44556788999999999999999999987554 4799999975533 3456799999999999 899999999999
Q ss_pred ccCCCCCCceEEEEeeccCCCChhhhccCCCCCc----cccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCC
Q 041249 337 SGVDYQGNDFKALVYEFMQNGSLEEWLYPVNRED----EVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLK 412 (789)
Q Consensus 337 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~----~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk 412 (789)
.... ..++||||+.+|+|.+++....... ........+++..+..++.|++.||+|||+.+ |+|||||
T Consensus 120 ~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlk 191 (333)
T 2i1m_A 120 THGG-----PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVA 191 (333)
T ss_dssp CSSS-----SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCS
T ss_pred ecCC-----ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcc
Confidence 7665 7899999999999999986431000 00011346899999999999999999999998 9999999
Q ss_pred CCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccc
Q 041249 413 PSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMF 491 (789)
Q Consensus 413 ~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~ 491 (789)
|+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 192 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 271 (333)
T 2i1m_A 192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 271 (333)
T ss_dssp GGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred cceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc
Confidence 9999999999999999999987655443333334557889999999988899999999999999999999 999997432
Q ss_pred cCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 492 EGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.. ..+............ ...+...+.+++..|++.++..||+...+...
T Consensus 272 ~~-~~~~~~~~~~~~~~~------------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 320 (333)
T 2i1m_A 272 VN-SKFYKLVKDGYQMAQ------------------------------PAFAPKNIYSIMQACWALEPTHRPTFQQICSF 320 (333)
T ss_dssp SS-HHHHHHHHHTCCCCC------------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hh-HHHHHHHhcCCCCCC------------------------------CCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 21 112222222211100 01123345678889999999999999877543
Q ss_pred c
Q 041249 572 L 572 (789)
Q Consensus 572 l 572 (789)
+
T Consensus 321 L 321 (333)
T 2i1m_A 321 L 321 (333)
T ss_dssp H
T ss_pred H
Confidence 3
No 175
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.9e-34 Score=303.02 Aligned_cols=256 Identities=21% Similarity=0.216 Sum_probs=185.7
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
..++|...+.||+|+||+||+|.+..+++.||+|+++.... ...+.+.++...++.++||||+++++++....
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~----- 79 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG----- 79 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC-----
Confidence 45788999999999999999999988999999999975532 22344555666688889999999999998655
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC-CCCCceecCCCCCceecCCCCce
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD-CQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+. |++.+++... ......+++..+..++.|++.||+|||+. + ++||||||+||+++.++.+
T Consensus 80 ~~~lv~e~~~-~~l~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~ 149 (290)
T 3fme_A 80 DVWICMELMD-TSLDKFYKQV------IDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQV 149 (290)
T ss_dssp SEEEEEECCS-EEHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCE
T ss_pred CEEEEEehhc-cchHHHHHHH------HhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCE
Confidence 7899999998 5887776431 12345789999999999999999999997 7 9999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccC----CCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHH
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYG----LGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNF 500 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~ 500 (789)
||+|||.++....... .....||..|+|||.+ ....++.++||||||+++|||++|+.||+........+...
T Consensus 150 kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 226 (290)
T 3fme_A 150 KMCDFGISGYLVDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226 (290)
T ss_dssp EBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH
T ss_pred EEeecCCccccccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH
Confidence 9999999987655432 2234689999999995 55678999999999999999999999997432211112221
Q ss_pred HHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 501 ARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 501 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.....+. .. ...+...+.+++..|++.++.+||+...+..+
T Consensus 227 ~~~~~~~---------~~---------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 227 VEEPSPQ---------LP---------------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HHSCCCC---------CC---------------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred hccCCCC---------cc---------------------cccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 1111110 00 00123345678889999999999999877553
No 176
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.4e-33 Score=313.26 Aligned_cols=202 Identities=22% Similarity=0.259 Sum_probs=168.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc--cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCC-CCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDY-QGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 345 (789)
.++|...+.||+|+||+||+|....+++.||||++... .....+.+.+|+++++.++||||+++++++..... ....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46888999999999999999999989999999999654 33445778899999999999999999999875532 2334
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.++ +.+.+. ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+|
T Consensus 141 ~~~lv~E~~~~~-l~~~~~------------~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~k 204 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 204 (464)
T ss_dssp EEEEEEECCSEE-HHHHHT------------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeCCCCC-HHHHHh------------hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEE
Confidence 689999999864 555553 23789999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|+|||+++...... ......||..|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 205 l~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g 265 (464)
T 3ttj_A 205 ILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265 (464)
T ss_dssp ECCCCCC-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEEEeeeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999998765432 22345689999999999999999999999999999999999999963
No 177
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.2e-33 Score=308.80 Aligned_cols=286 Identities=19% Similarity=0.206 Sum_probs=206.1
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
.++|...+.||+|+||.||+|....+++.||||++.... ....+.+.+|++++.+++||||+++++++...........
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468899999999999999999999899999999997543 3334778999999999999999999999876654444578
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
++|+||+. |+|.+++.. ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 106 ~iv~e~~~-~~L~~~l~~-----------~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~ 170 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKT-----------QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKIC 170 (364)
T ss_dssp EEEEECCS-EEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEEC
T ss_pred EEEEcccC-cCHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEE
Confidence 99999998 589988853 35899999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCcc-ceeeecccccccCcccCCCC-CcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 428 DFGLARFLPPTHVQT-SSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 428 Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
|||.++......... ......||..|+|||.+.+. .++.++|||||||++|||++|+.||..... ......+....
T Consensus 171 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~ 248 (364)
T 3qyz_A 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY--LDQLNHILGIL 248 (364)
T ss_dssp CCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG--GGHHHHHHHHH
T ss_pred eCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh--HHHHHHHHHHh
Confidence 999998776443211 12345799999999986554 489999999999999999999999974321 11222211111
Q ss_pred CCchhhhccCCcccChhhHHHhhhhh-hhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQR-QRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
.....+.+..........+ ..+... ....+..........+.+++..|.+.++..|++...+..++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 315 (364)
T 3qyz_A 249 GSPSQEDLNCIINLKARNY-LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315 (364)
T ss_dssp CSCCHHHHHTCCCHHHHHH-HHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred CCCCHHHHHHhhhhhHHHH-HHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 1111111000000000000 000000 00000001112345567889999999999999998875543
No 178
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.4e-34 Score=306.79 Aligned_cols=266 Identities=18% Similarity=0.188 Sum_probs=203.7
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
..++|...+.||+|+||.||++....+++.||||++........+.+.+|++++++++||||+++++++.... ......
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~ 105 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEA 105 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCcee
Confidence 3467889999999999999999998899999999997666666788999999999999999999999986322 122367
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
++|+||+.+|+|.+++... ......+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 106 ~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~ 176 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERL------KDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLM 176 (317)
T ss_dssp EEEEECCTTCBHHHHHHHH------HTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHH------HhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEE
Confidence 9999999999999998642 123457899999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCc-------cceeeecccccccCcccCCCCC---cCccccchhhHHHHHHHHHhcCCCCccccCCccH
Q 041249 428 DFGLARFLPPTHVQ-------TSSIGVKGSIGYIAPEYGLGSE---VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNL 497 (789)
Q Consensus 428 Dfgla~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~ 497 (789)
|||.+......... .......||..|+|||.+.... +++++||||||+++|||++|+.||+.........
T Consensus 177 dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~ 256 (317)
T 2buj_A 177 DLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV 256 (317)
T ss_dssp CCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCH
T ss_pred ecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchh
Confidence 99998765432110 0111234789999999987543 7899999999999999999999997432222222
Q ss_pred HHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 498 HNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 498 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
.......... + ....+...+.+++..|++.++..||+...+...+.
T Consensus 257 ~~~~~~~~~~-------~-----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 257 ALAVQNQLSI-------P-----------------------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HHHHHCC--C-------C-----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hHHhhccCCC-------C-----------------------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 2222111000 0 00122345668888999999999999987755443
No 179
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.7e-33 Score=296.16 Aligned_cols=251 Identities=18% Similarity=0.188 Sum_probs=197.4
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc------hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCC
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH------RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 343 (789)
++|...+.||+|+||.||+|....+++.||+|+++.... ...+.+.+|++++++++||||+++++++....
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--- 81 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC---
Confidence 468888999999999999999998999999999865422 13577999999999999999999999997755
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC-
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM- 422 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~- 422 (789)
..++||||+.+++|.+++... ..+++.++..++.|++.||+|||+.+ ++||||||+||+++.++
T Consensus 82 --~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~ 146 (283)
T 3bhy_A 82 --DVVLILELVSGGELFDFLAEK----------ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNV 146 (283)
T ss_dssp --EEEEEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSS
T ss_pred --eEEEEEeecCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCC
Confidence 789999999999999998533 46899999999999999999999998 99999999999998877
Q ss_pred ---ceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHH
Q 041249 423 ---VSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHN 499 (789)
Q Consensus 423 ---~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~ 499 (789)
.+||+|||.+........ .....|+..|+|||.+....++.++||||||+++|||++|+.||.... ...
T Consensus 147 ~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~ 218 (283)
T 3bhy_A 147 PNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET-----KQE 218 (283)
T ss_dssp SSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHH
T ss_pred CCCceEEEecccceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc-----hHH
Confidence 899999999987654332 223468999999999998899999999999999999999999997321 111
Q ss_pred HHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 500 FARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 500 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
........ ..... ..........+.+++..|++.++..||+......
T Consensus 219 ~~~~~~~~------~~~~~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 219 TLTNISAV------NYDFD------------------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHHHHTT------CCCCC------------------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHhHhc------ccCCc------------------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 11111000 00000 0001122345668889999999999999887644
No 180
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.7e-33 Score=296.34 Aligned_cols=246 Identities=21% Similarity=0.272 Sum_probs=199.6
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
++|...+.||+|+||.||+|....+++.||+|++.... ......+.+|++++++++||||+++++++.... .
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 88 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK-----R 88 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----E
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC-----E
Confidence 67888999999999999999999899999999986442 233467899999999999999999999987655 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl 155 (284)
T 2vgo_A 89 IYLMLEFAPRGELYKELQKH----------GRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKI 155 (284)
T ss_dssp EEEEECCCTTEEHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEE
T ss_pred EEEEEEeCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEE
Confidence 89999999999999998643 45899999999999999999999988 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALP 506 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 506 (789)
+|||.+....... .....|+..|+|||.+.+..++.++||||||+++|||++|+.||.... .....+....
T Consensus 156 ~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~ 226 (284)
T 2vgo_A 156 ADFGWSVHAPSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS-----HTETHRRIVN 226 (284)
T ss_dssp CCCTTCEECSSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHT
T ss_pred ecccccccCcccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC-----HhHHHHHHhc
Confidence 9999987665432 223568999999999999999999999999999999999999997321 1111111110
Q ss_pred CchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 507 DHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 507 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
. +..+.. .....+.+++..|.+.++..|++......
T Consensus 227 ~------~~~~~~----------------------~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 227 V------DLKFPP----------------------FLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp T------CCCCCT----------------------TSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c------ccCCCC----------------------cCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 0 000100 11234557888999999999999887644
No 181
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.9e-33 Score=303.45 Aligned_cols=249 Identities=20% Similarity=0.233 Sum_probs=201.1
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
.++|...+.||+|+||.||++.+..+++.||+|++... .....+.+.+|++++++++||||+++++++....
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----- 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----
Confidence 35788899999999999999999989999999998644 2234567899999999999999999999998765
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+++|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~k 181 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKRR----------KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVK 181 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCCHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEE
Confidence 899999999999999988543 46899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
|+|||.++........ .....|+..|+|||.+.+..++.++||||||+++|||++|+.||.... ..+......
T Consensus 182 l~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~ 254 (335)
T 2owb_A 182 IGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----LKETYLRIK 254 (335)
T ss_dssp ECCCTTCEECCSTTCC--BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHH
T ss_pred EeeccCceecccCccc--ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC-----HHHHHHHHh
Confidence 9999999877543321 233568999999999988889999999999999999999999997321 111111000
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
.. ...+. ..+...+.+++..|++.++.+|++......
T Consensus 255 ~~------~~~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 255 KN------EYSIP----------------------KHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HT------CCCCC----------------------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cC------CCCCC----------------------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 00000 011234557788999999999999987754
No 182
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5e-34 Score=300.65 Aligned_cols=253 Identities=22% Similarity=0.244 Sum_probs=194.3
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
++|...+.||+|+||+||+|....+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~ 96 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH-----NMY 96 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC-----eEE
Confidence 57888999999999999999999899999999987554 334578999999999999999999999997665 789
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec---CCCCcee
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVSH 425 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill---~~~~~~k 425 (789)
+||||+.+|+|.+++... ......+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+|
T Consensus 97 lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~k 167 (285)
T 3is5_A 97 IVMETCEGGELLERIVSA------QARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIK 167 (285)
T ss_dssp EEECCCSCCBHHHHHHHH------HHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEE
T ss_pred EEEEeCCCCcHHHHHHhh------hhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEE
Confidence 999999999999988532 112356899999999999999999999998 9999999999999 4567899
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
|+|||.++....... .....||..|+|||.+. +.++.++||||||+++|||++|+.||..... ...........
T Consensus 168 l~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~--~~~~~~~~~~~ 241 (285)
T 3is5_A 168 IIDFGLAELFKSDEH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL--EEVQQKATYKE 241 (285)
T ss_dssp ECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC
T ss_pred EEeeecceecCCccc---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH--HHHHhhhccCC
Confidence 999999987654332 23456899999999875 5789999999999999999999999973211 11111111110
Q ss_pred CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 506 PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 506 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
+ ..... .......+.+++..|.+.++.+||+..++..
T Consensus 242 ~---------~~~~~-------------------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 242 P---------NYAVE-------------------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C---------CCCC---------------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred c---------ccccc-------------------cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00000 0011234557888999999999999887644
No 183
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.3e-33 Score=300.51 Aligned_cols=251 Identities=21% Similarity=0.222 Sum_probs=197.8
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKAL 349 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 349 (789)
++|...+.||+|+||+||+|....+++.||+|+++.........+.+|++++++++||||+++++++.... ..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 83 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT-----HYYL 83 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEEE
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC-----EEEE
Confidence 57888999999999999999999899999999998665555677899999999999999999999987665 8899
Q ss_pred EeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec---CCCCceee
Q 041249 350 VYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVSHV 426 (789)
Q Consensus 350 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl 426 (789)
||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ ++||||||+||++ +.++.+||
T Consensus 84 v~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl 150 (304)
T 2jam_A 84 VMQLVSGGELFDRILER----------GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMI 150 (304)
T ss_dssp EECCCCSCBHHHHHHHH----------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEB
T ss_pred EEEcCCCccHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEE
Confidence 99999999999988543 45889999999999999999999998 9999999999999 78899999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALP 506 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 506 (789)
+|||.++...... .....|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ..+...+.....
T Consensus 151 ~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~ 224 (304)
T 2jam_A 151 TDFGLSKMEQNGI----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SKLFEKIKEGYY 224 (304)
T ss_dssp CSCSTTCCCCCBT----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHCCC
T ss_pred ccCCcceecCCCc----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcCCC
Confidence 9999998654332 2234589999999999999999999999999999999999999963211 111111111100
Q ss_pred CchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 507 DHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 507 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
. . +... .......+.+++..|.+.++..|++......+
T Consensus 225 ~----~-~~~~----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 225 E----F-ESPF----------------------WDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp C----C-CTTT----------------------TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred C----C-Cccc----------------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0 0 0000 01123345678889999999999999876543
No 184
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=7.8e-34 Score=296.45 Aligned_cols=252 Identities=20% Similarity=0.296 Sum_probs=195.5
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||+||+|.+. ++.||||+++... ....+.+.+|++++++++||||+++++++.... ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP---APH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT---SSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC---CCC
Confidence 357888999999999999999985 8899999997553 334567999999999999999999999987652 236
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+.+|+|.+++... ....+++.++..++.|++.||+|||+.+ ++++||||||+||+++.++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l 154 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEG--------TNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARI 154 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSC--------SSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEE
T ss_pred eEeeecccCCCcHHHHHhhc--------ccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeE
Confidence 79999999999999999754 2336899999999999999999999764 45999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCc---cccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVST---NGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
+|||.+...... ...||..|+|||.+.+..++. ++||||||+++|||++|+.||..... ......
T Consensus 155 ~~~~~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~ 222 (271)
T 3kmu_A 155 SMADVKFSFQSP-------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN-----MEIGMK 222 (271)
T ss_dssp EGGGSCCTTSCT-------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH-----HHHHHH
T ss_pred Eeccceeeeccc-------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh-----HHHHHH
Confidence 988887654332 245889999999988765444 89999999999999999999973211 111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
.... ...+.+. ..+...+.+++..|++.++..||+...+...+
T Consensus 223 ~~~~----~~~~~~~----------------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L 265 (271)
T 3kmu_A 223 VALE----GLRPTIP----------------------PGISPHVSKLMKICMNEDPAKRPKFDMIVPIL 265 (271)
T ss_dssp HHHS----CCCCCCC----------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHhc----CCCCCCC----------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1000 0001110 12234566788899999999999988765433
No 185
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-33 Score=299.72 Aligned_cols=202 Identities=21% Similarity=0.259 Sum_probs=166.4
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc---hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
-++|...+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++....
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----- 107 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG----- 107 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC-----
Confidence 3688999999999999999999998999999999975432 23477899999999999999999999987765
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++|+||+.+++|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~k 174 (309)
T 2h34_A 108 QLYVDMRLINGVDLAAMLRRQ----------GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAY 174 (309)
T ss_dssp EEEEEEECCCCEEHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEE
T ss_pred eEEEEEEecCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEE
Confidence 889999999999999998643 45899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|+|||++......... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 175 l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 237 (309)
T 2h34_A 175 LVDFGIASATTDEKLT-QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG 237 (309)
T ss_dssp ECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCS
T ss_pred EecCccCccccccccc-cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCC
Confidence 9999999876544321 12245689999999999999999999999999999999999999973
No 186
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=9.7e-35 Score=318.91 Aligned_cols=254 Identities=15% Similarity=0.109 Sum_probs=188.7
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHH---HHHhcCCCCccceeeeeec----
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAEC---RALRSIRHRNLVKVFTACS---- 337 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~l~~~~~---- 337 (789)
..++|...+.||+|+||+||+|++..+++.||||++... .....+.+.+|+ +.+++++||||+++++.+.
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 356788899999999999999999888999999999743 334567889999 5566668999999985443
Q ss_pred ---cCCC-------CCCc-----eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCC
Q 041249 338 ---GVDY-------QGND-----FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDC 402 (789)
Q Consensus 338 ---~~~~-------~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~ 402 (789)
.... .... ..++||||+ +|+|.+++.... ........+++..+..|+.|++.||+|||+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~---~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLL---SHSSTHKSLVHHARLQLTLQVIRLLASLHHYG 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHH---HTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhcc---ccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 2210 0000 278999999 589999997531 11112334556889999999999999999998
Q ss_pred CCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCC-----------CcCccccch
Q 041249 403 QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS-----------EVSTNGDVY 471 (789)
Q Consensus 403 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~k~DV~ 471 (789)
|+||||||+|||++.++.+||+|||+++.... ......| ..|+|||++... .++.++|||
T Consensus 227 ---ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dvw 297 (377)
T 3byv_A 227 ---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAW 297 (377)
T ss_dssp ---EECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHH
T ss_pred ---eecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHH
Confidence 99999999999999999999999999986432 2234557 999999999877 899999999
Q ss_pred hhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhc
Q 041249 472 SYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIG 551 (789)
Q Consensus 472 sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 551 (789)
||||++|||++|+.||....... ....+.. .. ..+...+.+++
T Consensus 298 SlG~il~elltg~~Pf~~~~~~~-------------~~~~~~~-~~-----------------------~~~~~~~~~li 340 (377)
T 3byv_A 298 ALGLVIYWIWCADLPITKDAALG-------------GSEWIFR-SC-----------------------KNIPQPVRALL 340 (377)
T ss_dssp HHHHHHHHHHHSSCCC------C-------------CSGGGGS-SC-----------------------CCCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCccccccc-------------chhhhhh-hc-----------------------cCCCHHHHHHH
Confidence 99999999999999996321110 0001110 00 12234566788
Q ss_pred cccceeeEeccCcccccccc
Q 041249 552 SKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 552 ~~c~~l~~l~l~s~~~~~~~ 571 (789)
..|++.++..|++...+..+
T Consensus 341 ~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 341 EGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHTCSSGGGCCCHHHHHTS
T ss_pred HHHcCCCchhCCCHHHHhhC
Confidence 89999999999998877543
No 187
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-34 Score=310.99 Aligned_cols=255 Identities=22% Similarity=0.331 Sum_probs=187.2
Q ss_pred CCCCCCcccccCCccEEEEEEcCC---ceEEEEEEeccc-cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 271 GFSSANLIGTGSFGSVYKGVLDEG---RTTVTVKVFNLH-HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 271 ~f~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.|...+.||+|+||+||+|.+..+ ...||||.++.. .....+.+.+|++++++++||||++++++|...+ ..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE----GS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCS----SC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC----CC
Confidence 355668899999999999998533 346899998654 3345678999999999999999999999875432 25
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL 233 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNE---------THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKV 233 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCT---------TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEE
T ss_pred eEEEEECCCCCCHHHHHhhc---------ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEE
Confidence 78999999999999999643 345789999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCc--cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHH
Q 041249 427 GDFGLARFLPPTHVQ--TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 503 (789)
+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+..
T Consensus 234 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~--~~~~~~~~~ 311 (373)
T 3c1x_A 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLLQ 311 (373)
T ss_dssp CCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS--SCHHHHHHT
T ss_pred eeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH--HHHHHHHHc
Confidence 999999876544321 12234457789999999998999999999999999999999 6777753211 122222211
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
.... . ....+...+.+++..|++.++.+||+.......+.
T Consensus 312 ~~~~-----~-------------------------~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 312 GRRL-----L-------------------------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp TCCC-----C-------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC-----C-------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1000 0 00123345668888999999999999988754443
No 188
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3e-33 Score=297.43 Aligned_cols=251 Identities=23% Similarity=0.292 Sum_probs=203.4
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
.+.|...+.||+|+||.||+|....+++.||||++.... ....+.+.+|++++++++||||+++++++.... ..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 95 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT-----KL 95 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-----eE
Confidence 356888999999999999999998899999999997553 344578999999999999999999999988765 78
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
++||||+.+++|.+++.. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+
T Consensus 96 ~lv~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~ 161 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLEP-----------GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLA 161 (303)
T ss_dssp EEEEECCTTEEHHHHHTT-----------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCCcHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEe
Confidence 999999999999999853 35899999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCC
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPD 507 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 507 (789)
|||.+........ ......|+..|+|||.+....++.++||||||+++|||++|+.||..... ......+....
T Consensus 162 Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~-- 235 (303)
T 3a7i_A 162 DFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--MKVLFLIPKNN-- 235 (303)
T ss_dssp CCTTCEECBTTBC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSC--
T ss_pred ecccceecCcccc--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--HHHHHHhhcCC--
Confidence 9999987654331 12345689999999999999999999999999999999999999973211 11111111111
Q ss_pred chhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 508 HVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 508 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
.+.+.. .+...+.+++..|++.++..||+...+...+
T Consensus 236 ------~~~~~~----------------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 236 ------PPTLEG----------------------NYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp ------CCCCCS----------------------SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ------CCCCcc----------------------ccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 111111 1233466788899999999999998876544
No 189
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-33 Score=298.47 Aligned_cols=255 Identities=21% Similarity=0.318 Sum_probs=197.0
Q ss_pred CCCCCCcccccCCccEEEEEEcCCce---EEEEEEeccccc-hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 271 GFSSANLIGTGSFGSVYKGVLDEGRT---TVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 271 ~f~~~~~ig~G~~g~Vy~~~~~~~~~---~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.|...+.||+|+||+||+|.+..+++ .||+|.+..... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE----GL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS----SC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC----CC
Confidence 34556899999999999999754443 799999875433 34578899999999999999999999987544 23
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++|+||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||++++++.+||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl 165 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSP---------QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKV 165 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCT---------TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEecccCCCHHHHHhcc---------ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEe
Confidence 48999999999999999643 356789999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCC--CccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHh
Q 041249 427 GDFGLARFLPPTH--VQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504 (789)
Q Consensus 427 ~Dfgla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 504 (789)
+|||.++...... .........++..|+|||.+.+..++.++||||||+++|||++|..|+.... +...+...+...
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~ 244 (298)
T 3pls_A 166 ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFDLTHFLAQG 244 (298)
T ss_dssp CCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CGGGHHHHHHTT
T ss_pred CcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CHHHHHHHhhcC
Confidence 9999998765443 1122234567889999999999999999999999999999999766654221 112222222221
Q ss_pred CCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 505 LPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 505 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
..... ...+...+.+++..|++.++.+||+.......+
T Consensus 245 ~~~~~------------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l 282 (298)
T 3pls_A 245 RRLPQ------------------------------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEV 282 (298)
T ss_dssp CCCCC------------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCC------------------------------CccchHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 11100 012233566788899999999999988775443
No 190
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.3e-34 Score=301.37 Aligned_cols=255 Identities=20% Similarity=0.289 Sum_probs=189.3
Q ss_pred HhhcCCCCCCcccccCCccEEEEEEcCC---ceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCC
Q 041249 267 NATDGFSSANLIGTGSFGSVYKGVLDEG---RTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQ 342 (789)
Q Consensus 267 ~~~~~f~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 342 (789)
...++|...+.||+|+||.||+|.+..+ +..||+|.++... ....+.+.+|+..+++++||||+++++++.+ .
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~-- 88 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N-- 88 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-S--
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-C--
Confidence 4456788899999999999999998643 5679999987543 3345679999999999999999999999743 2
Q ss_pred CCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC
Q 041249 343 GNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM 422 (789)
Q Consensus 343 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~ 422 (789)
..++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||+++.++
T Consensus 89 ---~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~ 153 (281)
T 1mp8_A 89 ---PVWIIMELCTLGELRSFLQVR---------KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSND 153 (281)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHT---------TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETT
T ss_pred ---ccEEEEecCCCCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCC
Confidence 578999999999999998643 246899999999999999999999998 99999999999999999
Q ss_pred ceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHH
Q 041249 423 VSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFA 501 (789)
Q Consensus 423 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~ 501 (789)
.+||+|||+++........ ......+++.|+|||.+....++.++||||||+++|||++ |+.||...... .....+
T Consensus 154 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i 230 (281)
T 1mp8_A 154 CVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI 230 (281)
T ss_dssp EEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHH
T ss_pred CEEECccccccccCccccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHH
Confidence 9999999999877544321 1223446788999999988889999999999999999997 99999743221 222222
Q ss_pred HHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 502 RMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 502 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
...... .. ...+...+.+++..|++.++..||+.......+
T Consensus 231 ~~~~~~--------~~----------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 271 (281)
T 1mp8_A 231 ENGERL--------PM----------------------PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 271 (281)
T ss_dssp HTTCCC--------CC----------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HcCCCC--------CC----------------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 111000 00 012334566888899999999999988765443
No 191
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.8e-33 Score=328.40 Aligned_cols=202 Identities=22% Similarity=0.293 Sum_probs=178.2
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCC
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 343 (789)
..++|...+.||+|+||.||+|....+++.||||+++.. .......+..|.+++..+ +||+|+++++++...+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--- 415 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 415 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS---
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC---
Confidence 456899999999999999999999999999999999743 334456788899999988 7999999999987765
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV 423 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~ 423 (789)
..++||||+.+|+|.+++... ..+++.++..|+.||+.||+|||+.+ ||||||||+|||++.+++
T Consensus 416 --~~~lV~E~~~gg~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ 480 (674)
T 3pfq_A 416 --RLYFVMEYVNGGDLMYHIQQV----------GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGH 480 (674)
T ss_dssp --EEEEEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSC
T ss_pred --EEEEEEeCcCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCc
Confidence 899999999999999999643 46899999999999999999999998 999999999999999999
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
+||+|||+++....... ......||+.|+|||++....++.++|||||||++|||++|+.||..
T Consensus 481 ikL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~ 544 (674)
T 3pfq_A 481 IKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544 (674)
T ss_dssp EEECCCTTCEECCCTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEeecceeeccccCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC
Confidence 99999999986543332 23346799999999999999999999999999999999999999973
No 192
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.2e-33 Score=296.26 Aligned_cols=199 Identities=25% Similarity=0.372 Sum_probs=168.3
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
++|...+.||+|+||+||+|.. .+++.||+|.++.... .....+.+|++++++++||||+++++++.... ..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-----RL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS-----CE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC-----eE
Confidence 4678889999999999999998 4789999999865432 23467889999999999999999999997765 78
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
++||||+.+ +|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~ 142 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDVC---------EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIA 142 (288)
T ss_dssp EEEEECCSE-EHHHHHHTS---------TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEecCC-CHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEe
Confidence 999999985 898888643 246889999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCC-CcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|||.++....... ......||..|+|||.+.+. .++.++|||||||++|||++|+.||..
T Consensus 143 Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (288)
T 1ob3_A 143 DFGLARAFGIPVR--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203 (288)
T ss_dssp CTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ECccccccCcccc--ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999987643321 12234689999999998764 589999999999999999999999974
No 193
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.7e-33 Score=307.40 Aligned_cols=214 Identities=22% Similarity=0.229 Sum_probs=174.8
Q ss_pred cccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccch-----------hhHHHHHHHHHHhcCCCC
Q 041249 259 NLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-----------ASRSFIAECRALRSIRHR 327 (789)
Q Consensus 259 ~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~ 327 (789)
+..+.++....++|...+.||+|+||.||+|... .++.||||++...... ..+.+.+|++++++++||
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 89 (362)
T 3pg1_A 11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89 (362)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCc
Confidence 4456788889999999999999999999999987 5899999998543221 136799999999999999
Q ss_pred ccceeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCce
Q 041249 328 NLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITT 407 (789)
Q Consensus 328 niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iv 407 (789)
||+++++++...........++||||+. |++.+++... ...+++..+..++.|++.||+|||+.+ |+
T Consensus 90 ~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~~---iv 156 (362)
T 3pg1_A 90 NILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---------RIVISPQHIQYFMYHILLGLHVLHEAG---VV 156 (362)
T ss_dssp TBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT---------TSCCCHHHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred CccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHHCc---CE
Confidence 9999999986654344447899999999 6888887543 346899999999999999999999998 99
Q ss_pred ecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCC
Q 041249 408 HCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKP 486 (789)
Q Consensus 408 H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P 486 (789)
||||||+||+++.++.+||+|||.++....... .....||..|+|||.+.+ ..++.++|||||||++|||++|+.|
T Consensus 157 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p 233 (362)
T 3pg1_A 157 HRDLHPGNILLADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233 (362)
T ss_dssp CCCCCGGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ecCCChHHEEEcCCCCEEEEecCcccccccccc---cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCC
Confidence 999999999999999999999999986544332 234568899999999877 6789999999999999999999999
Q ss_pred CCc
Q 041249 487 SDI 489 (789)
Q Consensus 487 ~~~ 489 (789)
|..
T Consensus 234 f~~ 236 (362)
T 3pg1_A 234 FRG 236 (362)
T ss_dssp CCC
T ss_pred CCC
Confidence 974
No 194
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.2e-33 Score=304.55 Aligned_cols=268 Identities=19% Similarity=0.218 Sum_probs=198.1
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
++|...+.||+|+||.||+|....+++.||||++..... ...+.+.+|++++++++||||+++++++.... ..
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 99 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK-----RW 99 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC-----EE
Confidence 578888999999999999999998999999999864432 23566889999999999999999999998765 88
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
++||||+.++++.++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 100 ~lv~e~~~~~~l~~~~~~~----------~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~ 166 (331)
T 4aaa_A 100 YLVFEFVDHTILDDLELFP----------NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLC 166 (331)
T ss_dssp EEEEECCSEEHHHHHHHST----------TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEEC
T ss_pred EEEEecCCcchHHHHHhhc----------cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEE
Confidence 9999999999998886533 45899999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCC-CcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCC
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALP 506 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 506 (789)
|||.++....... ......|+..|+|||.+.+. .++.++|||||||++|||++|+.||...... ..+.........
T Consensus 167 Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~ 243 (331)
T 4aaa_A 167 DFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-DQLYHIMMCLGN 243 (331)
T ss_dssp CCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCS
T ss_pred eCCCceeecCCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCC
Confidence 9999987654332 12235689999999998775 6899999999999999999999999743211 111111111000
Q ss_pred --Cch----------hhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 507 --DHV----------MDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 507 --~~~----------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
... .....+.+..... .......+...+.+++..|++.++..||+..++..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 244 LIPRHQELFNKNPVFAGVRLPEIKEREP-------------LERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CCHHHHHHHHHCGGGTTCCCCCCSSCCC-------------HHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CChhhhhHhhhccccccccCccccccch-------------hhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 0000111100000 000111345567788999999999999999887554
No 195
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.3e-34 Score=306.27 Aligned_cols=279 Identities=20% Similarity=0.244 Sum_probs=195.3
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccch-hhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-ASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
++|...+.||+|+||+||+|....+++.||+|+++..... ....+.+|++++++++||||+++++++.... ..+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-----SLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS-----CEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC-----EEE
Confidence 4688889999999999999999989999999998654322 2234567999999999999999999987665 789
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCc
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGD 428 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 428 (789)
+||||+. |+|.+++... +..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 77 lv~e~~~-~~l~~~~~~~---------~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~D 143 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDC---------GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLAD 143 (324)
T ss_dssp EEEECCS-EEHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECS
T ss_pred EEecccc-cCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEcc
Confidence 9999998 5898888643 346899999999999999999999998 99999999999999999999999
Q ss_pred ccccccCCCCCCccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCC
Q 041249 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPD 507 (789)
Q Consensus 429 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 507 (789)
||.++....... ......||..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ......+......
T Consensus 144 fg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~ 219 (324)
T 3mtl_A 144 FGLARAKSIPTK--TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV--EEQLHFIFRILGT 219 (324)
T ss_dssp SSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCC
T ss_pred CcccccccCCcc--ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCC
Confidence 999987654321 1223468999999999876 5689999999999999999999999974321 1222222222111
Q ss_pred chhhhccCCcccChhhHHHhhhhh-hhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 508 HVMDIVDSTLLNDVEDLAIISNQR-QRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 508 ~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
...+.++...... .+....... ...............+.+++..|.+.++..|++..++..++
T Consensus 220 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 283 (324)
T 3mtl_A 220 PTEETWPGILSNE--EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP 283 (324)
T ss_dssp CCTTTSTTGGGCH--HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred CChHhchhhhcch--hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence 1111111000000 000000000 00000001112344567889999999999999998876543
No 196
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=328.43 Aligned_cols=246 Identities=22% Similarity=0.325 Sum_probs=192.3
Q ss_pred cccccCCccEEEEEEc--CCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEEEeec
Q 041249 277 LIGTGSFGSVYKGVLD--EGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVYEF 353 (789)
Q Consensus 277 ~ig~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 353 (789)
.||+|+||.||+|.+. .++..||||+++... ....+.+.+|++++++++||||++++++|.. + ..++||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~-----~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E-----ALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S-----SEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C-----CeEEEEEe
Confidence 7999999999999886 356789999997653 3456789999999999999999999999864 2 58999999
Q ss_pred cCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCcccccc
Q 041249 354 MQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLAR 433 (789)
Q Consensus 354 ~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 433 (789)
+.+|+|.+++... ...+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 417 ~~~g~L~~~l~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~ 484 (613)
T 2ozo_A 417 AGGGPLHKFLVGK---------REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSK 484 (613)
T ss_dssp CTTCBHHHHHTTC---------TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTT
T ss_pred CCCCcHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcc
Confidence 9999999999643 356899999999999999999999998 9999999999999999999999999999
Q ss_pred cCCCCCCc-cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHHhCCCchhh
Q 041249 434 FLPPTHVQ-TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARMALPDHVMD 511 (789)
Q Consensus 434 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (789)
........ .......++..|+|||++....++.++|||||||++|||++ |+.||..... ..+...+......
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~i~~~~~~---- 558 (613)
T 2ozo_A 485 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQGKRM---- 558 (613)
T ss_dssp TCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HHHHHHHHTTCCC----
T ss_pred cccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHcCCCC----
Confidence 87544321 11223345689999999988899999999999999999998 9999974321 1122222111100
Q ss_pred hccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 512 IVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 512 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
.....|...+.+++..|++.++.+||+...+...+
T Consensus 559 --------------------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L 593 (613)
T 2ozo_A 559 --------------------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 593 (613)
T ss_dssp --------------------------CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHH
T ss_pred --------------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 01113455677899999999999999998775443
No 197
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.4e-34 Score=314.94 Aligned_cols=279 Identities=19% Similarity=0.233 Sum_probs=206.1
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
+.|...+.||+|+||+||+|.+..+++.||||+++... ....+.+.+|++++++++||||+++++++.... ....+
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---~~~~~ 85 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHKV 85 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC---CCeeE
Confidence 56888899999999999999999899999999997543 233567889999999999999999999987543 23679
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec----CCCCce
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL----DEEMVS 424 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill----~~~~~~ 424 (789)
+||||+.+|+|.+++... .....+++.++..++.|++.||+|||+.+ |+||||||+||++ +.++.+
T Consensus 86 lv~e~~~~g~L~~~l~~~-------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~ 155 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEP-------SNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVY 155 (396)
T ss_dssp EEECCCTTEEHHHHTTSG-------GGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEE
T ss_pred EEEecCCCCCHHHHHHhh-------hcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeE
Confidence 999999999999999754 12234899999999999999999999998 9999999999999 788889
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCC--------CCcCccccchhhHHHHHHHHHhcCCCCccccCCcc
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG--------SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMN 496 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~ 496 (789)
||+|||+++....... .....||..|+|||.+.. ..++.++|||||||++|||++|+.||.........
T Consensus 156 kL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 232 (396)
T 4eut_A 156 KLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232 (396)
T ss_dssp EECCGGGCEECCCGGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC
T ss_pred EEecCCCceEccCCCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch
Confidence 9999999987755432 223569999999998764 56889999999999999999999999754332222
Q ss_pred HHHHHH--HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 497 LHNFAR--MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 497 ~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
.....+ ...+......+.....+... |... ..............+.++...|.+.+|..|++......
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~~---~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 233 KEVMYKIITGKPSGAISGVQKAENGPID---WSGD---MPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp HHHHHHHHHSCCTTCCEEEECSTTCCEE---EESS---CCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred HHHHHHHhcCCCcccchhheeccCCCcc---cCcc---CCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence 222221 11221111111100000000 0000 00001112345567778889999999999999887633
No 198
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.7e-33 Score=304.25 Aligned_cols=254 Identities=19% Similarity=0.230 Sum_probs=196.7
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCCceE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
.++|...+.||+|+||.||+|....+++.||||+++.... ...+|++++.++ +||||+++++++.... ..
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~-----~~ 91 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGK-----YV 91 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSS-----EE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCC-----EE
Confidence 4678899999999999999999998999999999965432 245688888888 7999999999997765 89
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC----Cc
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE----MV 423 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~----~~ 423 (789)
++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||++.++ +.
T Consensus 92 ~lv~E~~~gg~L~~~i~~~----------~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~ 158 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILRQ----------KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPES 158 (342)
T ss_dssp EEEECCCCSCBHHHHHHTC----------TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGG
T ss_pred EEEEeCCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCe
Confidence 9999999999999998644 46899999999999999999999998 9999999999998543 35
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
+||+|||+++....... ......||..|+|||.+.+..++.++|||||||++|||++|+.||..... .........
T Consensus 159 ~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~~ 234 (342)
T 2qr7_A 159 IRICDFGFAKQLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILAR 234 (342)
T ss_dssp EEECCCTTCEECBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHHH
T ss_pred EEEEECCCcccCcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHHH
Confidence 99999999987654432 12235689999999999888899999999999999999999999974321 122222211
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
...... .. .... .......+.+++..|.+.++..|++...+..++
T Consensus 235 i~~~~~-~~-~~~~----------------------~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 235 IGSGKF-SL-SGGY----------------------WNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp HHHCCC-CC-CSTT----------------------TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred HccCCc-cc-Cccc----------------------cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 100000 00 0000 001233455788899999999999988775543
No 199
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=5.8e-34 Score=306.45 Aligned_cols=263 Identities=21% Similarity=0.314 Sum_probs=197.9
Q ss_pred hhcCCCCCCcccccCCccEEEEEE-----cCCceEEEEEEeccc-cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCC
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVL-----DEGRTTVTVKVFNLH-HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDY 341 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 341 (789)
..++|...+.||+|+||.||+|.+ ..+++.||||++... .......+.+|++++++++||||+++++++....
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 106 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL- 106 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC-
Confidence 346899999999999999999994 456789999999644 3344567899999999999999999999987655
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecC--
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD-- 419 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~-- 419 (789)
..++||||+.+|+|.+++..... .......+++.++..++.|++.||.|||+.+ |+||||||+||+++
T Consensus 107 ----~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~ 176 (327)
T 2yfx_A 107 ----PRFILMELMAGGDLKSFLRETRP---RPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 176 (327)
T ss_dssp ----SCEEEEECCTTEEHHHHHHHTSC---CSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCS
T ss_pred ----CcEEEEecCCCCcHHHHHHhhcc---cccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecC
Confidence 67999999999999999975411 1123356899999999999999999999998 99999999999998
Q ss_pred -CCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccH
Q 041249 420 -EEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNL 497 (789)
Q Consensus 420 -~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~ 497 (789)
++..+||+|||.+................|+..|+|||.+....++.++||||||+++|||++ |+.||.... ....
T Consensus 177 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~ 254 (327)
T 2yfx_A 177 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--NQEV 254 (327)
T ss_dssp STTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHH
T ss_pred CCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC--HHHH
Confidence 455799999999986544432222334557889999999988899999999999999999998 999986321 1111
Q ss_pred HHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 498 HNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 498 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
...+...... .. ...+...+.+++..|++.++.+||+...+...+.
T Consensus 255 ~~~~~~~~~~--------~~----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 255 LEFVTSGGRM--------DP----------------------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HHHHHTTCCC--------CC----------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhcCCCC--------CC----------------------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1111111000 00 0123345668888999999999999988755444
No 200
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.6e-33 Score=301.66 Aligned_cols=268 Identities=20% Similarity=0.239 Sum_probs=201.6
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCC-CCccceeeeeeccCCCCCCceE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR-HRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~ 347 (789)
.++|...+.||+|+||+||+|....+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.... ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~---~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPV---SRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---TCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCC---CCce
Confidence 36788999999999999999999889999999998633 3467899999999997 999999999987632 2368
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC-ceee
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM-VSHV 426 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl 426 (789)
++||||+.+++|.+++. .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++ .+||
T Consensus 109 ~lv~e~~~~~~l~~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl 172 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ-------------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRL 172 (330)
T ss_dssp EEEEECCCCCCHHHHGG-------------GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEE
T ss_pred EEEEeccCchhHHHHHH-------------hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEE
Confidence 99999999999999873 3688999999999999999999998 99999999999999776 8999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
+|||+++....... .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.........+....+..-
T Consensus 173 ~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~ 249 (330)
T 3nsz_A 173 IDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 249 (330)
T ss_dssp CCCTTCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHC
T ss_pred EeCCCceEcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcC
Confidence 99999987765442 223468899999999877 66899999999999999999999999643222112222111111
Q ss_pred CCc---------------hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 506 PDH---------------VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 506 ~~~---------------~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
... ..+.........+.+ .............+.+++..|.+.++..|++..++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 250 TEDLYDYIDKYNIELDPRFNDILGRHSRKRWER----------FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGG----------GCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CchhhhHHHHhccccccchhhhhhhccccchhh----------hccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111 111111111111100 0001111123456778899999999999999987755
Q ss_pred c
Q 041249 571 I 571 (789)
Q Consensus 571 ~ 571 (789)
+
T Consensus 320 h 320 (330)
T 3nsz_A 320 H 320 (330)
T ss_dssp S
T ss_pred C
Confidence 4
No 201
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.2e-33 Score=297.14 Aligned_cols=260 Identities=18% Similarity=0.269 Sum_probs=198.9
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
..++|...+.||+|+||+||+|.+..+++.||||++.... ....+.+|+++++.++|++++..++.+.... ...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~----~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEG----DYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEET----TEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCC----Cce
Confidence 3578999999999999999999998899999999875443 2345888999999999999888887774432 378
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec---CCCCce
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVS 424 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill---~~~~~~ 424 (789)
++||||+ +|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||++ ++++.+
T Consensus 81 ~lv~e~~-~~~L~~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~ 147 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFC---------SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLV 147 (296)
T ss_dssp EEEEECC-CCBHHHHHHHT---------TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCE
T ss_pred EEEEEcc-CCCHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeE
Confidence 9999999 89999998632 346899999999999999999999998 9999999999999 788999
Q ss_pred eeCcccccccCCCCCCc-----cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccC--CccH
Q 041249 425 HVGDFGLARFLPPTHVQ-----TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG--DMNL 497 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~--~~~~ 497 (789)
||+|||.++........ .......||..|+|||.+.+..++.++|||||||++|||++|+.||...... ...+
T Consensus 148 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 227 (296)
T 4hgt_A 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 227 (296)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH
T ss_pred EEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhh
Confidence 99999999987654321 1223456999999999999999999999999999999999999999753221 1112
Q ss_pred HHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 498 HNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 498 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
........+..... ....+...+.+++..|++.++.+||+...+...+.
T Consensus 228 ~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 228 ERISEKKMSTPIEV---------------------------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHHHHHHHSCHHH---------------------------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred hhhhcccccchhhh---------------------------hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 22211111100000 00122345678889999999999999887755443
No 202
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-33 Score=300.97 Aligned_cols=259 Identities=20% Similarity=0.275 Sum_probs=192.2
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc---cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH---HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
++|...+.||+|+||.||+|....+++.||+|+++.. .......+.+|++++++++||||+++++++.... .
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~ 106 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN-----E 106 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----E
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----c
Confidence 5788899999999999999999889999999998753 2334567899999999999999999999998765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+.+|+|.+++... ......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl 177 (310)
T 2wqm_A 107 LNIVLELADAGDLSRMIKHF------KKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKL 177 (310)
T ss_dssp EEEEEECCCSCBHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCCHHHHHHHh------cccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEE
Confidence 99999999999999998532 112456899999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALP 506 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 506 (789)
+|||++........ ......|+..|+|||.+....++.++||||||+++|||++|+.||.... .....+.+....
T Consensus 178 ~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~ 252 (310)
T 2wqm_A 178 GDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEQ 252 (310)
T ss_dssp CCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC------CCHHHHHHHHHT
T ss_pred EeccceeeecCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc---hhHHHHHHHhhc
Confidence 99999987654332 1223468999999999999999999999999999999999999996322 122222221111
Q ss_pred CchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 507 DHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 507 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
..... .. ...+...+.+++..|++.++..||+...+...+.
T Consensus 253 ~~~~~-----~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 253 CDYPP-----LP---------------------SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp TCSCC-----CC---------------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccCCC-----Cc---------------------ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 00000 00 0122345667888999999999999987754443
No 203
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.1e-33 Score=304.64 Aligned_cols=201 Identities=25% Similarity=0.398 Sum_probs=165.5
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
..++|...+.||+|+||+||+|....+++.||||+++.... .....+.+|++++++++||||+++++++....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 106 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH----- 106 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT-----
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC-----
Confidence 45689999999999999999999998999999999965532 23456789999999999999999999998766
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec-----CC
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL-----DE 420 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill-----~~ 420 (789)
..++||||+. |+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.
T Consensus 107 ~~~lv~e~~~-~~L~~~~~~~----------~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~ 172 (329)
T 3gbz_A 107 RLHLIFEYAE-NDLKKYMDKN----------PDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASE 172 (329)
T ss_dssp EEEEEEECCS-EEHHHHHHHC----------TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----
T ss_pred EEEEEEecCC-CCHHHHHhhc----------CCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCc
Confidence 8999999998 5999998644 45899999999999999999999998 9999999999999 45
Q ss_pred CCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCC-cCccccchhhHHHHHHHHHhcCCCCc
Q 041249 421 EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 421 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
++.+||+|||.++....... ......||..|+|||.+.+.. ++.++|||||||++|||++|+.||..
T Consensus 173 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 240 (329)
T 3gbz_A 173 TPVLKIGDFGLARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPG 240 (329)
T ss_dssp CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cceEEECcCCCccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 56799999999987653321 123345799999999988754 89999999999999999999999974
No 204
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=7.5e-34 Score=298.20 Aligned_cols=262 Identities=21% Similarity=0.254 Sum_probs=201.0
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||.||+|....+++.||+|.+.... ....+.+.+|++++++++||||+++++++.... ...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT---NTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG---GTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC---Cce
Confidence 467888999999999999999999899999999997543 334567999999999999999999999875422 237
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCC--CCCceecCCCCCceecCCCCce
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDC--QPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~--~~~ivH~dlk~~Nill~~~~~~ 424 (789)
.++||||+++|+|.+++... ......+++..+..++.|++.||+|||+.+ ..+++||||||+||+++.++.+
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~ 155 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKG------TKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNV 155 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCE
T ss_pred EEEEEeCCCCCCHHHHHHhh------cccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCE
Confidence 89999999999999998643 112345899999999999999999999876 3449999999999999999999
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHh
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 504 (789)
||+|||.++....... ......|+..|+|||.+....++.++||||||+++|||++|+.||..... ..+...+...
T Consensus 156 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~~ 231 (279)
T 2w5a_A 156 KLGDFGLARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKIREG 231 (279)
T ss_dssp EECCCCHHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT
T ss_pred EEecCchheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHHhhc
Confidence 9999999987654431 12234589999999999888999999999999999999999999974311 1111111111
Q ss_pred CCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 505 LPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 505 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
... .+. ..+...+.+++..|++.++.+||+...+...+.
T Consensus 232 ~~~--------~~~----------------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 232 KFR--------RIP----------------------YRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCC--------CCC----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ccc--------cCC----------------------cccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 100 000 122345668888999999999999988765443
No 205
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-33 Score=304.72 Aligned_cols=255 Identities=24% Similarity=0.380 Sum_probs=192.4
Q ss_pred cCCCCCCcccccCCccEEEEEEcCC----ceEEEEEEeccccc-hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEG----RTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
++|...+.||+|+||+||+|.+..+ +..||||+++.... .....+.+|++++++++||||+++++++....
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 119 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK---- 119 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC----
Confidence 4666778999999999999998644 34699999975533 34567899999999999999999999987655
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 120 -~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~ 186 (333)
T 1mqb_A 120 -PMMIITEYMENGALDKFLREK---------DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVC 186 (333)
T ss_dssp -SEEEEEECCTTEEHHHHHHHT---------TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCE
T ss_pred -CcEEEEeCCCCCcHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcE
Confidence 789999999999999998643 346899999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCCc-cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHH
Q 041249 425 HVGDFGLARFLPPTHVQ-TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFAR 502 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 502 (789)
||+|||.++........ .......++..|+|||.+....++.++||||||+++|||++ |+.||..... ..+...+.
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~~~~ 264 (333)
T 1mqb_A 187 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEVMKAIN 264 (333)
T ss_dssp EECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHH
T ss_pred EECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHH
Confidence 99999999887654321 12223446788999999988899999999999999999999 9999963211 11111111
Q ss_pred HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 503 MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 503 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
..... . ....+...+.+++..|++.++..||+...+...+.
T Consensus 265 ~~~~~--------~----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 265 DGFRL--------P----------------------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp TTCCC--------C----------------------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCcC--------C----------------------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11000 0 00123345668889999999999999887755544
No 206
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.5e-33 Score=300.70 Aligned_cols=269 Identities=23% Similarity=0.304 Sum_probs=206.8
Q ss_pred HHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhc--CCCCccceeeeeeccCCCCC
Q 041249 266 HNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRS--IRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 266 ~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~~~~ 343 (789)
....++|...+.||+|+||.||+|.+. ++.||||+++.. ....+..|++++.. ++||||+++++++..... .
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~-~ 111 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG-T 111 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS-S
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC-c
Confidence 344578999999999999999999984 899999998533 34567788888877 789999999999876531 1
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhh--------cCCCCCceecCCCCCc
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLH--------HDCQPITTHCDLKPSN 415 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~ivH~dlk~~N 415 (789)
....++||||+.+|+|.+++.. ..+++.++..++.|++.||+||| ..+ |+||||||+|
T Consensus 112 ~~~~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~N 177 (342)
T 1b6c_B 112 WTQLWLVSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKN 177 (342)
T ss_dssp CCCEEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGG
T ss_pred cceeEEEEeecCCCcHHHHHhc-----------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHH
Confidence 1268999999999999999953 25899999999999999999999 666 9999999999
Q ss_pred eecCCCCceeeCcccccccCCCCCCcc--ceeeecccccccCcccCCCC------CcCccccchhhHHHHHHHHHh----
Q 041249 416 ILLDEEMVSHVGDFGLARFLPPTHVQT--SSIGVKGSIGYIAPEYGLGS------EVSTNGDVYSYGILMLELIIR---- 483 (789)
Q Consensus 416 ill~~~~~~kl~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~sfGvvl~elltG---- 483 (789)
|+++.++++||+|||++.......... ......||..|+|||.+... .++.++|||||||++|||++|
T Consensus 178 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~ 257 (342)
T 1b6c_B 178 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 257 (342)
T ss_dssp EEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred EEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcC
Confidence 999999999999999998765543211 12345699999999998765 345799999999999999999
Q ss_pred ------cCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhcccccee
Q 041249 484 ------KKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKV 557 (789)
Q Consensus 484 ------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l 557 (789)
+.||............+.+...... ..+.+.. .+...++...+.+++..|++.
T Consensus 258 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----------------~~~~~~~~~~l~~li~~cl~~ 316 (342)
T 1b6c_B 258 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK----LRPNIPN-----------------RWQSCEALRVMAKIMRECWYA 316 (342)
T ss_dssp TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCG-----------------GGGTSHHHHHHHHHHHHHCCS
T ss_pred CcccccccCccccCcCcccHHHHHHHHHHHH----hCCCCcc-----------------cccchhHHHHHHHHHHHHhcc
Confidence 6777654444444444444332211 1111111 111235667788999999999
Q ss_pred eEeccCcccccccccccc
Q 041249 558 TILDLESLKLAGSILPHI 575 (789)
Q Consensus 558 ~~l~l~s~~~~~~~l~~l 575 (789)
++.+||+...+...+..+
T Consensus 317 dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 317 NGAARLTALRIKKTLSQL 334 (342)
T ss_dssp SGGGSCCHHHHHHHHHHH
T ss_pred ChhhCCCHHHHHHHHHHH
Confidence 999999998886655544
No 207
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.7e-32 Score=299.05 Aligned_cols=137 Identities=18% Similarity=0.114 Sum_probs=104.1
Q ss_pred CCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEE
Q 041249 19 NLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETL 98 (789)
Q Consensus 19 ~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 98 (789)
.++++++|++++|.++..-+..|..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..|..|+.+++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46788888888888884444446788888888888888887667788888888888888888886667778888888888
Q ss_pred eccCCCCCCcCCccccCCcccccccccCCCCCccceeecCCcccCCCchhhhcCcccccEEecccCCCCC
Q 041249 99 TVSGNILQGEIPSTLGSCIKLEILEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEG 168 (789)
Q Consensus 99 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~l~~l~ls~N~l~~~~p~~~~~~~~l~~l~ls~N~~~~ 168 (789)
+|++|++++..+..|.++++|++|++++ |.+++..|..+..+++|+.|++++|++++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~-------------n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSN-------------NNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCS-------------SCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCC-------------CccCccChhhccCCCCCCEEECCCCcCCc
Confidence 8888888843344457777666555544 44555567778888888888888887764
No 208
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=9.5e-34 Score=301.04 Aligned_cols=271 Identities=24% Similarity=0.316 Sum_probs=200.0
Q ss_pred cCCCCCCcccccCCccEEEEEE----cCCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 270 DGFSSANLIGTGSFGSVYKGVL----DEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
+.|...+.||+|+||.||+|.+ ..+++.||+|+++... ......+.+|++++++++||||+++++++.... .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG---G 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC---C
Confidence 3477788999999999999994 5678999999997543 334578999999999999999999999987642 2
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
...++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~ 165 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKN---------KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQV 165 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHH---------TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEE
T ss_pred ceEEEEEEeCCCCcHHHHHHhc---------cccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCE
Confidence 2679999999999999998533 245899999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCCc-cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 425 HVGDFGLARFLPPTHVQ-TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
||+|||.+......... .......||..|+|||.+.+..++.++||||||+++|||++|+.|+.... ..+.+.
T Consensus 166 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~ 239 (302)
T 4e5w_A 166 KIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM------ALFLKM 239 (302)
T ss_dssp EECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH------HHHHHH
T ss_pred EECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh------hHHhhc
Confidence 99999999987655422 22334568888999999998899999999999999999999999975321 111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
..+...... ... .........+......+...+.+++..|++.++.+||+...+...+
T Consensus 240 ~~~~~~~~~--------~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 297 (302)
T 4e5w_A 240 IGPTHGQMT--------VTR---LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGF 297 (302)
T ss_dssp HCSCCGGGH--------HHH---HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred cCCcccccC--------HHH---HHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 111000000 000 0000000000001123345677889999999999999998775433
No 209
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.4e-33 Score=296.92 Aligned_cols=259 Identities=18% Similarity=0.269 Sum_probs=202.3
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.++|...+.||+|+||.||+|....+++.||||++.... ..+.+.+|+++++.++|+++++.++.+.... ...+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~----~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEG----DYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEET----TEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCC----CceE
Confidence 568999999999999999999998899999999986543 2356899999999999999888877764432 3679
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecC---CCCcee
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD---EEMVSH 425 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~---~~~~~k 425 (789)
+||||+ +++|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++ +++.+|
T Consensus 82 lv~e~~-~~~L~~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~k 148 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFC---------SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVY 148 (296)
T ss_dssp EEEECC-CCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEE
T ss_pred EEEEec-CCCHHHHHHhh---------ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEE
Confidence 999999 89999998632 246899999999999999999999998 99999999999994 888999
Q ss_pred eCcccccccCCCCCCc-----cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccC--CccHH
Q 041249 426 VGDFGLARFLPPTHVQ-----TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG--DMNLH 498 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~--~~~~~ 498 (789)
|+|||.++........ .......||..|+|||.+.+..++.++|||||||++|||++|+.||...... ...+.
T Consensus 149 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 228 (296)
T 3uzp_A 149 IIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE 228 (296)
T ss_dssp ECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHH
T ss_pred EeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhh
Confidence 9999999987654421 1123456999999999999999999999999999999999999999753221 11222
Q ss_pred HHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 499 NFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 499 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
............. ....+...+.+++..|++.++.+||+...+...+.
T Consensus 229 ~~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 229 RISEKKMSTPIEV---------------------------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHHHHHHSCHHH---------------------------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred hhcccccCCchHH---------------------------HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 2221111100000 00123445678889999999999999887755443
No 210
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.9e-34 Score=301.67 Aligned_cols=256 Identities=21% Similarity=0.294 Sum_probs=197.8
Q ss_pred HhhcCCCCCC-cccccCCccEEEEEE--cCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCC
Q 041249 267 NATDGFSSAN-LIGTGSFGSVYKGVL--DEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDY 341 (789)
Q Consensus 267 ~~~~~f~~~~-~ig~G~~g~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 341 (789)
...++|...+ .||+|+||+||+|.+ ..+++.||||+++... ....+.+.+|++++++++||||+++++++.. .
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~- 90 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-E- 90 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S-
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C-
Confidence 3445677777 999999999999965 4567899999997543 2335789999999999999999999999832 2
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE 421 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~ 421 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ ++||||||+||+++.+
T Consensus 91 ----~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~ 153 (291)
T 1xbb_A 91 ----SWMLVMEMAELGPLNKYLQQN----------RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQ 153 (291)
T ss_dssp ----SEEEEEECCTTEEHHHHHHHC----------TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEET
T ss_pred ----CcEEEEEeCCCCCHHHHHHhC----------cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCC
Confidence 579999999999999999643 45899999999999999999999998 9999999999999999
Q ss_pred CceeeCcccccccCCCCCCcc-ceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHH
Q 041249 422 MVSHVGDFGLARFLPPTHVQT-SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHN 499 (789)
Q Consensus 422 ~~~kl~Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~ 499 (789)
+.+||+|||++.......... ......++..|+|||.+....++.++||||||+++|||++ |+.||..... .....
T Consensus 154 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~ 231 (291)
T 1xbb_A 154 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTA 231 (291)
T ss_dssp TEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHH
T ss_pred CcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHH
Confidence 999999999998876554321 1223346788999999988889999999999999999999 9999974211 11111
Q ss_pred HHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 500 FARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 500 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
.+..... +.. ...+...+.+++..|++.++.+||+...+...+.
T Consensus 232 ~~~~~~~--------~~~----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 232 MLEKGER--------MGC----------------------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp HHHTTCC--------CCC----------------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred HHHcCCC--------CCC----------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111100 000 0123345668889999999999999887754433
No 211
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=9.4e-34 Score=309.10 Aligned_cols=199 Identities=24% Similarity=0.349 Sum_probs=175.3
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
.++|...+.||+|+||+||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT-----EE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC-----EE
Confidence 467888999999999999999999899999999997653 334577999999999999999999999998765 79
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC-CCCCceecCCCCCceecCCCCceee
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD-CQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||
T Consensus 107 ~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl 173 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKA----------GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKL 173 (360)
T ss_dssp EEEECCCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEE
T ss_pred EEEEECCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEE
Confidence 9999999999999999643 4588999999999999999999985 7 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
+|||++....... .....||..|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 174 ~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 174 CDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp CCCCCCHHHHHHC--------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred EECCCCccccccc----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999987553221 2235689999999999999999999999999999999999999974
No 212
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1e-33 Score=300.74 Aligned_cols=272 Identities=21% Similarity=0.253 Sum_probs=184.8
Q ss_pred HHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 266 HNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 266 ~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
....++|...+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 86 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD---- 86 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS----
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC----
Confidence 345678999999999999999999998889999999986543 334567889999999999999999999998765
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
..++||||+.+|+|.+++...... .......+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+
T Consensus 87 -~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~ 160 (303)
T 2vwi_A 87 -ELWLVMKLLSGGSVLDIIKHIVAK--GEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSV 160 (303)
T ss_dssp -CEEEEEECCTTCBHHHHHHHHHHT--TTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCE
T ss_pred -CcEEEehhccCCchHHHHHHHhhc--cccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCE
Confidence 789999999999999998631000 0112356899999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCC---ccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHH
Q 041249 425 HVGDFGLARFLPPTHV---QTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNF 500 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~ 500 (789)
||+|||.+........ ........||..|+|||.+.. ..++.++||||||+++|||++|+.||...... .....
T Consensus 161 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~ 238 (303)
T 2vwi_A 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--KVLML 238 (303)
T ss_dssp EECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--GHHHH
T ss_pred EEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--hHHHH
Confidence 9999999987754431 112233568999999999876 46899999999999999999999999743221 11111
Q ss_pred HHHhCCCchh-hhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 501 ARMALPDHVM-DIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 501 ~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.....+.... ...++... ..+...+.+++..|++.++..||+...+..+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 239 TLQNDPPSLETGVQDKEML----------------------KKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp HHTSSCCCTTC-----CCC----------------------CCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhccCCCccccccccchhh----------------------hhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1111111110 01111111 1223456678889999999999999887554
No 213
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.1e-33 Score=306.12 Aligned_cols=258 Identities=21% Similarity=0.224 Sum_probs=197.3
Q ss_pred HHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-chhhHHHHHHHHH-HhcCCCCccceeeeeeccCCCCC
Q 041249 266 HNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRA-LRSIRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 266 ~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~ 343 (789)
....++|...+.||+|+||.||+|.+..+++.||||+++... ......+..|+.. ++.++||||+++++++....
T Consensus 47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~--- 123 (340)
T 3an0_A 47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--- 123 (340)
T ss_dssp CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS---
T ss_pred EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC---
Confidence 345678889999999999999999998899999999997553 2334455556655 77789999999999997765
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC-CCCCceecCCCCCceecCCCC
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD-CQPITTHCDLKPSNILLDEEM 422 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivH~dlk~~Nill~~~~ 422 (789)
..++||||+.+ +|.+++... ......+++..+..++.|++.||+|||+. + |+||||||+||+++.++
T Consensus 124 --~~~lv~e~~~~-~L~~~l~~~------~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~ 191 (340)
T 3an0_A 124 --DVWICMELMDT-SLDKFYKQV------IDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALG 191 (340)
T ss_dssp --CEEEEECCCSE-EHHHHHHHH------HHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTT
T ss_pred --cEEEEHHHhhC-cHHHHHHHH------HhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCC
Confidence 78999999985 898887531 11245789999999999999999999986 7 99999999999999999
Q ss_pred ceeeCcccccccCCCCCCccceeeecccccccCcccCC----CCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHH
Q 041249 423 VSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL----GSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLH 498 (789)
Q Consensus 423 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~ 498 (789)
.+||+|||+++...... ......||..|+|||.+. ...++.++|||||||++|||++|+.||+........+.
T Consensus 192 ~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~ 268 (340)
T 3an0_A 192 QVKMCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK 268 (340)
T ss_dssp CEEECCCSHHHHHSCHH---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH
T ss_pred CEEEeeCCCceeccccc---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHH
Confidence 99999999998764322 122346899999999964 34789999999999999999999999974221111111
Q ss_pred HHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 499 NFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 499 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
...... .+... ...+...+.+++..|++.++..||+...+...
T Consensus 269 ~~~~~~---------~~~~~---------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 269 QVVEEP---------SPQLP---------------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp HHHHSC---------CCCCC---------------------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHhcCC---------CCCCC---------------------cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111110 00000 01233456688889999999999998877543
No 214
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.98 E-value=1.2e-33 Score=297.07 Aligned_cols=255 Identities=20% Similarity=0.285 Sum_probs=197.6
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcC---CceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCC
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDE---GRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 343 (789)
..++|...+.||+|+||+||+|.+.. ++..||+|.+.... ....+.+.+|++++++++||||+++++++...
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 85 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE---- 85 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS----
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC----
Confidence 45788899999999999999999753 24569999987553 34467899999999999999999999997643
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV 423 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~ 423 (789)
..++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.
T Consensus 86 --~~~~v~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~ 151 (281)
T 3cc6_A 86 --PTWIIMELYPYGELGHYLERN---------KNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPEC 151 (281)
T ss_dssp --SCEEEEECCTTCBHHHHHHHH---------TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTE
T ss_pred --CCEEEEecCCCCCHHHHHHhc---------cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCc
Confidence 468999999999999998643 345899999999999999999999998 999999999999999999
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHH
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFAR 502 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 502 (789)
+||+|||.+......... ......++..|+|||......++.++||||||+++|||++ |+.||..... ......+.
T Consensus 152 ~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~~~~~ 228 (281)
T 3cc6_A 152 VKLGDFGLSRYIEDEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVLE 228 (281)
T ss_dssp EEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHHHHHH
T ss_pred EEeCccCCCccccccccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHHHHHh
Confidence 999999999877554321 1223457889999999988889999999999999999998 9999963322 12222222
Q ss_pred HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 503 MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 503 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
....... ...+...+.+++..|++.++..||+.......+.
T Consensus 229 ~~~~~~~------------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 229 KGDRLPK------------------------------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp HTCCCCC------------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCCCCC------------------------------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 1111000 0112344667888999999999999987754443
No 215
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.98 E-value=2.5e-33 Score=302.43 Aligned_cols=264 Identities=19% Similarity=0.180 Sum_probs=187.2
Q ss_pred HHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCC-CCccceeeeeeccCCC---
Q 041249 266 HNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR-HRNLVKVFTACSGVDY--- 341 (789)
Q Consensus 266 ~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~--- 341 (789)
+....+|...+.||+|+||.||+|.+..+++.||||++........+.+.+|+..+.++. ||||+++++++.....
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred eccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 344568889999999999999999999899999999987666666778999999999996 9999999999853321
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE 421 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~ 421 (789)
......++|+||+. |+|.+++... .....+++.++..++.|++.||+|||+.+ ++|+||||||+||+++.+
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~ 174 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKM-------ESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQ 174 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHH-------HTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTT
T ss_pred cCCceEEEEEEecC-CCHHHHHHHh-------hccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCC
Confidence 23446899999997 7999888542 12346899999999999999999999774 359999999999999999
Q ss_pred CceeeCcccccccCCCCCCcc----------ceeeecccccccCcccC---CCCCcCccccchhhHHHHHHHHHhcCCCC
Q 041249 422 MVSHVGDFGLARFLPPTHVQT----------SSIGVKGSIGYIAPEYG---LGSEVSTNGDVYSYGILMLELIIRKKPSD 488 (789)
Q Consensus 422 ~~~kl~Dfgla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~k~DV~sfGvvl~elltG~~P~~ 488 (789)
+.+||+|||+++......... ......||..|+|||.+ .+..++.++|||||||++|||++|+.||.
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 254 (337)
T 3ll6_A 175 GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254 (337)
T ss_dssp SCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred CCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence 999999999999876543211 11134589999999998 56678999999999999999999999996
Q ss_pred ccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccc
Q 041249 489 IMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLA 568 (789)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~ 568 (789)
.... ............ . ..+...+.+++..|++.++.+|++..++
T Consensus 255 ~~~~-----~~~~~~~~~~~~--------~----------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~ 299 (337)
T 3ll6_A 255 DGAK-----LRIVNGKYSIPP--------H----------------------DTQYTVFHSLIRAMLQVNPEERLSIAEV 299 (337)
T ss_dssp ----------------CCCCT--------T----------------------CCSSGGGHHHHHHHSCSSGGGSCCHHHH
T ss_pred chhH-----HHhhcCcccCCc--------c----------------------cccchHHHHHHHHHccCChhhCcCHHHH
Confidence 3211 111111110000 0 0111224467888999999999998877
Q ss_pred ccccc
Q 041249 569 GSILP 573 (789)
Q Consensus 569 ~~~l~ 573 (789)
...+.
T Consensus 300 l~~l~ 304 (337)
T 3ll6_A 300 VHQLQ 304 (337)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 216
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.98 E-value=3.3e-34 Score=328.53 Aligned_cols=261 Identities=26% Similarity=0.416 Sum_probs=204.6
Q ss_pred HHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCC
Q 041249 262 YQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDY 341 (789)
Q Consensus 262 ~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 341 (789)
..+++...++|...+.||+|+||+||+|.+. ++..||||+++... ...+.+.+|++++++++|+||+++++++.. .
T Consensus 259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~- 334 (535)
T 2h8h_A 259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E- 334 (535)
T ss_dssp TTCSBCCGGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-S-
T ss_pred ccceecchhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-c-
Confidence 3445556678888999999999999999997 45779999997544 235679999999999999999999999864 2
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE 421 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~ 421 (789)
..++||||+.+|+|.+++... ....+++.++..|+.||+.||+|||+.+ ||||||||+|||++++
T Consensus 335 ----~~~lv~e~~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~ 399 (535)
T 2h8h_A 335 ----PIYIVTEYMSKGSLLDFLKGE--------TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGEN 399 (535)
T ss_dssp ----SCEEEECCCTTEEHHHHHSHH--------HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred ----cceEeeehhcCCcHHHHHhhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCC
Confidence 579999999999999999642 2245899999999999999999999998 9999999999999999
Q ss_pred CceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHH
Q 041249 422 MVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNF 500 (789)
Q Consensus 422 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~ 500 (789)
+.+||+|||+++....... .......++..|+|||.+..+.++.++|||||||++|||++ |+.||..... ..+...
T Consensus 400 ~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~~~~~ 476 (535)
T 2h8h_A 400 LVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQ 476 (535)
T ss_dssp GCEEECCTTSTTTCCCHHH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HHHHHH
T ss_pred CcEEEcccccceecCCCce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH
Confidence 9999999999987653221 11123446788999999988899999999999999999999 9999963211 011111
Q ss_pred HHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccccc
Q 041249 501 ARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPH 574 (789)
Q Consensus 501 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~ 574 (789)
+...... .....|...+.+++..|++.++.+||+...+...+..
T Consensus 477 i~~~~~~------------------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 520 (535)
T 2h8h_A 477 VERGYRM------------------------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520 (535)
T ss_dssp HHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHcCCCC------------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1111000 0011344566788999999999999999877554443
No 217
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.98 E-value=4.7e-33 Score=302.50 Aligned_cols=207 Identities=23% Similarity=0.346 Sum_probs=172.9
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCC---CCC
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDY---QGN 344 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---~~~ 344 (789)
++|...+.||+|+||+||+|....+++.||||++.... ......+.+|++++++++||||+++++++..... ...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 57888999999999999999998899999999986543 2335678899999999999999999999876431 112
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
...++||||+.+ ++.+.+... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~ 163 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNV---------LVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVL 163 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCT---------TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCE
T ss_pred ceEEEEEeccCC-CHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCE
Confidence 368999999985 777766533 345899999999999999999999998 9999999999999999999
Q ss_pred eeCcccccccCCCCCC--ccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 425 HVGDFGLARFLPPTHV--QTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
||+|||+++....... ........||..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 164 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 231 (351)
T 3mi9_A 164 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 231 (351)
T ss_dssp EECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred EEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999987764331 222334568999999998876 4589999999999999999999999974
No 218
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.98 E-value=1.2e-33 Score=294.65 Aligned_cols=253 Identities=25% Similarity=0.345 Sum_probs=199.3
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
..++|...+.||+|+||.||+|.+. +++.||+|++..... ..+.+.+|++++++++||||+++++++.... ..
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 78 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-----PI 78 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SC
T ss_pred chhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----Ce
Confidence 3467888899999999999999997 678899999975543 3467899999999999999999999987655 78
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
++||||+++|+|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~~~~L~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~ 146 (267)
T 3t9t_A 79 CLVTEFMEHGCLSDYLRTQ---------RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVS 146 (267)
T ss_dssp EEEECCCTTCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEEC
T ss_pred EEEEeCCCCCcHHHHHhhC---------cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEc
Confidence 9999999999999998643 246889999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHHhCC
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARMALP 506 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 506 (789)
|||.+........ .......++..|+|||.+....++.++||||||+++|||++ |+.||..... ......+.....
T Consensus 147 dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~i~~~~~ 223 (267)
T 3t9t_A 147 DFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTGFR 223 (267)
T ss_dssp CTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHTTCC
T ss_pred ccccccccccccc-cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--HHHHHHHhcCCc
Confidence 9999987654321 11123446788999999988889999999999999999999 8999873211 111111111100
Q ss_pred CchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 507 DHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 507 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
. .. ...+...+.+++..|++.++.+||+.......+
T Consensus 224 ~--------~~----------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L 259 (267)
T 3t9t_A 224 L--------YK----------------------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259 (267)
T ss_dssp C--------CC----------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred C--------CC----------------------CccCcHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 0 00 001233456788899999999999988765433
No 219
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.98 E-value=2.6e-33 Score=295.18 Aligned_cols=249 Identities=18% Similarity=0.204 Sum_probs=197.4
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc--cchhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 345 (789)
.++|...+.||+|+||+||+|.+..+++.||+|+++.. .......+.+|+..+.++ +||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~----- 84 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD----- 84 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT-----
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-----
Confidence 46788899999999999999999989999999998754 334457788999999999 9999999999997766
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC-----
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE----- 420 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~----- 420 (789)
..++||||+++|+|.+++... ......+++.++..++.|++.||+|||+.+ |+||||||+||+++.
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~ 155 (289)
T 1x8b_A 85 HMLIQNEYCNGGSLADAISEN------YRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPN 155 (289)
T ss_dssp EEEEEEECCTTCBHHHHHHHH------HHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC------
T ss_pred eEEEEEEecCCCcHHHHHHhh------cccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCc
Confidence 899999999999999999643 111246899999999999999999999998 999999999999984
Q ss_pred --------------CCceeeCcccccccCCCCCCccceeeecccccccCcccCCCC-CcCccccchhhHHHHHHHHHhcC
Q 041249 421 --------------EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKK 485 (789)
Q Consensus 421 --------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfGvvl~elltG~~ 485 (789)
...+||+|||.+....... ...||..|+|||.+.+. .+++++|||||||++|||++|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~ 229 (289)
T 1x8b_A 156 AASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEP 229 (289)
T ss_dssp --------------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccccccccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCC
Confidence 4588999999998876543 23489999999998776 57789999999999999999988
Q ss_pred CCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcc
Q 041249 486 PSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESL 565 (789)
Q Consensus 486 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~ 565 (789)
|+... .......+... +.+. ..+...+.+++..|++.++.+||+.
T Consensus 230 ~~~~~----~~~~~~~~~~~---------~~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~ 274 (289)
T 1x8b_A 230 LPRNG----DQWHEIRQGRL---------PRIP----------------------QVLSQEFTELLKVMIHPDPERRPSA 274 (289)
T ss_dssp CCSSS----HHHHHHHTTCC---------CCCS----------------------SCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCcch----hHHHHHHcCCC---------CCCC----------------------cccCHHHHHHHHHHhCCCcccCCCH
Confidence 76421 11111111000 0111 0123345678889999999999999
Q ss_pred ccccccc
Q 041249 566 KLAGSIL 572 (789)
Q Consensus 566 ~~~~~~l 572 (789)
.....++
T Consensus 275 ~~ll~h~ 281 (289)
T 1x8b_A 275 MALVKHS 281 (289)
T ss_dssp HHHHTCT
T ss_pred HHHhhCh
Confidence 8775543
No 220
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=3.5e-33 Score=304.97 Aligned_cols=201 Identities=24% Similarity=0.308 Sum_probs=167.3
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc--cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCC-CCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDY-QGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 345 (789)
.+.|...+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+++++.++||||+++++++..... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 36788899999999999999999989999999998543 23335678899999999999999999999876531 2223
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----------~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~k 168 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----------EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELK 168 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEE
T ss_pred eEEEEEecC-CCCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEE
Confidence 569999999 7899998853 35889999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|+|||+++...... ....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 169 l~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 228 (367)
T 1cm8_A 169 ILDFGLARQADSEM-----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228 (367)
T ss_dssp ECCCTTCEECCSSC-----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEeeeccccccccc-----CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999765432 23468999999999877 6799999999999999999999999973
No 221
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.98 E-value=8.6e-34 Score=297.81 Aligned_cols=258 Identities=23% Similarity=0.388 Sum_probs=201.4
Q ss_pred HHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCC
Q 041249 264 NLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQG 343 (789)
Q Consensus 264 ~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 343 (789)
+.+...++|...+.||+|+||.||+|.+. +++.||+|.++... ...+.+.+|++++++++||||+++++++...
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 80 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQE---- 80 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCC----
Confidence 33445578888999999999999999987 67889999986543 2356799999999999999999999997532
Q ss_pred CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc
Q 041249 344 NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV 423 (789)
Q Consensus 344 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~ 423 (789)
..++||||+.+|+|.+++... ....+++.++..++.|++.||+|||+.+ ++||||||+||++++++.
T Consensus 81 --~~~~v~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~ 147 (279)
T 1qpc_A 81 --PIYIITEYMENGSLVDFLKTP--------SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLS 147 (279)
T ss_dssp --SCEEEEECCTTCBHHHHTTSH--------HHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSC
T ss_pred --CcEEEEecCCCCCHHHHHhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCC
Confidence 478999999999999999643 1236899999999999999999999998 999999999999999999
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHH
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFAR 502 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 502 (789)
+||+|||.+......... ......++..|+|||.+..+.++.++||||||+++|||++ |+.||..... ......+.
T Consensus 148 ~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~ 224 (279)
T 1qpc_A 148 CKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLE 224 (279)
T ss_dssp EEECCCTTCEECSSSCEE-CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHH
T ss_pred EEECCCcccccccCcccc-cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--HHHHHHHh
Confidence 999999999887654311 1223446788999999988889999999999999999999 9999863211 11111111
Q ss_pred HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 503 MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 503 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
.... +.. ...+...+.+++..|++.++..||+.......+.
T Consensus 225 ~~~~--------~~~----------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 225 RGYR--------MVR----------------------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp TTCC--------CCC----------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccC--------CCC----------------------cccccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 1100 000 0123345668888999999999999887654443
No 222
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=2e-33 Score=296.34 Aligned_cols=254 Identities=22% Similarity=0.329 Sum_probs=199.2
Q ss_pred cCCCCCC-cccccCCccEEEEEEc--CCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 270 DGFSSAN-LIGTGSFGSVYKGVLD--EGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 270 ~~f~~~~-~ig~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
++|...+ .||+|+||.||+|.+. .+++.||||+++... ....+.+.+|++++++++||||+++++++.. .
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~----- 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E----- 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S-----
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C-----
Confidence 4555555 8999999999999864 457889999997653 3446779999999999999999999999843 2
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~k 150 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGK---------REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAK 150 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTC---------TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEE
T ss_pred CcEEEEEeCCCCCHHHHHHhC---------CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEE
Confidence 589999999999999998643 356899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCc-cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHH
Q 041249 426 VGDFGLARFLPPTHVQ-TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 503 (789)
|+|||.+......... .......+|..|+|||.+....++.++||||||+++|||++ |+.||..... ..+...+..
T Consensus 151 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i~~ 228 (287)
T 1u59_A 151 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQ 228 (287)
T ss_dssp ECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHHHT
T ss_pred ECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHhc
Confidence 9999999987654422 11223446889999999988889999999999999999998 9999974321 112222211
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
... +.. ...+...+.+++..|++.++..||+...+...+.
T Consensus 229 ~~~--------~~~----------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 229 GKR--------MEC----------------------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp TCC--------CCC----------------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCc--------CCC----------------------CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 100 000 0123445668889999999999999987754443
No 223
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.98 E-value=2.8e-33 Score=296.83 Aligned_cols=256 Identities=23% Similarity=0.329 Sum_probs=194.2
Q ss_pred cCCCCCCcccccCCccEEEEEEcCC---ceEEEEEEeccccc-hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEG---RTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
..|...+.||+|+||+||+|.+..+ ...||+|.+..... ...+.+.+|++++++++||||++++++|...+ .
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~ 100 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE----G 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS----S
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCC----C
Confidence 4677789999999999999997533 34689999875433 34577999999999999999999999975433 2
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+|
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~k 168 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNE---------THNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVK 168 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCT---------TCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEE
T ss_pred ceEEEEeCCCCCCHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEE
Confidence 678999999999999999643 356789999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCC--ccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHh-cCCCCccccCCccHHHHHH
Q 041249 426 VGDFGLARFLPPTHV--QTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIR-KKPSDIMFEGDMNLHNFAR 502 (789)
Q Consensus 426 l~Dfgla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG-~~P~~~~~~~~~~~~~~~~ 502 (789)
|+|||.++....... ........+|..|+|||.+.+..++.++||||||+++|||++| ..||... .. ........
T Consensus 169 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~~-~~~~~~~~ 246 (298)
T 3f66_A 169 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NT-FDITVYLL 246 (298)
T ss_dssp ECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS-CT-TTHHHHHH
T ss_pred ECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC-CH-HHHHHHHh
Confidence 999999987754432 1223345578899999999888999999999999999999995 5555422 11 11222111
Q ss_pred HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 503 MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 503 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
....... ...+...+.+++..|++.++.+||+.......+.
T Consensus 247 ~~~~~~~------------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 247 QGRRLLQ------------------------------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp TTCCCCC------------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCCCCC------------------------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1110000 0112334667888999999999999887754443
No 224
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.98 E-value=7.8e-33 Score=294.40 Aligned_cols=253 Identities=19% Similarity=0.282 Sum_probs=198.5
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc----chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH----HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
++|...+.||+|+||.||+|....+++.||+|+++... ......+.+|++++++++||||+++++++.... ..
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~ 81 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE---KQ 81 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC------
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---CC
Confidence 68999999999999999999999899999999996542 234578999999999999999999999985322 23
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+| +.+++... ....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+|
T Consensus 82 ~~~lv~e~~~~~-l~~~~~~~--------~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~k 149 (305)
T 2wtk_C 82 KMYMVMEYCVCG-MQEMLDSV--------PEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLK 149 (305)
T ss_dssp CEEEEEECCSEE-HHHHHHHS--------TTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEE
T ss_pred eEEEEehhccCC-HHHHHHhC--------cccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEE
Confidence 689999999977 66666433 2356899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCC--cCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSE--VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
|+|||.+................|+..|+|||...+.. ++.++||||||+++|||++|+.||... ........
T Consensus 150 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~ 224 (305)
T 2wtk_C 150 ISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-----NIYKLFEN 224 (305)
T ss_dssp ECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHH
T ss_pred eeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHH
Confidence 99999999876544333444566999999999987643 488999999999999999999999732 11111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
.... ...+. ..+...+.+++..|++.++..|++......
T Consensus 225 i~~~------~~~~~----------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 225 IGKG------SYAIP----------------------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp HHHC------CCCCC----------------------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HhcC------CCCCC----------------------CccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1000 00000 122344567888999999999999887644
No 225
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.98 E-value=3.3e-33 Score=317.28 Aligned_cols=252 Identities=22% Similarity=0.278 Sum_probs=201.0
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
.+.|...+.||+|+||.||+|....+++.||||++.... ......+.+|++++++++||||+++++++....
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG----- 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 357888999999999999999999999999999986442 344678999999999999999999999998765
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec---CCCC
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEM 422 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill---~~~~ 422 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||++ +.++
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~ 166 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIISR----------KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDA 166 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHTC----------SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTC
T ss_pred EEEEEEecCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCC
Confidence 899999999999999988644 56899999999999999999999998 9999999999999 5678
Q ss_pred ceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHH
Q 041249 423 VSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFAR 502 (789)
Q Consensus 423 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~ 502 (789)
.+||+|||+++....... .....||+.|+|||.+.+ .++.++|||||||++|+|++|+.||..... ......+.
T Consensus 167 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~ 240 (484)
T 3nyv_A 167 NIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILKKVE 240 (484)
T ss_dssp CEEECCTTHHHHBCCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH
T ss_pred cEEEEeeeeeEEcccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHH
Confidence 999999999987765432 223569999999998865 799999999999999999999999973211 11111111
Q ss_pred HhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 503 MALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 503 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.. .+.... .........+.+++..|.+.+|..|++......+
T Consensus 241 ~~-----------~~~~~~----------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 241 KG-----------KYTFEL----------------PQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp HC-----------CCCCCS----------------GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cC-----------CCCCCC----------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 11 000000 0001223455678889999999999999877554
No 226
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.98 E-value=4.7e-33 Score=303.85 Aligned_cols=256 Identities=20% Similarity=0.287 Sum_probs=200.7
Q ss_pred HHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--------hhhHHHHHHHHHHhcC-CCCccceeeee
Q 041249 265 LHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--------RASRSFIAECRALRSI-RHRNLVKVFTA 335 (789)
Q Consensus 265 ~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~l~~~ 335 (789)
.....++|...+.||+|+||.||+|.+..+++.||||+++.... ...+.+.+|++++.++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 34445789999999999999999999988899999999865431 1245688999999999 79999999999
Q ss_pred eccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCc
Q 041249 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSN 415 (789)
Q Consensus 336 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~N 415 (789)
+.... ..++||||+.+|+|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||||+|
T Consensus 169 ~~~~~-----~~~lv~e~~~g~~L~~~l~~~----------~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~N 230 (365)
T 2y7j_A 169 YESSS-----FMFLVFDLMRKGELFDYLTEK----------VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPEN 230 (365)
T ss_dssp EEBSS-----EEEEEECCCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGG
T ss_pred EeeCC-----EEEEEEEeCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHH
Confidence 87655 899999999999999998532 46899999999999999999999998 9999999999
Q ss_pred eecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCC------CCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 416 ILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG------SEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 416 ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|+++.++.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 231 Il~~~~~~ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 307 (365)
T 2y7j_A 231 ILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307 (365)
T ss_dssp EEECTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEECCCCCEEEEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence 9999999999999999987765432 234569999999998753 3589999999999999999999999963
Q ss_pred cccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccc
Q 041249 490 MFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAG 569 (789)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~ 569 (789)
... ......+.... ...... ....+...+.+++..|.+.++..|++...+.
T Consensus 308 ~~~--~~~~~~i~~~~-----------~~~~~~----------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell 358 (365)
T 2y7j_A 308 RRQ--ILMLRMIMEGQ-----------YQFSSP----------------EWDDRSSTVKDLISRLLQVDPEARLTAEQAL 358 (365)
T ss_dssp SSH--HHHHHHHHHTC-----------CCCCHH----------------HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCH--HHHHHHHHhCC-----------CCCCCc----------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 211 11111111100 000000 0012234466788899999999999987764
Q ss_pred c
Q 041249 570 S 570 (789)
Q Consensus 570 ~ 570 (789)
.
T Consensus 359 ~ 359 (365)
T 2y7j_A 359 Q 359 (365)
T ss_dssp H
T ss_pred c
Confidence 4
No 227
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.98 E-value=3.1e-33 Score=305.18 Aligned_cols=201 Identities=23% Similarity=0.322 Sum_probs=156.2
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc--cchhhHHHHHHHHHHhcCCCCccceeeeeeccCC-CCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSIRHRNLVKVFTACSGVD-YQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 345 (789)
.++|...+.||+|+||.||+|....+++.||||++... .....+.+.+|+++++.++||||+++++++.... .....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36888999999999999999999989999999998643 2334567889999999999999999999986542 11223
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++|+|++ +++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~-----------~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~k 172 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC-----------QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELK 172 (367)
T ss_dssp CCEEEEECC-CEECC----------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEE
T ss_pred eEEEEeccc-CCCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEE
Confidence 579999999 5788888742 35899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|+|||+++..... .....||..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 173 L~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 232 (367)
T 2fst_X 173 ILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232 (367)
T ss_dssp ECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred Eeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999875433 233568999999999877 6799999999999999999999999963
No 228
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.98 E-value=1e-33 Score=297.85 Aligned_cols=252 Identities=24% Similarity=0.328 Sum_probs=199.3
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCC-------
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDY------- 341 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------- 341 (789)
.++|...+.||+|+||.||+|.+..+++.||+|.++... ..+.+|++++++++||||+++++++....+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 357888999999999999999999899999999986543 356789999999999999999998754221
Q ss_pred ----CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCcee
Q 041249 342 ----QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNIL 417 (789)
Q Consensus 342 ----~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nil 417 (789)
......++||||+.+|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil 154 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKR--------RGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIF 154 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHG--------GGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhc--------cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEE
Confidence 1123579999999999999999643 2356899999999999999999999998 999999999999
Q ss_pred cCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccH
Q 041249 418 LDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNL 497 (789)
Q Consensus 418 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~ 497 (789)
++.++.+||+|||.+........ .....|+..|+|||.+.+..++.++||||||+++|||++|..|+...
T Consensus 155 ~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------- 224 (284)
T 2a19_B 155 LVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET------- 224 (284)
T ss_dssp EEETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------
T ss_pred EcCCCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------
Confidence 99999999999999988765432 22345899999999998888999999999999999999999987521
Q ss_pred HHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccccc
Q 041249 498 HNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPHI 575 (789)
Q Consensus 498 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~l 575 (789)
..+.... .+..+.. .+...+.+++..|++.++..||+..+....+..+
T Consensus 225 ~~~~~~~--------~~~~~~~----------------------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 225 SKFFTDL--------RDGIISD----------------------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp HHHHHHH--------HTTCCCT----------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHh--------hcccccc----------------------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1111111 0101100 1122345778899999999999998875554433
No 229
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.98 E-value=1.9e-33 Score=327.73 Aligned_cols=247 Identities=22% Similarity=0.310 Sum_probs=191.8
Q ss_pred CcccccCCccEEEEEEc--CCceEEEEEEeccccc--hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEEEEe
Q 041249 276 NLIGTGSFGSVYKGVLD--EGRTTVTVKVFNLHHH--RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKALVY 351 (789)
Q Consensus 276 ~~ig~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 351 (789)
+.||+|+||+||+|.+. .+++.||||+++.... ...+.+.+|++++++++||||++++++|... ..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE------SWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS------SEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC------CEEEEE
Confidence 47999999999999664 4578999999975432 3357899999999999999999999998532 478999
Q ss_pred eccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCcccc
Q 041249 352 EFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGL 431 (789)
Q Consensus 352 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 431 (789)
||+.+|+|.+++... ..+++.++..|+.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+
T Consensus 449 E~~~~g~L~~~l~~~----------~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGl 515 (635)
T 4fl3_A 449 EMAELGPLNKYLQQN----------RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGL 515 (635)
T ss_dssp ECCTTEEHHHHHHHC----------TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTH
T ss_pred EccCCCCHHHHHhhC----------CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCC
Confidence 999999999999643 56899999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCC-ccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHHhCCCch
Q 041249 432 ARFLPPTHV-QTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARMALPDHV 509 (789)
Q Consensus 432 a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 509 (789)
++....... ........+|..|+|||++....++.++|||||||++|||++ |+.||...... .+...+......
T Consensus 516 a~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~~~-- 591 (635)
T 4fl3_A 516 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGERM-- 591 (635)
T ss_dssp HHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCC--
T ss_pred ccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCC--
Confidence 998765442 222233457789999999998899999999999999999998 99999732111 111111111000
Q ss_pred hhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 510 MDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 510 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
. ....+...+.+++..|++.++.+||+...+...+.
T Consensus 592 ------~----------------------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 592 ------G----------------------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp ------C----------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred ------C----------------------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 0 01134456778899999999999999987754443
No 230
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.98 E-value=4.6e-33 Score=316.60 Aligned_cols=251 Identities=19% Similarity=0.243 Sum_probs=194.5
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.+.|...+.||+|+||+||+|....+++.||+|++.... ......+.+|+++++.++||||+++++++.... .
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR-----N 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----E
Confidence 346888999999999999999999899999999986543 334678899999999999999999999998765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC---Cc
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE---MV 423 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~---~~ 423 (789)
.++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.. +.
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~ 177 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHR----------MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDAL 177 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCC
T ss_pred EEEEEecCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCc
Confidence 99999999999999988543 46899999999999999999999998 9999999999999764 55
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
+||+|||+++....... .....||+.|+|||++. +.++.++|||||||++|+|++|+.||..... ..+...+..
T Consensus 178 ~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~ 251 (494)
T 3lij_A 178 IKIVDFGLSAVFENQKK---MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--QEILRKVEK 251 (494)
T ss_dssp EEECCCTTCEECBTTBC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH
T ss_pred EEEEECCCCeECCCCcc---ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHh
Confidence 99999999987654431 23456999999999876 5799999999999999999999999973211 111111111
Q ss_pred h-CCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 504 A-LPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 504 ~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
. .... .+ ........+.+++..|.+.++..|++...+..+
T Consensus 252 ~~~~~~-----~~-----------------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 252 GKYTFD-----SP-----------------------EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp TCCCCC-----SG-----------------------GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCCCCC-----ch-----------------------hcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1 0000 00 001223345578889999999999998877554
No 231
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.98 E-value=5.7e-33 Score=315.27 Aligned_cols=250 Identities=22% Similarity=0.252 Sum_probs=197.4
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc--cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
+.|...+.||+|+||+||+|....+++.||||++... .......+.+|++++++++||||+++++++.... ..
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~ 96 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS-----SF 96 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EE
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC-----EE
Confidence 5788899999999999999999989999999998643 2334578899999999999999999999998765 89
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecC---CCCce
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD---EEMVS 424 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~---~~~~~ 424 (789)
++||||+.+|+|.+++... ..+++.++..++.|++.||.|||+.+ |+||||||+||+++ .++.+
T Consensus 97 ~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~ 163 (486)
T 3mwu_A 97 YIVGELYTGGELFDEIIKR----------KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDI 163 (486)
T ss_dssp EEEECCCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCE
T ss_pred EEEEEcCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCE
Confidence 9999999999999988543 46899999999999999999999998 99999999999995 55689
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH-
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM- 503 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~- 503 (789)
||+|||+++....... .....||+.|+|||.+.+ .++.++|||||||++|+|++|+.||..... ......+..
T Consensus 164 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~ 237 (486)
T 3mwu_A 164 KIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRVETG 237 (486)
T ss_dssp EECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT
T ss_pred EEEECCcCeECCCCCc---cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC
Confidence 9999999987654432 234569999999999864 699999999999999999999999963211 111111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.+... . .........+.+++..|.+.+|..|++...+..+
T Consensus 238 ~~~~~------------~----------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 238 KYAFD------------L----------------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CCCSC------------S----------------GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCCC------------C----------------cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 0 0001223445678889999999999998876544
No 232
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.98 E-value=5.3e-32 Score=298.64 Aligned_cols=150 Identities=19% Similarity=0.200 Sum_probs=128.3
Q ss_pred CEEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCc
Q 041249 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQ 80 (789)
Q Consensus 1 ~l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 80 (789)
+|++++|.++...+..+..+++|++|++++|.+++..+..|+.+++|++|+|++|++++..|..++.+++|++|+|++|+
T Consensus 49 ~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 128 (390)
T 3o6n_A 49 IVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERND 128 (390)
T ss_dssp EEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCc
Confidence 47899999995444557899999999999999998888899999999999999999998888889999999999999999
Q ss_pred CCCCCccc-ccCCCCCCEEeccCCCCCCcCCccccCCcccccccccCCCCCccceeecCCcccCCCchhhhcCcccccEE
Q 041249 81 FRGSFPTE-VGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENL 159 (789)
Q Consensus 81 l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~l~~l~ls~N~l~~~~p~~~~~~~~l~~l 159 (789)
++ .+|.. |+.+++|++|++++|++++..|..+..+++|++|++++|++.+ . .+..+++|+.|
T Consensus 129 l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------~---~~~~l~~L~~L 191 (390)
T 3o6n_A 129 LS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-------------V---DLSLIPSLFHA 191 (390)
T ss_dssp CC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB-------------C---CGGGCTTCSEE
T ss_pred cC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc-------------c---cccccccccee
Confidence 99 55554 6999999999999999998888889998888887777766542 2 14556788999
Q ss_pred ecccCCCC
Q 041249 160 NLSYNDLE 167 (789)
Q Consensus 160 ~ls~N~~~ 167 (789)
++++|.++
T Consensus 192 ~l~~n~l~ 199 (390)
T 3o6n_A 192 NVSYNLLS 199 (390)
T ss_dssp ECCSSCCS
T ss_pred eccccccc
Confidence 98888664
No 233
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.98 E-value=7e-33 Score=300.66 Aligned_cols=271 Identities=16% Similarity=0.185 Sum_probs=201.4
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchh-----------------hHHHHHHHHHHhcCCCCccce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRA-----------------SRSFIAECRALRSIRHRNLVK 331 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~ 331 (789)
.++|...+.||+|+||.||+|.+ +++.||||++....... ...+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 46899999999999999999999 79999999986442221 178999999999999999999
Q ss_pred eeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhc-CCCCCceecC
Q 041249 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHH-DCQPITTHCD 410 (789)
Q Consensus 332 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~-~~~~~ivH~d 410 (789)
+++++...+ ..++||||+.+|+|.+++....... ......+++..+..++.|++.||+|||+ .+ ++|||
T Consensus 108 ~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~l~--~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~d 177 (348)
T 2pml_X 108 CEGIITNYD-----EVYIIYEYMENDSILKFDEYFFVLD--KNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRD 177 (348)
T ss_dssp CSEEEESSS-----EEEEEEECCTTCBSSEESSSEESSC--SSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCC
T ss_pred EEEEEeeCC-----eEEEEEeccCCCcHHHHHHHhhhhh--hccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecC
Confidence 999998765 8999999999999999832110000 0124678999999999999999999998 87 99999
Q ss_pred CCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCC-CcCc-cccchhhHHHHHHHHHhcCCCC
Q 041249 411 LKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS-EVST-NGDVYSYGILMLELIIRKKPSD 488 (789)
Q Consensus 411 lk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-k~DV~sfGvvl~elltG~~P~~ 488 (789)
|||+||+++.++.+||+|||.+...... ......|+..|+|||...+. .++. ++||||||+++|||++|+.||.
T Consensus 178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 253 (348)
T 2pml_X 178 VKPSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253 (348)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CChHhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999876543 23345689999999999887 6766 9999999999999999999997
Q ss_pred ccccCCccHHHHHHHh-C--CCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcc
Q 041249 489 IMFEGDMNLHNFARMA-L--PDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESL 565 (789)
Q Consensus 489 ~~~~~~~~~~~~~~~~-~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~ 565 (789)
..... ......+... . +........+..... .......+...+.+++..|++.++..|++.
T Consensus 254 ~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~li~~~L~~dP~~Rps~ 317 (348)
T 2pml_X 254 LKISL-VELFNNIRTKNIEYPLDRNHFLYPLTNKK---------------STCSNNFLSNEDIDFLKLFLRKNPAERITS 317 (348)
T ss_dssp CSSCS-HHHHHHHTSCCCCCCCSSSSSTTTTCC-----------------------CCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred CCCcH-HHHHHHHhccCcCCccchhhhhccccccc---------------cccchhhcCHHHHHHHHHHccCChhhCCCH
Confidence 43221 1111111111 0 000000000000000 000011234566788899999999999999
Q ss_pred cccccc
Q 041249 566 KLAGSI 571 (789)
Q Consensus 566 ~~~~~~ 571 (789)
..+..+
T Consensus 318 ~e~l~h 323 (348)
T 2pml_X 318 EDALKH 323 (348)
T ss_dssp HHHHTS
T ss_pred HHHhcC
Confidence 877553
No 234
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.98 E-value=5e-33 Score=291.42 Aligned_cols=249 Identities=22% Similarity=0.311 Sum_probs=192.2
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~ 345 (789)
.++|...+.||+|+||.||+|.+..+++.||||++.... ......+.+|++.+++++||||+++++++....
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT----- 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-----
Confidence 367888999999999999999999889999999986442 233567899999999999999999999987765
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+.+++|.+++... ..+++.++..++.|++.||+|||+.+ ++|+||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~ 151 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKH----------GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAK 151 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeccCCCcHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEE
Confidence 899999999999999998643 45889999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCCCCc-CccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHh
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV-STNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 504 (789)
|+|||.+........ .....|+..|+|||.+.+..+ +.++||||||+++|||++|+.||+.. ......+..
T Consensus 152 l~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~ 223 (276)
T 2h6d_A 152 IADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-----HVPTLFKKI 223 (276)
T ss_dssp ECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHH
T ss_pred EeecccccccCCCcc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC-----cHHHHHHHh
Confidence 999999987754431 223468899999999987765 78999999999999999999999732 111111111
Q ss_pred CCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 505 LPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 505 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.... ..+. ..+...+.+++..|.+.++..||+...+..+
T Consensus 224 ~~~~------~~~~----------------------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 224 RGGV------FYIP----------------------EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHCC------CCCC----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hcCc------ccCc----------------------hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000 0000 0122345678889999999999999876543
No 235
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.98 E-value=9.8e-33 Score=292.62 Aligned_cols=252 Identities=21% Similarity=0.260 Sum_probs=199.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc---------chhhHHHHHHHHHHhcCC-CCccceeeeeecc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH---------HRASRSFIAECRALRSIR-HRNLVKVFTACSG 338 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 338 (789)
.++|...+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468889999999999999999999899999999996543 122456889999999995 9999999999876
Q ss_pred CCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec
Q 041249 339 VDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL 418 (789)
Q Consensus 339 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill 418 (789)
.. ..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ ++||||||+||++
T Consensus 96 ~~-----~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~ 157 (298)
T 1phk_A 96 NT-----FFFLVFDLMKKGELFDYLTEK----------VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILL 157 (298)
T ss_dssp SS-----EEEEEEECCTTCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred CC-----eEEEEEeccCCCcHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEE
Confidence 55 899999999999999998643 46899999999999999999999998 9999999999999
Q ss_pred CCCCceeeCcccccccCCCCCCccceeeecccccccCcccCC------CCCcCccccchhhHHHHHHHHHhcCCCCcccc
Q 041249 419 DEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL------GSEVSTNGDVYSYGILMLELIIRKKPSDIMFE 492 (789)
Q Consensus 419 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~ 492 (789)
+.++.+||+|||.+........ .....|+..|+|||.+. ...++.++||||||+++|||++|+.||.....
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 234 (298)
T 1phk_A 158 DDDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 234 (298)
T ss_dssp CTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cCCCcEEEecccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH
Confidence 9999999999999987765432 22356899999999874 45689999999999999999999999963211
Q ss_pred CCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 493 GDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
......+...... ...+ ....+...+.+++..|++.++..|++......
T Consensus 235 --~~~~~~~~~~~~~----~~~~-----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 235 --MLMLRMIMSGNYQ----FGSP-----------------------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp --HHHHHHHHHTCCC----CCTT-----------------------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred --HHHHHHHhcCCcc----cCcc-----------------------cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1111111110000 0000 01123345668889999999999999887754
No 236
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.98 E-value=2.9e-33 Score=300.82 Aligned_cols=269 Identities=21% Similarity=0.229 Sum_probs=199.3
Q ss_pred ccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcC-CCCccceeeeee
Q 041249 258 LNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI-RHRNLVKVFTAC 336 (789)
Q Consensus 258 ~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 336 (789)
..+++.++....+.|...+.||+|+||.||+|.+..+++.||||++.... .....+.+|+++++++ +||||+++++++
T Consensus 12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 44556666677889999999999999999999998889999999986543 3456789999999999 899999999998
Q ss_pred ccCCCCC-CceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCc
Q 041249 337 SGVDYQG-NDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSN 415 (789)
Q Consensus 337 ~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~N 415 (789)
......+ ....++||||+.+|+|.+++... ....+++..+..++.|++.||+|||+.+ ++||||||+|
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~N 159 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT--------KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQN 159 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHHHHS--------GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGG
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHHHhc--------ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHH
Confidence 7643211 33789999999999999998643 2356889999999999999999999998 9999999999
Q ss_pred eecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCC-----CCCcCccccchhhHHHHHHHHHhcCCCCcc
Q 041249 416 ILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL-----GSEVSTNGDVYSYGILMLELIIRKKPSDIM 490 (789)
Q Consensus 416 ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~sfGvvl~elltG~~P~~~~ 490 (789)
|+++.++.+||+|||++........ ......|+..|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 160 Il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 237 (326)
T 2x7f_A 160 VLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237 (326)
T ss_dssp EEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred EEEcCCCCEEEeeCcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999987653321 122346899999999987 566899999999999999999999999632
Q ss_pred ccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 491 FEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
... .....+.. .+ .+... ...+...+.+++..|+..++..||+...+..
T Consensus 238 ~~~--~~~~~~~~-~~-------~~~~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 238 HPM--RALFLIPR-NP-------APRLK---------------------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CHH--HHHHHHHH-SC-------CCCCS---------------------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cHH--HHHHHhhc-Cc-------cccCC---------------------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 110 00000000 00 00000 0012234567888999999999999887754
Q ss_pred c
Q 041249 571 I 571 (789)
Q Consensus 571 ~ 571 (789)
+
T Consensus 287 h 287 (326)
T 2x7f_A 287 H 287 (326)
T ss_dssp S
T ss_pred C
Confidence 3
No 237
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.98 E-value=8.5e-33 Score=295.46 Aligned_cols=252 Identities=21% Similarity=0.213 Sum_probs=197.0
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.+.|...+.||+|+||.||+|.+..+++.||+|.+.... ....+.+|++++.+++||||+++++++.... ..+
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 100 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT-----DLW 100 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EEE
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-----EEE
Confidence 467889999999999999999999889999999986543 3467899999999999999999999987655 789
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCc
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGD 428 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 428 (789)
+||||+.+|+|.+++... ...+++.++..++.|++.||.|||..+ ++|+||||+||+++.++.+||+|
T Consensus 101 lv~e~~~~~~L~~~~~~~---------~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~d 168 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLR---------NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLAD 168 (314)
T ss_dssp EEEECCTTEEHHHHHHHH---------TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECC
T ss_pred EEeecCCCCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEee
Confidence 999999999999998522 346899999999999999999999998 99999999999999999999999
Q ss_pred ccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCc
Q 041249 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDH 508 (789)
Q Consensus 429 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 508 (789)
||.+........ ......|+..|+|||.+....++.++||||||+++|||++|+.||...... ..........
T Consensus 169 fg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~--- 241 (314)
T 3com_A 169 FGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM--RAIFMIPTNP--- 241 (314)
T ss_dssp CTTCEECBTTBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSC---
T ss_pred cccchhhhhhcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHhcCC---
Confidence 999987654321 123456899999999999989999999999999999999999999732110 0000000000
Q ss_pred hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 509 VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 509 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.+... ....+...+.+++..|++.++..||+......+
T Consensus 242 -----~~~~~--------------------~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 242 -----PPTFR--------------------KPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp -----CCCCS--------------------SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -----CcccC--------------------CcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000 001123456688889999999999999877553
No 238
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.98 E-value=4.9e-32 Score=315.52 Aligned_cols=138 Identities=17% Similarity=0.117 Sum_probs=118.7
Q ss_pred CCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEE
Q 041249 19 NLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETL 98 (789)
Q Consensus 19 ~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 98 (789)
.+++++.|++++|.+.+..+..|+.+++|++|+|++|.|++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46889999999999996555668899999999999999998888899999999999999999998778889999999999
Q ss_pred eccCCCCCCcCCccccCCcccccccccCCCCCccceeecCCcccCCCchhhhcCcccccEEecccCCCCCC
Q 041249 99 TVSGNILQGEIPSTLGSCIKLEILEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGM 169 (789)
Q Consensus 99 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~l~~l~ls~N~l~~~~p~~~~~~~~l~~l~ls~N~~~~~ 169 (789)
+|++|+|++..+..|+++++|++|+|+ +|.+++..|..+..+++|+.|++++|.+++.
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls-------------~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMS-------------NNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECC-------------SSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEee-------------CCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 999999996555667888777665554 5556677788899999999999999988754
No 239
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.98 E-value=3.8e-34 Score=306.57 Aligned_cols=262 Identities=22% Similarity=0.311 Sum_probs=199.7
Q ss_pred CCCCCcccccCCccEEEEEE----cCCceEEEEEEeccccc-hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 272 FSSANLIGTGSFGSVYKGVL----DEGRTTVTVKVFNLHHH-RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 272 f~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
|...+.||+|+||+||++.+ ..+++.||||+++.... .....+.+|++++++++||||+++++++.... ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG---AAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---TTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC---Cce
Confidence 47789999999999988765 34688999999976533 34567999999999999999999999987642 237
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+.+|+|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~-----------~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl 175 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH-----------SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKI 175 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS-----------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecccCCcHHHHHhhC-----------CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEE
Confidence 89999999999999999643 3899999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCc-cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhC
Q 041249 427 GDFGLARFLPPTHVQ-TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMAL 505 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 505 (789)
+|||.+......... .......++..|+|||.+.+..++.++||||||+++|||++|+.||....... .. ....
T Consensus 176 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~---~~--~~~~ 250 (318)
T 3lxp_A 176 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF---LE--LIGI 250 (318)
T ss_dssp CCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH---HH--HHCS
T ss_pred CCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh---hh--hhcc
Confidence 999999988765432 12234457888999999998899999999999999999999999987421110 00 0000
Q ss_pred CCc------hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 506 PDH------VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 506 ~~~------~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
... ..+.++.... ......+...+.+++..|++.++.+||+...+...+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 251 AQGQMTVLRLTELLERGER------------------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp CCHHHHHHHHHHHHHTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccchhHHHHHHHHhcccC------------------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 000 0011111000 0111234456778899999999999999987754443
No 240
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.98 E-value=2.2e-33 Score=298.26 Aligned_cols=254 Identities=22% Similarity=0.253 Sum_probs=195.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.+.|...+.||+|+||.||+|.+..+++.||+|++..........+.+|++++++++||||+++++++.... ..+
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 92 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG-----KLW 92 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC------CEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC-----eEE
Confidence 467888999999999999999999889999999997766666788999999999999999999999987655 789
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCc
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGD 428 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 428 (789)
+||||+.+|+|.+++... ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|
T Consensus 93 lv~e~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~D 160 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLEL---------DRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLAD 160 (302)
T ss_dssp EEEECCTTEEHHHHHHHH---------TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECC
T ss_pred EEEEeCCCCcHHHHHHhh---------ccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEE
Confidence 999999999999988532 245899999999999999999999998 99999999999999999999999
Q ss_pred ccccccCCCCCCccceeeecccccccCcccC-----CCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYG-----LGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 429 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
||++....... .......|+..|+|||.+ ....++.++||||||+++|||++|+.||...... .......+.
T Consensus 161 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~ 237 (302)
T 2j7t_A 161 FGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKS 237 (302)
T ss_dssp CHHHHHHHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHS
T ss_pred CCCCccccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-HHHHHHhcc
Confidence 99875422111 011234589999999987 4667899999999999999999999999732110 011111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
..+ ... ....+...+.+++..|++.++..||+......+
T Consensus 238 ~~~---------~~~--------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 238 DPP---------TLL--------------------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp CCC---------CCS--------------------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred CCc---------ccC--------------------CccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000 000 011223456678889999999999999877554
No 241
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.98 E-value=7.9e-33 Score=315.48 Aligned_cols=253 Identities=22% Similarity=0.280 Sum_probs=198.3
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc-------------hhhHHHHHHHHHHhcCCCCccceeeee
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-------------RASRSFIAECRALRSIRHRNLVKVFTA 335 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l~~~ 335 (789)
.++|...+.||+|+||+||+|....+++.||+|++..... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 5789999999999999999999998999999999865421 235678999999999999999999999
Q ss_pred eccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCc
Q 041249 336 CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSN 415 (789)
Q Consensus 336 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~N 415 (789)
+.... ..++||||+.+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|
T Consensus 115 ~~~~~-----~~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~N 176 (504)
T 3q5i_A 115 FEDKK-----YFYLVTEFYEGGELFEQIINR----------HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPEN 176 (504)
T ss_dssp EECSS-----EEEEEEECCTTCBHHHHHHHH----------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGG
T ss_pred EEcCC-----EEEEEEecCCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHH
Confidence 98765 899999999999999988543 46899999999999999999999998 9999999999
Q ss_pred eecCCCC---ceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCcccc
Q 041249 416 ILLDEEM---VSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFE 492 (789)
Q Consensus 416 ill~~~~---~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~ 492 (789)
|+++.++ .+||+|||+++....... .....||+.|+|||.+. +.++.++|||||||++|+|++|+.||....
T Consensus 177 il~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~- 251 (504)
T 3q5i_A 177 ILLENKNSLLNIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN- 251 (504)
T ss_dssp EEESSTTCCSSEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-
T ss_pred EEEecCCCCccEEEEECCCCEEcCCCCc---cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC-
Confidence 9998775 699999999988765432 23356999999999876 569999999999999999999999997321
Q ss_pred CCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 493 GDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
......... ...+..... ........+.+++..|.+.++..|++..++..++
T Consensus 252 ----~~~~~~~i~--------~~~~~~~~~----------------~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~ 303 (504)
T 3q5i_A 252 ----DQDIIKKVE--------KGKYYFDFN----------------DWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303 (504)
T ss_dssp ----HHHHHHHHH--------HCCCCCCHH----------------HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ----HHHHHHHHH--------cCCCCCCcc----------------ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCH
Confidence 111111110 000000000 0012234566788899999999999998775543
No 242
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.98 E-value=6.3e-33 Score=297.68 Aligned_cols=253 Identities=19% Similarity=0.220 Sum_probs=195.6
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--------hhhHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--------RASRSFIAECRALRSIRHRNLVKVFTACSGVD 340 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 340 (789)
.++|...+.||+|+||.||+|.+..+++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 87 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE- 87 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-
Confidence 3578889999999999999999998999999999864321 1234588999999999999999999998543
Q ss_pred CCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC
Q 041249 341 YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE 420 (789)
Q Consensus 341 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~ 420 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.
T Consensus 88 -----~~~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~ 149 (322)
T 2ycf_A 88 -----DYYIVLELMEGGELFDKVVGN----------KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSS 149 (322)
T ss_dssp -----SEEEEEECCTTEETHHHHSTT----------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESS
T ss_pred -----ceEEEEecCCCCcHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEec
Confidence 379999999999999998643 56899999999999999999999998 999999999999987
Q ss_pred CCc---eeeCcccccccCCCCCCccceeeecccccccCcccCC---CCCcCccccchhhHHHHHHHHHhcCCCCccccCC
Q 041249 421 EMV---SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL---GSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGD 494 (789)
Q Consensus 421 ~~~---~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~ 494 (789)
++. +||+|||.++...... ......||..|+|||.+. ...++.++|||||||++|||++|+.||......
T Consensus 150 ~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~- 225 (322)
T 2ycf_A 150 QEEDCLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ- 225 (322)
T ss_dssp SSSSCCEEECCCTTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-
T ss_pred CCCCCeEEEccCccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-
Confidence 654 9999999998765432 122346899999999863 567899999999999999999999999743222
Q ss_pred ccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 495 MNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
..+...+.........+ ....+...+.+++..|++.++..|++......+
T Consensus 226 ~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 226 VSLKDQITSGKYNFIPE---------------------------VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp SCHHHHHHHTCCCCCHH---------------------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHhCccccCch---------------------------hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 12222222111100000 001223456688889999999999999877543
No 243
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.98 E-value=6.4e-33 Score=301.58 Aligned_cols=206 Identities=24% Similarity=0.339 Sum_probs=174.1
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
.++|...+.||+|+||.||+|.+..+++.||||+++... ......+.+|++++++++||||+++++++...........
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468889999999999999999999899999999996543 3345678899999999999999999999876544445578
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
++||||+. |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 90 ~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~ 154 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST-----------QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVC 154 (353)
T ss_dssp EEEECCCS-EEHHHHHHH-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEEC
T ss_pred EEEEeccC-ccHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEE
Confidence 99999998 689988853 35899999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCcc--------ceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 428 DFGLARFLPPTHVQT--------SSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 428 Dfgla~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|||.++......... ......||..|+|||.+.. ..++.++|||||||++|||++|+.||..
T Consensus 155 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 225 (353)
T 2b9h_A 155 DFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225 (353)
T ss_dssp CCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999876433111 1223468999999998754 6789999999999999999999999974
No 244
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.98 E-value=3.2e-33 Score=307.46 Aligned_cols=284 Identities=19% Similarity=0.172 Sum_probs=196.9
Q ss_pred HHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCC---
Q 041249 265 LHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDY--- 341 (789)
Q Consensus 265 ~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 341 (789)
++...++|...+.||+|+||+||+|....+++.||||++..... ...+|+++++.++||||+++++++.....
T Consensus 2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 34567789999999999999999999998999999999864432 23479999999999999999999854321
Q ss_pred ------------------------------CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHH
Q 041249 342 ------------------------------QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDV 391 (789)
Q Consensus 342 ------------------------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i 391 (789)
......++||||+. |+|.+.+... ......+++..+..++.|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~------~~~~~~l~~~~~~~i~~qi 150 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSF------IRSGRSIPMNLISIYIYQL 150 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHH------HHTTCCCCHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHH------HhcCCCCCHHHHHHHHHHH
Confidence 22335889999999 5777766431 1134578999999999999
Q ss_pred HHHHhhhhcCCCCCceecCCCCCceecC-CCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCC-CcCcccc
Q 041249 392 ASALDYLHHDCQPITTHCDLKPSNILLD-EEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS-EVSTNGD 469 (789)
Q Consensus 392 a~gL~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~D 469 (789)
+.||+|||+.+ |+||||||+||+++ +++.+||+|||.++....... .....||..|+|||.+.+. .++.++|
T Consensus 151 ~~aL~~LH~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~D 224 (383)
T 3eb0_A 151 FRAVGFIHSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSID 224 (383)
T ss_dssp HHHHHHHHTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHH
T ss_pred HHHHHHHHHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchh
Confidence 99999999988 99999999999997 688999999999997754432 2234588999999998765 4899999
Q ss_pred chhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCc--hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHH
Q 041249 470 VYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDH--VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISM 547 (789)
Q Consensus 470 V~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 547 (789)
||||||++|||++|+.||..... ...+...++..-... .....++...... ........++......+...+
T Consensus 225 iwslG~il~ell~g~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 298 (383)
T 3eb0_A 225 LWSIGCVFGELILGKPLFSGETS-IDQLVRIIQIMGTPTKEQMIRMNPHYTEVR-----FPTLKAKDWRKILPEGTPSLA 298 (383)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCTTC--CC-----CCCCCCCCHHHHSCTTCCHHH
T ss_pred hhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHhCccccccc-----CCccCcccHHhhCCCCCCHHH
Confidence 99999999999999999974211 111222222111110 0000111000000 000000000000111234456
Q ss_pred HhhccccceeeEeccCcccccccc
Q 041249 548 LRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 548 ~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.+++..|.+.++..|++..++..+
T Consensus 299 ~~li~~~L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 299 IDLLEQILRYEPDLRINPYEAMAH 322 (383)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHccCChhhCCCHHHHhcC
Confidence 788999999999999999877543
No 245
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.98 E-value=5.6e-33 Score=297.44 Aligned_cols=206 Identities=23% Similarity=0.344 Sum_probs=167.3
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCC--------
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVD-------- 340 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------- 340 (789)
.++|...+.||+|+||.||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 357888999999999999999999889999999998766666788999999999999999999999875432
Q ss_pred -CCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecC
Q 041249 341 -YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD 419 (789)
Q Consensus 341 -~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~ 419 (789)
.......++||||+. |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~ 154 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ-----------GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFIN 154 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc-----------CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEc
Confidence 122347899999998 699998843 35889999999999999999999998 99999999999997
Q ss_pred -CCCceeeCcccccccCCCCCC-ccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 420 -EEMVSHVGDFGLARFLPPTHV-QTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 420 -~~~~~kl~Dfgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
+++.+||+|||.++....... ........++..|+|||.+.. ..++.++||||||+++|||++|+.||..
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 227 (320)
T 2i6l_A 155 TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAG 227 (320)
T ss_dssp TTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCC
Confidence 567999999999997754321 112223457889999998765 6789999999999999999999999974
No 246
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=4.6e-33 Score=301.88 Aligned_cols=273 Identities=22% Similarity=0.273 Sum_probs=196.0
Q ss_pred HhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccch-----hhHHHHHHHHHHhcCCCCccceeeeeeccCCC
Q 041249 267 NATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR-----ASRSFIAECRALRSIRHRNLVKVFTACSGVDY 341 (789)
Q Consensus 267 ~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 341 (789)
...++|...+.||+|+||.||+|.+..+++.||||++...... ..+.+.+|++++++++||||+++++++....
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS- 85 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT-
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC-
Confidence 3457899999999999999999999988999999998654221 2357889999999999999999999987655
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE 421 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~ 421 (789)
..++||||+.+ ++.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.+
T Consensus 86 ----~~~lv~e~~~~-~l~~~~~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~ 148 (346)
T 1ua2_A 86 ----NISLVFDFMET-DLEVIIKDN---------SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDEN 148 (346)
T ss_dssp ----CCEEEEECCSE-EHHHHHTTC---------CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred ----ceEEEEEcCCC-CHHHHHHhc---------CcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCC
Confidence 78999999996 888888543 346888999999999999999999998 9999999999999999
Q ss_pred CceeeCcccccccCCCCCCccceeeecccccccCcccCCCC-CcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHH
Q 041249 422 MVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNF 500 (789)
Q Consensus 422 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~ 500 (789)
+.+||+|||+++....... ......||..|+|||.+.+. .++.++|||||||++|||++|..||..... ...+...
T Consensus 149 ~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i 225 (346)
T 1ua2_A 149 GVLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRI 225 (346)
T ss_dssp CCEEECCCGGGSTTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHH
T ss_pred CCEEEEecccceeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHH
Confidence 9999999999987754332 12335689999999998764 489999999999999999999999864311 1112222
Q ss_pred HHHhC-CC-c-hhhhc---cCCcccChhhHHHhhhhhhhhhh-hchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 501 ARMAL-PD-H-VMDIV---DSTLLNDVEDLAIISNQRQRQIR-VNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 501 ~~~~~-~~-~-~~~~~---d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
..... +. . ..+.. +........ ..+ ......+...+.+++..|.+.++..|++..++..+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 226 FETLGTPTEEQWPDMCSLPDYVTFKSFP-----------GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HHHHCCCCTTTSSSTTSSTTCCCCCCCC-----------CCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHcCCCChhhhhhhccCcccccccccC-----------CCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 22111 10 0 11100 000000000 000 00011234567788899999999999999877543
No 247
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=2.3e-33 Score=305.13 Aligned_cols=203 Identities=24% Similarity=0.312 Sum_probs=172.5
Q ss_pred hcCCCCCCcccccCCccEEEEEEc---CCceEEEEEEecccc----chhhHHHHHHHHHHhcC-CCCccceeeeeeccCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLD---EGRTTVTVKVFNLHH----HRASRSFIAECRALRSI-RHRNLVKVFTACSGVD 340 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 340 (789)
.++|...+.||+|+||.||+|... .+++.||||+++... ......+..|+++++++ .||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 367889999999999999999984 478999999986432 23345678899999999 6999999999987765
Q ss_pred CCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC
Q 041249 341 YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE 420 (789)
Q Consensus 341 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~ 420 (789)
..++||||+.+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 133 -----~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~ 194 (355)
T 1vzo_A 133 -----KLHLILDYINGGELFTHLSQR----------ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDS 194 (355)
T ss_dssp -----EEEEEECCCCSCBHHHHHHHH----------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECT
T ss_pred -----eEEEEeecCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECC
Confidence 789999999999999998643 46899999999999999999999998 999999999999999
Q ss_pred CCceeeCcccccccCCCCCCccceeeecccccccCcccCCC--CCcCccccchhhHHHHHHHHHhcCCCCcc
Q 041249 421 EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG--SEVSTNGDVYSYGILMLELIIRKKPSDIM 490 (789)
Q Consensus 421 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~sfGvvl~elltG~~P~~~~ 490 (789)
++.+||+|||+++........ ......||..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 195 ~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 265 (355)
T 1vzo_A 195 NGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265 (355)
T ss_dssp TSCEEESCSSEEEECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred CCcEEEeeCCCCeecccCCCC-cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence 999999999999876543321 2233569999999999885 34789999999999999999999999743
No 248
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.98 E-value=1.2e-31 Score=312.25 Aligned_cols=117 Identities=15% Similarity=0.121 Sum_probs=94.5
Q ss_pred CCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEeccCCCCCCcCCccccCCcccccc
Q 041249 43 LCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEIL 122 (789)
Q Consensus 43 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l 122 (789)
.+++++.|++++|.++...+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 36788999999999986556667889999999999999987777789999999999999999998778888888777666
Q ss_pred cccCCCCCccceeecCCcccCCCchhhhcCcccccEEecccCCCCCCCCC
Q 041249 123 EMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLEGMVPT 172 (789)
Q Consensus 123 ~l~~N~~~~l~~l~ls~N~l~~~~p~~~~~~~~l~~l~ls~N~~~~~~~~ 172 (789)
+|++|. +++..+..|..+++|++|++++|.|++.+|.
T Consensus 129 ~L~~n~-------------l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 165 (597)
T 3oja_B 129 VLERND-------------LSSLPRGIFHNTPKLTTLSMSNNNLERIEDD 165 (597)
T ss_dssp ECCSSC-------------CCCCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred EeeCCC-------------CCCCCHHHhccCCCCCEEEeeCCcCCCCChh
Confidence 555544 5544555578889999999999988876553
No 249
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=4.4e-31 Score=286.42 Aligned_cols=170 Identities=21% Similarity=0.303 Sum_probs=80.3
Q ss_pred ccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEE
Q 041249 578 LSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLS 657 (789)
Q Consensus 578 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 657 (789)
+++|++|++++|++++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|++|+
T Consensus 176 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 249 (347)
T 4fmz_A 176 LTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLE 249 (347)
T ss_dssp CTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEE
Confidence 3444555555555553222 4455555555555555553322 4455555555555555553222 44555555555
Q ss_pred ccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccc
Q 041249 658 LGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQG 737 (789)
Q Consensus 658 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 737 (789)
+++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..|..+++|+.|+|++|++++
T Consensus 250 l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 250 IGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp CCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred CCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 555555432 2344455555555555555432 234445555555555555544444444445555555555555442
Q ss_pred cCCcccccCCCCccEEEccCCcc
Q 041249 738 NIPLDYGFTLQNLQYFSIGTNRI 760 (789)
Q Consensus 738 ~ip~~~~~~l~~L~~L~L~~N~l 760 (789)
..| + ..+++|++|++++|+|
T Consensus 326 ~~~--~-~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 326 IRP--L-ASLSKMDSADFANQVI 345 (347)
T ss_dssp CGG--G-GGCTTCSEESSSCC--
T ss_pred ccC--h-hhhhccceeehhhhcc
Confidence 222 1 1344444444444444
No 250
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.98 E-value=8.8e-34 Score=303.07 Aligned_cols=265 Identities=19% Similarity=0.275 Sum_probs=195.8
Q ss_pred ccccccHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCC--CCccce
Q 041249 256 SLLNLSYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIR--HRNLVK 331 (789)
Q Consensus 256 ~~~~~~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~ 331 (789)
+...+.++.+....++|...+.||+|+||.||++... +++.||||++.... ......+.+|++++.+++ |+||++
T Consensus 14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~ 92 (313)
T 3cek_A 14 GTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 92 (313)
T ss_dssp ------CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCC
T ss_pred CCCCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEE
Confidence 4455666677777889999999999999999999986 58999999996543 334577899999999997 599999
Q ss_pred eeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCC
Q 041249 332 VFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDL 411 (789)
Q Consensus 332 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dl 411 (789)
+++++.... ..++||| +.+++|.+++... ..+++.++..++.|++.||+|||+.+ |+||||
T Consensus 93 ~~~~~~~~~-----~~~lv~e-~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dl 153 (313)
T 3cek_A 93 LYDYEITDQ-----YIYMVME-CGNIDLNSWLKKK----------KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDL 153 (313)
T ss_dssp EEEEEECSS-----EEEEEEC-CCSEEHHHHHHHC----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCC
T ss_pred EEEEeecCC-----EEEEEEe-cCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCC
Confidence 999988765 7899999 6678999998643 46889999999999999999999998 999999
Q ss_pred CCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCC-----------CCcCccccchhhHHHHHHH
Q 041249 412 KPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-----------SEVSTNGDVYSYGILMLEL 480 (789)
Q Consensus 412 k~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DV~sfGvvl~el 480 (789)
||+||++++ +.+||+|||.++...............|+..|+|||.+.. ..++.++||||||+++|||
T Consensus 154 kp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el 232 (313)
T 3cek_A 154 KPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 232 (313)
T ss_dssp CGGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHH
T ss_pred CcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHH
Confidence 999999964 8999999999998765543333334568999999999865 4689999999999999999
Q ss_pred HHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEe
Q 041249 481 IIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTIL 560 (789)
Q Consensus 481 ltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l 560 (789)
++|+.||...... ...+ . .+.++...... ...+...+.+++..|++.++.
T Consensus 233 ~~g~~pf~~~~~~---~~~~-~--------~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~ 282 (313)
T 3cek_A 233 TYGKTPFQQIINQ---ISKL-H--------AIIDPNHEIEF------------------PDIPEKDLQDVLKCCLKRDPK 282 (313)
T ss_dssp HHSSCTTTTCCSH---HHHH-H--------HHHCTTSCCCC------------------CCCSCHHHHHHHHHHTCSSTT
T ss_pred HhCCCchhhHHHH---HHHH-H--------HHHhcccccCC------------------cccchHHHHHHHHHHccCCcc
Confidence 9999999743221 1111 1 11111111000 001123456778899999999
Q ss_pred ccCcccccccc
Q 041249 561 DLESLKLAGSI 571 (789)
Q Consensus 561 ~l~s~~~~~~~ 571 (789)
.||+...+...
T Consensus 283 ~Rps~~ell~h 293 (313)
T 3cek_A 283 QRISIPELLAH 293 (313)
T ss_dssp TSCCHHHHHTS
T ss_pred cCcCHHHHhcC
Confidence 99998876543
No 251
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.98 E-value=1.3e-32 Score=300.06 Aligned_cols=293 Identities=17% Similarity=0.178 Sum_probs=194.9
Q ss_pred HHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCC-
Q 041249 263 QNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDY- 341 (789)
Q Consensus 263 ~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~- 341 (789)
.+.....++|...+.||+|+||+||+|.+..+++.||||++.... .......++++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 345566789999999999999999999999899999999985432 234467788888999999999999999865432
Q ss_pred -CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhh--cCCCCCceecCCCCCceec
Q 041249 342 -QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLH--HDCQPITTHCDLKPSNILL 418 (789)
Q Consensus 342 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--~~~~~~ivH~dlk~~Nill 418 (789)
......++||||+.++ +...+... ......+++..+..++.|++.||.||| +.+ |+||||||+||++
T Consensus 95 ~~~~~~~~lv~e~~~~~-l~~~~~~~------~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll 164 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDT-LHRCCRNY------YRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLV 164 (360)
T ss_dssp CTTCEEEEEEEECCSCB-HHHHHHHH------HTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEE
T ss_pred cccceeEEEEeeccccc-HHHHHHHH------hhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEE
Confidence 1222478999999964 44333211 113456889999999999999999999 777 9999999999999
Q ss_pred CC-CCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCC-cCccccchhhHHHHHHHHHhcCCCCccccCCcc
Q 041249 419 DE-EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDIMFEGDMN 496 (789)
Q Consensus 419 ~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~ 496 (789)
+. ++.+||+|||+++....... .....||..|+|||.+.+.. ++.++|||||||++|||++|+.||..... ...
T Consensus 165 ~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~ 240 (360)
T 3e3p_A 165 NEADGTLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-AGQ 240 (360)
T ss_dssp ETTTTEEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHH
T ss_pred eCCCCcEEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-HHH
Confidence 97 89999999999997765442 22346899999999986654 89999999999999999999999974321 112
Q ss_pred HHHHHHHhCCCc--hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 497 LHNFARMALPDH--VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 497 ~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
+....+...... ....+++...... +..................+...+.+++..|.+.++..|++..++..++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 316 (360)
T 3e3p_A 241 LHEIVRVLGCPSREVLRKLNPSHTDVD--LYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316 (360)
T ss_dssp HHHHHHHHCCCCHHHHHHHCTTCCCGG--GGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSG
T ss_pred HHHHHHHcCCCCHHHHHhcccchhhcc--ccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCc
Confidence 222222111111 1111111111000 0000000000000111122456778999999999999999998875543
No 252
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.98 E-value=4.1e-33 Score=299.66 Aligned_cols=265 Identities=24% Similarity=0.346 Sum_probs=203.8
Q ss_pred hcCCCCCCcccccCCccEEEEEE----cCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVL----DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~ 344 (789)
.++|...+.||+|+||.||+|.+ ..+++.||||++........+.+.+|++++++++||||+++++++.... .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---R 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC---C
Confidence 35678889999999999999995 4578999999998776666788999999999999999999999886533 2
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCce
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVS 424 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 424 (789)
...++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~ 184 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKH---------KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 184 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHS---------TTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEE
T ss_pred CceEEEEECCCCCCHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcE
Confidence 2579999999999999999643 245899999999999999999999988 9999999999999999999
Q ss_pred eeCcccccccCCCCCCcc-ceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 425 HVGDFGLARFLPPTHVQT-SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
||+|||+++......... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+.... ..+.+.
T Consensus 185 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~------~~~~~~ 258 (326)
T 2w1i_A 185 KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP------AEFMRM 258 (326)
T ss_dssp EECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH------HHHHHH
T ss_pred EEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH------HHHHHh
Confidence 999999999876554221 1223457778999999988889999999999999999999999986321 111111
Q ss_pred hCCCc--------hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 504 ALPDH--------VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 504 ~~~~~--------~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
.-... +.+.+.... +......+...+.+++..|++.++..||+...+...+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L 317 (326)
T 2w1i_A 259 IGNDKQGQMIVFHLIELLKNNG------------------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 317 (326)
T ss_dssp HCTTCCTHHHHHHHHHHHHTTC------------------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred hccccchhhhHHHHHHHhhcCC------------------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 10000 000000000 0001123455677889999999999999988775443
No 253
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=4.4e-31 Score=286.39 Aligned_cols=194 Identities=26% Similarity=0.376 Sum_probs=166.6
Q ss_pred CccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEE
Q 041249 577 NLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVL 656 (789)
Q Consensus 577 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 656 (789)
.+++|++|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|++.+..+ +..+++|++|
T Consensus 153 ~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L 226 (347)
T 4fmz_A 153 NMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSL 226 (347)
T ss_dssp TCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred hCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEE
Confidence 45667888899999885544 8899999999999999995533 8899999999999999995544 8899999999
Q ss_pred EccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCccc
Q 041249 657 SLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQ 736 (789)
Q Consensus 657 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 736 (789)
++++|++++..+ +..+++|++|++++|+++. + ..+..+++|++|++++|++++. ..+..+++|+.|++++|+++
T Consensus 227 ~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 227 KIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred EccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCC
Confidence 999999985544 8899999999999999995 3 4699999999999999999964 46899999999999999999
Q ss_pred ccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCc
Q 041249 737 GNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLT 785 (789)
Q Consensus 737 ~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 785 (789)
+..|..+. .+++|++|+|++|++++..| +..+++|+.|++++|+|+
T Consensus 301 ~~~~~~l~-~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 301 NEDMEVIG-GLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGGHHHHH-TCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CcChhHhh-ccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 55555454 89999999999999997666 889999999999999986
No 254
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=1.6e-32 Score=293.07 Aligned_cols=232 Identities=27% Similarity=0.452 Sum_probs=220.2
Q ss_pred ceeeEeccCcccccc--cccccccCccccchhcccC-CcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcE
Q 041249 555 QKVTILDLESLKLAG--SILPHIGNLSFLKILNLEN-NSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIR 631 (789)
Q Consensus 555 ~~l~~l~l~s~~~~~--~~l~~l~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~ 631 (789)
.+++.+++..+.+.+ ..+..+.++++|++|+|++ |++.+.+|..|..+++|++|+|++|+|++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578999999999988 7889999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCC-CCCEEEccCCcCCccCCccccCCCCCCeeeccCcc
Q 041249 632 IGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLS-SLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNR 710 (789)
Q Consensus 632 L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 710 (789)
|+|++|++++.+|..|..+++|++|+|++|++++.+|..|..++ +|++|+|++|++++.+|..|..++ |++|+|++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999999999999999999999999999999999999998 999999999999999999999997 9999999999
Q ss_pred ccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 711 LSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 711 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
+++..|..|..+++|+.|+|++|++++.+|. +. .+++|++|+|++|+|++.+|..+..+++|+.|++++|+++|.+|
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VG-LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CC-CCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-cc-ccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 9999999999999999999999999966665 43 78999999999999999999999999999999999999999887
No 255
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.98 E-value=1.4e-32 Score=309.46 Aligned_cols=259 Identities=19% Similarity=0.269 Sum_probs=198.7
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCcccee-eeeeccCCCCCCceE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKV-FTACSGVDYQGNDFK 347 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l-~~~~~~~~~~~~~~~ 347 (789)
.++|...+.||+|+||.||+|.+..+++.||||++..... ...+..|++++..++|++.+.. ..++.... ..
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~-----~~ 78 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGD-----YN 78 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETT-----EE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCC-----EE
Confidence 4689999999999999999999988999999999765433 2458899999999987554444 44444333 78
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec---CCCCce
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL---DEEMVS 424 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill---~~~~~~ 424 (789)
++||||+ +++|.+++... ...+++.+++.|+.||+.||+|||..+ ||||||||+|||+ +.++.+
T Consensus 79 ~lvme~~-g~sL~~ll~~~---------~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~v 145 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNFC---------SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQV 145 (483)
T ss_dssp EEEEECC-CCBHHHHHHHT---------TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCE
T ss_pred EEEEECC-CCCHHHHHHhh---------cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeE
Confidence 9999999 89999999643 346899999999999999999999998 9999999999999 588999
Q ss_pred eeCcccccccCCCCCCc-----cceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCc--cH
Q 041249 425 HVGDFGLARFLPPTHVQ-----TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDM--NL 497 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~--~~ 497 (789)
||+|||+++........ .......||..|+|||++.+..++.++|||||||++|||++|+.||........ .+
T Consensus 146 kL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~ 225 (483)
T 3sv0_A 146 YIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY 225 (483)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHH
T ss_pred EEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHH
Confidence 99999999987654421 122256799999999999999999999999999999999999999975322110 11
Q ss_pred HHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccccc
Q 041249 498 HNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILPH 574 (789)
Q Consensus 498 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~~ 574 (789)
..+........... ....+..++.+++..|++.++.+||+...+...+..
T Consensus 226 ~~i~~~~~~~~~~~---------------------------l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~ 275 (483)
T 3sv0_A 226 EKISEKKVATSIEA---------------------------LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRD 275 (483)
T ss_dssp HHHHHHHHHSCHHH---------------------------HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred HHHhhccccccHHH---------------------------HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 11111111000000 001234567788999999999999999877554443
No 256
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.97 E-value=6e-33 Score=298.53 Aligned_cols=261 Identities=23% Similarity=0.320 Sum_probs=197.8
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEE--EEEEeccc-cchhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTV--TVKVFNLH-HHRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGN 344 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~ 344 (789)
.++|...+.||+|+||.||+|.+..++..+ |+|.++.. .....+.+.+|++++.++ +||||+++++++....
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~---- 99 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG---- 99 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT----
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC----
Confidence 367888999999999999999998788755 99988643 334456789999999999 8999999999997765
Q ss_pred ceEEEEeeccCCCChhhhccCCCCCcc------ccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec
Q 041249 345 DFKALVYEFMQNGSLEEWLYPVNREDE------VDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL 418 (789)
Q Consensus 345 ~~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill 418 (789)
..++||||+++|+|.+++........ .......+++.++..++.|++.||+|||+.+ |+||||||+||++
T Consensus 100 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~ 175 (327)
T 1fvr_A 100 -YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILV 175 (327)
T ss_dssp -EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred -ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEE
Confidence 89999999999999999975410000 0012357899999999999999999999998 9999999999999
Q ss_pred CCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccH
Q 041249 419 DEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNL 497 (789)
Q Consensus 419 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~ 497 (789)
+.++.+||+|||+++...... ......++..|+|||.+....++.++||||||+++|||++ |+.||... ..
T Consensus 176 ~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-----~~ 247 (327)
T 1fvr_A 176 GENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-----TC 247 (327)
T ss_dssp CGGGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-----CH
T ss_pred cCCCeEEEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC-----cH
Confidence 999999999999998543221 1123346789999999988889999999999999999998 99999632 11
Q ss_pred HHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 498 HNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 498 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
.......... ..+. ....+...+.+++..|++.++..||+.......+
T Consensus 248 ~~~~~~~~~~-----~~~~----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 295 (327)
T 1fvr_A 248 AELYEKLPQG-----YRLE----------------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 295 (327)
T ss_dssp HHHHHHGGGT-----CCCC----------------------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHhhcC-----CCCC----------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 1221111000 0000 0112334566888899999999999988775443
No 257
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.97 E-value=8.9e-33 Score=293.09 Aligned_cols=201 Identities=27% Similarity=0.391 Sum_probs=171.5
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
++|...+.||+|+||.||+|....+++.||||+++... ......+.+|++++++++||||+++++++.... ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN-----KL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC-----ce
Confidence 57888899999999999999999899999999986543 233467889999999999999999999998765 78
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeC
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVG 427 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 427 (789)
++||||+. |+|.+++... ....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+
T Consensus 78 ~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~ 145 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDAS--------ALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLA 145 (299)
T ss_dssp EEEEECCS-EEHHHHHHHT--------TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEEC
T ss_pred EEEEEccc-CCHHHHHHhh--------hccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEEC
Confidence 99999998 6999988644 2345889999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCCC-cCccccchhhHHHHHHHHHhcCCCCc
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSE-VSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|||.+......... .....+|..|+|||.+.+.. ++.++||||||+++|||++|+.||..
T Consensus 146 dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 206 (299)
T 2r3i_A 146 DFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPG 206 (299)
T ss_dssp STTHHHHHCCCSBC--TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cchhhhhccCCccc--cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999876543211 12345889999999988765 79999999999999999999999974
No 258
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=1.4e-32 Score=301.02 Aligned_cols=200 Identities=23% Similarity=0.312 Sum_probs=168.2
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCC-CCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQ-GND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~~~ 345 (789)
.++|...+.||+|+||+||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++...... ...
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 368888999999999999999999899999999996542 23357788999999999999999999998765421 112
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+. |+|.+++. ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 121 ~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~k 184 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG------------MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELK 184 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT------------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEE
T ss_pred eEEEEEcccc-ccHHHHhh------------cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEE
Confidence 3499999998 68888773 34899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|+|||.++...... ....||..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 185 L~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 244 (371)
T 4exu_A 185 ILDFGLARHADAEM-----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244 (371)
T ss_dssp ECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred EEecCcccccccCc-----CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 99999998654332 23568999999999877 6799999999999999999999999974
No 259
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.97 E-value=1e-33 Score=307.86 Aligned_cols=262 Identities=15% Similarity=0.149 Sum_probs=196.8
Q ss_pred hcCCCCCCcccccCCccEEEEEEcC--------CceEEEEEEeccccchhhHHHHHHHHHHhcCCCCcccee--------
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDE--------GRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKV-------- 332 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l-------- 332 (789)
.++|...+.||+|+||.||+|.+.. .++.||+|++... ..+.+|++++++++||||+++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3678889999999999999999986 3789999998643 468899999999999999984
Q ss_pred -------eeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCC
Q 041249 333 -------FTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPI 405 (789)
Q Consensus 333 -------~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ 405 (789)
++++... ....++||||+ +|+|.+++... ....+++.++..++.|++.||+|||+.+
T Consensus 116 ~~~i~~~~~~~~~~----~~~~~lv~e~~-~~~L~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~~--- 179 (352)
T 2jii_A 116 LLAIPTCMGFGVHQ----DKYRFLVLPSL-GRSLQSALDVS--------PKHVLSERSVLQVACRLLDALEFLHENE--- 179 (352)
T ss_dssp TCSCCCCCEEEEET----TTEEEEEEECC-CEEHHHHHHHS--------GGGCCCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred ccCccchhhccccC----CcEEEEEecCC-CcCHHHHHHhC--------CcCCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence 4444321 23789999999 89999999643 2356899999999999999999999998
Q ss_pred ceecCCCCCceecCCCC--ceeeCcccccccCCCCCCc-----cceeeecccccccCcccCCCCCcCccccchhhHHHHH
Q 041249 406 TTHCDLKPSNILLDEEM--VSHVGDFGLARFLPPTHVQ-----TSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILML 478 (789)
Q Consensus 406 ivH~dlk~~Nill~~~~--~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ 478 (789)
|+||||||+||+++.++ .+||+|||+++........ .......||..|+|||.+.+..++.++|||||||++|
T Consensus 180 ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ 259 (352)
T 2jii_A 180 YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCML 259 (352)
T ss_dssp CBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 99999999999999998 9999999999877543211 1122346999999999999989999999999999999
Q ss_pred HHHHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceee
Q 041249 479 ELIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVT 558 (789)
Q Consensus 479 elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~ 558 (789)
||++|+.||.........+......... ...+..+.... .......+.+++..|++.+
T Consensus 260 el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------------------~~~~~~~l~~li~~~l~~d 317 (352)
T 2jii_A 260 KWLYGFLPWTNCLPNTEDIMKQKQKFVD-KPGPFVGPCGH---------------------WIRPSETLQKYLKVVMALT 317 (352)
T ss_dssp HHHHSCCTTGGGTTCHHHHHHHHHHHHH-SCCCEECTTSC---------------------EECCCHHHHHHHHHHHTCC
T ss_pred HHHhCCCCcccCCcCHHHHHHHHHhccC-Chhhhhhhccc---------------------cCCCcHHHHHHHHHHHhCC
Confidence 9999999998543222222222221110 00111111100 0012345668888999999
Q ss_pred EeccCcccccccccc
Q 041249 559 ILDLESLKLAGSILP 573 (789)
Q Consensus 559 ~l~l~s~~~~~~~l~ 573 (789)
+..||+...+...+.
T Consensus 318 p~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 318 YEEKPPYAMLRNNLE 332 (352)
T ss_dssp TTCCCCHHHHHHHHH
T ss_pred hhhCCCHHHHHHHHH
Confidence 999999887754443
No 260
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.97 E-value=4.3e-32 Score=297.07 Aligned_cols=201 Identities=22% Similarity=0.252 Sum_probs=164.6
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc--cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCC-CCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH--HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDY-QGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~~~~ 346 (789)
++|...+.||+|+||.||+|....+++.||||++... .....+.+.+|+++++.++||||+++++++..... .....
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 6888999999999999999999989999999998653 23345678899999999999999999999875431 22346
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+.+ ++.+++. ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 105 ~~lv~e~~~~-~l~~~~~------------~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl 168 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKI 168 (371)
T ss_dssp EEEEEECCSE-EHHHHHH------------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEE
T ss_pred eEEEEEcCCC-CHHHHHh------------hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEE
Confidence 8999999984 7877774 23788999999999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
+|||+++...... ......||..|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 169 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 228 (371)
T 2xrw_A 169 LDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 228 (371)
T ss_dssp CCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEeeccccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 9999998765432 12335689999999999998999999999999999999999999974
No 261
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.97 E-value=2.8e-32 Score=301.32 Aligned_cols=202 Identities=23% Similarity=0.320 Sum_probs=170.2
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCC--------CCccceeeeeeccCCC
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR--------HRNLVKVFTACSGVDY 341 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~~~~~ 341 (789)
++|...+.||+|+||+||+|+...+++.||||+++.. ....+.+.+|++++++++ |+||+++++++.....
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 6788999999999999999999989999999999643 234567889999999985 7889999999863221
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC-CCCCceecCCCCCceecCC
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD-CQPITTHCDLKPSNILLDE 420 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivH~dlk~~Nill~~ 420 (789)
.....++||||+ +|++.+++... ....+++.++..++.|++.||+|||+. + ||||||||+|||++.
T Consensus 116 -~~~~~~lv~e~~-~~~l~~~~~~~--------~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~ 182 (397)
T 1wak_A 116 -NGTHICMVFEVL-GHHLLKWIIKS--------NYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSV 182 (397)
T ss_dssp -TEEEEEEEECCC-CCBHHHHHHHT--------TTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECC
T ss_pred -CCceEEEEEecc-CccHHHHHHhc--------ccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEec
Confidence 123789999999 45666665432 235689999999999999999999998 7 999999999999997
Q ss_pred CC-------------------------------------------------ceeeCcccccccCCCCCCccceeeecccc
Q 041249 421 EM-------------------------------------------------VSHVGDFGLARFLPPTHVQTSSIGVKGSI 451 (789)
Q Consensus 421 ~~-------------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~~gt~ 451 (789)
++ .+||+|||.+....... ....||.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-----~~~~gt~ 257 (397)
T 1wak_A 183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-----TEDIQTR 257 (397)
T ss_dssp CHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-----CSCCSCG
T ss_pred cchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-----ccCCCCC
Confidence 75 89999999998765432 2346899
Q ss_pred cccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCcc
Q 041249 452 GYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIM 490 (789)
Q Consensus 452 ~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~ 490 (789)
.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 258 ~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 296 (397)
T 1wak_A 258 QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 296 (397)
T ss_dssp GGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred cccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 999999999989999999999999999999999999754
No 262
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.97 E-value=2.7e-33 Score=293.91 Aligned_cols=248 Identities=25% Similarity=0.325 Sum_probs=189.2
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceEE
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
.++|...+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++.... ...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK----GGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC------CCE
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----CceE
Confidence 467888999999999999999885 8899999986443 4567899999999999999999999875432 2579
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCc
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGD 428 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 428 (789)
+||||+.+|+|.+++... ....+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|
T Consensus 92 lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~D 160 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSR--------GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSD 160 (278)
T ss_dssp EEECCCTTEEHHHHHHHH--------HHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCCHHHHHHhc--------ccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEee
Confidence 999999999999998643 1223788999999999999999999998 99999999999999999999999
Q ss_pred ccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHHHHHhCCC
Q 041249 429 FGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNFARMALPD 507 (789)
Q Consensus 429 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 507 (789)
||.+....... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+....
T Consensus 161 fg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~~~~~~-- 231 (278)
T 1byg_A 161 FGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGY-- 231 (278)
T ss_dssp CCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHHHHTTTC--
T ss_pred ccccccccccc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCC--
Confidence 99988654332 12357889999999988889999999999999999998 9999974311 11111111100
Q ss_pred chhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 508 HVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 508 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
.+.. ...+...+.+++..|++.++..||+.......+
T Consensus 232 ------~~~~----------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 268 (278)
T 1byg_A 232 ------KMDA----------------------PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 268 (278)
T ss_dssp ------CCCC----------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ------CCCC----------------------cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHH
Confidence 0000 112334566888899999999999988775433
No 263
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.97 E-value=2.7e-32 Score=304.13 Aligned_cols=198 Identities=26% Similarity=0.320 Sum_probs=171.1
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcC------CCCccceeeeeeccCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI------RHRNLVKVFTACSGVDYQ 342 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~~ 342 (789)
...|...+.||+|+||+||+|....+++.||||+++... .....+..|+++++.+ .|+||+++++++....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-- 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--
Confidence 356888999999999999999999899999999996542 3345677788877776 5779999999988765
Q ss_pred CCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC
Q 041249 343 GNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM 422 (789)
Q Consensus 343 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~ 422 (789)
..++||||+. |+|.+++... ....+++..+..++.|++.||+|||+.+ ||||||||+|||++.++
T Consensus 173 ---~~~lv~e~~~-~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~ 237 (429)
T 3kvw_A 173 ---HICMTFELLS-MNLYELIKKN--------KFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQG 237 (429)
T ss_dssp ---EEEEEECCCC-CBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTT
T ss_pred ---eEEEEEeccC-CCHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCC
Confidence 8999999997 6899988654 2345899999999999999999999998 99999999999999988
Q ss_pred c--eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 423 V--SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 423 ~--~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
. +||+|||++....... ....||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 238 ~~~vkL~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 238 RSGIKVIDFGSSCYEHQRV-----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp SCCEEECCCTTCEETTCCC-----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CcceEEeecccceecCCcc-----cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 7 9999999998755432 234689999999999999999999999999999999999999974
No 264
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.97 E-value=1.8e-33 Score=308.08 Aligned_cols=259 Identities=9% Similarity=-0.024 Sum_probs=180.3
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc---hhhHHHHHHH---HHHhcCCCCccceeeeeec-----
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAEC---RALRSIRHRNLVKVFTACS----- 337 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~---~~l~~l~h~niv~l~~~~~----- 337 (789)
..+|...+.||+|+||+||+|.+..+++.||||++..... ...+.+.+|+ +.++. +||||++++..+.
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 4568889999999999999999998999999999976532 3345677784 45555 7999888653332
Q ss_pred --cCCC------------CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHH------HHHHHHHHHHHhh
Q 041249 338 --GVDY------------QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQR------LNIAIDVASALDY 397 (789)
Q Consensus 338 --~~~~------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~------~~i~~~ia~gL~~ 397 (789)
.... ......++||||+. |+|.+++... +..+++..+ ..++.|++.||+|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---------~~~~~~~~~~~~~vk~~i~~qi~~aL~~ 209 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---------DFVYVFRGDEGILALHILTAQLIRLAAN 209 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---------HHSCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---------ccccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 1110 00135799999999 8999999643 123455556 7888999999999
Q ss_pred hhcCCCCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCC--CCcCccccchhhHH
Q 041249 398 LHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG--SEVSTNGDVYSYGI 475 (789)
Q Consensus 398 LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~sfGv 475 (789)
||+.+ |+||||||+|||++.++.+||+|||+++...... ....+|..|+|||.+.+ ..++.++|||||||
T Consensus 210 LH~~~---ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~ 281 (371)
T 3q60_A 210 LQSKG---LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGL 281 (371)
T ss_dssp HHHTT---EEETTCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHH
T ss_pred HHHCC---CccCcCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHH
Confidence 99998 9999999999999999999999999999764321 13457799999999987 67999999999999
Q ss_pred HHHHHHHhcCCCCccccCCccHHHHHHHhCCCc-hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhcccc
Q 041249 476 LMLELIIRKKPSDIMFEGDMNLHNFARMALPDH-VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKA 554 (789)
Q Consensus 476 vl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c 554 (789)
++|||++|+.||......... .+... .......... ......+...+.+++..|
T Consensus 282 il~elltg~~Pf~~~~~~~~~-------~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~li~~~ 336 (371)
T 3q60_A 282 SIYRVWCLFLPFGLVTPGIKG-------SWKRPSLRVPGTDSLA------------------FGSCTPLPDFVKTLIGRF 336 (371)
T ss_dssp HHHHHHHSSCSTTBCCTTCTT-------CCCBCCTTSCCCCSCC------------------CTTSSCCCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCcCccccc-------chhhhhhhhccccccc------------------hhhccCCCHHHHHHHHHH
Confidence 999999999999754221100 00000 0000000000 000012344566888899
Q ss_pred ceeeEeccCcccccccc
Q 041249 555 QKVTILDLESLKLAGSI 571 (789)
Q Consensus 555 ~~l~~l~l~s~~~~~~~ 571 (789)
++.++..|++...+..+
T Consensus 337 L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 337 LNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TCSSTTTCCCHHHHTTS
T ss_pred cCCChhhCCCHHHHhcC
Confidence 99999999999877543
No 265
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.97 E-value=2e-32 Score=294.17 Aligned_cols=208 Identities=28% Similarity=0.385 Sum_probs=173.8
Q ss_pred HhhcCCCCCCcccccCCccEEEEEEc-CCceEEEEEEeccccc--hhhHHHHHHHHHHhcC---CCCccceeeeeeccCC
Q 041249 267 NATDGFSSANLIGTGSFGSVYKGVLD-EGRTTVTVKVFNLHHH--RASRSFIAECRALRSI---RHRNLVKVFTACSGVD 340 (789)
Q Consensus 267 ~~~~~f~~~~~ig~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~ 340 (789)
.+.++|...+.||+|+||.||+|.+. .+++.||+|+++.... .....+.+|+++++.+ +||||+++++++....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 45678999999999999999999994 6789999999865432 2234566777777666 8999999999987332
Q ss_pred CCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC
Q 041249 341 YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE 420 (789)
Q Consensus 341 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~ 420 (789)
.......++||||+. |+|.+++... ....+++.++..++.|++.||+|||+.+ ++||||||+||+++.
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~ 155 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKV--------PEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTS 155 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHS--------CTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECT
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhc--------ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcC
Confidence 223347899999998 6999998654 2345899999999999999999999998 999999999999999
Q ss_pred CCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 421 EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 421 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
++.+||+|||.++...... ......|+..|+|||.+....++.++|||||||++|||++|+.||..
T Consensus 156 ~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 221 (326)
T 1blx_A 156 SGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221 (326)
T ss_dssp TCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCCEEEecCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence 9999999999998765332 22345689999999999999999999999999999999999999974
No 266
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=4e-32 Score=295.41 Aligned_cols=200 Identities=23% Similarity=0.311 Sum_probs=167.7
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCC-CCc
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQ-GND 345 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~~~ 345 (789)
.++|...+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.++++++||||+++++++...... ...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 367888999999999999999999899999999986542 23356788999999999999999999998765311 112
Q ss_pred eEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCcee
Q 041249 346 FKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 346 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
..++||||+. |+|.+++. ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~k 166 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------------LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELK 166 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEE
T ss_pred eEEEEecccc-CCHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEE
Confidence 3599999998 68887763 24899999999999999999999998 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCCC-CCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG-SEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|+|||.++..... .....||..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 167 l~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 226 (353)
T 3coi_A 167 ILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226 (353)
T ss_dssp ECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred EeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999875432 223568999999999877 6789999999999999999999999974
No 267
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.97 E-value=1.1e-32 Score=290.97 Aligned_cols=255 Identities=23% Similarity=0.292 Sum_probs=189.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCC---ceEEEEEEeccc---cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEG---RTTVTVKVFNLH---HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQ 342 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 342 (789)
.++|...+.||+|+||+||+|.+... +..||||+++.. .....+.+.+|++++++++||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 93 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP--- 93 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC---
Confidence 46788899999999999999997532 236999998754 234467899999999999999999999998653
Q ss_pred CCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC
Q 041249 343 GNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM 422 (789)
Q Consensus 343 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~ 422 (789)
..++|+||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||+++.++
T Consensus 94 ---~~~~v~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~ 158 (291)
T 1u46_A 94 ---PMKMVTELAPLGSLLDRLRKH---------QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRD 158 (291)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHH---------GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETT
T ss_pred ---CceeeEecccCCCHHHHHHhc---------cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCC
Confidence 378999999999999998642 245889999999999999999999998 99999999999999999
Q ss_pred ceeeCcccccccCCCCCCcc-ceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHHH
Q 041249 423 VSHVGDFGLARFLPPTHVQT-SSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHNF 500 (789)
Q Consensus 423 ~~kl~Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~~ 500 (789)
.+||+|||.+.......... ......++..|+|||......++.++||||||+++|||++ |+.||.... ..+.
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~ 233 (291)
T 1u46_A 159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN-----GSQI 233 (291)
T ss_dssp EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHH
T ss_pred CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC-----HHHH
Confidence 99999999999876554321 2234557889999999988889999999999999999999 999997321 1122
Q ss_pred HHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 501 ARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 501 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
......... ... ....+...+.+++..|++.++.+||+.......+
T Consensus 234 ~~~~~~~~~----~~~----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 279 (291)
T 1u46_A 234 LHKIDKEGE----RLP----------------------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279 (291)
T ss_dssp HHHHHTSCC----CCC----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHccCC----CCC----------------------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 211111000 000 0012334566888899999999999998775433
No 268
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=3.2e-32 Score=292.87 Aligned_cols=259 Identities=21% Similarity=0.192 Sum_probs=177.1
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc-hhhHHHHHHHH-HHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-RASRSFIAECR-ALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||.||+|....+++.||||+++.... .....+..|+. +++.++||||+++++++.... .
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~-----~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG-----D 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS-----E
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC-----c
Confidence 4688899999999999999999998999999999975532 33445556665 777789999999999998765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC-CCCCceecCCCCCceecCCCCcee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD-CQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
.++||||+.+ +|.+++... .......+++..+..++.|++.||.|||+. + ++||||||+||+++.++.+|
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~-----~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~k 166 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYV-----YSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIK 166 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHH-----HHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEE
T ss_pred eEEEEeecCC-ChHHHHHHH-----HhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEE
Confidence 8999999995 777776421 011235689999999999999999999997 7 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccC----CCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHH
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYG----LGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFA 501 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~ 501 (789)
|+|||+++....... .....||..|+|||.+ ....++.++||||||+++|||++|+.||...... .+..
T Consensus 167 l~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~ 239 (327)
T 3aln_A 167 LCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV----FDQL 239 (327)
T ss_dssp ECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------
T ss_pred EccCCCceecccccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH----HHHH
Confidence 999999987654332 2234689999999998 4566899999999999999999999999742111 0000
Q ss_pred HHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 502 RMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 502 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
..... ...+.+.. .....+...+.+++..|++.++..||+...+...
T Consensus 240 ~~~~~-----~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 240 TQVVK-----GDPPQLSN------------------SEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCC-----SCCCCCCC------------------CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHhc-----CCCCCCCC------------------cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00000 00001100 0011234456788899999999999999877554
No 269
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=1.7e-32 Score=293.69 Aligned_cols=262 Identities=21% Similarity=0.254 Sum_probs=196.0
Q ss_pred cHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeecc
Q 041249 261 SYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSG 338 (789)
Q Consensus 261 ~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 338 (789)
..++.....++|...+.||+|+||.||+|.+.. .||+|+++... ....+.+.+|++++++++||||+++++++..
T Consensus 24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 100 (319)
T 2y4i_B 24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100 (319)
T ss_dssp CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC
T ss_pred ccccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence 345556667899999999999999999999863 49999986542 2334568889999999999999999999987
Q ss_pred CCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec
Q 041249 339 VDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL 418 (789)
Q Consensus 339 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill 418 (789)
.. ..++|+||+.+++|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||++
T Consensus 101 ~~-----~~~iv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~ 163 (319)
T 2y4i_B 101 PP-----HLAIITSLCKGRTLYSVVRDA---------KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFY 163 (319)
T ss_dssp SS-----CEEEECBCCCSEEHHHHTTSS---------CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEE
T ss_pred CC-----ceEEEeecccCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEE
Confidence 65 789999999999999999643 346899999999999999999999998 9999999999999
Q ss_pred CCCCceeeCcccccccCCCCC---CccceeeecccccccCcccCCC---------CCcCccccchhhHHHHHHHHHhcCC
Q 041249 419 DEEMVSHVGDFGLARFLPPTH---VQTSSIGVKGSIGYIAPEYGLG---------SEVSTNGDVYSYGILMLELIIRKKP 486 (789)
Q Consensus 419 ~~~~~~kl~Dfgla~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~~~k~DV~sfGvvl~elltG~~P 486 (789)
+ ++.+||+|||+++...... .........|+..|+|||.+.. ..++.++||||||+++|||++|+.|
T Consensus 164 ~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 242 (319)
T 2y4i_B 164 D-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242 (319)
T ss_dssp C---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred e-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCC
Confidence 8 6799999999987654322 1122233458999999998864 4579999999999999999999999
Q ss_pred CCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccc
Q 041249 487 SDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLK 566 (789)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~ 566 (789)
|.... ........... ..+.... ..+...+.+++..|+..++.+||+..
T Consensus 243 ~~~~~-----~~~~~~~~~~~-----~~~~~~~---------------------~~~~~~l~~li~~~l~~~p~~Rpt~~ 291 (319)
T 2y4i_B 243 FKTQP-----AEAIIWQMGTG-----MKPNLSQ---------------------IGMGKEISDILLFCWAFEQEERPTFT 291 (319)
T ss_dssp SSSCC-----HHHHHHHHHTT-----CCCCCCC---------------------SSCCTTHHHHHHHHHCSSTTTSCCHH
T ss_pred CCCCC-----HHHHHHHhccC-----CCCCCCc---------------------CCCCHHHHHHHHHHhcCChhhCcCHH
Confidence 97321 11111111000 0010000 01122355788899999999999988
Q ss_pred cccccccc
Q 041249 567 LAGSILPH 574 (789)
Q Consensus 567 ~~~~~l~~ 574 (789)
.+...+..
T Consensus 292 ~l~~~l~~ 299 (319)
T 2y4i_B 292 KLMDMLEK 299 (319)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 77554443
No 270
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=3.4e-32 Score=293.68 Aligned_cols=258 Identities=16% Similarity=0.174 Sum_probs=172.6
Q ss_pred hcCCCCC-CcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 269 TDGFSSA-NLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 269 ~~~f~~~-~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
.++|... +.||+|+||+||+|.+..+++.||||++.... ....+....+..+.||||+++++++.... .+....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMH-HGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCceE
Confidence 4678874 47999999999999999899999999985432 22223334456679999999999986532 122358
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC---CCce
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE---EMVS 424 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~---~~~~ 424 (789)
++||||+.+|+|.+++... ....+++.++..++.|++.||+|||+.+ |+||||||+||+++. ++.+
T Consensus 102 ~lv~e~~~gg~L~~~l~~~--------~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~ 170 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQER--------GDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVL 170 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC---------CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCE
T ss_pred EEEEeccCCCCHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceE
Confidence 9999999999999999754 3356899999999999999999999998 999999999999986 4569
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHh
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 504 (789)
||+|||.++...... .....||..|+|||.+....++.++||||||+++|||++|+.||......... ......
T Consensus 171 kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~ 244 (336)
T 3fhr_A 171 KLTDFGFAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--PGMKRR 244 (336)
T ss_dssp EECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------
T ss_pred EEeccccceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh--hhHHHh
Confidence 999999998765432 22356899999999998889999999999999999999999999743221100 000000
Q ss_pred CCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 505 LPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 505 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.......... .....+...+.+++..|.+.++.+|++...+..+
T Consensus 245 ~~~~~~~~~~-----------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 245 IRLGQYGFPN-----------------------PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ------CCCT-----------------------TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhccccccCc-----------------------hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000000 0001233456678889999999999999877543
No 271
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.97 E-value=1.2e-31 Score=289.44 Aligned_cols=198 Identities=23% Similarity=0.322 Sum_probs=170.9
Q ss_pred hcCCCCCCcccccCCccEEEEEE-cCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCc------cceeeeeeccCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVL-DEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRN------LVKVFTACSGVDY 341 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~ 341 (789)
.++|...+.||+|+||+||+|.+ ..+++.||||+++... .....+.+|+++++.++|++ ++++++++....
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~- 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG- 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT-
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC-
Confidence 36888999999999999999998 5578999999986432 34567888999999887654 999999987765
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC-
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE- 420 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~- 420 (789)
..++||||+ +++|.+++... ....+++.++..++.|++.||+|||+.+ |+||||||+||+++.
T Consensus 91 ----~~~lv~e~~-~~~l~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~ 154 (339)
T 1z57_A 91 ----HICIVFELL-GLSTYDFIKEN--------GFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQS 154 (339)
T ss_dssp ----EEEEEEECC-CCBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCC
T ss_pred ----cEEEEEcCC-CCCHHHHHHhc--------CCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEecc
Confidence 899999999 78999998644 2346889999999999999999999998 999999999999987
Q ss_pred ------------------CCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH
Q 041249 421 ------------------EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII 482 (789)
Q Consensus 421 ------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt 482 (789)
++.+||+|||.++...... ....||..|+|||.+.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 229 (339)
T 1z57_A 155 DYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 229 (339)
T ss_dssp CEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHH
T ss_pred ccccccCCccccccccccCCCceEeeCcccccCcccc-----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHh
Confidence 6689999999998755432 23468999999999999899999999999999999999
Q ss_pred hcCCCCc
Q 041249 483 RKKPSDI 489 (789)
Q Consensus 483 G~~P~~~ 489 (789)
|+.||..
T Consensus 230 g~~pf~~ 236 (339)
T 1z57_A 230 GFTVFPT 236 (339)
T ss_dssp SSCSCCC
T ss_pred CCCCCCC
Confidence 9999974
No 272
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.97 E-value=6.5e-32 Score=284.79 Aligned_cols=251 Identities=22% Similarity=0.245 Sum_probs=197.1
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||+||+|....+++.||+|++.... ......+.+|++++++++||||+++++++.... .
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 95 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS-----S 95 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----E
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC-----e
Confidence 467889999999999999999998889999999986543 334578999999999999999999999987755 7
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC---Cc
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE---MV 423 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~---~~ 423 (789)
.++|+||+.+++|.+++... ..+++.++..++.|++.||+|||+.+ ++||||||+||+++.+ +.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~ 162 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKR----------KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCD 162 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHH----------SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCC
T ss_pred EEEEEEccCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCccc
Confidence 89999999999999988543 46899999999999999999999998 9999999999999754 47
Q ss_pred eeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHH
Q 041249 424 SHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARM 503 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~ 503 (789)
+||+|||++........ .....|+..|+|||.+.+ .++.++||||||+++|+|++|+.||.... ..+..+.
T Consensus 163 ~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~ 233 (287)
T 2wei_A 163 IKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN-----EYDILKR 233 (287)
T ss_dssp EEECSTTGGGTBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH
T ss_pred EEEeccCcceeecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC-----HHHHHHH
Confidence 99999999987654432 123458899999998765 58999999999999999999999997421 1111111
Q ss_pred hCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 504 ALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 504 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
.... ..... ......+...+.+++..|++.++..|++......
T Consensus 234 ~~~~--------~~~~~----------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 234 VETG--------KYAFD----------------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHC--------CCCCC----------------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHcC--------CCCCC----------------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1000 00000 0000122345668888999999999999877643
No 273
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.97 E-value=2.8e-32 Score=303.32 Aligned_cols=278 Identities=19% Similarity=0.205 Sum_probs=193.8
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCC-CCCceEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDY-QGNDFKA 348 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~~ 348 (789)
..|...+.||+|+||.||+|.+..+++.||||++.... ....+|++++++++||||+++++++..... ......+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 35778899999999999999999889999999986432 223469999999999999999998854321 1222467
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC-CceeeC
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE-MVSHVG 427 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~ 427 (789)
+||||+.+ ++.+.+... ......+++..+..++.|++.||+|||+.+ |+||||||+|||++.+ +.+||+
T Consensus 130 lv~e~~~~-~l~~~~~~~------~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~ 199 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHY------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLC 199 (420)
T ss_dssp EEEECCCE-EHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEEC
T ss_pred eehhcccc-cHHHHHHHH------hhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEec
Confidence 99999996 555554321 112457899999999999999999999988 9999999999999965 578999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCC-CcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCC
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALP 506 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 506 (789)
|||+++....... .....||..|+|||++.+. .++.++|||||||++|||++|+.||..... ...+...++..-.
T Consensus 200 DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~ 275 (420)
T 1j1b_A 200 DFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGT 275 (420)
T ss_dssp CCTTCEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCS
T ss_pred cchhhhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCC
Confidence 9999997654432 2234689999999998765 699999999999999999999999974211 1122222221111
Q ss_pred Cc--hhhhccCCcccC-hhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 507 DH--VMDIVDSTLLND-VEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 507 ~~--~~~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.. .....++..... ... .....+...........+.+++.+|...++..|++..++..+
T Consensus 276 p~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 276 PTREQIREMNPNYTEFKFPQ------IKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCHHHHHHHCSCCCCCCCCC------CCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHhhChhhhhhccCc------cCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 10 000111111000 000 000000000001223456788899999999999999876543
No 274
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=4e-32 Score=288.24 Aligned_cols=259 Identities=20% Similarity=0.244 Sum_probs=191.2
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCC--------
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVD-------- 340 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------- 340 (789)
.++|...+.||+|+||.||+|....+++.||||.++.. ....+.+.+|++++++++||||+++++++....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 45788899999999999999999889999999998643 334567899999999999999999999876532
Q ss_pred CCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC
Q 041249 341 YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE 420 (789)
Q Consensus 341 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~ 420 (789)
.......++||||+.+|+|.+++... ...+++.++..++.|++.||+|||+.+ ++||||||+||+++.
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~ 151 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE---------NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDE 151 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS---------CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECT
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc---------ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcC
Confidence 11234689999999999999999643 345788899999999999999999998 999999999999999
Q ss_pred CCceeeCcccccccCCCCCC------------ccceeeecccccccCcccCCCC-CcCccccchhhHHHHHHHHHhcCCC
Q 041249 421 EMVSHVGDFGLARFLPPTHV------------QTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPS 487 (789)
Q Consensus 421 ~~~~kl~Dfgla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfGvvl~elltG~~P~ 487 (789)
++.+||+|||.+........ ........|+..|+|||.+.+. .++.++|||||||++|||++ ||
T Consensus 152 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~ 228 (303)
T 1zy4_A 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PF 228 (303)
T ss_dssp TSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CC
T ss_pred CCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---cc
Confidence 99999999999987653321 1122345689999999998764 68999999999999999998 55
Q ss_pred CccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccc
Q 041249 488 DIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKL 567 (789)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~ 567 (789)
.... ......+...... ....+.+ ...+...+.+++..|++.++..||+...
T Consensus 229 ~~~~----~~~~~~~~~~~~~--~~~~~~~----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ 280 (303)
T 1zy4_A 229 STGM----ERVNILKKLRSVS--IEFPPDF----------------------DDNKMKVEKKIIRLLIDHDPNKRPGART 280 (303)
T ss_dssp SSHH----HHHHHHHHHHSTT--CCCCTTC----------------------CTTTSHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCch----hHHHHHHhccccc--cccCccc----------------------cccchHHHHHHHHHHHhcCcccCcCHHH
Confidence 4211 1111111110000 0000111 0122334567888999999999999987
Q ss_pred cccc
Q 041249 568 AGSI 571 (789)
Q Consensus 568 ~~~~ 571 (789)
...+
T Consensus 281 ll~h 284 (303)
T 1zy4_A 281 LLNS 284 (303)
T ss_dssp HHHS
T ss_pred HhCC
Confidence 7543
No 275
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=8.3e-32 Score=309.38 Aligned_cols=278 Identities=20% Similarity=0.223 Sum_probs=201.6
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccc-cchhhHHHHHHHHHHhcCCCCccceeeeeeccCCC-CCCceE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLH-HHRASRSFIAECRALRSIRHRNLVKVFTACSGVDY-QGNDFK 347 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~ 347 (789)
++|...+.||+|+||+||+|.+..+++.||||+++.. .......+.+|++++++++||||+++++++..... ......
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6899999999999999999999889999999998754 33445779999999999999999999999765321 223467
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCc---e
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMV---S 424 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~---~ 424 (789)
++||||+.+|+|.+++... .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +
T Consensus 94 ~LVmEy~~ggsL~~~L~~~-------~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~v 163 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQF-------ENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIH 163 (676)
T ss_dssp CCEEECCSSCBHHHHHHSS-------SCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEE
T ss_pred EEEEEeCCCCCHHHHHHhc-------ccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeE
Confidence 9999999999999999754 22346889999999999999999999998 999999999999997664 8
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHh
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 504 (789)
||+|||.+........ .....||..|+|||.+.+..++.++|||||||++|||++|+.||... .....|....
T Consensus 164 KL~DFG~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~----~~~~~~~~~i 236 (676)
T 3qa8_A 164 KIIDLGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN----WQPVQWHGKV 236 (676)
T ss_dssp EECSCCCCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS----CHHHHSSTTC
T ss_pred EEcccccccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc----cchhhhhhhh
Confidence 9999999998765442 23456899999999999999999999999999999999999999632 1222222111
Q ss_pred CCCchhh-hccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 505 LPDHVMD-IVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 505 ~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
....... .......+... .......+..........+.+++..|...+|..||+..+...
T Consensus 237 ~~~~~~~~~~~~~l~g~~~------~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~ 297 (676)
T 3qa8_A 237 REKSNEHIVVYDDLTGAVK------FSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPN 297 (676)
T ss_dssp C------CCSCCCCSSSCC------CCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCC
T ss_pred hcccchhhhhhhhhccccc------cccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhc
Confidence 1111000 00100000000 000000001112234566778999999999999999987643
No 276
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=296.40 Aligned_cols=210 Identities=22% Similarity=0.302 Sum_probs=155.0
Q ss_pred CCCC-CCcccccCCccEEEEEEc--CCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCceE
Q 041249 271 GFSS-ANLIGTGSFGSVYKGVLD--EGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 271 ~f~~-~~~ig~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
.|.. .++||+|+||+||+|.+. .+++.||||++.... ....+.+|++++++++||||+++++++.... ....
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---~~~~ 95 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHA---DRKV 95 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETT---TTEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCC---CCeE
Confidence 4554 568999999999999976 457899999986432 3357889999999999999999999985422 2378
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec----CCCCc
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL----DEEMV 423 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill----~~~~~ 423 (789)
++||||+. |+|.+++....... .......+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~-~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASK-ANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC--------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEeCCC-CCHHHHHHHhcccc-ccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCc
Confidence 99999998 47777764320000 0112235899999999999999999999998 9999999999999 77889
Q ss_pred eeeCcccccccCCCCCC-ccceeeecccccccCcccCCCC-CcCccccchhhHHHHHHHHHhcCCCCcc
Q 041249 424 SHVGDFGLARFLPPTHV-QTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIM 490 (789)
Q Consensus 424 ~kl~Dfgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfGvvl~elltG~~P~~~~ 490 (789)
+||+|||+++....... ........||..|+|||.+.+. .++.++|||||||++|||++|+.||...
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99999999998764332 1223346789999999998874 5899999999999999999999999743
No 277
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.97 E-value=3.2e-32 Score=300.39 Aligned_cols=278 Identities=21% Similarity=0.198 Sum_probs=191.3
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCccceeeeeeccCCC-CCCceEE
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNLVKVFTACSGVDY-QGNDFKA 348 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~~ 348 (789)
..|...+.||+|+||.||+|.+..+++ ||+|.+..... ...+|+++++.++||||+++++++..... ......+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 468889999999999999999985555 88887743322 22369999999999999999999865442 2233478
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecC-CCCceeeC
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLD-EEMVSHVG 427 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~ 427 (789)
+||||+.++.+....... .....+++..+..++.|++.||+|||+.+ |+||||||+||+++ .++.+||+
T Consensus 115 lv~e~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~ 184 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYA-------KLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLI 184 (394)
T ss_dssp EEEECCSEEHHHHHHHHH-------HTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEEC
T ss_pred EEeeccCccHHHHHHHHH-------hhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEe
Confidence 999999975444332111 12356899999999999999999999998 99999999999999 78999999
Q ss_pred cccccccCCCCCCccceeeecccccccCcccCCCC-CcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCC
Q 041249 428 DFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS-EVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMALP 506 (789)
Q Consensus 428 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 506 (789)
|||+++........ ....||..|+|||.+.+. .++.++|||||||++|||++|+.||..... ...+...++..-.
T Consensus 185 DFG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~ 260 (394)
T 4e7w_A 185 DFGSAKILIAGEPN---VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIKVLGT 260 (394)
T ss_dssp CCTTCEECCTTCCC---CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCC
T ss_pred eCCCcccccCCCCC---cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCC
Confidence 99999887544322 234689999999998765 589999999999999999999999974211 1112222221111
Q ss_pred Cc--hhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 507 DH--VMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 507 ~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.. .....++....... .......+...........+.+++.+|.+.++..|++..++..+
T Consensus 261 p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 261 PSREQIKTMNPNYMEHKF-----PQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CCHHHHHHHCGGGSSSCC-----CCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHhhChhhhhhcc-----ccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 10 00001110000000 00000000000011234467788999999999999998877543
No 278
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=6e-30 Score=275.67 Aligned_cols=142 Identities=27% Similarity=0.351 Sum_probs=103.7
Q ss_pred CCCCCccCCcCccCC------ccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCC
Q 041249 6 SNRLSGNIPPSIGNL------KKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRN 79 (789)
Q Consensus 6 ~n~~~~~~p~~~~~l------~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 79 (789)
.+.+. .+|..+... .+++.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 13 ~~~l~-~lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 88 (332)
T 2ft3_A 13 IPDLD-SLPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNN 88 (332)
T ss_dssp -------------CCCCSSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCccc-cCCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCC
Confidence 34444 566555433 37899999999988 7787664 68999999999998777778999999999999999
Q ss_pred cCCCCCcccccCCCCCCEEeccCCCCCCcCCccccCCcccccccccCCCCCccceeecCCcccCCCchhhhcCcccccEE
Q 041249 80 QFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENL 159 (789)
Q Consensus 80 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~l~~l~ls~N~l~~~~p~~~~~~~~l~~l 159 (789)
++++..|..|+.+++|++|+|++|+++ .+|..+. ++ |++|++++|++++..+..+..+++|+.|
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~-------------L~~L~l~~n~i~~~~~~~~~~l~~L~~L 152 (332)
T 2ft3_A 89 KISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SS-------------LVELRIHDNRIRKVPKGVFSGLRNMNCI 152 (332)
T ss_dssp CCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TT-------------CCEEECCSSCCCCCCSGGGSSCSSCCEE
T ss_pred ccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--cc-------------CCEEECCCCccCccCHhHhCCCccCCEE
Confidence 998777888999999999999999988 5665443 33 4555666666776666678888899999
Q ss_pred ecccCCCC
Q 041249 160 NLSYNDLE 167 (789)
Q Consensus 160 ~ls~N~~~ 167 (789)
++++|+++
T Consensus 153 ~l~~n~l~ 160 (332)
T 2ft3_A 153 EMGGNPLE 160 (332)
T ss_dssp ECCSCCCB
T ss_pred ECCCCccc
Confidence 99888774
No 279
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=7.1e-30 Score=275.10 Aligned_cols=149 Identities=20% Similarity=0.250 Sum_probs=126.5
Q ss_pred CEEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCc
Q 041249 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQ 80 (789)
Q Consensus 1 ~l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 80 (789)
++++++|+++ .+|..+. ++|++|++++|.|++..|+.|..+++|++|+|++|+|++..|..|+.+++|++|+|++|+
T Consensus 37 ~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 113 (332)
T 2ft3_A 37 VVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113 (332)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSC
T ss_pred EEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCc
Confidence 3789999998 8888874 689999999999998888899999999999999999998889999999999999999999
Q ss_pred CCCCCcccccCCCCCCEEeccCCCCCCcCCccccCCcccccccccCCCCCccceeecCCcccCCCchhhhcCcccccEEe
Q 041249 81 FRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENLN 160 (789)
Q Consensus 81 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~l~~l~ls~N~l~~~~p~~~~~~~~l~~l~ 160 (789)
++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|++.. .+..|..+..+ +|+.|+
T Consensus 114 l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~-----------~~~~~~~~~~l-~L~~L~ 178 (332)
T 2ft3_A 114 LV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN-----------SGFEPGAFDGL-KLNYLR 178 (332)
T ss_dssp CC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG-----------GGSCTTSSCSC-CCSCCB
T ss_pred CC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc-----------CCCCcccccCC-ccCEEE
Confidence 98 7887766 799999999999997666778998888887777766542 12456666666 778888
Q ss_pred cccCCCC
Q 041249 161 LSYNDLE 167 (789)
Q Consensus 161 ls~N~~~ 167 (789)
+++|+++
T Consensus 179 l~~n~l~ 185 (332)
T 2ft3_A 179 ISEAKLT 185 (332)
T ss_dssp CCSSBCS
T ss_pred CcCCCCC
Confidence 8777664
No 280
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=2.6e-32 Score=292.60 Aligned_cols=244 Identities=18% Similarity=0.211 Sum_probs=196.7
Q ss_pred HhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccch------hhHHHHHHHHHHhcCC--CCccceeeeeecc
Q 041249 267 NATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR------ASRSFIAECRALRSIR--HRNLVKVFTACSG 338 (789)
Q Consensus 267 ~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~l~~~~~~ 338 (789)
...++|...+.||+|+||.||+|.+..+++.||||+++..... ....+..|++++++++ |+||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3457899999999999999999999989999999999655322 2355778999999996 5999999999987
Q ss_pred CCCCCCceEEEEeeccCC-CChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCcee
Q 041249 339 VDYQGNDFKALVYEFMQN-GSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNIL 417 (789)
Q Consensus 339 ~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nil 417 (789)
.. ..++|+|++.. ++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+
T Consensus 120 ~~-----~~~lv~e~~~~~~~L~~~l~~~----------~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIl 181 (320)
T 3a99_A 120 PD-----SFVLILERPEPVQDLFDFITER----------GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENIL 181 (320)
T ss_dssp SS-----EEEEEEECCSSEEEHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEE
T ss_pred CC-----cEEEEEEcCCCCccHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEE
Confidence 65 78999999986 8999998643 46889999999999999999999998 999999999999
Q ss_pred cC-CCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCc-CccccchhhHHHHHHHHHhcCCCCccccCCc
Q 041249 418 LD-EEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV-STNGDVYSYGILMLELIIRKKPSDIMFEGDM 495 (789)
Q Consensus 418 l~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~sfGvvl~elltG~~P~~~~~~~~~ 495 (789)
++ +++.+||+|||+++...... .....||..|+|||.+....+ +.++||||||+++|||++|+.||...
T Consensus 182 l~~~~~~~kL~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~----- 252 (320)
T 3a99_A 182 IDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----- 252 (320)
T ss_dssp EETTTTEEEECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-----
T ss_pred EeCCCCCEEEeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh-----
Confidence 99 78999999999998876443 223568999999999877665 78899999999999999999999631
Q ss_pred cHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 496 NLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
........ ... ..+...+.+++..|++.++.+||+...+...
T Consensus 253 --~~~~~~~~----------~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 253 --EEIIRGQV----------FFR----------------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp --HHHHHCCC----------CCS----------------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --hhhhcccc----------ccc----------------------ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111000 000 0122345678889999999999999877543
No 281
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=5.4e-32 Score=289.65 Aligned_cols=253 Identities=20% Similarity=0.195 Sum_probs=176.9
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccch--hhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR--ASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||.||+|.+..+++.||||++...... ..+.+.++..+++.++||||+++++++.... .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~-----~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT-----D 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----E
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC-----c
Confidence 46788899999999999999999989999999999755322 2344555666788889999999999998765 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC-CCCCceecCCCCCceecCCCCcee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD-CQPITTHCDLKPSNILLDEEMVSH 425 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivH~dlk~~Nill~~~~~~k 425 (789)
.++||||+ ++.+..+... ....+++..+..++.|++.||+|||+. + ++||||||+||+++.++.+|
T Consensus 99 ~~lv~e~~-~~~~~~l~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~k 165 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKR---------MQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIK 165 (318)
T ss_dssp EEEEECCC-SEEHHHHHHH---------HTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEE
T ss_pred EEEEEecc-CCcHHHHHHH---------hccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEE
Confidence 99999999 3445444422 134689999999999999999999985 7 99999999999999999999
Q ss_pred eCcccccccCCCCCCccceeeecccccccCcccCC-----CCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHH
Q 041249 426 VGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGL-----GSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNF 500 (789)
Q Consensus 426 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~ 500 (789)
|+|||.+........ .....|+..|+|||.+. ...++.++||||||+++|||++|+.||.........+...
T Consensus 166 l~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 242 (318)
T 2dyl_A 166 LCDFGISGRLVDDKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV 242 (318)
T ss_dssp ECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH
T ss_pred EEECCCchhccCCcc---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHH
Confidence 999999987654332 22346899999999984 4568999999999999999999999997422111111111
Q ss_pred HHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 501 ARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 501 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
.+.. + +.+.. ...+...+.+++..|++.++..||+...+..+
T Consensus 243 ~~~~-~--------~~~~~--------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 243 LQEE-P--------PLLPG--------------------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHSC-C--------CCCCS--------------------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred hccC-C--------CCCCc--------------------cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1110 0 00000 00123345678889999999999999877554
No 282
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.1e-29 Score=273.30 Aligned_cols=129 Identities=25% Similarity=0.286 Sum_probs=110.8
Q ss_pred CccCCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEe
Q 041249 20 LKKLVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLT 99 (789)
Q Consensus 20 l~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 99 (789)
..+++.++++++.++ .+|..+. +.|++|+|++|+|++..+..|+.+++|++|+|++|++++..|..|+.+++|++|+
T Consensus 30 ~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 30 QCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred cCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 348999999999998 7887665 7899999999999987777899999999999999999977799999999999999
Q ss_pred ccCCCCCCcCCccccCCcccccccccCCCCCccceeecCCcccCCCchhhhcCcccccEEecccCCCC
Q 041249 100 VSGNILQGEIPSTLGSCIKLEILEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLE 167 (789)
Q Consensus 100 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~l~~l~ls~N~l~~~~p~~~~~~~~l~~l~ls~N~~~ 167 (789)
+++|+++ .+|..+. + .|+.|++++|.+++..+..+..+++|+.|++++|+++
T Consensus 107 Ls~n~l~-~l~~~~~--~-------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 158 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--K-------------TLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLK 158 (330)
T ss_dssp CCSSCCS-BCCSSCC--T-------------TCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCC
T ss_pred CCCCcCC-ccChhhc--c-------------cccEEECCCCcccccCHhHhcCCccccEEECCCCcCC
Confidence 9999998 6676543 2 4556667777788777888999999999999999774
No 283
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.97 E-value=5e-32 Score=316.85 Aligned_cols=258 Identities=20% Similarity=0.283 Sum_probs=197.6
Q ss_pred HHHhhcCCCCCCcccccCCccEEEEEEcCC---ceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 041249 265 LHNATDGFSSANLIGTGSFGSVYKGVLDEG---RTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVD 340 (789)
Q Consensus 265 ~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 340 (789)
.....++|...+.||+|+||.||+|.+..+ +..||||.++... ....+.+.+|+.++++++||||+++++++.+ .
T Consensus 385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~ 463 (656)
T 2j0j_A 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 463 (656)
T ss_dssp TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-C
Confidence 334456777888999999999999998633 5679999986543 3345779999999999999999999999843 2
Q ss_pred CCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC
Q 041249 341 YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE 420 (789)
Q Consensus 341 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~ 420 (789)
..++||||+.+|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 464 -----~~~lv~E~~~~g~L~~~l~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~ 526 (656)
T 2j0j_A 464 -----PVWIIMELCTLGELRSFLQVR---------KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSS 526 (656)
T ss_dssp -----SCEEEEECCTTCBHHHHHHHT---------TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEE
T ss_pred -----ceEEEEEcCCCCcHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeC
Confidence 579999999999999999643 245899999999999999999999998 999999999999999
Q ss_pred CCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH-hcCCCCccccCCccHHH
Q 041249 421 EMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMNLHN 499 (789)
Q Consensus 421 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~~~~ 499 (789)
++.+||+|||+++........ ......++..|+|||.+....++.++|||||||++|||++ |..||..... .....
T Consensus 527 ~~~vkL~DFG~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--~~~~~ 603 (656)
T 2j0j_A 527 NDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIG 603 (656)
T ss_dssp TTEEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHH
T ss_pred CCCEEEEecCCCeecCCCcce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--HHHHH
Confidence 999999999999987554322 1223456789999999988899999999999999999997 9999973211 11111
Q ss_pred HHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccccc
Q 041249 500 FARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSILP 573 (789)
Q Consensus 500 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l~ 573 (789)
.+...... .. ...+...+.+++..|++.++..||+.......+.
T Consensus 604 ~i~~~~~~--------~~----------------------~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 604 RIENGERL--------PM----------------------PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp HHHHTCCC--------CC----------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHcCCCC--------CC----------------------CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11111100 00 1123445668889999999999999887754433
No 284
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=2.4e-31 Score=292.40 Aligned_cols=208 Identities=25% Similarity=0.276 Sum_probs=173.6
Q ss_pred cHHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCC-CC-----ccceeee
Q 041249 261 SYQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR-HR-----NLVKVFT 334 (789)
Q Consensus 261 ~~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~ 334 (789)
.+.+.....++|...+.||+|+||+||+|....+++.||||+++... .....+..|+++++.++ |+ +|+++++
T Consensus 45 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~ 123 (382)
T 2vx3_A 45 IVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKR 123 (382)
T ss_dssp CCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred EeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeee
Confidence 33444455689999999999999999999999899999999996432 33466778888888874 55 4999999
Q ss_pred eeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCC
Q 041249 335 ACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPS 414 (789)
Q Consensus 335 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~ 414 (789)
++.... ..++||||+. |+|.+++... ....+++..+..++.|++.||+|||++ ..+||||||||+
T Consensus 124 ~~~~~~-----~~~lv~e~~~-~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~ 188 (382)
T 2vx3_A 124 HFMFRN-----HLCLVFEMLS-YNLYDLLRNT--------NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPE 188 (382)
T ss_dssp EEEETT-----EEEEEEECCC-CBHHHHHHHT--------TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGG
T ss_pred eeccCC-----ceEEEEecCC-CCHHHHHhhc--------CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcc
Confidence 987765 8999999996 5999998654 234589999999999999999999953 123999999999
Q ss_pred ceecC--CCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 415 NILLD--EEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 415 Nill~--~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
|||++ .++.+||+|||+++...... ....||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 189 NIll~~~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 189 NILLCNPKRSAIKIVDFGSSCQLGQRI-----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp GEEESSTTSCCEEECCCTTCEETTCCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cEEEecCCCCcEEEEeccCceeccccc-----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99995 47889999999998875432 235689999999999999999999999999999999999999974
No 285
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.4e-32 Score=291.73 Aligned_cols=245 Identities=19% Similarity=0.204 Sum_probs=188.4
Q ss_pred HHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc------hhhHHHHHHHHHHhcC----CCCccceeee
Q 041249 265 LHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH------RASRSFIAECRALRSI----RHRNLVKVFT 334 (789)
Q Consensus 265 ~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l----~h~niv~l~~ 334 (789)
.....++|...+.||+|+||.||+|....+++.||||++..... .....+..|++++.++ +|+||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 34446789999999999999999999988999999999965432 1233466788888888 8999999999
Q ss_pred eeccCCCCCCceEEEEeec-cCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCC
Q 041249 335 ACSGVDYQGNDFKALVYEF-MQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKP 413 (789)
Q Consensus 335 ~~~~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~ 413 (789)
++.... ..++|+|+ +.+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||
T Consensus 106 ~~~~~~-----~~~~v~e~~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp 167 (312)
T 2iwi_A 106 WFETQE-----GFMLVLERPLPAQDLFDYITEK----------GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKD 167 (312)
T ss_dssp EC----------CEEEEECCSSEEEHHHHHHHH----------CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSG
T ss_pred EEecCC-----eEEEEEEecCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCh
Confidence 987655 78999999 7889999998643 45899999999999999999999998 99999999
Q ss_pred CceecC-CCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCc-CccccchhhHHHHHHHHHhcCCCCccc
Q 041249 414 SNILLD-EEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEV-STNGDVYSYGILMLELIIRKKPSDIMF 491 (789)
Q Consensus 414 ~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~sfGvvl~elltG~~P~~~~~ 491 (789)
+||+++ .++.+||+|||.++...... .....|+..|+|||.+....+ +.++||||||+++|||++|+.||...
T Consensus 168 ~Nil~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~- 242 (312)
T 2iwi_A 168 ENILIDLRRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD- 242 (312)
T ss_dssp GGEEEETTTTEEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-
T ss_pred hhEEEeCCCCeEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh-
Confidence 999999 88999999999998876543 223558999999999877666 45899999999999999999999631
Q ss_pred cCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccc
Q 041249 492 EGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~ 570 (789)
....... ..+. ..+...+.+++..|++.++..|++...+..
T Consensus 243 ------~~~~~~~----------~~~~----------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 243 ------QEILEAE----------LHFP----------------------AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ------HHHHHTC----------CCCC----------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ------HHHhhhc----------cCCc----------------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111100 0000 012234567888999999999999987754
No 286
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=4.1e-31 Score=287.28 Aligned_cols=198 Identities=23% Similarity=0.298 Sum_probs=168.7
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCc-eEEEEEEeccccchhhHHHHHHHHHHhcCCCCc------cceeeeeeccCCC
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGR-TTVTVKVFNLHHHRASRSFIAECRALRSIRHRN------LVKVFTACSGVDY 341 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~ 341 (789)
.++|...+.||+|+||+||+|....++ +.||+|+++.. ......+..|++++++++|++ ++.+++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~- 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG- 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT-
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC-
Confidence 368889999999999999999997666 79999999643 234567888999999987766 888888887655
Q ss_pred CCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceec---
Q 041249 342 QGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILL--- 418 (789)
Q Consensus 342 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill--- 418 (789)
..++||||+ ++++.+++... ....+++.++..++.|++.||+|||+.+ |+||||||+||++
T Consensus 96 ----~~~lv~e~~-~~~l~~~l~~~--------~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~ 159 (355)
T 2eu9_A 96 ----HMCIAFELL-GKNTFEFLKEN--------NFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNS 159 (355)
T ss_dssp ----EEEEEEECC-CCBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCC
T ss_pred ----eEEEEEecc-CCChHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecc
Confidence 889999999 56777776543 2346899999999999999999999988 9999999999999
Q ss_pred ----------------CCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHH
Q 041249 419 ----------------DEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELII 482 (789)
Q Consensus 419 ----------------~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~ellt 482 (789)
+.++.+||+|||.++...... ....||..|+|||.+.+..++.++|||||||++|||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 234 (355)
T 2eu9_A 160 EFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234 (355)
T ss_dssp CEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh
Confidence 567899999999998755432 23468999999999999999999999999999999999
Q ss_pred hcCCCCc
Q 041249 483 RKKPSDI 489 (789)
Q Consensus 483 G~~P~~~ 489 (789)
|+.||..
T Consensus 235 g~~pf~~ 241 (355)
T 2eu9_A 235 GFTLFQT 241 (355)
T ss_dssp SSCSCCC
T ss_pred CCCCCCC
Confidence 9999974
No 287
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=1.8e-31 Score=292.43 Aligned_cols=203 Identities=20% Similarity=0.284 Sum_probs=170.6
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCC-----------CCccceeeeeec
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR-----------HRNLVKVFTACS 337 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~ 337 (789)
.++|...+.||+|+||+||+|....+++.||||++.... .....+.+|++++++++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 357888999999999999999998899999999986432 34567888999999886 899999999987
Q ss_pred cCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC-CCCCceecCCCCCce
Q 041249 338 GVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD-CQPITTHCDLKPSNI 416 (789)
Q Consensus 338 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivH~dlk~~Ni 416 (789)
.... .....++||||+ +++|.+++... ....+++..+..++.|++.||+|||+. + |+||||||+||
T Consensus 97 ~~~~-~~~~~~lv~e~~-~~~L~~~~~~~--------~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NI 163 (373)
T 1q8y_A 97 HKGP-NGVHVVMVFEVL-GENLLALIKKY--------EHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENV 163 (373)
T ss_dssp EEET-TEEEEEEEECCC-CEEHHHHHHHT--------TTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGE
T ss_pred ccCC-CCceEEEEEecC-CCCHHHHHHHh--------hccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHe
Confidence 5431 223679999999 88999998653 234589999999999999999999997 8 99999999999
Q ss_pred ecC------CCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCcc
Q 041249 417 LLD------EEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIM 490 (789)
Q Consensus 417 ll~------~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~ 490 (789)
+++ ..+.+||+|||++....... ....||..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 164 ll~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 164 LMEIVDSPENLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp EEEEEETTTTEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred EEeccCCCcCcceEEEcccccccccCCCC-----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 994 45589999999998765432 2346899999999999989999999999999999999999999743
No 288
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=2.1e-31 Score=297.54 Aligned_cols=257 Identities=19% Similarity=0.201 Sum_probs=182.4
Q ss_pred CCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCCceEEEEe
Q 041249 273 SSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGNDFKALVY 351 (789)
Q Consensus 273 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 351 (789)
...+.||+|+||+||.+.. .+++.||||++... ..+.+.+|++++.++ +||||+++++++.... ..++||
T Consensus 18 ~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~-----~~~lv~ 88 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDR-----FLYIAL 88 (434)
T ss_dssp EEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS-----EEEEEE
T ss_pred eccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC-----eEEEEE
Confidence 4467899999999986544 47899999998643 235678899999886 8999999999987655 899999
Q ss_pred eccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCC----------
Q 041249 352 EFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEE---------- 421 (789)
Q Consensus 352 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~---------- 421 (789)
||+. |+|.+++....... ......++..+..++.||+.||+|||+.+ |+||||||+|||++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSD---ENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp CCCS-EEHHHHHHTC---------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred ecCC-CCHHHHHhccCCCc---hhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccC
Confidence 9996 69999997542111 00111233456789999999999999998 9999999999999653
Q ss_pred ---CceeeCcccccccCCCCCCc--cceeeecccccccCcccCCC-------CCcCccccchhhHHHHHHHHH-hcCCCC
Q 041249 422 ---MVSHVGDFGLARFLPPTHVQ--TSSIGVKGSIGYIAPEYGLG-------SEVSTNGDVYSYGILMLELII-RKKPSD 488 (789)
Q Consensus 422 ---~~~kl~Dfgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-------~~~~~k~DV~sfGvvl~ellt-G~~P~~ 488 (789)
+.+||+|||+++........ .......||..|+|||++.+ ..++.++|||||||++|||++ |+.||.
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~ 241 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241 (434)
T ss_dssp CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence 58999999999987654422 12234579999999999865 568999999999999999999 999997
Q ss_pred ccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccc
Q 041249 489 IMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLA 568 (789)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~ 568 (789)
..... ...+.+...... ... ..........+.+++..|++.++..||+...+
T Consensus 242 ~~~~~---~~~i~~~~~~~~-------~~~------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 293 (434)
T 2rio_A 242 DKYSR---ESNIIRGIFSLD-------EMK------------------CLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293 (434)
T ss_dssp STTTH---HHHHHHTCCCCC-------CCT------------------TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred Cchhh---HHHHhcCCCCcc-------ccc------------------ccccccchHHHHHHHHHHhhCChhhCCCHHHH
Confidence 43221 122222111110 000 00112344567788999999999999999887
Q ss_pred ccccc
Q 041249 569 GSILP 573 (789)
Q Consensus 569 ~~~l~ 573 (789)
..++-
T Consensus 294 l~hp~ 298 (434)
T 2rio_A 294 LRHPL 298 (434)
T ss_dssp HTSGG
T ss_pred HhCCc
Confidence 66554
No 289
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=2.9e-29 Score=270.11 Aligned_cols=176 Identities=20% Similarity=0.265 Sum_probs=109.7
Q ss_pred ccchhcccCCcccc--cCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEE
Q 041249 580 FLKILNLENNSFTH--EIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLS 657 (789)
Q Consensus 580 ~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 657 (789)
+|++|++++|+++. ..+..|..+++|++|++++|.++ .+|..+. ++|++|++++|++++..|..|..+++|++|+
T Consensus 146 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 222 (330)
T 1xku_A 146 QMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLG 222 (330)
T ss_dssp TCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEE
T ss_pred cccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 34455555555532 44555666666666666666666 3444333 5666666666666665566666666777777
Q ss_pred ccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccC------CCCccEEEcc
Q 041249 658 LGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFN------ISSIAEFDVG 731 (789)
Q Consensus 658 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls 731 (789)
|++|++++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|++++|+|++..+..|.. .+.|+.|+++
T Consensus 223 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~ 301 (330)
T 1xku_A 223 LSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLF 301 (330)
T ss_dssp CCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECC
T ss_pred CCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEee
Confidence 7777766666666666667777777777776 56666666777777777777776555555533 3567778888
Q ss_pred CCcccc-cCCcccccCCCCccEEEccCCc
Q 041249 732 ENKIQG-NIPLDYGFTLQNLQYFSIGTNR 759 (789)
Q Consensus 732 ~N~l~~-~ip~~~~~~l~~L~~L~L~~N~ 759 (789)
+|++.. .++...|..+.+++.++|++|+
T Consensus 302 ~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 302 SNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cCcccccccCccccccccceeEEEecccC
Confidence 887752 2555556577788888888774
No 290
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=3.1e-31 Score=295.40 Aligned_cols=253 Identities=21% Similarity=0.241 Sum_probs=182.5
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCCce
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 346 (789)
...+|...+.||+|+||+||.... .+++.||||++..... ..+.+|+++++.+ +||||+++++++.... .
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~-----~ 92 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQ-----F 92 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETT-----E
T ss_pred ccEEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCC-----E
Confidence 455788889999999999654333 3689999999864332 2356899999999 8999999999987765 7
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC-----C
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE-----E 421 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~-----~ 421 (789)
.++||||+. |+|.+++... ...+.+.++..++.|++.||+|||+.+ |+||||||+||+++. .
T Consensus 93 ~~lv~E~~~-g~L~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~ 159 (432)
T 3p23_A 93 QYIAIELCA-ATLQEYVEQK---------DFAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGK 159 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS---------SCCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTB
T ss_pred EEEEEECCC-CCHHHHHHhc---------CCCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCc
Confidence 899999997 6999998654 123444556789999999999999998 999999999999953 3
Q ss_pred CceeeCcccccccCCCCCC-ccceeeecccccccCcccCC---CCCcCccccchhhHHHHHHHHH-hcCCCCccccCCcc
Q 041249 422 MVSHVGDFGLARFLPPTHV-QTSSIGVKGSIGYIAPEYGL---GSEVSTNGDVYSYGILMLELII-RKKPSDIMFEGDMN 496 (789)
Q Consensus 422 ~~~kl~Dfgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~sfGvvl~ellt-G~~P~~~~~~~~~~ 496 (789)
..+||+|||+++....... ........||..|+|||++. ...++.++|||||||++|||++ |+.||......
T Consensus 160 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--- 236 (432)
T 3p23_A 160 IKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--- 236 (432)
T ss_dssp CCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---
T ss_pred eeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---
Confidence 4678999999998765432 12234467999999999987 4567889999999999999999 99998632111
Q ss_pred HHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCccccccccc
Q 041249 497 LHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSIL 572 (789)
Q Consensus 497 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~l 572 (789)
... ........+...+ .......+.+++..|++.++..|++...+..++
T Consensus 237 ~~~---~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp 285 (432)
T 3p23_A 237 QAN---ILLGACSLDCLHP------------------------EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP 285 (432)
T ss_dssp HHH---HHTTCCCCTTSCT------------------------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred HHH---HHhccCCccccCc------------------------cccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence 111 1111100000000 012233456788899999999999998876554
No 291
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=4.3e-31 Score=281.93 Aligned_cols=232 Identities=28% Similarity=0.453 Sum_probs=217.9
Q ss_pred cccceeeEeccCc-ccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCc
Q 041249 552 SKAQKVTILDLES-LKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLI 630 (789)
Q Consensus 552 ~~c~~l~~l~l~s-~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~ 630 (789)
..+.+++.+++.+ +.+....+..+.++++|++|+|++|++++.+|..|..+++|++|+|++|+|++.+|..|..+++|+
T Consensus 73 ~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 152 (313)
T 1ogq_A 73 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152 (313)
T ss_dssp GGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCC
T ss_pred hCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCC
Confidence 3567889999995 888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccCCCCCCCCcccCCCC-CCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCc
Q 041249 631 RIGLAKNQLMGKIPSDFGSLS-KIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVN 709 (789)
Q Consensus 631 ~L~l~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 709 (789)
+|++++|++++.+|..|..++ +|++|+|++|++++..|..|..++ |++|+|++|++++..|..|..+++|+.|+|++|
T Consensus 153 ~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 231 (313)
T 1ogq_A 153 GITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN 231 (313)
T ss_dssp EEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSS
T ss_pred eEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCC
Confidence 999999999989999999998 999999999999999999999997 999999999999999999999999999999999
Q ss_pred cccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCc-Cccc
Q 041249 710 RLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNK-LTGE 787 (789)
Q Consensus 710 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~ 787 (789)
++++.+|. +..+++|++|+|++|+|++.+|..+. .+++|++|+|++|++++.+|.. ..+++|+.+++++|+ ++|.
T Consensus 232 ~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 232 SLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLT-QLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp EECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGG-GCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred ceeeecCc-ccccCCCCEEECcCCcccCcCChHHh-cCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 99976665 88999999999999999989998876 8999999999999999998887 889999999999998 7774
No 292
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.96 E-value=1e-30 Score=308.75 Aligned_cols=198 Identities=23% Similarity=0.313 Sum_probs=168.4
Q ss_pred hcCCCCCCcccccCCccEEEEEEcC-CceEEEEEEecccc-chhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDE-GRTTVTVKVFNLHH-HRASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.++|...+.||+|+||+||+|.+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..+...
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 3689999999999999999999975 68999999986443 344567899999999999999999999998765333334
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+.+++|.+++. ..+++.++..|+.||+.||.|||+.+ ||||||||+||+++.+ .+||
T Consensus 159 ~~lv~E~~~g~~L~~~~~------------~~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl 222 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKG------------QKLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKL 222 (681)
T ss_dssp EEEEEECCCCEECC----------------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEE
T ss_pred eEEEEEeCCCCcHHHHHh------------CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEE
Confidence 799999999999988663 25899999999999999999999998 9999999999999986 8999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
+|||+++..... ....||+.|+|||++.++ ++.++|||||||++|||++|..|+..
T Consensus 223 ~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~ 278 (681)
T 2pzi_A 223 IDLGAVSRINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNG 278 (681)
T ss_dssp CCCTTCEETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred EecccchhcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcc
Confidence 999999876543 235699999999988655 48999999999999999999998863
No 293
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=7.7e-31 Score=291.07 Aligned_cols=254 Identities=15% Similarity=0.081 Sum_probs=182.4
Q ss_pred HhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc---hhhHHHHHHHHHHhcCCC-Cccceeeee-------
Q 041249 267 NATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRH-RNLVKVFTA------- 335 (789)
Q Consensus 267 ~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-~niv~l~~~------- 335 (789)
..+.+|...+.||+|+||+||+|.+..+++.||||+++.... ...+.+.+|+.+++.++| +|...+..+
T Consensus 75 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~ 154 (413)
T 3dzo_A 75 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 154 (413)
T ss_dssp SCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCC
T ss_pred CCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccch
Confidence 445567788899999999999999998999999999874432 235789999999999987 332222111
Q ss_pred --------------eccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041249 336 --------------CSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD 401 (789)
Q Consensus 336 --------------~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~ 401 (789)
+...........+++|+++ .++|.+++.... ........+++..++.++.|++.||+|||+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~---~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 230 (413)
T 3dzo_A 155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLL---SHSSTHKSLVHHARLQLTLQVIRLLASLHHY 230 (413)
T ss_dssp EEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHH---HHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhh---cccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0000000011346666655 478988884210 0011245688899999999999999999999
Q ss_pred CCCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccC----------CCCCcCccccch
Q 041249 402 CQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYG----------LGSEVSTNGDVY 471 (789)
Q Consensus 402 ~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~k~DV~ 471 (789)
+ ||||||||+|||++.++.+||+|||+++..... .....| ..|+|||++ ....++.++|||
T Consensus 231 ~---iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dvw 301 (413)
T 3dzo_A 231 G---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTW 301 (413)
T ss_dssp T---EECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHH
T ss_pred C---cccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHH
Confidence 8 999999999999999999999999998875433 233457 999999998 566789999999
Q ss_pred hhHHHHHHHHHhcCCCCccccCCccHHHHHHHhCCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhc
Q 041249 472 SYGILMLELIIRKKPSDIMFEGDMNLHNFARMALPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIG 551 (789)
Q Consensus 472 sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 551 (789)
||||++|||++|+.||...... +..+..+.. ...+...+.+++
T Consensus 302 SlGvil~elltg~~Pf~~~~~~-----------------~~~~~~~~~--------------------~~~~~~~~~~li 344 (413)
T 3dzo_A 302 TLGLAIYWIWCADLPNTDDAAL-----------------GGSEWIFRS--------------------CKNIPQPVRALL 344 (413)
T ss_dssp HHHHHHHHHHHSSCCCCTTGGG-----------------SCSGGGGSS--------------------CCCCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCcchh-----------------hhHHHHHhh--------------------cccCCHHHHHHH
Confidence 9999999999999999743211 000000000 001224466788
Q ss_pred cccceeeEeccCccccccc
Q 041249 552 SKAQKVTILDLESLKLAGS 570 (789)
Q Consensus 552 ~~c~~l~~l~l~s~~~~~~ 570 (789)
..|++.++.+|++......
T Consensus 345 ~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 345 EGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHTCSSGGGSCCHHHHTT
T ss_pred HHHccCChhhCcCHHHHHh
Confidence 8999999999999877654
No 294
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=2.3e-32 Score=308.39 Aligned_cols=109 Identities=20% Similarity=0.201 Sum_probs=70.0
Q ss_pred ccCCeEecCCCcCCCCCCcc-ccCCCCCCEEEccCCcCCC----CCcccccCCCCCCEEEccCCcCCCCCcccc-cCCC-
Q 041249 21 KKLVEPYVSDNFLKGSIPSS-LGLCESLTTIGLFNNNLSG----TIPPQLMGLTSLVALDLSRNQFRGSFPTEV-GNLI- 93 (789)
Q Consensus 21 ~~l~~L~ls~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~- 93 (789)
++|++|+|++|+++...... +..+++|++|+|++|++++ .+|..+..+++|++|+|++|.+++..+..+ ..+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45677777777776433332 5667777777777777763 345666777777777777777764333333 2343
Q ss_pred ---CCCEEeccCCCCCC----cCCccccCCcccccccccCCCC
Q 041249 94 ---NLETLTVSGNILQG----EIPSTLGSCIKLEILEMQGNVF 129 (789)
Q Consensus 94 ---~L~~L~l~~N~l~~----~~p~~~~~l~~L~~l~l~~N~~ 129 (789)
+|++|+|++|+++. .+|..+..+++|++|++++|++
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i 125 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLL 125 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBC
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcC
Confidence 57777777777763 4566677777766666666554
No 295
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.96 E-value=2e-30 Score=279.94 Aligned_cols=196 Identities=17% Similarity=0.179 Sum_probs=158.2
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc--------hhhHHHHHHHHHHhcCC---------CCccce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH--------RASRSFIAECRALRSIR---------HRNLVK 331 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---------h~niv~ 331 (789)
.++|...+.||+|+||+||+|++ +++.||||+++.... ...+.+.+|+++++.++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46788899999999999999998 579999999975532 22377889999988886 555555
Q ss_pred ee-----------------eeeccCC--------CCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHH
Q 041249 332 VF-----------------TACSGVD--------YQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLN 386 (789)
Q Consensus 332 l~-----------------~~~~~~~--------~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~ 386 (789)
+. +++.... .......++||||+.+|++.+.+.. ..+++.++..
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----------~~~~~~~~~~ 165 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----------KLSSLATAKS 165 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----------TCCCHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----------cCCCHHHHHH
Confidence 54 4443310 0113479999999999977766632 3578999999
Q ss_pred HHHHHHHHHhhhh-cCCCCCceecCCCCCceecCCCC--------------------ceeeCcccccccCCCCCCcccee
Q 041249 387 IAIDVASALDYLH-HDCQPITTHCDLKPSNILLDEEM--------------------VSHVGDFGLARFLPPTHVQTSSI 445 (789)
Q Consensus 387 i~~~ia~gL~~LH-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~ 445 (789)
|+.|++.||+||| +.+ ||||||||+|||++.++ .+||+|||+|+.....
T Consensus 166 i~~qi~~aL~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------- 235 (336)
T 2vuw_A 166 ILHQLTASLAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------- 235 (336)
T ss_dssp HHHHHHHHHHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------
T ss_pred HHHHHHHHHHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------
Confidence 9999999999999 888 99999999999999886 8999999999876532
Q ss_pred eecccccccCcccCCCCCcCccccchhhHHH-HHHHHHhcCCCC
Q 041249 446 GVKGSIGYIAPEYGLGSEVSTNGDVYSYGIL-MLELIIRKKPSD 488 (789)
Q Consensus 446 ~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvv-l~elltG~~P~~ 488 (789)
...||..|+|||.+.+.. +.++||||+|++ .+++++|..||.
T Consensus 236 ~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 236 IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 246999999999988655 899999998877 777889999985
No 296
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=1.2e-29 Score=269.09 Aligned_cols=236 Identities=17% Similarity=0.199 Sum_probs=177.7
Q ss_pred cCCCCC-CcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHH-hcCCCCccceeeeeeccCCCCCCceE
Q 041249 270 DGFSSA-NLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRAL-RSIRHRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 270 ~~f~~~-~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~~~~~~ 347 (789)
++|... +.||+|+||.||+|....+++.||+|+++. ...+.+|++++ +..+||||+++++++.... .+....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLY-AGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhc-CCCceE
Confidence 466666 789999999999999998999999999853 24577888888 5559999999999986521 122368
Q ss_pred EEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCC---CCce
Q 041249 348 ALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDE---EMVS 424 (789)
Q Consensus 348 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~---~~~~ 424 (789)
++||||+.+|+|.+++... ....+++.++..++.|++.||+|||+.+ |+||||||+||+++. ++.+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~ 159 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDR--------GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAIL 159 (299)
T ss_dssp EEEECCCCSCBHHHHHHHC--------TTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCE
T ss_pred EEEEeecCCCcHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcE
Confidence 9999999999999999754 3356899999999999999999999998 999999999999998 7899
Q ss_pred eeCcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccCCccHHHHHHHh
Q 041249 425 HVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEGDMNLHNFARMA 504 (789)
Q Consensus 425 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 504 (789)
||+|||++.... +..++.++|||||||++|||++|+.||....... .
T Consensus 160 kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~---------~ 206 (299)
T 3m2w_A 160 KLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---------I 206 (299)
T ss_dssp EECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------------
T ss_pred EEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh---------h
Confidence 999999986532 2457889999999999999999999996321110 0
Q ss_pred CCCchhhhccCCcccChhhHHHhhhhhhhhhhhchhHHHHHHHHhhccccceeeEeccCcccccccc
Q 041249 505 LPDHVMDIVDSTLLNDVEDLAIISNQRQRQIRVNNIIECLISMLRIGSKAQKVTILDLESLKLAGSI 571 (789)
Q Consensus 505 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~c~~l~~l~l~s~~~~~~~ 571 (789)
...-...+....... +......+...+.+++..|++.++..|++...+..+
T Consensus 207 ~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 207 SPGMKTRIRMGQYEF----------------PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp -CCSCCSSCTTCCSS----------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hHHHHHHHhhccccC----------------CchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000000000000000 000112334567788899999999999998877543
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.9e-28 Score=255.53 Aligned_cols=225 Identities=18% Similarity=0.192 Sum_probs=200.7
Q ss_pred EeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCC
Q 041249 559 ILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQ 638 (789)
Q Consensus 559 ~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~ 638 (789)
.++.....+... +.. -.++|++|+|++|++++..+..|..+++|++|+|++|.|++..|..|.++++|++|++++|+
T Consensus 15 ~~~c~~~~l~~i-p~~--~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 15 TTSCPQQGLQAV-PVG--IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp EEECCSSCCSSC-CTT--CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred EEEcCcCCcccC-CcC--CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 455555444432 222 24689999999999998888889999999999999999998889999999999999999997
Q ss_pred -CCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCc
Q 041249 639 -LMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPS 717 (789)
Q Consensus 639 -l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 717 (789)
++...|..|..+++|++|++++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 171 (285)
T 1ozn_A 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171 (285)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred CccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHH
Confidence 8877788999999999999999999988899999999999999999999977777899999999999999999977777
Q ss_pred cccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCccc
Q 041249 718 SIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGE 787 (789)
Q Consensus 718 ~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 787 (789)
.|..+++|+.|+|++|.|++..|..+. .+++|++|+|++|+|++..+..+..+++|+.|++++|++++.
T Consensus 172 ~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 172 AFRGLHSLDRLLLHQNRVAHVHPHAFR-DLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTT-TCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred HhcCccccCEEECCCCcccccCHhHcc-CcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 899999999999999999955566655 899999999999999988778899999999999999999863
No 298
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.6e-28 Score=263.69 Aligned_cols=227 Identities=17% Similarity=0.253 Sum_probs=211.0
Q ss_pred cceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEE
Q 041249 554 AQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIG 633 (789)
Q Consensus 554 c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ 633 (789)
..+++.+++..+.+. ..+..+.++++|++|+|++|+++ .+|..|..+++|++|+|++|+|+ .+|..|.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 467888999999887 66777889999999999999999 88999999999999999999999 7899999999999999
Q ss_pred cccCCCCCCCCcccCC---------CCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCee
Q 041249 634 LAKNQLMGKIPSDFGS---------LSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVIL 704 (789)
Q Consensus 634 l~~N~l~~~~~~~~~~---------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 704 (789)
+++|.+.+.+|..+.. +++|++|+|++|+|+ .+|..|.++++|++|+|++|+++ .+|..|..+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEE
Confidence 9999888888887754 999999999999999 88889999999999999999999 567789999999999
Q ss_pred eccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcC
Q 041249 705 YLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKL 784 (789)
Q Consensus 705 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 784 (789)
+|++|.+.+.+|..|..+++|+.|+|++|.+.+.+|..+. .+++|++|+|++|++.+.+|..+.++++|+.+++..|.+
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIH-RLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGG-GCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhh-cCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 9999999999999999999999999999999989999876 899999999999999999999999999999999998876
Q ss_pred cc
Q 041249 785 TG 786 (789)
Q Consensus 785 ~~ 786 (789)
..
T Consensus 314 ~~ 315 (328)
T 4fcg_A 314 AQ 315 (328)
T ss_dssp CC
T ss_pred HH
Confidence 54
No 299
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.96 E-value=7.2e-29 Score=261.07 Aligned_cols=171 Identities=12% Similarity=0.109 Sum_probs=150.3
Q ss_pred cCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc---hhhHHHHHHHHHHhcCCCCccceeeeeeccCCCCCCce
Q 041249 270 DGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH---RASRSFIAECRALRSIRHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 270 ~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 346 (789)
+.|...+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|++.+++++||||+++++++...+ .
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~-----~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA-----G 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----E
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC-----c
Confidence 568889999999999999999998899999999975532 23477999999999999999999999987765 7
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.++||||+.+++|.+++... ....+...|+.|++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 106 ~~lv~e~~~g~~L~~~l~~~------------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl 170 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADTS------------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVL 170 (286)
T ss_dssp EEEEEECCCEEEHHHHHTTC------------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEE
T ss_pred EEEEEEecCCCCHHHHHhcC------------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEE
Confidence 89999999999999998422 255678899999999999999998 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
++++ |++ .++.++|||||||++|||++|+.||..
T Consensus 171 ~~~~----------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~ 204 (286)
T 3uqc_A 171 AYPA----------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPE 204 (286)
T ss_dssp CSCC----------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCC
T ss_pred Eecc----------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 8543 333 368999999999999999999999974
No 300
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=6.2e-28 Score=270.39 Aligned_cols=229 Identities=23% Similarity=0.217 Sum_probs=209.5
Q ss_pred ceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEc
Q 041249 555 QKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGL 634 (789)
Q Consensus 555 ~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l 634 (789)
.+++.+++..+.+....+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 35677899999998888889999999999999999999888899999999999999999999777778999999999999
Q ss_pred ccCCCCCCCCcccCCCCCCcEEEccC-CCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccc
Q 041249 635 AKNQLMGKIPSDFGSLSKIEVLSLGF-NNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSG 713 (789)
Q Consensus 635 ~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 713 (789)
++|+|+...+..|..+++|++|+|++ |.+....+..|.++++|++|+|++|+|+ .+| .+..+++|+.|+|++|+|++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCc
Confidence 99999987788899999999999999 5666666668999999999999999999 566 58999999999999999999
Q ss_pred cCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcc
Q 041249 714 IVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTG 786 (789)
Q Consensus 714 ~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 786 (789)
..|..|..+++|+.|+|++|+|+ .++...+.++++|++|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCC-EECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred cChhhhccCccCCEEECCCCcee-EEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 88999999999999999999999 6665656689999999999999998888889999999999999999864
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=2.2e-28 Score=260.29 Aligned_cols=231 Identities=21% Similarity=0.221 Sum_probs=208.9
Q ss_pred ceeeEeccCcccccccccccccCccccchhcccCCccccc--CcccccCccceeeecccCCCCccCCCccCcCCCCCcEE
Q 041249 555 QKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHE--IPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRI 632 (789)
Q Consensus 555 ~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L 632 (789)
.+++.+++..+.+.......|.++++|++|+|++|+++.. .+..+..+++|++|+|++|.++ .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 3678889999988866556689999999999999999844 3677888999999999999999 577789999999999
Q ss_pred EcccCCCCCCCC-cccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCc-cCCccccCCCCCCeeeccCcc
Q 041249 633 GLAKNQLMGKIP-SDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAG-SIPFTLSKLKNLVILYLGVNR 710 (789)
Q Consensus 633 ~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~ 710 (789)
++++|++++..+ ..|..+++|++|++++|++++..+..|.++++|++|+|++|++++ ..|..|..+++|++|+|++|+
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 999999996655 579999999999999999999999999999999999999999986 588999999999999999999
Q ss_pred ccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCC-CCCeeeccCCcCccc
Q 041249 711 LSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNAS-KLEVFQALNNKLTGE 787 (789)
Q Consensus 711 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~ 787 (789)
+++..|..|..+++|+.|+|++|+|+ .++...+..+++|++|+|++|++++..|..+..++ +|+.|++++|++++.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFF-SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCS-BCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccC-ccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 99888999999999999999999999 66665556899999999999999999999999985 999999999999874
No 302
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=2.1e-32 Score=308.72 Aligned_cols=159 Identities=23% Similarity=0.221 Sum_probs=120.2
Q ss_pred CEEcCCCCCCccCCcC-ccCCccCCeEecCCCcCCC----CCCccccCCCCCCEEEccCCcCCCCCcccc-cCCC----C
Q 041249 1 ILALDSNRLSGNIPPS-IGNLKKLVEPYVSDNFLKG----SIPSSLGLCESLTTIGLFNNNLSGTIPPQL-MGLT----S 70 (789)
Q Consensus 1 ~l~l~~n~~~~~~p~~-~~~l~~l~~L~ls~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~----~ 70 (789)
.|||++|+++...... +..+++|++|+|++|.+++ .+++.+..+++|++|+|++|.+++..+..+ ..++ +
T Consensus 7 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~ 86 (461)
T 1z7x_W 7 SLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCK 86 (461)
T ss_dssp EEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCC
T ss_pred ehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCc
Confidence 4899999998654444 7789999999999999984 457788899999999999999986444333 3455 7
Q ss_pred CCEEEccCCcCCC----CCcccccCCCCCCEEeccCCCCCCcCCccccCCcccccccccCCCCCccceeecCCcccCCC-
Q 041249 71 LVALDLSRNQFRG----SFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQGLTILDLSRNKLSGE- 145 (789)
Q Consensus 71 L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~l~~l~ls~N~l~~~- 145 (789)
|++|+|++|+++. .+|..+..+++|++|+|++|.+++..+..+... + ......|+.|+|++|.+++.
T Consensus 87 L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~--l------~~~~~~L~~L~L~~n~l~~~~ 158 (461)
T 1z7x_W 87 IQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEG--L------LDPQCRLEKLQLEYCSLSAAS 158 (461)
T ss_dssp CCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHH--H------TSTTCCCCEEECTTSCCBGGG
T ss_pred eeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHH--H------hcCCCcceEEECCCCCCCHHH
Confidence 9999999999984 568899999999999999999985544433320 0 00112345556666666653
Q ss_pred ---chhhhcCcccccEEecccCCCC
Q 041249 146 ---IPEFLVGLKVIENLNLSYNDLE 167 (789)
Q Consensus 146 ---~p~~~~~~~~l~~l~ls~N~~~ 167 (789)
++..+..+++|++|++++|+++
T Consensus 159 ~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 159 CEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHHHhhCCCCCEEECcCCCcc
Confidence 4666777899999999999774
No 303
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=3.2e-28 Score=261.32 Aligned_cols=206 Identities=22% Similarity=0.330 Sum_probs=194.5
Q ss_pred ccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEE
Q 041249 578 LSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLS 657 (789)
Q Consensus 578 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 657 (789)
.+.++.|+|++|+++ .+|..+..+++|++|+|++|.|+ .+|..|.++++|++|+|++|+++ .+|..|..+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 578999999999999 67888899999999999999999 88999999999999999999999 7898999999999999
Q ss_pred ccCCCCCccCCcCCCC---------CCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEE
Q 041249 658 LGFNNLIGSIPPPLGN---------LSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEF 728 (789)
Q Consensus 658 L~~N~l~~~~~~~~~~---------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 728 (789)
|++|++.+.+|..+.. +++|++|+|++|+|+ .+|..|.++++|++|+|++|+++ .+|..+..+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEE
Confidence 9999998899988765 999999999999999 88999999999999999999999 577789999999999
Q ss_pred EccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 729 DVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 729 ~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
+|++|.+.+.+|..+. ++++|++|+|++|.+.+.+|..+..+++|+.|++++|++.|.+|
T Consensus 235 ~Ls~n~~~~~~p~~~~-~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP 294 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFG-GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLP 294 (328)
T ss_dssp ECTTCTTCCBCCCCTT-CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCC
T ss_pred ECcCCcchhhhHHHhc-CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhcc
Confidence 9999999989998876 89999999999999999999999999999999999999999987
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=7.6e-28 Score=270.65 Aligned_cols=229 Identities=19% Similarity=0.174 Sum_probs=209.1
Q ss_pred ceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEc
Q 041249 555 QKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGL 634 (789)
Q Consensus 555 ~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l 634 (789)
.+++.+++..+.+....+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 35778999999998888899999999999999999999988899999999999999999999887888999999999999
Q ss_pred ccCCCCCCCCcccCCCCCCcEEEccC-CCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccc
Q 041249 635 AKNQLMGKIPSDFGSLSKIEVLSLGF-NNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSG 713 (789)
Q Consensus 635 ~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 713 (789)
++|+|+...+..|..+++|+.|+|++ |.++...+..|.++++|++|+|++|+|++ +| .+..+++|+.|+|++|+|++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcc
Confidence 99999977777899999999999999 66776666789999999999999999994 45 58999999999999999999
Q ss_pred cCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcc
Q 041249 714 IVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTG 786 (789)
Q Consensus 714 ~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 786 (789)
..|..|..+++|+.|+|++|+|+ .++...+.++++|++|+|++|+|++..+..|..+++|+.|+|++|++.+
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cCcccccCccCCCEEEeCCCcCc-eECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 99999999999999999999999 5555555589999999999999998888889999999999999999865
No 305
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=1.7e-27 Score=249.38 Aligned_cols=209 Identities=22% Similarity=0.203 Sum_probs=192.1
Q ss_pred cccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEc
Q 041249 579 SFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSL 658 (789)
Q Consensus 579 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 658 (789)
++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 47999999999999888889999999999999999999888889999999999999999999888889999999999999
Q ss_pred cCCCCCccCCcCCCCCCCCCEEEccCCcCCcc-CCccccCCCCCCeeeccCccccccCCccccCCCCcc----EEEccCC
Q 041249 659 GFNNLIGSIPPPLGNLSSLRKISLAINNLAGS-IPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIA----EFDVGEN 733 (789)
Q Consensus 659 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N 733 (789)
++|++++..+..|..+++|++|+|++|++++. +|..|.++++|++|+|++|++++..+..|..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99999988887899999999999999999864 589999999999999999999988888888887777 9999999
Q ss_pred cccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 734 KIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 734 ~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
+|+ .+|...+ ...+|++|+|++|+|++..+..|..+++|+.|++++|++++..|
T Consensus 188 ~l~-~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 188 PMN-FIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCC-EECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ccc-ccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 999 7777777 56699999999999998777788999999999999999998643
No 306
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.9e-28 Score=263.85 Aligned_cols=233 Identities=16% Similarity=0.142 Sum_probs=201.4
Q ss_pred ceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEc
Q 041249 555 QKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGL 634 (789)
Q Consensus 555 ~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l 634 (789)
.+++.+++..+.+.......+.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|++
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 36788999999888776778999999999999999999888889999999999999999999665566999999999999
Q ss_pred ccCCCCCCCC-cccCCCCCCcEEEccCC-CCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCcccc
Q 041249 635 AKNQLMGKIP-SDFGSLSKIEVLSLGFN-NLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLS 712 (789)
Q Consensus 635 ~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 712 (789)
++|+++...+ ..|..+++|++|++++| .+++..+..|.++++|++|++++|++++..|..|..+++|++|++++|+++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 9999995444 47999999999999999 588777889999999999999999999888999999999999999999998
Q ss_pred ccCCccccCCCCccEEEccCCcccccC-------------------------------CcccccCCCCccEEEccCCccc
Q 041249 713 GIVPSSIFNISSIAEFDVGENKIQGNI-------------------------------PLDYGFTLQNLQYFSIGTNRIT 761 (789)
Q Consensus 713 ~~~p~~~~~l~~L~~L~Ls~N~l~~~i-------------------------------p~~~~~~l~~L~~L~L~~N~l~ 761 (789)
...+..+..+++|+.|+|++|++++.. |..+ ..+++|++|+|++|+|+
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l-~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLL-NQISGLLELEFSRNQLK 290 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHH-HTCTTCCEEECCSSCCC
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHH-hcccCCCEEECCCCCCC
Confidence 544444556899999999999998432 2223 37899999999999999
Q ss_pred ccCcccccCCCCCCeeeccCCcCcccC
Q 041249 762 GAIPPSISNASKLEVFQALNNKLTGEV 788 (789)
Q Consensus 762 ~~~~~~~~~l~~L~~L~l~~N~l~~~~ 788 (789)
...+..|..+++|+.|++++|++++..
T Consensus 291 ~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 291 SVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 554444689999999999999999854
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=2.1e-27 Score=249.92 Aligned_cols=208 Identities=19% Similarity=0.210 Sum_probs=193.1
Q ss_pred ceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCC-CccCCCccCcCCCCCcEEE
Q 041249 555 QKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNS-IGGEIPVNLSSCSNLIRIG 633 (789)
Q Consensus 555 ~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-i~~~~p~~~~~l~~L~~L~ 633 (789)
.+++.+++..+.+....+..|..+++|++|+|++|++++..|..|..+++|++|+|++|. ++...|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 367788999999888777889999999999999999998889999999999999999997 8877789999999999999
Q ss_pred cccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccc
Q 041249 634 LAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSG 713 (789)
Q Consensus 634 l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 713 (789)
+++|++++..|..|.++++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 99999998888899999999999999999998888889999999999999999997777789999999999999999999
Q ss_pred cCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCccccc
Q 041249 714 IVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGA 763 (789)
Q Consensus 714 ~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~ 763 (789)
..|..|..+++|+.|+|++|+|+ .+|...+..+++|++|+|++|++...
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCS-CCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred cCHhHccCcccccEeeCCCCcCC-cCCHHHcccCcccCEEeccCCCccCC
Confidence 88999999999999999999999 67777666899999999999999853
No 308
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=2.5e-26 Score=239.69 Aligned_cols=202 Identities=21% Similarity=0.245 Sum_probs=118.8
Q ss_pred cchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccC
Q 041249 581 LKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGF 660 (789)
Q Consensus 581 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 660 (789)
.+++++++|+++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|++++|+|+...+..|.++++|++|+|++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 345566666666 3444332 3566666666666655455566666666666666666644444555666666666666
Q ss_pred CCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCC
Q 041249 661 NNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIP 740 (789)
Q Consensus 661 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip 740 (789)
|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~ 173 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-RVP 173 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCC
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCc-EeC
Confidence 6666555555566666666666666666555555666666666666666666544455566666666666666665 455
Q ss_pred cccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcc
Q 041249 741 LDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTG 786 (789)
Q Consensus 741 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 786 (789)
...+..+++|++|+|++|+|++..+..|..+++|+.|++++|++.+
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 4444456666666666666665555555566666666666666543
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=1.3e-26 Score=260.54 Aligned_cols=226 Identities=19% Similarity=0.172 Sum_probs=197.9
Q ss_pred eEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccC
Q 041249 558 TILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKN 637 (789)
Q Consensus 558 ~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N 637 (789)
..++.....+. ..|..+. ++|++|+|++|+|+++.|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 34444444433 2333332 68999999999999989999999999999999999999888899999999999999999
Q ss_pred CCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccC-CcCCccCCccccCCCCCCeeeccCccccccCC
Q 041249 638 QLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAI-NNLAGSIPFTLSKLKNLVILYLGVNRLSGIVP 716 (789)
Q Consensus 638 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 716 (789)
+|+...+..|..+++|++|+|++|+|+...+..|.++++|++|+|++ |.++...+..|.++++|++|+|++|+|++ +|
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~ 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc
Confidence 99987788899999999999999999988888999999999999999 56775666689999999999999999995 44
Q ss_pred ccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 717 SSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 717 ~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
.+..+++|+.|+|++|+|+ .++...+.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|
T Consensus 213 -~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 283 (452)
T 3zyi_A 213 -NLTPLVGLEELEMSGNHFP-EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH 283 (452)
T ss_dssp -CCTTCTTCCEEECTTSCCS-EECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred -cccccccccEEECcCCcCc-ccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh
Confidence 5889999999999999999 5544545599999999999999999999999999999999999999997543
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=4.3e-28 Score=258.65 Aligned_cols=204 Identities=17% Similarity=0.178 Sum_probs=181.6
Q ss_pred CccccchhcccCCcccccCcccc--cCccceeeecccCCCCccCCCccCcCC-----CCCcEEEcccCCCCCCCCcccCC
Q 041249 577 NLSFLKILNLENNSFTHEIPSEI--GRLRRLQVPDLNNNSIGGEIPVNLSSC-----SNLIRIGLAKNQLMGKIPSDFGS 649 (789)
Q Consensus 577 ~l~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~Ls~N~i~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~~~~~~~ 649 (789)
++++|++|+|++|++++..|..+ ..+++|++|+|++|+|++. |..+..+ ++|++|+|++|+|++..|..|..
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 68999999999999999899886 8999999999999999977 8888877 99999999999999888899999
Q ss_pred CCCCcEEEccCCCCCcc--CCcCC--CCCCCCCEEEccCCcCCc---cCCccccCCCCCCeeeccCccccccCC-ccccC
Q 041249 650 LSKIEVLSLGFNNLIGS--IPPPL--GNLSSLRKISLAINNLAG---SIPFTLSKLKNLVILYLGVNRLSGIVP-SSIFN 721 (789)
Q Consensus 650 l~~L~~L~L~~N~l~~~--~~~~~--~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 721 (789)
+++|++|+|++|++.+. .+..+ ..+++|++|+|++|+|++ .....+.++++|++|+|++|+|++..| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 99999999999998765 23334 889999999999999983 222445788999999999999998775 56777
Q ss_pred CCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCccc
Q 041249 722 ISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGE 787 (789)
Q Consensus 722 l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 787 (789)
+++|++|+|++|+|+ .+|..++ ++|++|+|++|+|++. |. +..+++|+.|++++|+|++.
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~---~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP---AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC---SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred cCCCCEEECCCCccC-hhhhhcc---CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 899999999999999 9999875 8999999999999976 55 89999999999999999974
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=1.4e-26 Score=259.39 Aligned_cols=225 Identities=22% Similarity=0.183 Sum_probs=197.1
Q ss_pred EeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCC
Q 041249 559 ILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQ 638 (789)
Q Consensus 559 ~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~ 638 (789)
.++.....+. ..|..+. ++++.|+|++|+|+++.+..|.++++|++|+|++|.|+++.+..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 3444444433 3343333 679999999999998888999999999999999999998888999999999999999999
Q ss_pred CCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccC-CcCCccCCccccCCCCCCeeeccCccccccCCc
Q 041249 639 LMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAI-NNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPS 717 (789)
Q Consensus 639 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 717 (789)
|+...+..|..+++|++|+|++|+|+...+..|.++++|++|+|++ |.++...+..|.++++|++|+|++|+|+ .+|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~- 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP- 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-
Confidence 9977777899999999999999999988888999999999999999 5666556668999999999999999999 555
Q ss_pred cccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 718 SIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 718 ~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
.+..+++|+.|+|++|+|+ .++...+.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 272 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPH 272 (440)
T ss_dssp CCTTCSSCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCT
T ss_pred ccCCCcccCEEECCCCccC-ccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccCh
Confidence 4889999999999999999 5544445599999999999999999999999999999999999999997543
No 312
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=6.1e-27 Score=249.07 Aligned_cols=226 Identities=17% Similarity=0.191 Sum_probs=195.6
Q ss_pred EeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccC--CCccCcCCCCCcEEEccc
Q 041249 559 ILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGE--IPVNLSSCSNLIRIGLAK 636 (789)
Q Consensus 559 ~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~--~p~~~~~l~~L~~L~l~~ 636 (789)
.++..+..+.. .+..+ .++|++|+|++|+++.+.+..|..+++|++|+|++|+|+.. .|..+..+++|++|++++
T Consensus 11 ~l~c~~~~l~~-ip~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCSS-CCSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCccc-CCCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 44554444432 23322 26899999999999976666789999999999999999843 367778899999999999
Q ss_pred CCCCCCCCcccCCCCCCcEEEccCCCCCccCC-cCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccc-c
Q 041249 637 NQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIP-PPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSG-I 714 (789)
Q Consensus 637 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~ 714 (789)
|.+. .+|..|..+++|++|++++|++++..+ ..|..+++|++|++++|++++..+..|.++++|++|++++|++++ .
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 9998 577779999999999999999997665 689999999999999999998899999999999999999999986 6
Q ss_pred CCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 715 VPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 715 ~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
.|..|..+++|++|+|++|+|++..|..+ ..+++|++|+|++|++++..+..+..+++|+.|++++|++++.+|
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 240 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAF-NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKK 240 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTT-TTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSS
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHh-cCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCH
Confidence 89999999999999999999994445555 489999999999999998888889999999999999999998754
No 313
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.94 E-value=2.7e-26 Score=241.69 Aligned_cols=205 Identities=20% Similarity=0.253 Sum_probs=176.8
Q ss_pred cccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCC
Q 041249 574 HIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKI 653 (789)
Q Consensus 574 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 653 (789)
.+.++++++++++++|+++. +|..+. ++++.|+|++|.|++..+..|.++++|++|+|++|+|++..+ ...+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTC
T ss_pred cccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcC
Confidence 36678889999999999984 555443 588999999999998888889999999999999999985433 3788899
Q ss_pred cEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCC
Q 041249 654 EVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGEN 733 (789)
Q Consensus 654 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 733 (789)
++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999998 67788889999999999999999777788999999999999999999877788889999999999999
Q ss_pred cccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcc
Q 041249 734 KIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTG 786 (789)
Q Consensus 734 ~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 786 (789)
+|+ .+|..++..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|++.+
T Consensus 159 ~l~-~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 159 NLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCS-CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cCC-ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 998 888888778999999999999999 577778888899999999998864
No 314
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=7.1e-27 Score=253.89 Aligned_cols=231 Identities=19% Similarity=0.119 Sum_probs=199.4
Q ss_pred ccceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEE
Q 041249 553 KAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRI 632 (789)
Q Consensus 553 ~c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L 632 (789)
.|......+..++.+.. .|..+. ++|++|+|++|++++..+..|..+++|++|+|++|+|++..|..|.++++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCccc-cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 44444445555555543 343333 589999999999998777789999999999999999998888999999999999
Q ss_pred EcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCC-cCCCCCCCCCEEEccCC-cCCccCCccccCCCCCCeeeccCcc
Q 041249 633 GLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIP-PPLGNLSSLRKISLAIN-NLAGSIPFTLSKLKNLVILYLGVNR 710 (789)
Q Consensus 633 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~ 710 (789)
++++|+|++..+..|.++++|++|+|++|++++..+ ..|.++++|++|++++| .++...+..|.++++|++|++++|+
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 999999997666669999999999999999996555 58999999999999999 5887778899999999999999999
Q ss_pred ccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccC--------------------------
Q 041249 711 LSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAI-------------------------- 764 (789)
Q Consensus 711 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~-------------------------- 764 (789)
+++..|..|..+++|++|++++|.++ .+|..++..+++|++|+|++|++++..
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~ 264 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE 264 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH
T ss_pred cCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc
Confidence 99988999999999999999999997 888887767999999999999998743
Q ss_pred -----cccccCCCCCCeeeccCCcCccc
Q 041249 765 -----PPSISNASKLEVFQALNNKLTGE 787 (789)
Q Consensus 765 -----~~~~~~l~~L~~L~l~~N~l~~~ 787 (789)
|..+..+++|+.|++++|+++..
T Consensus 265 ~l~~l~~~l~~l~~L~~L~Ls~N~l~~i 292 (353)
T 2z80_A 265 SLFQVMKLLNQISGLLELEFSRNQLKSV 292 (353)
T ss_dssp HHHHHHHHHHTCTTCCEEECCSSCCCCC
T ss_pred chhhhHHHHhcccCCCEEECCCCCCCcc
Confidence 44567889999999999999853
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=2.8e-27 Score=252.38 Aligned_cols=228 Identities=18% Similarity=0.204 Sum_probs=191.9
Q ss_pred cccceeeEeccCcccccccccccccCccccchhcccCCccc-ccCccccc-------CccceeeecccCCCCccCCCccC
Q 041249 552 SKAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFT-HEIPSEIG-------RLRRLQVPDLNNNSIGGEIPVNL 623 (789)
Q Consensus 552 ~~c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~-~~~~~~~~-------~l~~L~~L~Ls~N~i~~~~p~~~ 623 (789)
..+.+++.+++..+.+ ..+..+... |+.|+|++|+++ ..+|..+. ++++|++|+|++|+|++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3445566777777776 445555544 999999999995 44666555 79999999999999999999886
Q ss_pred --cCCCCCcEEEcccCCCCCCCCcccCCC-----CCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCcc--CCcc
Q 041249 624 --SSCSNLIRIGLAKNQLMGKIPSDFGSL-----SKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGS--IPFT 694 (789)
Q Consensus 624 --~~l~~L~~L~l~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~ 694 (789)
..+++|++|+|++|++++. |..|..+ ++|++|+|++|++++..|..|.++++|++|+|++|++.+. .|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 8999999999999999976 8888777 8999999999999988889999999999999999998765 3334
Q ss_pred c--cCCCCCCeeeccCccccc---cCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCccccc
Q 041249 695 L--SKLKNLVILYLGVNRLSG---IVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSIS 769 (789)
Q Consensus 695 ~--~~l~~L~~L~Ls~N~l~~---~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 769 (789)
+ ..+++|++|+|++|+|++ .....+..+++|+.|+|++|+|++.+|...+..+++|++|+|++|+|+ .+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 4 899999999999999983 223455688999999999999997676665557899999999999999 6777766
Q ss_pred CCCCCCeeeccCCcCccc
Q 041249 770 NASKLEVFQALNNKLTGE 787 (789)
Q Consensus 770 ~l~~L~~L~l~~N~l~~~ 787 (789)
++|+.|+|++|+|++.
T Consensus 274 --~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp --SEEEEEECCSSCCCSC
T ss_pred --CCceEEECCCCCCCCC
Confidence 8999999999999986
No 316
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=6.2e-26 Score=236.94 Aligned_cols=204 Identities=22% Similarity=0.233 Sum_probs=156.3
Q ss_pred cccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCC
Q 041249 574 HIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKI 653 (789)
Q Consensus 574 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 653 (789)
.+..+++|+.|++++|.++. + ..+..+++|++|+|++|.+++. ..+..+++|++|++++|++++..+..|..+++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 34567778888888888773 3 3477788888888888888753 467788888888888888887777777888888
Q ss_pred cEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCC
Q 041249 654 EVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGEN 733 (789)
Q Consensus 654 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 733 (789)
++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|+|++..+..|..+++|+.|+|++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 88888888888777777788888888888888888766667788888888888888888776777778888888888888
Q ss_pred cccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 734 KIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 734 ~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
+++ .+|...+..+++|++|+|++|++.+. +++|+.|+++.|.++|.+|
T Consensus 192 ~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 192 QLK-SVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVR 239 (272)
T ss_dssp CCS-CCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBB
T ss_pred cCC-ccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCccc
Confidence 887 45555545788888888888877643 4467778888888888765
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=2.1e-26 Score=246.11 Aligned_cols=222 Identities=19% Similarity=0.219 Sum_probs=195.3
Q ss_pred hhccccceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCC
Q 041249 549 RIGSKAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSN 628 (789)
Q Consensus 549 ~i~~~c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~ 628 (789)
.+...+.+++.+++..+.+....+..|..+++|++|+|++|++++..+ |..+++|++|+|++|+|++.. ..++
T Consensus 28 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~ 100 (317)
T 3o53_A 28 SLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPS 100 (317)
T ss_dssp HHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTT
T ss_pred HHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCC
Confidence 344567899999999999998878899999999999999999997655 999999999999999998543 2389
Q ss_pred CcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccc-cCCCCCCeeecc
Q 041249 629 LIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTL-SKLKNLVILYLG 707 (789)
Q Consensus 629 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls 707 (789)
|++|++++|+|++..+.. +++|++|++++|++++..+..|..+++|++|+|++|++++..+..+ ..+++|++|+|+
T Consensus 101 L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~ 177 (317)
T 3o53_A 101 IETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177 (317)
T ss_dssp CCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECT
T ss_pred cCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECC
Confidence 999999999999665543 6789999999999998888899999999999999999998777777 479999999999
Q ss_pred CccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCc
Q 041249 708 VNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLT 785 (789)
Q Consensus 708 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 785 (789)
+|+|++. |. ...+++|++|+|++|+|+ .+|..+. .+++|++|+|++|+|+ .+|..+..+++|+.|++++|+++
T Consensus 178 ~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~-~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 178 YNFIYDV-KG-QVVFAKLKTLDLSSNKLA-FMGPEFQ-SAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFH 250 (317)
T ss_dssp TSCCCEE-EC-CCCCTTCCEEECCSSCCC-EECGGGG-GGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCB
T ss_pred CCcCccc-cc-ccccccCCEEECCCCcCC-cchhhhc-ccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCcc
Confidence 9999965 33 345899999999999999 7777765 8999999999999999 46788999999999999999998
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=1.1e-24 Score=251.66 Aligned_cols=142 Identities=25% Similarity=0.294 Sum_probs=99.0
Q ss_pred cchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccC
Q 041249 581 LKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGF 660 (789)
Q Consensus 581 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 660 (789)
|+.|++++|+|++ +| ..+++|+.|+|++|.|++ +|.. +++|+.|++++|.|+ .+|.. +++|+.|+|++
T Consensus 163 L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~ 230 (622)
T 3g06_A 163 LCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSG 230 (622)
T ss_dssp CCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCS
T ss_pred CCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccC
Confidence 4456666777764 44 345678888888888874 4432 367888888888887 44432 46788888888
Q ss_pred CCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCC
Q 041249 661 NNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIP 740 (789)
Q Consensus 661 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip 740 (789)
|+|++ +| ..+++|++|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|++++.+|
T Consensus 231 N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~ 301 (622)
T 3g06_A 231 NRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTL 301 (622)
T ss_dssp SCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHH
T ss_pred CccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCH
Confidence 88874 44 34577888888888887 4554 5567888888888887 667777788888888888888876655
Q ss_pred ccc
Q 041249 741 LDY 743 (789)
Q Consensus 741 ~~~ 743 (789)
..+
T Consensus 302 ~~l 304 (622)
T 3g06_A 302 QAL 304 (622)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=5.9e-25 Score=229.25 Aligned_cols=208 Identities=22% Similarity=0.238 Sum_probs=184.4
Q ss_pred cccce-eeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCc
Q 041249 552 SKAQK-VTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLI 630 (789)
Q Consensus 552 ~~c~~-l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~ 630 (789)
+.|.. ...++...+.+.. .+..+. ++|++|+|++|++++..+..|..+++|++|+|++|+|+...+..|.++++|+
T Consensus 12 C~c~~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~ 88 (270)
T 2o6q_A 12 CSCNNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLE 88 (270)
T ss_dssp BEEETTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCC
T ss_pred CEeCCCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCC
Confidence 44542 4567777777664 344333 6799999999999988888999999999999999999977777789999999
Q ss_pred EEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCcc
Q 041249 631 RIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNR 710 (789)
Q Consensus 631 ~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 710 (789)
+|++++|+++...+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 89 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 168 (270)
T 2o6q_A 89 TLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQ 168 (270)
T ss_dssp EEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCc
Confidence 99999999998777889999999999999999998888899999999999999999997777779999999999999999
Q ss_pred ccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCccccc
Q 041249 711 LSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGA 763 (789)
Q Consensus 711 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~ 763 (789)
|++..+..|..+++|+.|+|++|+|+ .+|...+..+++|+.|+|++|++...
T Consensus 169 l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 169 LKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CcEeChhHhccCCCcCEEECCCCcCC-cCCHHHhccccCCCEEEecCCCeeCC
Confidence 99887888999999999999999999 78887776899999999999998743
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.3e-26 Score=259.03 Aligned_cols=225 Identities=19% Similarity=0.209 Sum_probs=199.9
Q ss_pred HHHhhccccceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcC
Q 041249 546 SMLRIGSKAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSS 625 (789)
Q Consensus 546 ~l~~i~~~c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~ 625 (789)
.+..+...+.+++.+++..+.+....+..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+
T Consensus 25 ~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~----- 97 (487)
T 3oja_A 25 ALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV----- 97 (487)
T ss_dssp HHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----
T ss_pred HHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----
Confidence 344555677899999999999998888899999999999999999997666 9999999999999999995543
Q ss_pred CCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCcccc-CCCCCCee
Q 041249 626 CSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLS-KLKNLVIL 704 (789)
Q Consensus 626 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L 704 (789)
.++|++|++++|.|++..+. .+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|. .+++|+.|
T Consensus 98 ~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 98 GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 28999999999999976654 457899999999999999999999999999999999999998888886 79999999
Q ss_pred eccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcC
Q 041249 705 YLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKL 784 (789)
Q Consensus 705 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 784 (789)
+|++|.|++..+ +..+++|+.|+|++|.|+ .+|..+. .+++|+.|+|++|.|++ +|..+..+++|+.|++++|++
T Consensus 175 ~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~-~~~~~~~-~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l 249 (487)
T 3oja_A 175 NLQYNFIYDVKG--QVVFAKLKTLDLSSNKLA-FMGPEFQ-SAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGF 249 (487)
T ss_dssp ECTTSCCCEEEC--CCCCTTCCEEECCSSCCC-EECGGGG-GGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCB
T ss_pred ecCCCccccccc--cccCCCCCEEECCCCCCC-CCCHhHc-CCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCC
Confidence 999999996633 446899999999999999 6777765 89999999999999995 677899999999999999999
Q ss_pred c
Q 041249 785 T 785 (789)
Q Consensus 785 ~ 785 (789)
+
T Consensus 250 ~ 250 (487)
T 3oja_A 250 H 250 (487)
T ss_dssp C
T ss_pred c
Confidence 8
No 321
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=3e-24 Score=248.04 Aligned_cols=129 Identities=26% Similarity=0.254 Sum_probs=108.2
Q ss_pred ccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEE
Q 041249 578 LSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLS 657 (789)
Q Consensus 578 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 657 (789)
+++|+.|+|++|+|++ +|.. +++|+.|++++|.|+ .+|.. +++|++|+|++|+|++ +| ..+++|+.|+
T Consensus 180 ~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~ 247 (622)
T 3g06_A 180 PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELM 247 (622)
T ss_dssp CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEE
T ss_pred CCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEE
Confidence 4578899999999995 4543 478999999999999 55543 4789999999999995 55 4568999999
Q ss_pred ccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCC
Q 041249 658 LGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNIS 723 (789)
Q Consensus 658 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 723 (789)
|++|+|+ .+|. .+++|++|+|++|+|+ .+|..|.++++|+.|+|++|.+++..|..+..++
T Consensus 248 Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 248 VSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 9999998 4555 5789999999999999 7788999999999999999999988888776543
No 322
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=9.4e-25 Score=227.96 Aligned_cols=206 Identities=21% Similarity=0.237 Sum_probs=185.4
Q ss_pred CccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEE
Q 041249 577 NLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVL 656 (789)
Q Consensus 577 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 656 (789)
.+..+..+++..+.+... ..+..+++|+.|++++|.++. + ..+..+++|++|++++|++++ + ..+..+++|++|
T Consensus 17 ~~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L 90 (272)
T 3rfs_A 17 AFAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYL 90 (272)
T ss_dssp HHHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEE
T ss_pred hHHHHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEE
Confidence 456777889999988854 346788999999999999983 3 468899999999999999985 3 478999999999
Q ss_pred EccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCccc
Q 041249 657 SLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQ 736 (789)
Q Consensus 657 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 736 (789)
+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+|+
T Consensus 91 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 170 (272)
T 3rfs_A 91 ILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ 170 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcC
Confidence 99999999888888999999999999999999888888999999999999999999888888899999999999999999
Q ss_pred ccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 737 GNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 737 ~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
.+|...+..+++|++|+|++|++++..+..+..+++|+.|++++|+++|..|
T Consensus 171 -~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 171 -SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp -CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred -ccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 7777766689999999999999999888889999999999999999998765
No 323
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=1.2e-26 Score=266.31 Aligned_cols=186 Identities=17% Similarity=0.037 Sum_probs=131.7
Q ss_pred ccccCCccEEEEEEcCCceEEEEEEecccc----------chhhHHHHHHHHHHhcC-CCCccceeeeeeccCCCCCCce
Q 041249 278 IGTGSFGSVYKGVLDEGRTTVTVKVFNLHH----------HRASRSFIAECRALRSI-RHRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 278 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 346 (789)
.+.|++|.++.++-...|+.+++|++.... ....+++.+|+++|+++ .|+||+++++++.+.. .
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~-----~ 316 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ-----S 316 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS-----E
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC-----E
Confidence 456777777776666678999999996441 22346799999999999 7999999999998766 8
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceee
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHV 426 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 426 (789)
.||||||+++|+|.+++... ..++.. +|+.||+.||+|+|++| ||||||||+|||+++++++||
T Consensus 317 ~yLVMEyv~G~~L~d~i~~~----------~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL 380 (569)
T 4azs_A 317 GWLVMEKLPGRLLSDMLAAG----------EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARL 380 (569)
T ss_dssp EEEEEECCCSEEHHHHHHTT----------CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHHhC----------CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEE
Confidence 99999999999999999654 345543 58899999999999999 999999999999999999999
Q ss_pred CcccccccCCCCCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCC
Q 041249 427 GDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPS 487 (789)
Q Consensus 427 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~ 487 (789)
+|||+|+........ .....||+.|||||++.+ ++..++|+||+|++++++.+|..|+
T Consensus 381 ~DFGlAr~~~~~~~~--~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 381 IDFGSIVTTPQDCSW--PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp CCCTTEESCC---CC--SHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred eecccCeeCCCCCcc--ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 999999977654322 234679999999999864 6778899999999999887766554
No 324
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=2.1e-25 Score=237.57 Aligned_cols=204 Identities=16% Similarity=0.135 Sum_probs=178.7
Q ss_pred CccccchhcccCCcccccCcccc--cCccceeeecccCCCCccCCC----ccCcCCCCCcEEEcccCCCCCCCCcccCCC
Q 041249 577 NLSFLKILNLENNSFTHEIPSEI--GRLRRLQVPDLNNNSIGGEIP----VNLSSCSNLIRIGLAKNQLMGKIPSDFGSL 650 (789)
Q Consensus 577 ~l~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~Ls~N~i~~~~p----~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 650 (789)
.+++|++|+|++|++++..|..+ ..+++|++|+|++|.|++..+ ..+..+++|++|+|++|+|.+..+..|..+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 45779999999999999999988 899999999999999997655 445679999999999999998888999999
Q ss_pred CCCcEEEccCCCCCcc---C-CcCCCCCCCCCEEEccCCcCCccCCc----cccCCCCCCeeeccCccccccCCccccCC
Q 041249 651 SKIEVLSLGFNNLIGS---I-PPPLGNLSSLRKISLAINNLAGSIPF----TLSKLKNLVILYLGVNRLSGIVPSSIFNI 722 (789)
Q Consensus 651 ~~L~~L~L~~N~l~~~---~-~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 722 (789)
++|++|+|++|++.+. . +..+..+++|++|+|++|+|+ .++. .+..+++|++|+|++|+|++..|..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 9999999999998752 2 334578999999999999998 3443 35788999999999999998878888877
Q ss_pred ---CCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCccc
Q 041249 723 ---SSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGE 787 (789)
Q Consensus 723 ---~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 787 (789)
++|++|+|++|+|+ .+|..++ ++|++|+|++|+|++. |. +..+++|+.|++++|+|+..
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~---~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~~ 309 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLP---AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLVP 309 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCC---SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSCC
T ss_pred cCcCcCCEEECCCCCCC-chhhhhc---CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCCC
Confidence 69999999999999 9998875 7999999999999964 33 68899999999999999864
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=6e-25 Score=229.99 Aligned_cols=207 Identities=20% Similarity=0.177 Sum_probs=187.1
Q ss_pred eeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcc
Q 041249 556 KVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLA 635 (789)
Q Consensus 556 ~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~ 635 (789)
.++.+++..+.+.......|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 57889999999887777789999999999999999998888899999999999999999998888999999999999999
Q ss_pred cCCCCCCCCcccCCCCCCcEEEccCCCCCcc-CCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCC----eeeccCcc
Q 041249 636 KNQLMGKIPSDFGSLSKIEVLSLGFNNLIGS-IPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLV----ILYLGVNR 710 (789)
Q Consensus 636 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~Ls~N~ 710 (789)
+|++.+..+..|..+++|++|++++|++++. +|..|.++++|++|+|++|++++..+..|..+++|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 9999987777899999999999999999874 589999999999999999999988888888777777 89999999
Q ss_pred ccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccC
Q 041249 711 LSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAI 764 (789)
Q Consensus 711 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~ 764 (789)
+++..+..+. ..+|+.|+|++|+|+ .+|..++..+++|++|+|++|++++..
T Consensus 189 l~~~~~~~~~-~~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 189 MNFIQPGAFK-EIRLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp CCEECTTSSC-SCCEEEEECCSSCCS-CCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred ccccCccccC-CCcccEEECCCCcee-ecCHhHhcccccccEEEccCCcccccC
Confidence 9966555554 458999999999999 888887778999999999999998654
No 326
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=5.4e-25 Score=225.16 Aligned_cols=198 Identities=14% Similarity=0.105 Sum_probs=174.8
Q ss_pred cccchhcccCCcccccCcccccCccceeeecccCCC-CccCCCccCcCCCCCcEEEccc-CCCCCCCCcccCCCCCCcEE
Q 041249 579 SFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNS-IGGEIPVNLSSCSNLIRIGLAK-NQLMGKIPSDFGSLSKIEVL 656 (789)
Q Consensus 579 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-i~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L 656 (789)
++|++|+|++|+|+++.+..|..+++|++|++++|+ ++++.+..|.++++|++|++++ |+|+...+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 389999999999998888899999999999999997 9877777999999999999999 99997777899999999999
Q ss_pred EccCCCCCccCCcCCCCCCCCC---EEEccCC-cCCccCCccccCCCCCC-eeeccCccccccCCccccCCCCccEEEcc
Q 041249 657 SLGFNNLIGSIPPPLGNLSSLR---KISLAIN-NLAGSIPFTLSKLKNLV-ILYLGVNRLSGIVPSSIFNISSIAEFDVG 731 (789)
Q Consensus 657 ~L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 731 (789)
++++|++++ +|. |..+++|+ +|++++| +++...+..|.++++|+ .|++++|+++...+..|.. ++|+.|+|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 999999996 665 88999998 9999999 99987788899999999 9999999999444444544 899999999
Q ss_pred CCc-ccccCCcccccCC-CCccEEEccCCcccccCcccccCCCCCCeeeccCCc
Q 041249 732 ENK-IQGNIPLDYGFTL-QNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNK 783 (789)
Q Consensus 732 ~N~-l~~~ip~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 783 (789)
+|+ ++ .+|...+.++ ++|++|+|++|+|++. |.. .+++|+.|+++++.
T Consensus 188 ~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 188 KNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNTW 237 (239)
T ss_dssp TCTTCC-EECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC-
T ss_pred CCCCcc-cCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCcc
Confidence 995 98 8888777788 9999999999999954 433 67789999998873
No 327
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=2e-25 Score=238.64 Aligned_cols=218 Identities=17% Similarity=0.179 Sum_probs=187.4
Q ss_pred eeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcc
Q 041249 556 KVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLA 635 (789)
Q Consensus 556 ~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~ 635 (789)
.+...++..+.+.......+..+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+ |..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 34555566665554444556678899999999999998888999999999999999999997654 9999999999999
Q ss_pred cCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccC
Q 041249 636 KNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIV 715 (789)
Q Consensus 636 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 715 (789)
+|+|++.. ..++|++|++++|++++..+.. +++|++|++++|++++..+..|..+++|++|+|++|++++..
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 99998433 3489999999999999776554 578999999999999888889999999999999999999887
Q ss_pred Ccccc-CCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCccc
Q 041249 716 PSSIF-NISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGE 787 (789)
Q Consensus 716 p~~~~-~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 787 (789)
+..+. .+++|++|+|++|.|+ .+|... .+++|++|+|++|+|++. |..+..+++|+.|++++|++++.
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~-~~~~~~--~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~l 229 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIY-DVKGQV--VFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVLI 229 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCC-EEECCC--CCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCEE
T ss_pred HHHHhhccCcCCEEECCCCcCc-cccccc--ccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccch
Confidence 87774 7899999999999999 666554 489999999999999965 55589999999999999999863
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=3.5e-24 Score=225.52 Aligned_cols=201 Identities=20% Similarity=0.188 Sum_probs=179.5
Q ss_pred cceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEE
Q 041249 554 AQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIG 633 (789)
Q Consensus 554 c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ 633 (789)
+.+++.++...+.+.. .+..+. +.++.|+|++|+|++..+..|..+++|++|+|++|.|++..+ ...+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEE
T ss_pred cCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEE
Confidence 4456777777777663 333333 689999999999998889999999999999999999996543 37899999999
Q ss_pred cccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccc
Q 041249 634 LAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSG 713 (789)
Q Consensus 634 l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 713 (789)
|++|+|+ .+|..+..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCc
Confidence 9999999 788889999999999999999998888999999999999999999998888889999999999999999997
Q ss_pred cCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccc
Q 041249 714 IVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITG 762 (789)
Q Consensus 714 ~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~ 762 (789)
..+..|..+++|+.|+|++|+|+ .+|..++ .+++|+.|+|++|++..
T Consensus 163 l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~-~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 163 LPAGLLNGLENLDTLLLQENSLY-TIPKGFF-GSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCC-CCCTTTT-TTCCCSEEECCSCCBCC
T ss_pred cCHHHhcCcCCCCEEECCCCcCC-ccChhhc-ccccCCeEEeCCCCccC
Confidence 77778889999999999999999 9999998 78899999999999864
No 329
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=7.2e-24 Score=218.47 Aligned_cols=181 Identities=21% Similarity=0.242 Sum_probs=161.9
Q ss_pred cccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEc
Q 041249 579 SFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSL 658 (789)
Q Consensus 579 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 658 (789)
...++++++++.++ .+|..+. ++++.|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 45678999999999 5666554 58999999999999888889999999999999999999888888999999999999
Q ss_pred cCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCccccc
Q 041249 659 GFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGN 738 (789)
Q Consensus 659 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 738 (789)
++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~ 169 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-S 169 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-C
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC-c
Confidence 999999888888999999999999999999777777899999999999999999777778999999999999999999 6
Q ss_pred CCcccccCCCCccEEEccCCccccc
Q 041249 739 IPLDYGFTLQNLQYFSIGTNRITGA 763 (789)
Q Consensus 739 ip~~~~~~l~~L~~L~L~~N~l~~~ 763 (789)
+|...+..+++|++|+|++|+++..
T Consensus 170 ~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 170 VPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCHHHHhCCCCCCEEEeeCCceeCC
Confidence 7766666899999999999999865
No 330
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.91 E-value=2.3e-27 Score=276.25 Aligned_cols=229 Identities=12% Similarity=0.059 Sum_probs=148.0
Q ss_pred cccceeeEeccCccccccccc-ccccCccccchhcccCCcccc-cCcccccCccceeeeccc-----------CCCCccC
Q 041249 552 SKAQKVTILDLESLKLAGSIL-PHIGNLSFLKILNLENNSFTH-EIPSEIGRLRRLQVPDLN-----------NNSIGGE 618 (789)
Q Consensus 552 ~~c~~l~~l~l~s~~~~~~~l-~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls-----------~N~i~~~ 618 (789)
..|.+++.+++..+.+....+ ..+..+++|++|+++ |.+.. .++..+..+++|++|+++ .|.+++.
T Consensus 290 ~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~ 368 (592)
T 3ogk_B 290 PFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQR 368 (592)
T ss_dssp GGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHH
T ss_pred hhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHH
Confidence 345667777777777443333 335678888888888 44443 334444667788888888 3566643
Q ss_pred CC-ccCcCCCCCcEEEcccCCCCCCCCcccCC-CCCCcEEEcc----CCCCCcc-----CCcCCCCCCCCCEEEccCC--
Q 041249 619 IP-VNLSSCSNLIRIGLAKNQLMGKIPSDFGS-LSKIEVLSLG----FNNLIGS-----IPPPLGNLSSLRKISLAIN-- 685 (789)
Q Consensus 619 ~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~~~~l~~L~~L~L~~N-- 685 (789)
.. ..+..+++|++|+++.|++++..+..+.. +++|+.|+++ .|++++. ++..+.++++|++|+|+.|
T Consensus 369 ~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~ 448 (592)
T 3ogk_B 369 GLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQG 448 (592)
T ss_dssp HHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGG
T ss_pred HHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCC
Confidence 22 22345788888888888887655555544 7788888885 6677643 2223556788888888743
Q ss_pred cCCccCCcccc-CCCCCCeeeccCccccc-cCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCccccc
Q 041249 686 NLAGSIPFTLS-KLKNLVILYLGVNRLSG-IVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGA 763 (789)
Q Consensus 686 ~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~ 763 (789)
.+++..+..+. .+++|++|+|++|++++ .++..+..+++|+.|+|++|.|++.....+...+++|++|+|++|++++.
T Consensus 449 ~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 449 GLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp GCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 36654444443 47788888888888875 34455577788888888888876543444444678888888888888765
Q ss_pred Cccccc-CCCCCCeeeccC
Q 041249 764 IPPSIS-NASKLEVFQALN 781 (789)
Q Consensus 764 ~~~~~~-~l~~L~~L~l~~ 781 (789)
....+. .++.+....+..
T Consensus 529 ~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 529 GQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp CTTGGGGCCTTEEEEEECC
T ss_pred HHHHHHHhCCCcEEEEecC
Confidence 433333 456655555444
No 331
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=4.8e-25 Score=249.44 Aligned_cols=198 Identities=18% Similarity=0.182 Sum_probs=177.3
Q ss_pred cCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcE
Q 041249 576 GNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEV 655 (789)
Q Consensus 576 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 655 (789)
..+++|++|+|++|.|++..|..|..+++|++|+|++|.|++..| |..+++|++|+|++|.|++..+ .++|++
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 345699999999999999889999999999999999999997765 9999999999999999985433 389999
Q ss_pred EEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCcccc-CCCCccEEEccCCc
Q 041249 656 LSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIF-NISSIAEFDVGENK 734 (789)
Q Consensus 656 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~ 734 (789)
|++++|+|++..+.. +++|++|+|++|+|++..|..|+++++|+.|+|++|.|++..|..+. .+++|+.|+|++|.
T Consensus 104 L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 999999999776654 57899999999999998899999999999999999999998888887 79999999999999
Q ss_pred ccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCccc
Q 041249 735 IQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGE 787 (789)
Q Consensus 735 l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 787 (789)
|+ .+|... .+++|++|+|++|.|++.+| .+..+++|+.|+|++|+|++.
T Consensus 181 l~-~~~~~~--~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~l 229 (487)
T 3oja_A 181 IY-DVKGQV--VFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLI 229 (487)
T ss_dssp CC-EEECCC--CCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEE
T ss_pred cc-cccccc--cCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCccc
Confidence 99 555544 58999999999999997554 589999999999999999974
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=2.1e-24 Score=220.74 Aligned_cols=198 Identities=17% Similarity=0.141 Sum_probs=175.3
Q ss_pred hhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCC-CCCCCCcccCCCCCCcEEEccC-
Q 041249 583 ILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQ-LMGKIPSDFGSLSKIEVLSLGF- 660 (789)
Q Consensus 583 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~L~~- 660 (789)
.+++..+.++ .+|. +.. +|++|++++|+|+++.+..|.++++|++|++++|+ ++.+.+..|.++++|++|++++
T Consensus 15 ~~~v~c~~l~-~ip~-~~~--~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~ 90 (239)
T 2xwt_C 15 DFRVTCKDIQ-RIPS-LPP--STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNT 90 (239)
T ss_dssp TTEEEECSCS-SCCC-CCT--TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEE
T ss_pred cceeEccCcc-ccCC-CCC--cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCC
Confidence 3343344466 4565 433 89999999999998888899999999999999997 9877777899999999999999
Q ss_pred CCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCC---eeeccCc-cccccCCccccCCCCcc-EEEccCCcc
Q 041249 661 NNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLV---ILYLGVN-RLSGIVPSSIFNISSIA-EFDVGENKI 735 (789)
Q Consensus 661 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l 735 (789)
|++++..+..|.++++|++|+|++|++++ +|. |..+++|+ +|++++| ++++..+..|..+++|+ .|++++|+|
T Consensus 91 n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 91 RNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp TTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 99998888899999999999999999995 676 99999998 9999999 99988788899999999 999999999
Q ss_pred cccCCcccccCCCCccEEEccCCc-ccccCcccccCC-CCCCeeeccCCcCcccC
Q 041249 736 QGNIPLDYGFTLQNLQYFSIGTNR-ITGAIPPSISNA-SKLEVFQALNNKLTGEV 788 (789)
Q Consensus 736 ~~~ip~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~ 788 (789)
+ .+|...+.. ++|++|+|++|+ +++..+..|..+ ++|+.|++++|++++..
T Consensus 169 ~-~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~ 221 (239)
T 2xwt_C 169 T-SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALP 221 (239)
T ss_dssp C-EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCC
T ss_pred c-ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCC
Confidence 9 999988844 899999999995 998888899999 99999999999998653
No 333
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=1.1e-23 Score=217.08 Aligned_cols=184 Identities=20% Similarity=0.231 Sum_probs=160.7
Q ss_pred ccc-ceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCc
Q 041249 552 SKA-QKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLI 630 (789)
Q Consensus 552 ~~c-~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~ 630 (789)
+.| .....++...+.+.. .+..+. +.|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+
T Consensus 10 C~C~~~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 86 (251)
T 3m19_A 10 CTCNEGKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86 (251)
T ss_dssp SEEEGGGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred eEcCCCCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCC
Confidence 556 345667777776653 333333 6899999999999988888899999999999999999988888899999999
Q ss_pred EEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCcc
Q 041249 631 RIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNR 710 (789)
Q Consensus 631 ~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 710 (789)
+|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 87 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 87 TLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCc
Confidence 99999999998888889999999999999999998888888999999999999999997777789999999999999999
Q ss_pred ccccCCccccCCCCccEEEccCCccccc
Q 041249 711 LSGIVPSSIFNISSIAEFDVGENKIQGN 738 (789)
Q Consensus 711 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 738 (789)
|++..+..|..+++|+.|+|++|++++.
T Consensus 167 l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 167 LQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9988888899999999999999999844
No 334
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.91 E-value=6e-24 Score=225.93 Aligned_cols=195 Identities=26% Similarity=0.385 Sum_probs=154.2
Q ss_pred ccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCc
Q 041249 575 IGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIE 654 (789)
Q Consensus 575 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 654 (789)
+.++++|++|++++|.++. +| .+..+++|++|+|++|.|++..+ +..+++|++|+|++|++++ ++ .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCC
Confidence 4567888888888888884 44 57888888888888888885443 8888888888888888884 33 588888888
Q ss_pred EEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCc
Q 041249 655 VLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENK 734 (789)
Q Consensus 655 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 734 (789)
+|+|++|++++. + .+..+++|++|+|++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|+
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 888888888754 3 37888888888888888885443 8888888888888888885433 8888888888888888
Q ss_pred ccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcc
Q 041249 735 IQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTG 786 (789)
Q Consensus 735 l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 786 (789)
|+ .++. +..+++|++|+|++|++++.. .+..+++|+.|++++|++++
T Consensus 185 l~-~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 IS-DISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CC-CCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred cC-cChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 88 5554 337888888888888888654 37888888888888888876
No 335
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.90 E-value=6.7e-27 Score=272.39 Aligned_cols=185 Identities=13% Similarity=0.035 Sum_probs=140.6
Q ss_pred cCccccchhccc-----------CCcccccCc-ccccCccceeeecccCCCCccCCCccCcC-CCCCcEEEcc----cCC
Q 041249 576 GNLSFLKILNLE-----------NNSFTHEIP-SEIGRLRRLQVPDLNNNSIGGEIPVNLSS-CSNLIRIGLA----KNQ 638 (789)
Q Consensus 576 ~~l~~L~~L~L~-----------~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~-l~~L~~L~l~----~N~ 638 (789)
..+++|++|+|+ .|.+++... ..+..+++|++|+++.|.+++..+..+.. +++|++|+++ .|.
T Consensus 339 ~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~ 418 (592)
T 3ogk_B 339 QYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREER 418 (592)
T ss_dssp HHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSC
T ss_pred HhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCcc
Confidence 357789999999 467775433 33556899999999999999877777765 8999999997 778
Q ss_pred CCCC-----CCcccCCCCCCcEEEccCCC--CCccCCcCCC-CCCCCCEEEccCCcCCcc-CCccccCCCCCCeeeccCc
Q 041249 639 LMGK-----IPSDFGSLSKIEVLSLGFNN--LIGSIPPPLG-NLSSLRKISLAINNLAGS-IPFTLSKLKNLVILYLGVN 709 (789)
Q Consensus 639 l~~~-----~~~~~~~l~~L~~L~L~~N~--l~~~~~~~~~-~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N 709 (789)
+++. ++..+.++++|+.|+|++|. +++..+..+. .+++|++|+|++|++++. ++..+.++++|++|+|++|
T Consensus 419 l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n 498 (592)
T 3ogk_B 419 ITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGC 498 (592)
T ss_dssp CSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESC
T ss_pred ccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCC
Confidence 8853 23336679999999998543 6655544443 478999999999999863 4555688999999999999
Q ss_pred ccccc-CCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcc
Q 041249 710 RLSGI-VPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRI 760 (789)
Q Consensus 710 ~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l 760 (789)
.|++. ++..+..+++|+.|+|++|++++.--..+...++.+....+..++-
T Consensus 499 ~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~~~ 550 (592)
T 3ogk_B 499 CFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRV 550 (592)
T ss_dssp CCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC--
T ss_pred CCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCccc
Confidence 98755 3445567999999999999998543444555788888877776643
No 336
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=1.4e-22 Score=202.44 Aligned_cols=181 Identities=20% Similarity=0.217 Sum_probs=151.2
Q ss_pred chhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCC
Q 041249 582 KILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFN 661 (789)
Q Consensus 582 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 661 (789)
+.++++++.++ .+|..+ .++|++|++++|+|++..+..|..+++|++|++++|+|++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45677778877 445443 357899999999998777777888999999999999998777777888999999999999
Q ss_pred CCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCCc
Q 041249 662 NLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPL 741 (789)
Q Consensus 662 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~ 741 (789)
++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 9987777778889999999999999997777778899999999999999997777778889999999999998762
Q ss_pred ccccCCCCccEEEccCCcccccCcccccCCCC
Q 041249 742 DYGFTLQNLQYFSIGTNRITGAIPPSISNASK 773 (789)
Q Consensus 742 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 773 (789)
.+++|++|+++.|++++.+|..++.++.
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 4567889999999999999988887764
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=3.1e-23 Score=220.77 Aligned_cols=202 Identities=17% Similarity=0.168 Sum_probs=174.5
Q ss_pred cceeeEeccCcccccccccccc--cCccccchhcccCCcccccCc----ccccCccceeeecccCCCCccCCCccCcCCC
Q 041249 554 AQKVTILDLESLKLAGSILPHI--GNLSFLKILNLENNSFTHEIP----SEIGRLRRLQVPDLNNNSIGGEIPVNLSSCS 627 (789)
Q Consensus 554 c~~l~~l~l~s~~~~~~~l~~l--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~ 627 (789)
+.+++.+++..+.+....+..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|+|++..|..|..++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4569999999999988888888 899999999999999997655 4466899999999999999988889999999
Q ss_pred CCcEEEcccCCCCCC----CCcccCCCCCCcEEEccCCCCCccCCc----CCCCCCCCCEEEccCCcCCccCCccccCC-
Q 041249 628 NLIRIGLAKNQLMGK----IPSDFGSLSKIEVLSLGFNNLIGSIPP----PLGNLSSLRKISLAINNLAGSIPFTLSKL- 698 (789)
Q Consensus 628 ~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~l- 698 (789)
+|++|+|++|++.+. .+..+..+++|++|+|++|+++. ++. .+..+++|++|+|++|+|++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 999999999998642 23345789999999999999973 333 35788999999999999998878888777
Q ss_pred --CCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccc
Q 041249 699 --KNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITG 762 (789)
Q Consensus 699 --~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~ 762 (789)
++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|. +..+++|++|+|++|+|+.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~-~~~~--~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLN-RAPQ--PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCC-SCCC--TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCC-CCch--hhhCCCccEEECcCCCCCC
Confidence 69999999999999 6777775 79999999999999 6665 3478999999999999984
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=7.3e-25 Score=241.05 Aligned_cols=242 Identities=17% Similarity=0.205 Sum_probs=198.3
Q ss_pred HHhhccccceeeEeccCcccccccccc----cccCccccchhcccCC---cccccCcccc-------cCccceeeecccC
Q 041249 547 MLRIGSKAQKVTILDLESLKLAGSILP----HIGNLSFLKILNLENN---SFTHEIPSEI-------GRLRRLQVPDLNN 612 (789)
Q Consensus 547 l~~i~~~c~~l~~l~l~s~~~~~~~l~----~l~~l~~L~~L~L~~N---~l~~~~~~~~-------~~l~~L~~L~Ls~ 612 (789)
+.+....|.+++.+++..+.+....+. .+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 334455688899999999988766443 3678999999999996 4555566555 7889999999999
Q ss_pred CCCcc----CCCccCcCCCCCcEEEcccCCCCCCCCccc----CCC---------CCCcEEEccCCCCC-ccCC---cCC
Q 041249 613 NSIGG----EIPVNLSSCSNLIRIGLAKNQLMGKIPSDF----GSL---------SKIEVLSLGFNNLI-GSIP---PPL 671 (789)
Q Consensus 613 N~i~~----~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~----~~l---------~~L~~L~L~~N~l~-~~~~---~~~ 671 (789)
|.|++ .+|..+..+++|++|+|++|.|+...+..+ ..+ ++|++|+|++|+++ +.++ ..|
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 99997 467788999999999999999974433333 333 89999999999997 3444 467
Q ss_pred CCCCCCCEEEccCCcCCc-----cCCccccCCCCCCeeeccCcccc----ccCCccccCCCCccEEEccCCccccc----
Q 041249 672 GNLSSLRKISLAINNLAG-----SIPFTLSKLKNLVILYLGVNRLS----GIVPSSIFNISSIAEFDVGENKIQGN---- 738 (789)
Q Consensus 672 ~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~---- 738 (789)
..+++|++|+|++|+|+. ..|..+..+++|+.|+|++|.|+ ..+|..+..+++|+.|+|++|.|++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 788999999999999983 34558899999999999999996 57888999999999999999999854
Q ss_pred CCcccc-cCCCCccEEEccCCcccc----cCcccc-cCCCCCCeeeccCCcCcccC
Q 041249 739 IPLDYG-FTLQNLQYFSIGTNRITG----AIPPSI-SNASKLEVFQALNNKLTGEV 788 (789)
Q Consensus 739 ip~~~~-~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~l~~N~l~~~~ 788 (789)
+|..+. ..+++|++|+|++|+|++ .+|..+ .++++|+.|++++|++++..
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 455542 138999999999999997 477777 66899999999999999864
No 339
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.88 E-value=1.9e-23 Score=238.47 Aligned_cols=188 Identities=16% Similarity=0.147 Sum_probs=144.5
Q ss_pred CCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccch--------hhHHHHHHHHHHhcCCCCccceeeeeeccCCCC
Q 041249 271 GFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR--------ASRSFIAECRALRSIRHRNLVKVFTACSGVDYQ 342 (789)
Q Consensus 271 ~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 342 (789)
.+...+.||+|+||+||+|.+ .++.+++|........ ..+.+.+|++++++++||||+++..++....
T Consensus 337 ~~~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~-- 412 (540)
T 3en9_A 337 RKIPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD-- 412 (540)
T ss_dssp -----------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--
T ss_pred cCCCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--
Confidence 334567999999999999965 4788899886433211 1345899999999999999995555554433
Q ss_pred CCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCC
Q 041249 343 GNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEM 422 (789)
Q Consensus 343 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~ 422 (789)
..++||||+++|+|.+++.. +..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 413 ---~~~lVmE~~~ggsL~~~l~~------------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~-- 466 (540)
T 3en9_A 413 ---NKRIMMSYINGKLAKDVIED------------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK-- 466 (540)
T ss_dssp ---TTEEEEECCCSEEHHHHSTT------------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--
T ss_pred ---ccEEEEECCCCCCHHHHHHH------------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--
Confidence 56999999999999999852 4589999999999999998 999999999999999
Q ss_pred ceeeCcccccccCCCCCCcc-----ceeeecccccccCcccCCC--CCcCccccchhhHHHHHHHHHhcCCCC
Q 041249 423 VSHVGDFGLARFLPPTHVQT-----SSIGVKGSIGYIAPEYGLG--SEVSTNGDVYSYGILMLELIIRKKPSD 488 (789)
Q Consensus 423 ~~kl~Dfgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~sfGvvl~elltG~~P~~ 488 (789)
++||+|||+++......... ......||+.|||||++.. ..|+.++|+|+-.+-..+-+.++.+|.
T Consensus 467 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 467 DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 99999999999886543211 1234679999999999876 568899999999999999888887764
No 340
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.87 E-value=4.4e-25 Score=257.10 Aligned_cols=229 Identities=13% Similarity=0.095 Sum_probs=146.1
Q ss_pred ccceeeEeccCccccccccccc-ccCccccchhcccCCccccc-CcccccCccceeeecc---------cCCCCccCCCc
Q 041249 553 KAQKVTILDLESLKLAGSILPH-IGNLSFLKILNLENNSFTHE-IPSEIGRLRRLQVPDL---------NNNSIGGEIPV 621 (789)
Q Consensus 553 ~c~~l~~l~l~s~~~~~~~l~~-l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L---------s~N~i~~~~p~ 621 (789)
.|.+++.+++..+.+....+.. +..+++|++|++++| ++.. ++.....+++|++|++ +.|.+++....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 5677888888877744333332 457788888888877 4422 2222334777888877 33555543333
Q ss_pred cCc-CCCCCcEEEcccCCCCCCCCcccC-CCCCCcEEEcc--C----CCCCccCC-----cCCCCCCCCCEEEccCCcCC
Q 041249 622 NLS-SCSNLIRIGLAKNQLMGKIPSDFG-SLSKIEVLSLG--F----NNLIGSIP-----PPLGNLSSLRKISLAINNLA 688 (789)
Q Consensus 622 ~~~-~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~~~-----~~~~~l~~L~~L~L~~N~l~ 688 (789)
.+. ++++|++|+++.|.+++.....+. .+++|+.|+|+ + |+++.... ..+..+++|++|+|++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 332 477888888888888754444443 47788888888 3 55552211 1245677888888876 666
Q ss_pred ccCCccccC-CCCCCeeeccCccccccCCccc-cCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcc
Q 041249 689 GSIPFTLSK-LKNLVILYLGVNRLSGIVPSSI-FNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPP 766 (789)
Q Consensus 689 ~~~~~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~ 766 (789)
+..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++.....+...+++|++|++++|+++.....
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 524 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACK 524 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHH
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHH
Confidence 555555554 7788888888888876555554 56788888888888886444444444577888888888887644334
Q ss_pred cc-cCCCCCCeeeccCCc
Q 041249 767 SI-SNASKLEVFQALNNK 783 (789)
Q Consensus 767 ~~-~~l~~L~~L~l~~N~ 783 (789)
.+ ..+++|+...+..+.
T Consensus 525 ~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 525 LLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp HHHHHCTTEEEEEECSSS
T ss_pred HHHHhCCCCEEEEecCCC
Confidence 44 456777666665553
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=3.7e-22 Score=212.12 Aligned_cols=192 Identities=21% Similarity=0.356 Sum_probs=167.1
Q ss_pred cceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEE
Q 041249 554 AQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIG 633 (789)
Q Consensus 554 c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ 633 (789)
+.+++.+++..+.+.. .+.+..+++|++|+|++|++++..+ +..+++|++|+|++|+|++. ..+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~--l~~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT--IEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC--CTTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC--chhhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEE
Confidence 4567788888887654 3468899999999999999996555 99999999999999999954 4799999999999
Q ss_pred cccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccc
Q 041249 634 LAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSG 713 (789)
Q Consensus 634 l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 713 (789)
+++|++++ ++ .+..+++|++|++++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|++++|++++
T Consensus 114 l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 99999995 44 38999999999999999986544 8899999999999999995443 9999999999999999996
Q ss_pred cCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccc
Q 041249 714 IVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITG 762 (789)
Q Consensus 714 ~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~ 762 (789)
..+ +..+++|+.|+|++|+|+ .++. + ..+++|++|+|++|++++
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~-~~~~-l-~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQIS-DVSP-L-ANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCC-BCGG-G-TTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEEccCCccC-cccc-c-cCCCCCCEEEccCCeeec
Confidence 544 899999999999999999 5553 3 489999999999999986
No 342
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=6.1e-22 Score=226.00 Aligned_cols=190 Identities=23% Similarity=0.322 Sum_probs=115.7
Q ss_pred ccceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEE
Q 041249 553 KAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRI 632 (789)
Q Consensus 553 ~c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L 632 (789)
.|.+++.+++..+.+.. .+..+ .++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|
T Consensus 57 ~~~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L 125 (571)
T 3cvr_A 57 LINQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHL 125 (571)
T ss_dssp HHTTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEE
T ss_pred ccCCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEE
Confidence 34466666666666554 33333 256667777777766 344 335666677777777764 444 444 66777
Q ss_pred EcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCcccc
Q 041249 633 GLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLS 712 (789)
Q Consensus 633 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 712 (789)
+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+
T Consensus 126 ~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 126 DVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp ECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred ECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC
Confidence 777777664 444 45667777777777664 343 45666777777777664 454 54 66777777777766
Q ss_pred ccCCccccCCCCc-------cEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCC
Q 041249 713 GIVPSSIFNISSI-------AEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNA 771 (789)
Q Consensus 713 ~~~p~~~~~l~~L-------~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 771 (789)
.+|. |.. +| +.|+|++|+|+ .+|..++ .+++|+.|+|++|+|++.+|..+..+
T Consensus 194 -~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~-~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 194 -SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENIL-SLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp -SCCC-CC----------CCEEEECCSSCCC-CCCGGGG-GSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred -chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHh-cCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 4454 443 55 66777777776 6666666 46667777777777766666665553
No 343
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=9.4e-22 Score=196.42 Aligned_cols=173 Identities=20% Similarity=0.238 Sum_probs=155.3
Q ss_pred eeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCC
Q 041249 606 QVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAIN 685 (789)
Q Consensus 606 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 685 (789)
+.++++++.++ .+|..+ .++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 56788999998 566555 368999999999999877778999999999999999999888888999999999999999
Q ss_pred cCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCc
Q 041249 686 NLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIP 765 (789)
Q Consensus 686 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~ 765 (789)
+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|...+..+++|++|+|++|++.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~--- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDC--- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc-eeCHHHhccCCCccEEEecCCCeec---
Confidence 999777778999999999999999999877778999999999999999999 7777766689999999999998874
Q ss_pred ccccCCCCCCeeeccCCcCcccCC
Q 041249 766 PSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 766 ~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
.+++|+.|+++.|+++|.+|
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip 182 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVR 182 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBB
T ss_pred ----CCCCHHHHHHHHHhCCceee
Confidence 45689999999999999887
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=3.9e-22 Score=216.08 Aligned_cols=192 Identities=16% Similarity=0.127 Sum_probs=135.9
Q ss_pred cccchhcccCCcccccCcccccCccceeeecccCCCCccCCC-ccCcCCCCCcE-EEcccCCCCCCCCcccCCCCCCcEE
Q 041249 579 SFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIP-VNLSSCSNLIR-IGLAKNQLMGKIPSDFGSLSKIEVL 656 (789)
Q Consensus 579 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~-L~l~~N~l~~~~~~~~~~l~~L~~L 656 (789)
+++++|+|++|+|+.+.+.+|.++++|++|+|++|+|.+.+| .+|.++++|++ +.++.|+|+.+.|+.|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 567888888888886666678888888888888888765444 56777777664 5666788887777778888888888
Q ss_pred EccCCCCCccCCcCCCCCCCCCEEEccC-CcCCccCCccccCCC-CCCeeeccCccccccCCccccCCCCccEEEccC-C
Q 041249 657 SLGFNNLIGSIPPPLGNLSSLRKISLAI-NNLAGSIPFTLSKLK-NLVILYLGVNRLSGIVPSSIFNISSIAEFDVGE-N 733 (789)
Q Consensus 657 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N 733 (789)
++++|+|++..+..+....++..|++.+ |+++...+..|..+. .++.|+|++|+|+. +|.......+|++|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCC
Confidence 8888888766666666667777777754 567655566666664 57778888888874 444444556777777764 5
Q ss_pred cccccCCcccccCCCCccEEEccCCcccccCcccccCCC
Q 041249 734 KIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNAS 772 (789)
Q Consensus 734 ~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 772 (789)
.++ .||.++|.++++|++|+|++|+|+...+..|.+++
T Consensus 189 ~l~-~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~ 226 (350)
T 4ay9_X 189 NLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLK 226 (350)
T ss_dssp TCC-CCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCC
T ss_pred ccc-CCCHHHhccCcccchhhcCCCCcCccChhhhccch
Confidence 565 77777776777888888888888755444444333
No 345
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.86 E-value=1.4e-21 Score=212.59 Aligned_cols=176 Identities=19% Similarity=0.218 Sum_probs=134.9
Q ss_pred chhcccCCcccccCcccccCccceeeecccCCCCccCCCccCc-CCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccC
Q 041249 582 KILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLS-SCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGF 660 (789)
Q Consensus 582 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 660 (789)
+.+++++|+++ .+|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46788888888 4565543 3578888888888877777776 888888888888888877777788888888888888
Q ss_pred CCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccc---cCCCCccEEEccCCcccc
Q 041249 661 NNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSI---FNISSIAEFDVGENKIQG 737 (789)
Q Consensus 661 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 737 (789)
|+|++..+..|.++++|++|+|++|+|+...|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~- 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK- 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC-
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC-
Confidence 88887777778888888888888888887777888888888888888888885444444 46778888888888887
Q ss_pred cCCcccccCCCC--ccEEEccCCccc
Q 041249 738 NIPLDYGFTLQN--LQYFSIGTNRIT 761 (789)
Q Consensus 738 ~ip~~~~~~l~~--L~~L~L~~N~l~ 761 (789)
.+|...+..++. |+.|+|++|++.
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ccCHHHhhhccHhhcceEEecCCCcc
Confidence 777655556666 377888888776
No 346
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=1.7e-23 Score=227.86 Aligned_cols=236 Identities=19% Similarity=0.188 Sum_probs=188.0
Q ss_pred ccccceeeEeccCccccccccc----ccccCcc-ccchhcccCCcccccCcccccCc-----cceeeecccCCCCccCCC
Q 041249 551 GSKAQKVTILDLESLKLAGSIL----PHIGNLS-FLKILNLENNSFTHEIPSEIGRL-----RRLQVPDLNNNSIGGEIP 620 (789)
Q Consensus 551 ~~~c~~l~~l~l~s~~~~~~~l----~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~i~~~~p 620 (789)
.....+++.+++..+.+..... ..+..++ +|++|+|++|+|++..+..|..+ ++|++|+|++|+|++..+
T Consensus 18 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 97 (362)
T 3goz_A 18 TSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSS 97 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCH
T ss_pred HhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHH
Confidence 3445568999999999887776 7778888 89999999999998888888776 899999999999997766
Q ss_pred cc----CcCC-CCCcEEEcccCCCCCCCCccc----CC-CCCCcEEEccCCCCCccCCcC----CCCCC-CCCEEEccCC
Q 041249 621 VN----LSSC-SNLIRIGLAKNQLMGKIPSDF----GS-LSKIEVLSLGFNNLIGSIPPP----LGNLS-SLRKISLAIN 685 (789)
Q Consensus 621 ~~----~~~l-~~L~~L~l~~N~l~~~~~~~~----~~-l~~L~~L~L~~N~l~~~~~~~----~~~l~-~L~~L~L~~N 685 (789)
.. +..+ ++|++|+|++|+|++..+..+ .. .++|++|+|++|+++...+.. +..++ +|++|+|++|
T Consensus 98 ~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n 177 (362)
T 3goz_A 98 DELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGN 177 (362)
T ss_dssp HHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTS
T ss_pred HHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCC
Confidence 64 4444 899999999999987665443 34 369999999999998544433 34555 9999999999
Q ss_pred cCCccCCccc----cCC-CCCCeeeccCcccccc----CCccccCC-CCccEEEccCCcccccCCc----ccccCCCCcc
Q 041249 686 NLAGSIPFTL----SKL-KNLVILYLGVNRLSGI----VPSSIFNI-SSIAEFDVGENKIQGNIPL----DYGFTLQNLQ 751 (789)
Q Consensus 686 ~l~~~~~~~~----~~l-~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~Ls~N~l~~~ip~----~~~~~l~~L~ 751 (789)
+|++..+..+ ..+ ++|++|+|++|+|++. ++..+..+ ++|++|+|++|.|+ ..+. .++..+++|+
T Consensus 178 ~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~-~~~~~~l~~~~~~l~~L~ 256 (362)
T 3goz_A 178 NLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLH-GPSLENLKLLKDSLKHLQ 256 (362)
T ss_dssp CGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCC-CCCHHHHHHTTTTTTTCS
T ss_pred CCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCC-cHHHHHHHHHHhcCCCcc
Confidence 9997776544 445 6999999999999963 55666664 59999999999998 4433 3344789999
Q ss_pred EEEccCCcccccC-------cccccCCCCCCeeeccCCcCccc
Q 041249 752 YFSIGTNRITGAI-------PPSISNASKLEVFQALNNKLTGE 787 (789)
Q Consensus 752 ~L~L~~N~l~~~~-------~~~~~~l~~L~~L~l~~N~l~~~ 787 (789)
+|+|++|++.+.. +..+..+++|+.||+++|++.+.
T Consensus 257 ~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 257 TVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp EEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred EEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 9999999965443 33567888899999999999875
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=2.3e-21 Score=210.07 Aligned_cols=202 Identities=17% Similarity=0.152 Sum_probs=174.0
Q ss_pred chhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCC-CcccCCCCCCcE-EEcc
Q 041249 582 KILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKI-PSDFGSLSKIEV-LSLG 659 (789)
Q Consensus 582 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~-L~L~ 659 (789)
++++.++|+++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+ +.+|.++++|.+ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45788899999 567665 358999999999999766678999999999999999986555 457899998775 6778
Q ss_pred CCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccC-ccccccCCccccCCC-CccEEEccCCcccc
Q 041249 660 FNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGV-NRLSGIVPSSIFNIS-SIAEFDVGENKIQG 737 (789)
Q Consensus 660 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~ 737 (789)
+|+|+++.|.+|..+++|++|++++|+|+...+..+....++..|++++ |++....+..|..+. .++.|+|++|+|+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~- 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ- 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-
Confidence 8999999999999999999999999999977777888888899999966 688877777888875 6999999999999
Q ss_pred cCCcccccCCCCccEEEccC-CcccccCcccccCCCCCCeeeccCCcCcccC
Q 041249 738 NIPLDYGFTLQNLQYFSIGT-NRITGAIPPSISNASKLEVFQALNNKLTGEV 788 (789)
Q Consensus 738 ~ip~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 788 (789)
.||..+| ...+|++|++++ |.++.+.+.+|..+++|+.|||++|+|+...
T Consensus 168 ~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp 218 (350)
T 4ay9_X 168 EIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLP 218 (350)
T ss_dssp EECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCC
T ss_pred CCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccC
Confidence 9999988 678999999975 7788666678999999999999999998653
No 348
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.85 E-value=2.7e-23 Score=226.41 Aligned_cols=226 Identities=17% Similarity=0.170 Sum_probs=180.0
Q ss_pred ccCcccccccccccccCccccchhcccCCcccccCc----ccccCcc-ceeeecccCCCCccCCCccCcCC-----CCCc
Q 041249 561 DLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIP----SEIGRLR-RLQVPDLNNNSIGGEIPVNLSSC-----SNLI 630 (789)
Q Consensus 561 ~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~Ls~N~i~~~~p~~~~~l-----~~L~ 630 (789)
++..+.+.+..+..+...++|++|+|++|+|++..+ ..|..++ +|++|+|++|+|++..+..|..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 345555555555666666779999999999998777 7788888 89999999999998877777765 9999
Q ss_pred EEEcccCCCCCCCCcc----cCCC-CCCcEEEccCCCCCccCCcCC----CC-CCCCCEEEccCCcCCccCC----cccc
Q 041249 631 RIGLAKNQLMGKIPSD----FGSL-SKIEVLSLGFNNLIGSIPPPL----GN-LSSLRKISLAINNLAGSIP----FTLS 696 (789)
Q Consensus 631 ~L~l~~N~l~~~~~~~----~~~l-~~L~~L~L~~N~l~~~~~~~~----~~-l~~L~~L~L~~N~l~~~~~----~~~~ 696 (789)
+|+|++|+|++..+.. +..+ ++|++|+|++|+|++..+..+ .. .++|++|+|++|+|+...+ ..+.
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~ 163 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILA 163 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHh
Confidence 9999999999766664 4444 899999999999987766554 34 3699999999999995443 3445
Q ss_pred CCC-CCCeeeccCccccccCCcccc----CC-CCccEEEccCCccccc----CCcccccCCCCccEEEccCCcccccCc-
Q 041249 697 KLK-NLVILYLGVNRLSGIVPSSIF----NI-SSIAEFDVGENKIQGN----IPLDYGFTLQNLQYFSIGTNRITGAIP- 765 (789)
Q Consensus 697 ~l~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----ip~~~~~~l~~L~~L~L~~N~l~~~~~- 765 (789)
.++ +|++|+|++|+|++..+..+. .+ ++|+.|||++|.|++. ++..+....++|++|+|++|+|++..+
T Consensus 164 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 243 (362)
T 3goz_A 164 AIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLE 243 (362)
T ss_dssp TSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHH
T ss_pred cCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHH
Confidence 665 999999999999977765444 44 5999999999999841 566665335699999999999997655
Q ss_pred ---ccccCCCCCCeeeccCCcCcc
Q 041249 766 ---PSISNASKLEVFQALNNKLTG 786 (789)
Q Consensus 766 ---~~~~~l~~L~~L~l~~N~l~~ 786 (789)
..+..+++|+.|+|++|++++
T Consensus 244 ~l~~~~~~l~~L~~L~L~~n~l~~ 267 (362)
T 3goz_A 244 NLKLLKDSLKHLQTVYLDYDIVKN 267 (362)
T ss_dssp HHHHTTTTTTTCSEEEEEHHHHTT
T ss_pred HHHHHHhcCCCccEEEeccCCccc
Confidence 345677999999999998554
No 349
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.85 E-value=3.9e-21 Score=202.37 Aligned_cols=175 Identities=23% Similarity=0.293 Sum_probs=141.8
Q ss_pred cccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCC
Q 041249 574 HIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKI 653 (789)
Q Consensus 574 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 653 (789)
.+..+++|++|++++|.+++. + .+..+++|++|+|++|+|++..+ +..+++|++|++++|++++ ++ .+..+++|
T Consensus 41 ~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L 114 (291)
T 1h6t_A 41 TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKL 114 (291)
T ss_dssp CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTC
T ss_pred chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCC
Confidence 345688888999999988854 3 37888889999999999986544 8888999999999999884 33 48888899
Q ss_pred cEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCC
Q 041249 654 EVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGEN 733 (789)
Q Consensus 654 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 733 (789)
++|+|++|++++. ..+..+++|++|+|++|++++. ..+..+++|++|+|++|+|++..| +..+++|+.|+|++|
T Consensus 115 ~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N 188 (291)
T 1h6t_A 115 KSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 188 (291)
T ss_dssp CEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCC
Confidence 9999999998854 4678888999999999998854 578888899999999999986544 888889999999999
Q ss_pred cccccCCcccccCCCCccEEEccCCccccc
Q 041249 734 KIQGNIPLDYGFTLQNLQYFSIGTNRITGA 763 (789)
Q Consensus 734 ~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~ 763 (789)
.|+ .+|. + ..+++|+.|++++|+++..
T Consensus 189 ~i~-~l~~-l-~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 189 HIS-DLRA-L-AGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CCC-BCGG-G-TTCTTCSEEEEEEEEEECC
T ss_pred cCC-CChh-h-ccCCCCCEEECcCCcccCC
Confidence 988 6664 3 4788899999999988854
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=2.6e-21 Score=220.79 Aligned_cols=181 Identities=22% Similarity=0.325 Sum_probs=157.2
Q ss_pred ccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEcc
Q 041249 580 FLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLG 659 (789)
Q Consensus 580 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~ 659 (789)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999997 666553 78999999999999 667 457999999999999996 776 665 99999999
Q ss_pred CCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccC
Q 041249 660 FNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNI 739 (789)
Q Consensus 660 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i 739 (789)
+|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999996 555 68999999999999995 665 67899999999999996 676 65 89999999999999 99
Q ss_pred CcccccCCCCc-------cEEEccCCcccccCcccccCCCCCCeeeccCCcCcccCC
Q 041249 740 PLDYGFTLQNL-------QYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTGEVP 789 (789)
Q Consensus 740 p~~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~P 789 (789)
|. +. . +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|
T Consensus 196 p~-~~-~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 196 PA-VP-V--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC-----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred hh-HH-H--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 98 54 2 77 99999999999 578888889999999999999998654
No 351
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.85 E-value=5.5e-24 Score=247.85 Aligned_cols=210 Identities=12% Similarity=0.048 Sum_probs=146.4
Q ss_pred hccccceeeEeccCcccccccccccc-cCccccchhcc---------cCCcccccCccccc-CccceeeecccCCCCccC
Q 041249 550 IGSKAQKVTILDLESLKLAGSILPHI-GNLSFLKILNL---------ENNSFTHEIPSEIG-RLRRLQVPDLNNNSIGGE 618 (789)
Q Consensus 550 i~~~c~~l~~l~l~s~~~~~~~l~~l-~~l~~L~~L~L---------~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~i~~~ 618 (789)
+...|.+++.+++..+ ........+ ..+++|++|++ ..+.+++.....+. .+++|++|+++.|.+++.
T Consensus 309 ~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~ 387 (594)
T 2p1m_B 309 LLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNA 387 (594)
T ss_dssp HHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHH
T ss_pred HHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHH
Confidence 3446677778887776 322223333 34788999988 34566654444443 478899999999999866
Q ss_pred CCccCc-CCCCCcEEEcc--c----CCCCCCCC-----cccCCCCCCcEEEccCCCCCccCCcCCCC-CCCCCEEEccCC
Q 041249 619 IPVNLS-SCSNLIRIGLA--K----NQLMGKIP-----SDFGSLSKIEVLSLGFNNLIGSIPPPLGN-LSSLRKISLAIN 685 (789)
Q Consensus 619 ~p~~~~-~l~~L~~L~l~--~----N~l~~~~~-----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~~N 685 (789)
.+..+. .+++|++|+++ + |.++.... ..+..+++|+.|+|++ +++...+..+.. +++|++|+|++|
T Consensus 388 ~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~ 466 (594)
T 2p1m_B 388 ALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFA 466 (594)
T ss_dssp HHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCC
Confidence 555554 58899999999 4 56663211 1256778999999977 676655555554 788999999999
Q ss_pred cCCccCCccc-cCCCCCCeeeccCccccccCCc-cccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCccc
Q 041249 686 NLAGSIPFTL-SKLKNLVILYLGVNRLSGIVPS-SIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRIT 761 (789)
Q Consensus 686 ~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~ 761 (789)
.+++..+..+ ..+++|++|+|++|.+++.... .+..+++|+.|++++|+++..-...+...+++|+...+..+.-.
T Consensus 467 ~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~ 544 (594)
T 2p1m_B 467 GDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAP 544 (594)
T ss_dssp CSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCG
T ss_pred CCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCcc
Confidence 9976555555 6789999999999999754443 34558899999999999864333334346788888777776543
No 352
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=3.5e-21 Score=209.45 Aligned_cols=175 Identities=21% Similarity=0.245 Sum_probs=126.5
Q ss_pred EeccCcccccccccccccCccccchhcccCCcccccCccccc-CccceeeecccCCCCccCCCccCcCCCCCcEEEcccC
Q 041249 559 ILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIG-RLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKN 637 (789)
Q Consensus 559 ~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N 637 (789)
.++...+.+.. .|..+. +.++.|+|++|+|++..+..|. .+++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 44555554442 233322 3467788888888877777676 7888888888888888776777888888888888888
Q ss_pred CCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccc---cCCCCCCeeeccCcccccc
Q 041249 638 QLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTL---SKLKNLVILYLGVNRLSGI 714 (789)
Q Consensus 638 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~ 714 (789)
+|+...+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..| ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 8876666677888888888888888887777788888888888888888875444445 5677888888888888865
Q ss_pred CCccccCCCC--ccEEEccCCccc
Q 041249 715 VPSSIFNISS--IAEFDVGENKIQ 736 (789)
Q Consensus 715 ~p~~~~~l~~--L~~L~Ls~N~l~ 736 (789)
.+..|..++. ++.|+|++|++.
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CHHHhhhccHhhcceEEecCCCcc
Confidence 5567777776 477888888876
No 353
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=9e-23 Score=219.80 Aligned_cols=228 Identities=15% Similarity=0.165 Sum_probs=182.7
Q ss_pred ceeeEeccCcccccccccccccCccccchhcccCCccccc-CcccccCccceeeecccCCCCccCCCccCcCCCCCcEEE
Q 041249 555 QKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHE-IPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIG 633 (789)
Q Consensus 555 ~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ 633 (789)
.++..+++..+.+....+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..+..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4567777888777655444 66789999999999999866 788889999999999999999888888899999999999
Q ss_pred cccC-CCCCC-CCcccCCCCCCcEEEccCC-CCCcc-CCcCCCCCC-CCCEEEccCC--cCC-ccCCccccCCCCCCeee
Q 041249 634 LAKN-QLMGK-IPSDFGSLSKIEVLSLGFN-NLIGS-IPPPLGNLS-SLRKISLAIN--NLA-GSIPFTLSKLKNLVILY 705 (789)
Q Consensus 634 l~~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~L~~N--~l~-~~~~~~~~~l~~L~~L~ 705 (789)
+++| .+++. ++..+..+++|++|++++| ++++. ++..+..++ +|++|+|++| .++ +.+|..+.++++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 9999 67752 5666788999999999999 88854 566678888 9999999999 455 45677788899999999
Q ss_pred ccCcc-ccccCCccccCCCCccEEEccCCcccccCCcc--cccCCCCccEEEccCCcccccCcccccCC-CCCCeeeccC
Q 041249 706 LGVNR-LSGIVPSSIFNISSIAEFDVGENKIQGNIPLD--YGFTLQNLQYFSIGTNRITGAIPPSISNA-SKLEVFQALN 781 (789)
Q Consensus 706 Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l~~ 781 (789)
+++|. +++..+..+..+++|+.|+|++|. . ..+.. .+..+++|++|+|++| ++. ..+..+ .++..|++++
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~-~-~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~ 302 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCY-D-IIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINC 302 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCT-T-CCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESC
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCC-C-CCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEec
Confidence 99999 777778889999999999999995 1 22331 2347899999999999 543 334444 2477788999
Q ss_pred CcCcccCC
Q 041249 782 NKLTGEVP 789 (789)
Q Consensus 782 N~l~~~~P 789 (789)
|++++..|
T Consensus 303 n~l~~~~~ 310 (336)
T 2ast_B 303 SHFTTIAR 310 (336)
T ss_dssp CCSCCTTC
T ss_pred ccCccccC
Confidence 99999766
No 354
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=4.6e-23 Score=226.65 Aligned_cols=216 Identities=18% Similarity=0.246 Sum_probs=179.8
Q ss_pred cccccccCccccchhcccCCcccccCc----ccccCccceeeecccCC---CCccCCCccC-------cCCCCCcEEEcc
Q 041249 570 SILPHIGNLSFLKILNLENNSFTHEIP----SEIGRLRRLQVPDLNNN---SIGGEIPVNL-------SSCSNLIRIGLA 635 (789)
Q Consensus 570 ~~l~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N---~i~~~~p~~~-------~~l~~L~~L~l~ 635 (789)
.....+..+++|++|+|++|+|+...+ ..|..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 445677788999999999999997644 44778999999999996 4555566555 789999999999
Q ss_pred cCCCCC----CCCcccCCCCCCcEEEccCCCCCccCCcCCCC----C---------CCCCEEEccCCcCC-ccCC---cc
Q 041249 636 KNQLMG----KIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGN----L---------SSLRKISLAINNLA-GSIP---FT 694 (789)
Q Consensus 636 ~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----l---------~~L~~L~L~~N~l~-~~~~---~~ 694 (789)
+|+|+. .+|..+..+++|++|+|++|.++...+..+.. + ++|++|+|++|+|+ ..++ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 999996 36778889999999999999997554444433 3 89999999999997 3444 46
Q ss_pred ccCCCCCCeeeccCccccc-----cCCccccCCCCccEEEccCCccc----ccCCcccccCCCCccEEEccCCccccc--
Q 041249 695 LSKLKNLVILYLGVNRLSG-----IVPSSIFNISSIAEFDVGENKIQ----GNIPLDYGFTLQNLQYFSIGTNRITGA-- 763 (789)
Q Consensus 695 ~~~l~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~ip~~~~~~l~~L~~L~L~~N~l~~~-- 763 (789)
|..+++|++|+|++|+|+. ..|..+..+++|+.|+|++|.|+ +.+|..+. .+++|++|+|++|+|++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~-~~~~L~~L~L~~n~i~~~~~ 261 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALK-SWPNLRELGLNDCLLSARGA 261 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGG-GCTTCCEEECTTCCCCHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHc-cCCCcCEEECCCCCCchhhH
Confidence 7789999999999999983 34558899999999999999996 57887666 899999999999999976
Q ss_pred --CcccccC--CCCCCeeeccCCcCcc
Q 041249 764 --IPPSISN--ASKLEVFQALNNKLTG 786 (789)
Q Consensus 764 --~~~~~~~--l~~L~~L~l~~N~l~~ 786 (789)
++..+.. +++|+.|+|++|++++
T Consensus 262 ~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 262 AAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp HHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred HHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 5666644 8999999999999987
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=3.5e-21 Score=202.78 Aligned_cols=189 Identities=22% Similarity=0.314 Sum_probs=97.5
Q ss_pred cchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccC
Q 041249 581 LKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGF 660 (789)
Q Consensus 581 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 660 (789)
+..+.+..+.+++..+ +..+++|+.|++++|.|+.. + .+..+++|++|++++|++++..+ +..+++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 3344444554443221 23455555555555555522 2 35555555555555555553322 55555555555555
Q ss_pred CCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCC
Q 041249 661 NNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIP 740 (789)
Q Consensus 661 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip 740 (789)
|++++. ..+..+++|++|+|++|+|++. ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|+|+ .++
T Consensus 100 n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~-~~~ 172 (291)
T 1h6t_A 100 NKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS-DIV 172 (291)
T ss_dssp SCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC-CCG
T ss_pred CcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccc-cch
Confidence 555532 2255555555555555555532 2455555555555555555533 34555555555555555555 333
Q ss_pred cccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcc
Q 041249 741 LDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTG 786 (789)
Q Consensus 741 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 786 (789)
. +..+++|++|+|++|+|++. + .+..+++|+.|++++|+++.
T Consensus 173 ~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 173 P--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred h--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 2 22555555555555555532 2 25555555555555555543
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=1.3e-20 Score=189.70 Aligned_cols=152 Identities=24% Similarity=0.293 Sum_probs=131.8
Q ss_pred chhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCC
Q 041249 582 KILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFN 661 (789)
Q Consensus 582 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 661 (789)
+.+++++|.++ .+|..+. ++|+.|+|++|+|+++.+..|..+++|++|+|++|+|++..|+.|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46788888888 4565543 67899999999999777778999999999999999999888888999999999999999
Q ss_pred CCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCccc
Q 041249 662 NLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQ 736 (789)
Q Consensus 662 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 736 (789)
+|+++.+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 999777777888999999999999999888888999999999999999999777778888999999999999987
No 357
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=3.1e-22 Score=215.56 Aligned_cols=224 Identities=17% Similarity=0.190 Sum_probs=188.2
Q ss_pred eeEeccCcccccccccccccCc--cccchhcccCCcccccCcccccCccceeeecccCCCCccC-CCccCcCCCCCcEEE
Q 041249 557 VTILDLESLKLAGSILPHIGNL--SFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGE-IPVNLSSCSNLIRIG 633 (789)
Q Consensus 557 l~~l~l~s~~~~~~~l~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~-~p~~~~~l~~L~~L~ 633 (789)
++.+++..+.+. +..+..+ +.++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 556666666554 3455666 8999999999999977666 56799999999999999866 788899999999999
Q ss_pred cccCCCCCCCCcccCCCCCCcEEEccCC-CCCcc-CCcCCCCCCCCCEEEccCC-cCCcc-CCccccCCC-CCCeeeccC
Q 041249 634 LAKNQLMGKIPSDFGSLSKIEVLSLGFN-NLIGS-IPPPLGNLSSLRKISLAIN-NLAGS-IPFTLSKLK-NLVILYLGV 708 (789)
Q Consensus 634 l~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~Ls~ 708 (789)
+++|++++..+..+..+++|++|+|++| .+++. ++..+.++++|++|+|++| .+++. ++..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 9999999878888999999999999999 78753 5666888999999999999 99864 577789999 999999999
Q ss_pred c--ccc-ccCCccccCCCCccEEEccCCc-ccccCCcccccCCCCccEEEccCCc-ccccCcccccCCCCCCeeeccCCc
Q 041249 709 N--RLS-GIVPSSIFNISSIAEFDVGENK-IQGNIPLDYGFTLQNLQYFSIGTNR-ITGAIPPSISNASKLEVFQALNNK 783 (789)
Q Consensus 709 N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~ip~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~N~ 783 (789)
| .++ +.+|..+..+++|+.|+|++|. +++..+..+. .+++|++|+|++|. ++......+..+++|+.|++++|
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~-~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF-QLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGG-GCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHh-CCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 9 555 4677888899999999999999 7766777665 89999999999995 44332336888999999999999
Q ss_pred Ccc
Q 041249 784 LTG 786 (789)
Q Consensus 784 l~~ 786 (789)
++.
T Consensus 283 i~~ 285 (336)
T 2ast_B 283 VPD 285 (336)
T ss_dssp SCT
T ss_pred cCH
Confidence 654
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=2.9e-20 Score=187.17 Aligned_cols=153 Identities=21% Similarity=0.298 Sum_probs=135.6
Q ss_pred eeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCC
Q 041249 606 QVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAIN 685 (789)
Q Consensus 606 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 685 (789)
+.+++++|.++ .+|..+. ++|++|+|++|+|+++.+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57899999998 6676654 68999999999999877778999999999999999999888999999999999999999
Q ss_pred cCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccc
Q 041249 686 NLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITG 762 (789)
Q Consensus 686 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~ 762 (789)
+|+...+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|+ .++...+..+++|++|+|++|++..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC-EECHHHHhCCCCCCEEEeCCCCcCC
Confidence 999777777899999999999999999888899999999999999999998 7777666689999999999999864
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=189.92 Aligned_cols=158 Identities=19% Similarity=0.208 Sum_probs=136.4
Q ss_pred chhcccCCcccccCcccccCccceeeecccCCCCccCCC-ccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccC
Q 041249 582 KILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIP-VNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGF 660 (789)
Q Consensus 582 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 660 (789)
+++++++|.++. +|..+. ..+++|+|++|+|++..| ..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 478899999984 566553 356899999999997755 4588999999999999999987888899999999999999
Q ss_pred CCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCC
Q 041249 661 NNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIP 740 (789)
Q Consensus 661 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip 740 (789)
|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99998888889999999999999999998888999999999999999999998889999999999999999999986555
Q ss_pred cc
Q 041249 741 LD 742 (789)
Q Consensus 741 ~~ 742 (789)
..
T Consensus 171 l~ 172 (220)
T 2v70_A 171 LA 172 (220)
T ss_dssp GH
T ss_pred hH
Confidence 43
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=1.6e-20 Score=216.62 Aligned_cols=179 Identities=22% Similarity=0.288 Sum_probs=148.6
Q ss_pred cccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCC
Q 041249 574 HIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKI 653 (789)
Q Consensus 574 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 653 (789)
.+..+++|+.|+|++|.|+. ++ .|..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++ +| .+..+++|
T Consensus 38 ~~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L 111 (605)
T 1m9s_A 38 TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKL 111 (605)
T ss_dssp CHHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTC
T ss_pred chhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCC
Confidence 35678889999999999984 34 48889999999999999986554 8899999999999999984 44 68889999
Q ss_pred cEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCC
Q 041249 654 EVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGEN 733 (789)
Q Consensus 654 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 733 (789)
+.|+|++|+|++. ..+..+++|+.|+|++|+|++. ..|..+++|+.|+|++|+|++..| +..+++|+.|+|++|
T Consensus 112 ~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 185 (605)
T 1m9s_A 112 KSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 185 (605)
T ss_dssp CEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred CEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCC
Confidence 9999999999853 4588899999999999999854 578899999999999999997655 889999999999999
Q ss_pred cccccCCcccccCCCCccEEEccCCcccccCccc
Q 041249 734 KIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPS 767 (789)
Q Consensus 734 ~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~ 767 (789)
+|+ .+| .+ ..+++|+.|+|++|++++.....
T Consensus 186 ~i~-~l~-~l-~~l~~L~~L~L~~N~l~~~p~~~ 216 (605)
T 1m9s_A 186 HIS-DLR-AL-AGLKNLDVLELFSQECLNKPINH 216 (605)
T ss_dssp CCC-BCG-GG-TTCTTCSEEECCSEEEECCCCCC
T ss_pred CCC-CCh-HH-ccCCCCCEEEccCCcCcCCcccc
Confidence 998 554 34 37899999999999988654333
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=5e-20 Score=186.72 Aligned_cols=155 Identities=21% Similarity=0.247 Sum_probs=137.5
Q ss_pred eeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccC
Q 041249 605 LQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAI 684 (789)
Q Consensus 605 L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 684 (789)
-+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 567899999998 6676554 8999999999999988888999999999999999999877778889999999999999
Q ss_pred CcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccC
Q 041249 685 NNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAI 764 (789)
Q Consensus 685 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~ 764 (789)
|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|...+..+++|+.|+|++|++....
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC-ccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 9999777778899999999999999999 78888999999999999999998 777776668999999999999988543
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=3.1e-20 Score=187.01 Aligned_cols=154 Identities=19% Similarity=0.253 Sum_probs=131.6
Q ss_pred eeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCC-cccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccC
Q 041249 606 QVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIP-SDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAI 684 (789)
Q Consensus 606 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 684 (789)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..+ ..|..+++|+.|+|++|+|+++.+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 58899999998 5676654 456899999999997654 4588899999999999999988888999999999999999
Q ss_pred CcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCccccc
Q 041249 685 NNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGA 763 (789)
Q Consensus 685 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~ 763 (789)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+ ..+++|++|+|++|++...
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF-DTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTT-TTCTTCCEEECCSCCEECS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHh-cCCCCCCEEEecCcCCcCC
Confidence 99998888889999999999999999998888999999999999999999984445444 4899999999999998754
No 363
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=9.6e-20 Score=184.64 Aligned_cols=156 Identities=24% Similarity=0.268 Sum_probs=142.2
Q ss_pred cchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccC
Q 041249 581 LKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGF 660 (789)
Q Consensus 581 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 660 (789)
-+.+++++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 467999999999 5665543 7899999999999998899999999999999999999977777899999999999999
Q ss_pred CCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCC
Q 041249 661 NNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIP 740 (789)
Q Consensus 661 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip 740 (789)
|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|++.+..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999888888999999999999999999 788899999999999999999997777889999999999999999985443
No 364
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.82 E-value=7.1e-21 Score=199.06 Aligned_cols=154 Identities=19% Similarity=0.123 Sum_probs=121.6
Q ss_pred HHHHHHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccc------------------hhhHHHHHHHHHHhc
Q 041249 262 YQNLHNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH------------------RASRSFIAECRALRS 323 (789)
Q Consensus 262 ~~~~~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~ 323 (789)
...+.....-|...+.||+|+||.||+|.+ .+++.||+|+++.... .....+.+|++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 344555566777789999999999999999 6899999999964321 134568999999999
Q ss_pred CCCCccceeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCC
Q 041249 324 IRHRNLVKVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQ 403 (789)
Q Consensus 324 l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~ 403 (789)
++ | +++.+.+.. . ..++||||+++|+|.+ +... ....++.|++.||+|||..+
T Consensus 161 l~--~-~~v~~~~~~-~-----~~~lvmE~~~g~~L~~-l~~~----------------~~~~i~~qi~~~l~~lH~~g- 213 (282)
T 1zar_A 161 LQ--G-LAVPKVYAW-E-----GNAVLMELIDAKELYR-VRVE----------------NPDEVLDMILEEVAKFYHRG- 213 (282)
T ss_dssp TT--T-SSSCCEEEE-E-----TTEEEEECCCCEEGGG-CCCS----------------CHHHHHHHHHHHHHHHHHTT-
T ss_pred cc--C-CCcCeEEec-c-----ceEEEEEecCCCcHHH-cchh----------------hHHHHHHHHHHHHHHHHHCC-
Confidence 99 4 566554432 2 4699999999999998 4211 24469999999999999998
Q ss_pred CCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCC
Q 041249 404 PITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLG 461 (789)
Q Consensus 404 ~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 461 (789)
|+||||||+|||++ ++.+||+|||+|+.. ..|+|||++..
T Consensus 214 --iiHrDlkp~NILl~-~~~vkl~DFG~a~~~---------------~~~~a~e~l~r 253 (282)
T 1zar_A 214 --IVHGDLSQYNVLVS-EEGIWIIDFPQSVEV---------------GEEGWREILER 253 (282)
T ss_dssp --EECSCCSTTSEEEE-TTEEEECCCTTCEET---------------TSTTHHHHHHH
T ss_pred --CEeCCCCHHHEEEE-CCcEEEEECCCCeEC---------------CCCCHHHHHHH
Confidence 99999999999999 999999999998743 34678887643
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=4.7e-20 Score=212.76 Aligned_cols=189 Identities=23% Similarity=0.359 Sum_probs=89.5
Q ss_pred cchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccC
Q 041249 581 LKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGF 660 (789)
Q Consensus 581 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 660 (789)
+..+++..+.+....+ +..+++|+.|++++|.|+. +| .|..+++|+.|+|++|+|++..+ +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3444444444443222 3344455555555555542 22 34455555555555555553222 44555555555555
Q ss_pred CCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCC
Q 041249 661 NNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIP 740 (789)
Q Consensus 661 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip 740 (789)
|+|++ +| .|..+++|+.|+|++|+|++ + ..+..|++|+.|+|++|+|++. ..|..+++|+.|+|++|.|++..|
T Consensus 97 N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 55542 22 34455555555555555542 2 2345555555555555555532 344555555555555555542222
Q ss_pred cccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcc
Q 041249 741 LDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTG 786 (789)
Q Consensus 741 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 786 (789)
+ ..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++
T Consensus 171 --l-~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 171 --L-AGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp --G-TTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred --h-ccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 2 2455555555555555532 234455555555555555444
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=4.6e-20 Score=191.09 Aligned_cols=171 Identities=25% Similarity=0.286 Sum_probs=111.4
Q ss_pred CccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEE
Q 041249 577 NLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVL 656 (789)
Q Consensus 577 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 656 (789)
++.++..+++++|.+++. + .+..+++|++|++++|.|+ .+| .+..+++|++|+|++|+|++..+ |..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 456666777777777643 3 4666777777777777776 334 56677777777777777774333 6677777777
Q ss_pred EccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCccc
Q 041249 657 SLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQ 736 (789)
Q Consensus 657 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 736 (789)
+|++|++++. |. +.. ++|++|+|++|+|++ ++ .+..+++|+.|+|++|+|++. + .+..+++|+.|+|++|+|+
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 7777777643 32 222 677777777777764 33 467777777777777777743 3 5667777777777777776
Q ss_pred ccCCcccccCCCCccEEEccCCccccc
Q 041249 737 GNIPLDYGFTLQNLQYFSIGTNRITGA 763 (789)
Q Consensus 737 ~~ip~~~~~~l~~L~~L~L~~N~l~~~ 763 (789)
.+ ..+ ..+++|+.|+|++|++++.
T Consensus 164 -~~-~~l-~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 -NT-GGL-TRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -BC-TTS-TTCCCCCEEEEEEEEEECC
T ss_pred -ch-HHh-ccCCCCCEEeCCCCcccCC
Confidence 33 223 3677777777777777644
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.80 E-value=6.7e-20 Score=189.88 Aligned_cols=171 Identities=18% Similarity=0.274 Sum_probs=150.0
Q ss_pred CccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEE
Q 041249 601 RLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKI 680 (789)
Q Consensus 601 ~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 680 (789)
.+.++..+++++|.+++.. .+..+++|++|++++|.|+ .++ .+..+++|++|+|++|+|++..+ |..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 5778999999999999543 6889999999999999998 455 68899999999999999996654 9999999999
Q ss_pred EccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcc
Q 041249 681 SLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRI 760 (789)
Q Consensus 681 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l 760 (789)
+|++|+|++ +|. +.. ++|++|+|++|+|++. ..+..+++|+.|+|++|+|+ .+| .+ ..+++|++|+|++|+|
T Consensus 91 ~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~-~~~-~l-~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 91 SVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLK-SIV-ML-GFLSKLEVLDLHGNEI 162 (263)
T ss_dssp ECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCC-BCG-GG-GGCTTCCEEECTTSCC
T ss_pred ECCCCccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCC-CCh-HH-ccCCCCCEEECCCCcC
Confidence 999999995 443 333 8999999999999953 36999999999999999999 665 34 4899999999999999
Q ss_pred cccCcccccCCCCCCeeeccCCcCccc
Q 041249 761 TGAIPPSISNASKLEVFQALNNKLTGE 787 (789)
Q Consensus 761 ~~~~~~~~~~l~~L~~L~l~~N~l~~~ 787 (789)
++. ..+..+++|+.|++++|++++.
T Consensus 163 ~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 163 TNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred cch--HHhccCCCCCEEeCCCCcccCC
Confidence 976 7789999999999999999875
No 368
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.80 E-value=1.1e-19 Score=179.78 Aligned_cols=153 Identities=13% Similarity=0.204 Sum_probs=89.5
Q ss_pred cCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCE
Q 041249 600 GRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRK 679 (789)
Q Consensus 600 ~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 679 (789)
..+++|+.|++++|.|+ .+| .+..+++|++|++++|.++ . +..+..+++|++|++++|++++..+..|..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45566666666666666 444 4666666666666666554 2 235666666666666666666555566666666666
Q ss_pred EEccCCcCCccCCccccCCCCCCeeeccCcc-ccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCC
Q 041249 680 ISLAINNLAGSIPFTLSKLKNLVILYLGVNR-LSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTN 758 (789)
Q Consensus 680 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N 758 (789)
|+|++|++++..|..|..+++|++|++++|+ ++ .+| .+..+++|+.|++++|+|+ .++ .+. .+++|++|++++|
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~-~~~-~l~-~l~~L~~L~l~~N 191 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVH-DYR-GIE-DFPKLNQLYAFSQ 191 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCC-CCT-TGG-GCSSCCEEEECBC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCc-ChH-Hhc-cCCCCCEEEeeCc
Confidence 6666666665555566666666666666665 44 333 4555666666666666665 344 222 4555555655555
Q ss_pred ccc
Q 041249 759 RIT 761 (789)
Q Consensus 759 ~l~ 761 (789)
+|.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 554
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.80 E-value=1.3e-19 Score=179.23 Aligned_cols=156 Identities=19% Similarity=0.246 Sum_probs=136.6
Q ss_pred CcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCC
Q 041249 623 LSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLV 702 (789)
Q Consensus 623 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 702 (789)
...+++|++|++++|.|+ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..|+.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 367889999999999999 566 6889999999999999886 335789999999999999999987899999999999
Q ss_pred eeeccCccccccCCccccCCCCccEEEccCCc-ccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccC
Q 041249 703 ILYLGVNRLSGIVPSSIFNISSIAEFDVGENK-IQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALN 781 (789)
Q Consensus 703 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 781 (789)
+|+|++|++++..|..+..+++|++|+|++|+ ++ .+| .+ ..+++|++|++++|+|++. + .+..+++|+.|++++
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l-~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PL-KTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GG-GGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECB
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hh-cCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeC
Confidence 99999999998889999999999999999998 76 777 34 4899999999999999964 3 788999999999999
Q ss_pred CcCccc
Q 041249 782 NKLTGE 787 (789)
Q Consensus 782 N~l~~~ 787 (789)
|++.+.
T Consensus 191 N~i~~~ 196 (197)
T 4ezg_A 191 QTIGGK 196 (197)
T ss_dssp C-----
T ss_pred cccCCc
Confidence 999763
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=5.8e-22 Score=227.33 Aligned_cols=196 Identities=18% Similarity=0.154 Sum_probs=157.5
Q ss_pred cCccccchhcccCCcccccCcccccCccceeeecccCCC-------------CccCCCccCcCCCCCcEEE-cccCCCCC
Q 041249 576 GNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNS-------------IGGEIPVNLSSCSNLIRIG-LAKNQLMG 641 (789)
Q Consensus 576 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-------------i~~~~p~~~~~l~~L~~L~-l~~N~l~~ 641 (789)
..+++|+.|+|++|+|+ .+|..++.+++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 56888999999999998 789999999999999998775 5667788888888888888 56554331
Q ss_pred CCCc------ccCC--CCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccc
Q 041249 642 KIPS------DFGS--LSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSG 713 (789)
Q Consensus 642 ~~~~------~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 713 (789)
++. .+.. ...|+.|+|++|+|++ +|. |..+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++
T Consensus 425 -L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~ 500 (567)
T 1dce_A 425 -LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN 500 (567)
T ss_dssp -HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred -hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC
Confidence 110 0000 1258999999999985 565 899999999999999999 788899999999999999999995
Q ss_pred cCCccccCCCCccEEEccCCcccccC-CcccccCCCCccEEEccCCcccccCccc---ccCCCCCCeeec
Q 041249 714 IVPSSIFNISSIAEFDVGENKIQGNI-PLDYGFTLQNLQYFSIGTNRITGAIPPS---ISNASKLEVFQA 779 (789)
Q Consensus 714 ~~p~~~~~l~~L~~L~Ls~N~l~~~i-p~~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~l~~L~~L~l 779 (789)
+| .|..+++|+.|+|++|+|++.. |..+. .+++|+.|+|++|+|++.+|.. +..+++|+.|++
T Consensus 501 -lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~-~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 501 -VD-GVANLPRLQELLLCNNRLQQSAAIQPLV-SCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp -CG-GGTTCSSCCEEECCSSCCCSSSTTGGGG-GCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred -Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHh-cCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 66 8999999999999999999554 77776 8999999999999999765432 334788998875
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=5.2e-19 Score=174.03 Aligned_cols=133 Identities=23% Similarity=0.308 Sum_probs=74.4
Q ss_pred eeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCc-ccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccC
Q 041249 606 QVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPS-DFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAI 684 (789)
Q Consensus 606 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 684 (789)
+++++++|+|+ .+|..+.. +|++|++++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 34455555554 34443322 555555555555544432 355555555666665655555555555556666666666
Q ss_pred CcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCCc
Q 041249 685 NNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPL 741 (789)
Q Consensus 685 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~ 741 (789)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 666555555556666666666666666655566666666666666666666544443
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=1.9e-18 Score=170.01 Aligned_cols=127 Identities=23% Similarity=0.289 Sum_probs=115.1
Q ss_pred CEEcCCCCCCccCCcCccCCccCCeEecCCCcCCCCCCc-cccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCC
Q 041249 1 ILALDSNRLSGNIPPSIGNLKKLVEPYVSDNFLKGSIPS-SLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRN 79 (789)
Q Consensus 1 ~l~l~~n~~~~~~p~~~~~l~~l~~L~ls~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 79 (789)
.||+++|+++ .+|..+.. +|++|++++|+|++..+. .|+.+++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 3799999997 88887755 999999999999977665 4899999999999999999988999999999999999999
Q ss_pred cCCCCCcccccCCCCCCEEeccCCCCCCcCCccccCCcccccccccCCCCC
Q 041249 80 QFRGSFPTEVGNLINLETLTVSGNILQGEIPSTLGSCIKLEILEMQGNVFQ 130 (789)
Q Consensus 80 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~ 130 (789)
+|++..|..|..+++|++|+|++|+|++.+|..|..+++|++|+|++|.+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 999888888999999999999999999988999999988888877777765
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=1.1e-19 Score=214.94 Aligned_cols=192 Identities=22% Similarity=0.233 Sum_probs=115.7
Q ss_pred hhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCC
Q 041249 583 ILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNN 662 (789)
Q Consensus 583 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 662 (789)
.++++.|++. ..|..|..+++|+.|+|++|.|. .+|..+..+++|++|+|++|+|+ .+|..|..+++|++|+|++|+
T Consensus 205 ~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~ 281 (727)
T 4b8c_D 205 EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNR 281 (727)
T ss_dssp ------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSC
T ss_pred Ccccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCc
Confidence 3344445554 55777888888888888888888 67777778888888888888888 778888888888888888888
Q ss_pred CCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCC-CccEEEccCCcccccCCc
Q 041249 663 LIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNIS-SIAEFDVGENKIQGNIPL 741 (789)
Q Consensus 663 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~ip~ 741 (789)
|+ .+|..|.+|++|++|+|++|.|+ .+|..|++|++|+.|+|++|.|++.+|..+..+. .+..|+|++|.+++.+|.
T Consensus 282 l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 282 LT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 88 66888888888888888888887 6777788888888888888888888888776543 233478888888877775
Q ss_pred ccccCCCCccEEEccCC--------cccccCcccccCCCCCCeeeccCCcCcc
Q 041249 742 DYGFTLQNLQYFSIGTN--------RITGAIPPSISNASKLEVFQALNNKLTG 786 (789)
Q Consensus 742 ~~~~~l~~L~~L~L~~N--------~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 786 (789)
. |+.|++++| .|.+..+..+..+.++....++.|-+++
T Consensus 360 ~-------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 360 E-------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp C------------------------------------------------CCCG
T ss_pred c-------cceeEeecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 4 455667666 4444445555666667777778887753
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=1.3e-19 Score=207.84 Aligned_cols=196 Identities=16% Similarity=0.177 Sum_probs=161.5
Q ss_pred ccceeeEeccCcccccccccccccCccccchhcccCCc-------------ccccCcccccCccceeeec-ccCCCCccC
Q 041249 553 KAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNS-------------FTHEIPSEIGRLRRLQVPD-LNNNSIGGE 618 (789)
Q Consensus 553 ~c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-Ls~N~i~~~ 618 (789)
.|.++..+++..+.+. ..|..++++++|+.|++++|. +.+..|..+..+++|+.|+ ++.|.+...
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L 425 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDL 425 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchh
Confidence 4667778888888876 568899999999999998775 5667888889999999998 666644311
Q ss_pred CCc------cCcC--CCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCcc
Q 041249 619 IPV------NLSS--CSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGS 690 (789)
Q Consensus 619 ~p~------~~~~--l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 690 (789)
+. .+.. ...|+.|+|++|+|++ +|. |..+++|+.|+|++|+|+ .+|..|+++++|++|+|++|+|++
T Consensus 426 -~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~- 500 (567)
T 1dce_A 426 -RSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN- 500 (567)
T ss_dssp -HHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-
T ss_pred -hhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-
Confidence 10 0110 1358999999999995 676 999999999999999999 789999999999999999999995
Q ss_pred CCccccCCCCCCeeeccCccccccC-CccccCCCCccEEEccCCcccccCCcc--cccCCCCccEEEc
Q 041249 691 IPFTLSKLKNLVILYLGVNRLSGIV-PSSIFNISSIAEFDVGENKIQGNIPLD--YGFTLQNLQYFSI 755 (789)
Q Consensus 691 ~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~ip~~--~~~~l~~L~~L~L 755 (789)
+| .|+++++|+.|+|++|+|++.. |..|..+++|+.|+|++|+|++..|.. +...+++|+.|++
T Consensus 501 lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 501 VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 67 8999999999999999999776 999999999999999999999444422 2334899999975
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=8e-18 Score=180.48 Aligned_cols=182 Identities=16% Similarity=0.152 Sum_probs=149.4
Q ss_pred cCcccccC--------ccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCC--
Q 041249 594 EIPSEIGR--------LRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNL-- 663 (789)
Q Consensus 594 ~~~~~~~~--------l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l-- 663 (789)
+.+.+|.+ +++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.+..+.+.+|.++.++..+.+..+..
T Consensus 84 I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~ 162 (329)
T 3sb4_A 84 VPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYR 162 (329)
T ss_dssp ECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHH
T ss_pred cCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhh
Confidence 34556777 88999999988 88877778899999999999999988877788888888787777665221
Q ss_pred --CccCCcCC--------------------------------------------------CCCCCCCEEEccCCcCCccC
Q 041249 664 --IGSIPPPL--------------------------------------------------GNLSSLRKISLAINNLAGSI 691 (789)
Q Consensus 664 --~~~~~~~~--------------------------------------------------~~l~~L~~L~L~~N~l~~~~ 691 (789)
......+| ..+++|+.|+|++|+++.+.
T Consensus 163 ~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~ 242 (329)
T 3sb4_A 163 FKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIP 242 (329)
T ss_dssp TSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEEC
T ss_pred ccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceec
Confidence 11111111 02789999999999999778
Q ss_pred CccccCCCCCCeeeccCccccccCCccccCCCCcc-EEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccC
Q 041249 692 PFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIA-EFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISN 770 (789)
Q Consensus 692 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 770 (789)
+.+|.+|++|+.|+|.+| ++.+.+.+|.++++|+ .|++++ .++ .|+...|.++++|+.|++++|.++.+.+.+|.+
T Consensus 243 ~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~ 319 (329)
T 3sb4_A 243 DFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRYVLATGDKITTLGDELFGN 319 (329)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEEEEECSSCCCEECTTTTCT
T ss_pred HhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCEEEeCCCccCccchhhhcC
Confidence 889999999999999998 8878888999999999 999999 787 899888889999999999999999888889999
Q ss_pred CCCCCeeec
Q 041249 771 ASKLEVFQA 779 (789)
Q Consensus 771 l~~L~~L~l 779 (789)
+++|+.++.
T Consensus 320 ~~~L~~ly~ 328 (329)
T 3sb4_A 320 GVPSKLIYK 328 (329)
T ss_dssp TCCCCEEEC
T ss_pred Ccchhhhcc
Confidence 999999874
No 376
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=5.4e-19 Score=209.01 Aligned_cols=192 Identities=18% Similarity=0.164 Sum_probs=122.3
Q ss_pred cccchhcccCCcccccCcccccCccc-----eeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCC
Q 041249 579 SFLKILNLENNSFTHEIPSEIGRLRR-----LQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKI 653 (789)
Q Consensus 579 ~~L~~L~L~~N~l~~~~~~~~~~l~~-----L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 653 (789)
+.++.|+|.+|.+.. .+..+....+ +..++++.|++. ..|..|..+++|+.|+|++|+|. .+|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 557788888888885 3443322222 233344556665 66888999999999999999998 677667789999
Q ss_pred cEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCC
Q 041249 654 EVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGEN 733 (789)
Q Consensus 654 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 733 (789)
++|+|++|+|+ .+|..|.++++|++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|..+++|+.|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 99999999999 88899999999999999999999 78999999999999999999998 77888999999999999999
Q ss_pred cccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCC
Q 041249 734 KIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNN 782 (789)
Q Consensus 734 ~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 782 (789)
+|++.+|..+......+..|+|++|.+++.+|..+ +.|++++|
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l------~~l~l~~n 369 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER------RFIEINTD 369 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCcccc------ceeEeecc
Confidence 99988887765221223457899999998887654 45555555
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.72 E-value=8.3e-18 Score=161.55 Aligned_cols=131 Identities=22% Similarity=0.189 Sum_probs=53.2
Q ss_pred ceeeecccCCCCc-cCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEc
Q 041249 604 RLQVPDLNNNSIG-GEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISL 682 (789)
Q Consensus 604 ~L~~L~Ls~N~i~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 682 (789)
+|++|++++|.|+ +.+|..+..+++|++|++++|+|++. ..|..+++|++|+|++|++++.+|..+..+++|++|+|
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 3444444444443 33333344444444444444444422 33444444444444444444333333333444444444
Q ss_pred cCCcCCccC-CccccCCCCCCeeeccCccccccCC---ccccCCCCccEEEccCCccc
Q 041249 683 AINNLAGSI-PFTLSKLKNLVILYLGVNRLSGIVP---SSIFNISSIAEFDVGENKIQ 736 (789)
Q Consensus 683 ~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 736 (789)
++|+|++.. +..+..+++|+.|++++|++++..+ ..|..+++|+.|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 444444211 1334444444444444444442222 23344444444444444443
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=2.5e-17 Score=158.14 Aligned_cols=137 Identities=23% Similarity=0.251 Sum_probs=112.2
Q ss_pred CCCCcEEEcccCCCC-CCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCee
Q 041249 626 CSNLIRIGLAKNQLM-GKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVIL 704 (789)
Q Consensus 626 l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 704 (789)
.++|++|++++|+++ +.+|..|..+++|++|+|++|++++. ..|..+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 378899999999987 67787888889999999999998865 778888999999999999987688778888899999
Q ss_pred eccCccccccC-CccccCCCCccEEEccCCcccccCCc---ccccCCCCccEEEccCCcccccCcc
Q 041249 705 YLGVNRLSGIV-PSSIFNISSIAEFDVGENKIQGNIPL---DYGFTLQNLQYFSIGTNRITGAIPP 766 (789)
Q Consensus 705 ~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~ip~---~~~~~l~~L~~L~L~~N~l~~~~~~ 766 (789)
+|++|+|++.. +..+..+++|+.|++++|+++ .+|. ..+..+++|++|++++|.+. ..|.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVT-NLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG-TSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCc-chHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 99999988542 277888888999999999988 6665 44557888888888888887 3444
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.70 E-value=7.5e-17 Score=158.54 Aligned_cols=126 Identities=25% Similarity=0.350 Sum_probs=62.5
Q ss_pred hhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCC
Q 041249 583 ILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNN 662 (789)
Q Consensus 583 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 662 (789)
.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4555555555 3333322 34555555555555 444555555555555555555554444445555555555555555
Q ss_pred CCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCcccc
Q 041249 663 LIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLS 712 (789)
Q Consensus 663 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 712 (789)
|+++.|..|.++++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 55444444555555555555555555333334444444444444444443
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=1.3e-16 Score=156.94 Aligned_cols=128 Identities=23% Similarity=0.301 Sum_probs=113.9
Q ss_pred cEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCc
Q 041249 630 IRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVN 709 (789)
Q Consensus 630 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 709 (789)
+++++++|.|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 68999999998 5666543 58999999999998 67789999999999999999999888888999999999999999
Q ss_pred cccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccc
Q 041249 710 RLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITG 762 (789)
Q Consensus 710 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~ 762 (789)
+|++..|..|..+++|+.|+|++|+|+ .+|...+..+++|+.|+|++|++..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeec
Confidence 999888889999999999999999998 8888777689999999999999864
No 381
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=2e-16 Score=153.35 Aligned_cols=134 Identities=24% Similarity=0.280 Sum_probs=115.9
Q ss_pred CCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeecc
Q 041249 628 NLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLG 707 (789)
Q Consensus 628 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 707 (789)
..+.+++++|+++ .+|..+ .++|+.|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 8 ~~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 8 SGTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp ETTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 3578999999998 455443 3689999999999998877888999999999999999997777778999999999999
Q ss_pred CccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCc
Q 041249 708 VNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIP 765 (789)
Q Consensus 708 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~ 765 (789)
+|+|++..+..|..+++|+.|+|++|+|+ .+|..++..+++|++|+|++|++++..|
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999777778899999999999999998 7888877679999999999999986544
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=2.2e-16 Score=153.00 Aligned_cols=129 Identities=21% Similarity=0.226 Sum_probs=65.5
Q ss_pred eeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCC
Q 041249 606 QVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAIN 685 (789)
Q Consensus 606 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 685 (789)
+.+++++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34444444444 2332221 34555555555555444444455555555555555555444444555555555555555
Q ss_pred cCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccc
Q 041249 686 NLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQG 737 (789)
Q Consensus 686 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 737 (789)
+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 5554444445555555555555555554444444555555555555555553
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=3.5e-17 Score=153.78 Aligned_cols=107 Identities=20% Similarity=0.178 Sum_probs=44.3
Q ss_pred ceeeecccCCCCc-cCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEc
Q 041249 604 RLQVPDLNNNSIG-GEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISL 682 (789)
Q Consensus 604 ~L~~L~Ls~N~i~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 682 (789)
+|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..|..+++|++|+|++|++++.+|..+..+++|++|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 4444444444444 33444444444444444444444432 33444444444444444444333333333444444444
Q ss_pred cCCcCCcc-CCccccCCCCCCeeeccCcccc
Q 041249 683 AINNLAGS-IPFTLSKLKNLVILYLGVNRLS 712 (789)
Q Consensus 683 ~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~ 712 (789)
++|++++. .+..+..+++|++|++++|+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 44444321 1133334444444444444443
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=7.7e-17 Score=151.42 Aligned_cols=108 Identities=20% Similarity=0.282 Sum_probs=54.2
Q ss_pred CCCcEEEcccCCCC-CCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeee
Q 041249 627 SNLIRIGLAKNQLM-GKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILY 705 (789)
Q Consensus 627 ~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 705 (789)
++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..|..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555554 34444555555555555555555533 4445555555555555555543444444455555555
Q ss_pred ccCcccccc-CCccccCCCCccEEEccCCccc
Q 041249 706 LGVNRLSGI-VPSSIFNISSIAEFDVGENKIQ 736 (789)
Q Consensus 706 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~ 736 (789)
+++|++++. .+..+..+++|++|++++|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 555555432 1244444444555555555444
No 385
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.67 E-value=4.5e-17 Score=168.02 Aligned_cols=141 Identities=21% Similarity=0.164 Sum_probs=107.8
Q ss_pred CCCCCCcccccCCccEEEEEEcCCceE--EEEEEeccccch------------------------hhHHHHHHHHHHhcC
Q 041249 271 GFSSANLIGTGSFGSVYKGVLDEGRTT--VTVKVFNLHHHR------------------------ASRSFIAECRALRSI 324 (789)
Q Consensus 271 ~f~~~~~ig~G~~g~Vy~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l 324 (789)
-|...+.||+|+||.||+|.+..+|+. ||||+++..... ....+.+|++.+.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999999657888 999997543111 113688999999999
Q ss_pred CCCcc--ceeeeeeccCCCCCCceEEEEeeccCC-C----ChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 041249 325 RHRNL--VKVFTACSGVDYQGNDFKALVYEFMQN-G----SLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDY 397 (789)
Q Consensus 325 ~h~ni--v~l~~~~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~ 397 (789)
.|+++ ..+++. . ..++||||+.. | +|.++... .++.....++.|++.||.|
T Consensus 128 ~~~~i~~p~~~~~----~-----~~~lVmE~~g~~g~~~~~L~~~~~~-------------~~~~~~~~i~~qi~~~l~~ 185 (258)
T 1zth_A 128 KEAGVSVPQPYTY----M-----KNVLLMEFIGEDELPAPTLVELGRE-------------LKELDVEGIFNDVVENVKR 185 (258)
T ss_dssp HHTTCCCCCEEEE----E-----TTEEEEECCEETTEECCBHHHHGGG-------------GGGSCHHHHHHHHHHHHHH
T ss_pred HhCCCCCCeEEEc----C-----CCEEEEEecCCCCCccccHHHHhhc-------------cChHHHHHHHHHHHHHHHH
Confidence 88764 333332 1 45899999952 4 56655421 1244577899999999999
Q ss_pred hh-cCCCCCceecCCCCCceecCCCCceeeCcccccccCCCC
Q 041249 398 LH-HDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPT 438 (789)
Q Consensus 398 LH-~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 438 (789)
|| ..+ ||||||||+|||+++ .++|+|||+|....++
T Consensus 186 lH~~~g---ivHrDlkp~NILl~~--~~~liDFG~a~~~~~~ 222 (258)
T 1zth_A 186 LYQEAE---LVHADLSEYNIMYID--KVYFIDMGQAVTLRHP 222 (258)
T ss_dssp HHHTSC---EECSSCSTTSEEESS--SEEECCCTTCEETTST
T ss_pred HHHHCC---EEeCCCCHHHEEEcC--cEEEEECcccccCCCc
Confidence 99 888 999999999999998 9999999999876443
No 386
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.64 E-value=3.1e-16 Score=151.83 Aligned_cols=132 Identities=12% Similarity=0.116 Sum_probs=68.0
Q ss_pred cCCCCCcEEEcccCCCCCCCCcccCCCC-CCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCC
Q 041249 624 SSCSNLIRIGLAKNQLMGKIPSDFGSLS-KIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLV 702 (789)
Q Consensus 624 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 702 (789)
.++++|++|++++|+++. +|. +..+. +|++|+|++|+|++. ..|..+++|++|+|++|+|++..+..|..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 344455555555555542 232 22222 555555555555533 3455555555555555555543333345555555
Q ss_pred eeeccCccccccCCc--cccCCCCccEEEccCCcccccCCcc---cccCCCCccEEEccCCccc
Q 041249 703 ILYLGVNRLSGIVPS--SIFNISSIAEFDVGENKIQGNIPLD---YGFTLQNLQYFSIGTNRIT 761 (789)
Q Consensus 703 ~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~ip~~---~~~~l~~L~~L~L~~N~l~ 761 (789)
+|+|++|+|+ .+|. .+..+++|+.|++++|+++ .+|.. ++..+++|+.|++++|.+.
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 5555555554 3333 5555566666666666665 55543 2225566666666666554
No 387
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=7.8e-16 Score=164.92 Aligned_cols=198 Identities=14% Similarity=0.061 Sum_probs=167.7
Q ss_pred cceeeEeccCccccc--------------------ccccccccC--------ccccchhcccCCcccccCcccccCccce
Q 041249 554 AQKVTILDLESLKLA--------------------GSILPHIGN--------LSFLKILNLENNSFTHEIPSEIGRLRRL 605 (789)
Q Consensus 554 c~~l~~l~l~s~~~~--------------------~~~l~~l~~--------l~~L~~L~L~~N~l~~~~~~~~~~l~~L 605 (789)
+.+++.+++..+.+. ......|.+ +++|++|+|.+ +++.+.+.+|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 567778888877776 223356777 99999999999 8998888899999999
Q ss_pred eeecccCCCCccCCCccCcCCCCCcEEEcccCCC----CCCCCccc----------------------------------
Q 041249 606 QVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQL----MGKIPSDF---------------------------------- 647 (789)
Q Consensus 606 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l----~~~~~~~~---------------------------------- 647 (789)
+.|++++|.++.+.+.+|.++.++..+.+..+.. ......+|
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 9999999999888889999988888888776321 11111112
Q ss_pred ----------------CCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCC-eeeccCcc
Q 041249 648 ----------------GSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLV-ILYLGVNR 710 (789)
Q Consensus 648 ----------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~ 710 (789)
..+++|+.|+|++|+++.+.+.+|.++++|+.|+|.+| ++.+.+.+|.+|++|+ .+++.+ .
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~ 284 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-S 284 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-T
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-c
Confidence 02789999999999999999999999999999999998 8878888999999999 999999 8
Q ss_pred ccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEc
Q 041249 711 LSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSI 755 (789)
Q Consensus 711 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L 755 (789)
++.+.+.+|.++++|+.|++++|.++ .|+...|.++++|+.++.
T Consensus 285 l~~I~~~aF~~c~~L~~l~l~~n~i~-~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 285 VTAIEFGAFMGCDNLRYVLATGDKIT-TLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEECTTTTTTCTTEEEEEECSSCCC-EECTTTTCTTCCCCEEEC
T ss_pred ceEEchhhhhCCccCCEEEeCCCccC-ccchhhhcCCcchhhhcc
Confidence 88788899999999999999999999 999999989999999874
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.63 E-value=1.7e-16 Score=153.61 Aligned_cols=132 Identities=20% Similarity=0.210 Sum_probs=100.9
Q ss_pred ccCccceeeecccCCCCccCCCccCcCC-CCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCC
Q 041249 599 IGRLRRLQVPDLNNNSIGGEIPVNLSSC-SNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSL 677 (789)
Q Consensus 599 ~~~l~~L~~L~Ls~N~i~~~~p~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 677 (789)
+..+.+|+.|++++|+|+. +|. +..+ ++|++|++++|+|++. ..|..+++|++|+|++|+|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 5667778888888888873 444 4444 4888888888888754 567788888888888888886655556788888
Q ss_pred CEEEccCCcCCccCCc--cccCCCCCCeeeccCccccccCCc----cccCCCCccEEEccCCccc
Q 041249 678 RKISLAINNLAGSIPF--TLSKLKNLVILYLGVNRLSGIVPS----SIFNISSIAEFDVGENKIQ 736 (789)
Q Consensus 678 ~~L~L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~ 736 (789)
++|+|++|+|+ .+|. .+..+++|+.|++++|.++ ..|. .+..+++|+.||+++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 88888888886 5555 7888888888888888888 4555 3888888888888888876
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.62 E-value=4.2e-15 Score=163.02 Aligned_cols=217 Identities=12% Similarity=0.037 Sum_probs=110.6
Q ss_pred eeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcc
Q 041249 556 KVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLA 635 (789)
Q Consensus 556 ~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~ 635 (789)
.++.+.+|. .+.......|.++++|+.++|.+|+++.+...+|. ..+|+.+.|.++ ++.+...+|.++++|+.+++.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 344444443 23333334455555555555555555544444444 345555555432 443444555555555555555
Q ss_pred cCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCC-----ccCCccccCCCCCCeeeccCcc
Q 041249 636 KNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLA-----GSIPFTLSKLKNLVILYLGVNR 710 (789)
Q Consensus 636 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~ 710 (789)
+| ++.+...+|.+ .+|+.+.+ .|.++.+.+.+|.++++|+.+++.+|.+. .+.+.+|.+|++|+.++|. |.
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~ 310 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ES 310 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TT
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-Cc
Confidence 43 33344444554 45555555 34455455555555555555555555543 2444555555555555555 33
Q ss_pred ccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCC-CCCeeeccCC
Q 041249 711 LSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNAS-KLEVFQALNN 782 (789)
Q Consensus 711 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N 782 (789)
++.+...+|.++++|+.++|..| ++ .|+...|.++ +|+.|++++|.+....+..|.+++ ++..|++..+
T Consensus 311 i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~ 380 (401)
T 4fdw_A 311 IRILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAE 380 (401)
T ss_dssp CCEECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGG
T ss_pred eEEEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHH
Confidence 55444555555555666655433 44 5555555455 566666655555544455555553 4555555544
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.62 E-value=3.3e-15 Score=163.84 Aligned_cols=219 Identities=11% Similarity=0.048 Sum_probs=187.9
Q ss_pred eeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEEEcc
Q 041249 556 KVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLA 635 (789)
Q Consensus 556 ~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~ 635 (789)
+++.+.++.+ +.......|.++ +|+.++|.. .++.+.+.+|.++++|+.++|++|+++.+...+|. +.+|+.+.+.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 5677777766 444555677774 699999986 78878888999999999999999999977667777 6999999999
Q ss_pred cCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCcccc---
Q 041249 636 KNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLS--- 712 (789)
Q Consensus 636 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--- 712 (789)
.| ++.+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.| .|.++.+.+.+|.+|++|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 55 77677889999999999999875 78788899988 78999999 56677678889999999999999998875
Q ss_pred --ccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCcc
Q 041249 713 --GIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLTG 786 (789)
Q Consensus 713 --~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 786 (789)
.+.+.+|.++++|+.++|. |.++ .|+...|.++.+|+.++|..| ++.+.+.+|.++ +|+.+++++|.+..
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIP-ESIR-ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCC-TTCC-EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred ccEECHHHhhCCccCCeEEeC-CceE-EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 5778899999999999999 5588 999999989999999999665 777888999999 99999999987654
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=8.4e-18 Score=166.24 Aligned_cols=133 Identities=19% Similarity=0.301 Sum_probs=73.6
Q ss_pred cCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCC
Q 041249 622 NLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNL 701 (789)
Q Consensus 622 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 701 (789)
.|..+++|++|++++|+|++ +| .+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 45555555555555555553 34 4555555555555555555 344444445556666666666653 33 45556666
Q ss_pred CeeeccCccccccCC-ccccCCCCccEEEccCCcccccCCcc---------cccCCCCccEEEccCCccc
Q 041249 702 VILYLGVNRLSGIVP-SSIFNISSIAEFDVGENKIQGNIPLD---------YGFTLQNLQYFSIGTNRIT 761 (789)
Q Consensus 702 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ip~~---------~~~~l~~L~~L~L~~N~l~ 761 (789)
++|++++|+|++..+ ..+..+++|++|++++|++++.+|.. ++..+++|+.|| +|.++
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 666666666663222 35666666666666666666444432 223566666665 55555
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=5.5e-18 Score=167.60 Aligned_cols=156 Identities=20% Similarity=0.226 Sum_probs=136.1
Q ss_pred cccCccccchhcccCCcccccCcc------cccCccceeeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCccc
Q 041249 574 HIGNLSFLKILNLENNSFTHEIPS------EIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDF 647 (789)
Q Consensus 574 ~l~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 647 (789)
.+.....++.++++.+.+++..|. .|..+++|++|+|++|+|++ +| .+.++++|++|++++|+|+ .+|..+
T Consensus 13 ~~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchh
Confidence 356677889999999999988877 89999999999999999996 66 8999999999999999999 678778
Q ss_pred CCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCC-ccccCCCCCCeeeccCccccccCCcc--------
Q 041249 648 GSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIP-FTLSKLKNLVILYLGVNRLSGIVPSS-------- 718 (789)
Q Consensus 648 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~-------- 718 (789)
..+++|++|+|++|++++. | .+..+++|++|+|++|+|+...+ ..+..+++|++|++++|++++..|..
T Consensus 90 ~~~~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 167 (198)
T 1ds9_A 90 AVADTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRI 167 (198)
T ss_dssp HHHHHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHH
T ss_pred hcCCcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHH
Confidence 8889999999999999964 4 68889999999999999985333 47899999999999999998776653
Q ss_pred --ccCCCCccEEEccCCccc
Q 041249 719 --IFNISSIAEFDVGENKIQ 736 (789)
Q Consensus 719 --~~~l~~L~~L~Ls~N~l~ 736 (789)
+..+++|+.|| +|.++
T Consensus 168 ~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 168 EVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHCSSCSEEC--CGGGT
T ss_pred HHHHhCCCcEEEC--CcccC
Confidence 88999999997 78876
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=3.1e-14 Score=136.73 Aligned_cols=104 Identities=21% Similarity=0.239 Sum_probs=58.4
Q ss_pred CCeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEeccC
Q 041249 23 LVEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSG 102 (789)
Q Consensus 23 l~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 102 (789)
.+.|++++|.|+ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 345566666665 3554442 5566666666666655555566666666666666666544444455666666666666
Q ss_pred CCCCCcCCccccCCcccccccccCCCC
Q 041249 103 NILQGEIPSTLGSCIKLEILEMQGNVF 129 (789)
Q Consensus 103 N~l~~~~p~~~~~l~~L~~l~l~~N~~ 129 (789)
|+|++..|..|..+++|++|+|++|++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~ 114 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPW 114 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCC
Confidence 666644444555555555555555443
No 394
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.53 E-value=4e-14 Score=136.49 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=59.1
Q ss_pred CeEecCCCcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEeccCC
Q 041249 24 VEPYVSDNFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGN 103 (789)
Q Consensus 24 ~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 103 (789)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666664 5555443 56666666666666555556666666666666666666333333556666666666666
Q ss_pred CCCCcCCccccCCcccccccccCCCC
Q 041249 104 ILQGEIPSTLGSCIKLEILEMQGNVF 129 (789)
Q Consensus 104 ~l~~~~p~~~~~l~~L~~l~l~~N~~ 129 (789)
+|++..+..|..+++|++|+|++|.+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~ 117 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPW 117 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCc
Confidence 66644444455555555555555544
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=4.4e-14 Score=135.69 Aligned_cols=104 Identities=23% Similarity=0.270 Sum_probs=58.5
Q ss_pred eeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCC
Q 041249 606 QVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAIN 685 (789)
Q Consensus 606 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 685 (789)
+.+++++|.|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 45566666665 3444332 55566666666665555555555556666666666665555555555555555555555
Q ss_pred cCCccCCccccCCCCCCeeeccCcccc
Q 041249 686 NLAGSIPFTLSKLKNLVILYLGVNRLS 712 (789)
Q Consensus 686 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 712 (789)
+|++..+..|..+++|++|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 555444444555555555555555554
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=6.5e-14 Score=134.95 Aligned_cols=104 Identities=22% Similarity=0.298 Sum_probs=58.5
Q ss_pred eeecccCCCCccCCCccCcCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCC
Q 041249 606 QVPDLNNNSIGGEIPVNLSSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAIN 685 (789)
Q Consensus 606 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 685 (789)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45566666665 4444443 55666666666666555555555666666666666665544444555555555555555
Q ss_pred cCCccCCccccCCCCCCeeeccCcccc
Q 041249 686 NLAGSIPFTLSKLKNLVILYLGVNRLS 712 (789)
Q Consensus 686 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 712 (789)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555444444555555555555555555
No 397
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.48 E-value=2.2e-14 Score=153.74 Aligned_cols=145 Identities=14% Similarity=0.163 Sum_probs=100.7
Q ss_pred HHhhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccch--------------hhHHH--------HHHHHHHhc
Q 041249 266 HNATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHR--------------ASRSF--------IAECRALRS 323 (789)
Q Consensus 266 ~~~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------------~~~~~--------~~e~~~l~~ 323 (789)
.....-|.+...||.|++|.||+|... +|+.||||+++..... ..... .+|.+.+.+
T Consensus 91 ~~rg~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r 169 (397)
T 4gyi_A 91 AARKDVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA 169 (397)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence 333345888999999999999999986 7999999997643110 01112 234445555
Q ss_pred CCCCccc--eeeeeeccCCCCCCceEEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC
Q 041249 324 IRHRNLV--KVFTACSGVDYQGNDFKALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD 401 (789)
Q Consensus 324 l~h~niv--~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~ 401 (789)
+.+.++. ..++. ...++||||+.++++..+.... ....++.|++.+|.|||..
T Consensus 170 L~~~gv~vp~p~~~---------~~~~LVME~i~G~~L~~l~~~~----------------~~~~l~~qll~~l~~lH~~ 224 (397)
T 4gyi_A 170 LYEEGFPVPEPIAQ---------SRHTIVMSLVDALPMRQVSSVP----------------DPASLYADLIALILRLAKH 224 (397)
T ss_dssp HHHTTCSCCCEEEE---------ETTEEEEECCSCEEGGGCCCCS----------------CHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCCCCeeeec---------cCceEEEEecCCccHhhhcccH----------------HHHHHHHHHHHHHHHHHHC
Confidence 5333221 11111 1237999999988887654211 2356789999999999999
Q ss_pred CCCCceecCCCCCceecCCCC----------ceeeCcccccccCCCCC
Q 041249 402 CQPITTHCDLKPSNILLDEEM----------VSHVGDFGLARFLPPTH 439 (789)
Q Consensus 402 ~~~~ivH~dlk~~Nill~~~~----------~~kl~Dfgla~~~~~~~ 439 (789)
| ||||||||.|||+++++ .+.|+||+-+-...++.
T Consensus 225 g---IVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp~ 269 (397)
T 4gyi_A 225 G---LIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDHPN 269 (397)
T ss_dssp T---EECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETTSTT
T ss_pred C---CcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCCCCC
Confidence 8 99999999999998776 37899999776655443
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.38 E-value=3.4e-15 Score=162.14 Aligned_cols=159 Identities=19% Similarity=0.169 Sum_probs=93.8
Q ss_pred ccccchhcccCCcccccCcccccCc-----cceeeecccCCCCccCCCccC-cCCCCCcEEEcccCCCCCCCCccc----
Q 041249 578 LSFLKILNLENNSFTHEIPSEIGRL-----RRLQVPDLNNNSIGGEIPVNL-SSCSNLIRIGLAKNQLMGKIPSDF---- 647 (789)
Q Consensus 578 l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~i~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~~~~---- 647 (789)
++.|+.|+|++|.|+......|..+ ++|++|+|++|.|+......+ ..+++|++|+|++|.|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4567888888888876544444333 578888888888764333333 234567777777777764322222
Q ss_pred -CCCCCCcEEEccCCCCCcc----CCcCCCCCCCCCEEEccCCcCCccC----CccccCCCCCCeeeccCcccccc----
Q 041249 648 -GSLSKIEVLSLGFNNLIGS----IPPPLGNLSSLRKISLAINNLAGSI----PFTLSKLKNLVILYLGVNRLSGI---- 714 (789)
Q Consensus 648 -~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~---- 714 (789)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|+|+... +..+..+++|+.|+|++|.|++.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 2345677777777776532 2223345566667777766665321 34445555666666666666532
Q ss_pred CCccccCCCCccEEEccCCccc
Q 041249 715 VPSSIFNISSIAEFDVGENKIQ 736 (789)
Q Consensus 715 ~p~~~~~l~~L~~L~Ls~N~l~ 736 (789)
++..+...++|++|||++|.|+
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHHhCCCCCEEeccCCCCC
Confidence 2233344556666666666665
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.37 E-value=4.6e-15 Score=161.10 Aligned_cols=183 Identities=14% Similarity=0.092 Sum_probs=107.2
Q ss_pred ccceeeecccCCCCccCCCccCc-----CCCCCcEEEcccCCCCCCCCcc-cCCCCCCcEEEccCCCCCccCCcCC----
Q 041249 602 LRRLQVPDLNNNSIGGEIPVNLS-----SCSNLIRIGLAKNQLMGKIPSD-FGSLSKIEVLSLGFNNLIGSIPPPL---- 671 (789)
Q Consensus 602 l~~L~~L~Ls~N~i~~~~p~~~~-----~l~~L~~L~l~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~---- 671 (789)
++.|+.|+|++|.|+......+. ..++|++|+|++|.|+...... ...+++|+.|+|++|+|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 34677777777777643333332 2257777888877776322222 2234567777888777764433333
Q ss_pred -CCCCCCCEEEccCCcCCcc----CCccccCCCCCCeeeccCcccccc----CCccccCCCCccEEEccCCccccc----
Q 041249 672 -GNLSSLRKISLAINNLAGS----IPFTLSKLKNLVILYLGVNRLSGI----VPSSIFNISSIAEFDVGENKIQGN---- 738 (789)
Q Consensus 672 -~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~---- 738 (789)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++. ++..+...++|+.|+|++|.|++.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 2456777788887777642 333446677777888888777642 245566667777888888777632
Q ss_pred CCcccccCCCCccEEEccCCcccccCcccccCCCC-----CCeee--ccCCcCc
Q 041249 739 IPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASK-----LEVFQ--ALNNKLT 785 (789)
Q Consensus 739 ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-----L~~L~--l~~N~l~ 785 (789)
++..+. ..++|++|+|++|.|++.....+..+.. |+.+. +..|.++
T Consensus 231 l~~~L~-~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 231 LARAAR-EHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHHHH-HCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHHHHH-hCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 222222 3567777888887777654444443321 44555 5555443
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.37 E-value=1.2e-12 Score=141.18 Aligned_cols=102 Identities=23% Similarity=0.243 Sum_probs=50.7
Q ss_pred EEcCCC-CCCccCCcCccCCccCCeEecCC-CcCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCC
Q 041249 2 LALDSN-RLSGNIPPSIGNLKKLVEPYVSD-NFLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRN 79 (789)
Q Consensus 2 l~l~~n-~~~~~~p~~~~~l~~l~~L~ls~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 79 (789)
+|++++ +|+ .+|. |..+++|++|+|++ |+|++..|+.|+.+++|++|+|++|+|++..|..|..|++|++|||++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 345554 555 3444 55555555555553 5555444445555555555555555555544445555555555555555
Q ss_pred cCCCCCcccccCCCCCCEEeccCCCCC
Q 041249 80 QFRGSFPTEVGNLINLETLTVSGNILQ 106 (789)
Q Consensus 80 ~l~~~~p~~~~~l~~L~~L~l~~N~l~ 106 (789)
+|++..|..|..+. |+.|+|++|.|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 55532222233332 555555555554
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=7.1e-13 Score=142.95 Aligned_cols=104 Identities=19% Similarity=0.172 Sum_probs=79.9
Q ss_pred eecccCC-CCccCCCccCcCCCCCcEEEccc-CCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccC
Q 041249 607 VPDLNNN-SIGGEIPVNLSSCSNLIRIGLAK-NQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAI 684 (789)
Q Consensus 607 ~L~Ls~N-~i~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 684 (789)
.++++++ +|+ .+|. |..+++|++|+|++ |+|++..+..|.++++|+.|+|++|+|+++.|..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577777 777 4666 88888888888885 888876667788888888888888888877777788888888888888
Q ss_pred CcCCccCCccccCCCCCCeeeccCccccc
Q 041249 685 NNLAGSIPFTLSKLKNLVILYLGVNRLSG 713 (789)
Q Consensus 685 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 713 (789)
|+|++..+..|..++ |+.|+|++|.+..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 888866666666665 8888888887763
No 402
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.33 E-value=3.5e-11 Score=131.99 Aligned_cols=115 Identities=11% Similarity=0.042 Sum_probs=75.3
Q ss_pred cCCCCCCccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCcccccCCCCCCEEeccCCCCCCcCCc
Q 041249 32 FLKGSIPSSLGLCESLTTIGLFNNNLSGTIPPQLMGLTSLVALDLSRNQFRGSFPTEVGNLINLETLTVSGNILQGEIPS 111 (789)
Q Consensus 32 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 111 (789)
.++.+-..+|.+|++|+.+.|.++ ++..-..+|.+|++|+.+++.++ ++..-..+|..+.+|+.+.+..+ +...-..
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 355444567889999999999754 76444567889999999999766 55233557888889988887755 4324455
Q ss_pred cccCCcccccccccCCCCCccceeecCCcccCCCchhhhcCcccccEEecccC
Q 041249 112 TLGSCIKLEILEMQGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENLNLSYN 164 (789)
Q Consensus 112 ~~~~l~~L~~l~l~~N~~~~l~~l~ls~N~l~~~~p~~~~~~~~l~~l~ls~N 164 (789)
+|.++..+....... ....-..+|.++++|+.+.+.++
T Consensus 135 aF~~~~~~~~~~~~~---------------~~~i~~~aF~~c~~L~~i~l~~~ 172 (394)
T 4fs7_A 135 AFKGCDFKEITIPEG---------------VTVIGDEAFATCESLEYVSLPDS 172 (394)
T ss_dssp TTTTCCCSEEECCTT---------------CCEECTTTTTTCTTCCEEECCTT
T ss_pred eeecccccccccCcc---------------ccccchhhhcccCCCcEEecCCc
Confidence 666654333222111 11122356888888998887654
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.13 E-value=7.3e-10 Score=121.44 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=82.5
Q ss_pred CcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCcccccCCcccccCC
Q 041249 668 PPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTL 747 (789)
Q Consensus 668 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l 747 (789)
..+|.++..|+.+.+.++..+ +...+|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++ .|+...|.++
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C 333 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGC 333 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTC
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCC
Confidence 345666777777777655544 556677777788888775 4566566778888888888888765 66 7888888788
Q ss_pred CCccEEEccCCcccccCcccccCCCCCCeeeccCCc
Q 041249 748 QNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNK 783 (789)
Q Consensus 748 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 783 (789)
.+|+.+.|..+ ++.+...+|.++++|+.+++.+|.
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 88888888654 666667888888888888888764
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.12 E-value=6.5e-10 Score=121.84 Aligned_cols=217 Identities=13% Similarity=-0.011 Sum_probs=160.7
Q ss_pred ccceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCCCccCCCccCcCCCCCcEE
Q 041249 553 KAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNSIGGEIPVNLSSCSNLIRI 632 (789)
Q Consensus 553 ~c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L 632 (789)
.|.+++.+.+|.... ......|.++++|+.+++..| ++.+...+|.++..|+.+.+..+... +...+....+|+.+
T Consensus 160 ~c~~L~~i~l~~~~~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i 235 (394)
T 4fs7_A 160 TCESLEYVSLPDSME-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNI 235 (394)
T ss_dssp TCTTCCEEECCTTCC-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEE
T ss_pred ccCCCcEEecCCccc-eeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceE
Confidence 577888888886543 344567889999999999877 66567778999999999998877655 23344455788888
Q ss_pred EcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCcccc
Q 041249 633 GLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLS 712 (789)
Q Consensus 633 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 712 (789)
.+..+. ..+...+|.++.+|+.+.+..+... +...+|..+..++.+.+..+.+ ....|..+.+|+.+.+..+ ++
T Consensus 236 ~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~ 309 (394)
T 4fs7_A 236 IIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VK 309 (394)
T ss_dssp EECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CC
T ss_pred EECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cc
Confidence 886543 3355667888888888888776544 7777788888888887776543 3456778888888888655 66
Q ss_pred ccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCC
Q 041249 713 GIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNN 782 (789)
Q Consensus 713 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 782 (789)
.+...+|.++++|+.++|..+ ++ .|+...|.++.+|+.+++..| ++.+...+|.++++|+.+++.++
T Consensus 310 ~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 310 FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 566677888888888888654 66 787777777888888888766 66667778888888888887654
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.99 E-value=4.1e-09 Score=115.49 Aligned_cols=134 Identities=11% Similarity=0.114 Sum_probs=104.6
Q ss_pred CcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCC
Q 041249 644 PSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNIS 723 (789)
Q Consensus 644 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 723 (789)
..+|.++.+|+.+.+.++.. .+...+|.++++|+.+.+. +.++.+...+|.++++|+.+++..+ ++.+...+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 34678889999999976654 4888999999999999996 5676677889999999999999865 7767788999999
Q ss_pred CccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCCcCc
Q 041249 724 SIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNNKLT 785 (789)
Q Consensus 724 ~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 785 (789)
+|+.+.|..+ ++ .|+...|.++.+|+.+++.+|.... ..+....+|+.+.+..|.+.
T Consensus 335 ~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 335 QLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred CCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 9999999765 77 8999999899999999999987652 56777889999999877653
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.99 E-value=9e-11 Score=126.22 Aligned_cols=84 Identities=8% Similarity=0.190 Sum_probs=43.9
Q ss_pred CCCCCCeeeccCccccccCCcccc---CCCCccEEEccCCccccc----CCcccccCCCCccEEEccCCcccccCccccc
Q 041249 697 KLKNLVILYLGVNRLSGIVPSSIF---NISSIAEFDVGENKIQGN----IPLDYGFTLQNLQYFSIGTNRITGAIPPSIS 769 (789)
Q Consensus 697 ~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 769 (789)
.+++|++|+|++|.+.+..+..+. .+++|++|+|+.|.|.+. ++..+. .+++|+.|+|++|.|+...-..+.
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~-~l~~L~~L~L~~n~i~d~~~~~l~ 328 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVD-KIKHLKFINMKYNYLSDEMKKELQ 328 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHH-HHTTCSEEECCSBBCCHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcc-cCCcceEEECCCCcCCHHHHHHHH
Confidence 355666666666666543333332 355666666666666532 222221 356666666666666643333333
Q ss_pred C-CCCCCeeeccCCc
Q 041249 770 N-ASKLEVFQALNNK 783 (789)
Q Consensus 770 ~-l~~L~~L~l~~N~ 783 (789)
. + ...+++++|+
T Consensus 329 ~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 329 KSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHC--CSEEECCSBC
T ss_pred HHc--CCEEEecCCc
Confidence 3 2 2446666554
No 407
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.92 E-value=2e-09 Score=110.73 Aligned_cols=145 Identities=17% Similarity=0.068 Sum_probs=110.7
Q ss_pred hhcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCC-CCccceeeeeeccCCCCCCce
Q 041249 268 ATDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR-HRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 268 ~~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 346 (789)
.-++|......+.|+.+.||++... ++.+++|+...........+..|+++++.+. |..+.++++++.... .
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~-----~ 84 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG-----W 84 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT-----E
T ss_pred HhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC-----c
Confidence 3457877788888889999999754 6899999986532233446889999999884 677788888876544 7
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC-------------------------
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD------------------------- 401 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~------------------------- 401 (789)
.++||||+++.++.+.... ......++.+++++++.||..
T Consensus 85 ~~lv~e~i~G~~l~~~~~~---------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (263)
T 3tm0_A 85 SNLLMSEADGVLCSEEYED---------------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNND 149 (263)
T ss_dssp EEEEEECCSSEEHHHHCCT---------------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTT
T ss_pred eEEEEEecCCeehhhccCC---------------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcc
Confidence 8999999999888876421 112347889999999999981
Q ss_pred -------------------------------CCCCceecCCCCCceecCCCCceeeCccccccc
Q 041249 402 -------------------------------CQPITTHCDLKPSNILLDEEMVSHVGDFGLARF 434 (789)
Q Consensus 402 -------------------------------~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 434 (789)
..+.++|||+++.||+++++..+.|+||+.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 150 LADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 114489999999999998766668999987653
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.91 E-value=3.7e-10 Score=121.42 Aligned_cols=137 Identities=15% Similarity=0.111 Sum_probs=87.8
Q ss_pred ccCCCCCCcEEEccCCC-CCccCCcCCCCCCCCCEEEccCCcCCccCCcccc--CCCCCCeeeccC--cccccc-----C
Q 041249 646 DFGSLSKIEVLSLGFNN-LIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLS--KLKNLVILYLGV--NRLSGI-----V 715 (789)
Q Consensus 646 ~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~--N~l~~~-----~ 715 (789)
.+..+++|+.|+|++|. +. .+. +. +++|++|+|..|.++......+. .+++|+.|+|+. |...+. +
T Consensus 167 ll~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l 242 (362)
T 2ra8_A 167 VLDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242 (362)
T ss_dssp HHHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGT
T ss_pred HHhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHH
Confidence 34455666677666652 21 222 32 66777777777766543333333 567777777753 221111 1
Q ss_pred Cccc--cCCCCccEEEccCCcccccCCccccc--CCCCccEEEccCCcccccC----cccccCCCCCCeeeccCCcCcc
Q 041249 716 PSSI--FNISSIAEFDVGENKIQGNIPLDYGF--TLQNLQYFSIGTNRITGAI----PPSISNASKLEVFQALNNKLTG 786 (789)
Q Consensus 716 p~~~--~~l~~L~~L~Ls~N~l~~~ip~~~~~--~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~ 786 (789)
...+ ..+++|+.|+|++|.+.+..+..++. .+++|++|+|+.|.|++.. +..+..+++|+.|++++|.++.
T Consensus 243 ~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 1122 25789999999999998544444431 4789999999999998753 3334567999999999999875
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.82 E-value=3.6e-09 Score=108.54 Aligned_cols=139 Identities=19% Similarity=0.090 Sum_probs=97.8
Q ss_pred hcCCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCc--cceeeeeeccCCCCCCce
Q 041249 269 TDGFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRN--LVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 269 ~~~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~~~~ 346 (789)
..++....+.+.|..+.||++... ++..+++|+.... ....+..|+++++.+.+.+ +.+++++..... .
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~-----~ 89 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG-----R 89 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS-----C
T ss_pred cCCCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC-----C
Confidence 344544333345666999999764 5678999997543 2345788999999885445 445777765433 5
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCC------------------------
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDC------------------------ 402 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------ 402 (789)
.++||||+++.++. .... ....++.+++..++.||...
T Consensus 90 ~~~v~e~i~G~~l~--~~~~----------------~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T 1nd4_A 90 DWLLLGEVPGQDLL--SSHL----------------APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAG 151 (264)
T ss_dssp EEEEEECCSSEETT--TSCC----------------CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTT
T ss_pred CEEEEEecCCcccC--cCcC----------------CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcC
Confidence 79999999987773 2110 12357778888888888643
Q ss_pred -------------------------------CCCceecCCCCCceecCCCCceeeCccccccc
Q 041249 403 -------------------------------QPITTHCDLKPSNILLDEEMVSHVGDFGLARF 434 (789)
Q Consensus 403 -------------------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 434 (789)
...++|||++|.||+++++..+.++||+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 152 LVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876678999998754
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.77 E-value=1e-07 Score=103.73 Aligned_cols=221 Identities=10% Similarity=0.017 Sum_probs=138.9
Q ss_pred ccceeeEeccCcccccccccccccCccccchhcccCCcccccCcccccCccceeeecccCCC------------------
Q 041249 553 KAQKVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTHEIPSEIGRLRRLQVPDLNNNS------------------ 614 (789)
Q Consensus 553 ~c~~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~------------------ 614 (789)
.|.+++.+.+|+. +.......|.++ +|+.+.+..+ ++.+...+|... +|+.+++..+-
T Consensus 67 ~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~lp~~~~~i~~~~F~~~~l~~~~~ 142 (379)
T 4h09_A 67 SCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEFPGATTEIGNYIFYNSSVKRIVI 142 (379)
T ss_dssp TCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEECCTTCCEECTTTTTTCCCCEEEE
T ss_pred CCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccCCCccccccccccccceeeeeec
Confidence 4677777777754 333344556655 4666655433 443444445443 56666665432
Q ss_pred ---CccCCCccCcCCCCCcEEEcccCCCC-----------------------------------CCCCcccCCCCCCcEE
Q 041249 615 ---IGGEIPVNLSSCSNLIRIGLAKNQLM-----------------------------------GKIPSDFGSLSKIEVL 656 (789)
Q Consensus 615 ---i~~~~p~~~~~l~~L~~L~l~~N~l~-----------------------------------~~~~~~~~~l~~L~~L 656 (789)
++.+....|..+.+++.+.+..+... ......|....+|+.+
T Consensus 143 ~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i 222 (379)
T 4h09_A 143 PKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKI 222 (379)
T ss_dssp CTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEE
T ss_pred cceeeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeeccccccccccee
Confidence 12122334555555555554432211 0112234455566666
Q ss_pred EccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCccc
Q 041249 657 SLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQ 736 (789)
Q Consensus 657 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 736 (789)
.+..+ ++.+...+|.++..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.....+|.++++|+.+.+.++.++
T Consensus 223 ~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~ 299 (379)
T 4h09_A 223 TITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE 299 (379)
T ss_dssp ECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC
T ss_pred eeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc
Confidence 66544 45566677777888888888765 55566677888888888888654 55466677888888888888888887
Q ss_pred ccCCcccccCCCCccEEEccCCcccccCcccccCCCCCCeeeccCC
Q 041249 737 GNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASKLEVFQALNN 782 (789)
Q Consensus 737 ~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 782 (789)
.|+...|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..+
T Consensus 300 -~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 300 -TLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp -EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred -eehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 788888878888888888654 66566778888888888877544
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.60 E-value=1.3e-07 Score=102.00 Aligned_cols=146 Identities=14% Similarity=0.161 Sum_probs=106.3
Q ss_pred CCCcccccCCccEEEEEEcCCceEEEEEEec--ccc-chhhHHHHHHHHHHhcCC--CCccceeeeeeccCCCCCCceEE
Q 041249 274 SANLIGTGSFGSVYKGVLDEGRTTVTVKVFN--LHH-HRASRSFIAECRALRSIR--HRNLVKVFTACSGVDYQGNDFKA 348 (789)
Q Consensus 274 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~~~~~~ 348 (789)
..+.++.|.++.||+.... +..+++|... ... ......+..|.++++.+. +..+.++++++.+.... ...+
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~--g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVI--GRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTT--SSCE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCcc--CCeE
Confidence 3567889999999998875 4678888875 332 122356788999999986 45578888887654321 2468
Q ss_pred EEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCC--------------------------
Q 041249 349 LVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDC-------------------------- 402 (789)
Q Consensus 349 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-------------------------- 402 (789)
+||||+++..+.+.. ...++..++..++.+++..|+.||...
T Consensus 118 ~vme~v~G~~l~~~~------------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS------------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQ 185 (359)
T ss_dssp EEEECCCCBCCCCTT------------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHH
T ss_pred EEEEecCCeecCCCc------------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHH
Confidence 999999987764421 134678888999999999999999731
Q ss_pred -----------------------------CCCceecCCCCCceecCCCCc--eeeCcccccccC
Q 041249 403 -----------------------------QPITTHCDLKPSNILLDEEMV--SHVGDFGLARFL 435 (789)
Q Consensus 403 -----------------------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfgla~~~ 435 (789)
.+.++|||+++.||++++++. +.+.||+.+..-
T Consensus 186 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 186 YKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 256999999999999997753 589999988753
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.59 E-value=6.1e-07 Score=97.46 Aligned_cols=210 Identities=11% Similarity=0.042 Sum_probs=149.5
Q ss_pred eeeEeccCcccccccccccccCccccchhcccCCcccc------------cCcccccCccceeeecccCCCCccCCCccC
Q 041249 556 KVTILDLESLKLAGSILPHIGNLSFLKILNLENNSFTH------------EIPSEIGRLRRLQVPDLNNNSIGGEIPVNL 623 (789)
Q Consensus 556 ~l~~l~l~s~~~~~~~l~~l~~l~~L~~L~L~~N~l~~------------~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~ 623 (789)
.+.....+.. ........+..+..++.+.+..+.... .....+.....+..+.+..+.-. .....+
T Consensus 136 ~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f 213 (379)
T 4h09_A 136 SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKT-VTAYGF 213 (379)
T ss_dssp CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCE-ECTTTT
T ss_pred eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeE-Eeeccc
Confidence 3444444433 222334456666777766665544321 12223444445555555444333 556777
Q ss_pred cCCCCCcEEEcccCCCCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCe
Q 041249 624 SSCSNLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVI 703 (789)
Q Consensus 624 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 703 (789)
..+.+|+.+.+..+ +..+...+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.++++|+.
T Consensus 214 ~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~ 290 (379)
T 4h09_A 214 SYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTK 290 (379)
T ss_dssp TTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCE
T ss_pred ccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccc
Confidence 88889999988766 44366778889999999999766 77788888999999999999755 55566778999999999
Q ss_pred eeccCccccccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCcccccCcccccCCCC
Q 041249 704 LYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRITGAIPPSISNASK 773 (789)
Q Consensus 704 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 773 (789)
+.+.++.++.+...+|.++.+|+.++|..+ ++ .|+...|.++.+|+.+.+..+ ++.+...+|.++..
T Consensus 291 i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~~ 357 (379)
T 4h09_A 291 VVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSSI 357 (379)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSSC
T ss_pred ccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCCC
Confidence 999999888777889999999999999765 76 888888888999999999765 66666778877643
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.55 E-value=6.2e-09 Score=100.95 Aligned_cols=121 Identities=16% Similarity=0.142 Sum_probs=75.1
Q ss_pred CccccCCCCCCEEEccCC-cCCC----CCcccccCCCCCCEEEccCCcCCC----CCcccccCCCCCCEEeccCCCCCCc
Q 041249 38 PSSLGLCESLTTIGLFNN-NLSG----TIPPQLMGLTSLVALDLSRNQFRG----SFPTEVGNLINLETLTVSGNILQGE 108 (789)
Q Consensus 38 ~~~~~~l~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~ 108 (789)
...+...+.|++|+|++| .|+. .+...+...++|++|+|++|.+.. .+...+...++|++|+|++|+|+..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 344566777777777777 7763 244556667778888888887763 2344455566788888888887732
Q ss_pred ----CCccccCCcccccccc--cCCCCCccceeecCCcccCCCchhhhcCcccccEEecccCCCC
Q 041249 109 ----IPSTLGSCIKLEILEM--QGNVFQGLTILDLSRNKLSGEIPEFLVGLKVIENLNLSYNDLE 167 (789)
Q Consensus 109 ----~p~~~~~l~~L~~l~l--~~N~~~~l~~l~ls~N~l~~~~p~~~~~~~~l~~l~ls~N~~~ 167 (789)
+...+...++|++|+| ++|.+..-. ...+.+.+...++|++|++++|.+.
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g---------~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNV---------EMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHH---------HHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHH---------HHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3445555555555555 444443100 0014456667777888888888876
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.54 E-value=2.5e-08 Score=104.98 Aligned_cols=191 Identities=18% Similarity=0.156 Sum_probs=121.3
Q ss_pred CCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCC-CCc--cceeeeeeccCCCCCCceEEEEe
Q 041249 275 ANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR-HRN--LVKVFTACSGVDYQGNDFKALVY 351 (789)
Q Consensus 275 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~~~~~~~~~lv~ 351 (789)
.+.++.|....||+.. ..+++|..... .....+..|.+.++.+. +.. +.++++...... .....++||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~--~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE--TYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS--SCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC--CCCcceEEE
Confidence 4568999999999863 45888886432 34567889999998873 332 334444332211 111348899
Q ss_pred eccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC------------------------------
Q 041249 352 EFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD------------------------------ 401 (789)
Q Consensus 352 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~------------------------------ 401 (789)
|++++.++.+... ..++..++..++.+++..++.||..
T Consensus 96 ~~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
T 3sg8_A 96 TKIKGVPLTPLLL------------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSR 163 (304)
T ss_dssp ECCCCEECCHHHH------------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTT
T ss_pred cccCCeECCcccc------------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcc
Confidence 9999877764321 2356677778888888888888862
Q ss_pred -------------------------CCCCceecCCCCCceecCC--CCceeeCcccccccCCCCCCccceee--------
Q 041249 402 -------------------------CQPITTHCDLKPSNILLDE--EMVSHVGDFGLARFLPPTHVQTSSIG-------- 446 (789)
Q Consensus 402 -------------------------~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~~~~~~~~-------- 446 (789)
..+.++|+|+++.||++++ ...+.++||+.+....+...-.....
T Consensus 164 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~ 243 (304)
T 3sg8_A 164 ELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGME 243 (304)
T ss_dssp TSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHH
T ss_pred cCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHH
Confidence 1245899999999999998 45679999998876433211000000
Q ss_pred ----ecccccccC-cccCCCCCcCccccchhhHHHHHHHHHhcCCCC
Q 041249 447 ----VKGSIGYIA-PEYGLGSEVSTNGDVYSYGILMLELIIRKKPSD 488 (789)
Q Consensus 447 ----~~gt~~y~a-PE~~~~~~~~~k~DV~sfGvvl~elltG~~P~~ 488 (789)
.....++.. |+... +.....+.|++|.++|++.+|+.+|.
T Consensus 244 ~~~~~l~~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 244 FVSKILNHYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHHHHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 000011111 22111 11223689999999999999998864
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.51 E-value=1.3e-08 Score=103.82 Aligned_cols=93 Identities=18% Similarity=0.198 Sum_probs=52.5
Q ss_pred cccCccccch--hcccCCccc---ccCcccccCccceeeecccCCCCcc--CCCccCcCCCCCcEEEcccCCCCCCCCcc
Q 041249 574 HIGNLSFLKI--LNLENNSFT---HEIPSEIGRLRRLQVPDLNNNSIGG--EIPVNLSSCSNLIRIGLAKNQLMGKIPSD 646 (789)
Q Consensus 574 ~l~~l~~L~~--L~L~~N~l~---~~~~~~~~~l~~L~~L~Ls~N~i~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 646 (789)
.+...+.|+. ++++.|+.. +..+.....+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 136 ~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 136 GLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp TGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred HcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 3555666666 667777543 1112222456677777777777775 2344555667777777777777643 12
Q ss_pred cCCCC--CCcEEEccCCCCCccCC
Q 041249 647 FGSLS--KIEVLSLGFNNLIGSIP 668 (789)
Q Consensus 647 ~~~l~--~L~~L~L~~N~l~~~~~ 668 (789)
+..+. +|++|+|++|.+.+..|
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhhcccCCcceEEccCCcCccccC
Confidence 22222 56666666666654433
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.51 E-value=8.1e-09 Score=105.28 Aligned_cols=106 Identities=16% Similarity=0.184 Sum_probs=65.4
Q ss_pred hcccCCcccccCcc-cccCccceee--ecccCCCCccCCCc----cCcCCCCCcEEEcccCCCCCC--CCcccCCCCCCc
Q 041249 584 LNLENNSFTHEIPS-EIGRLRRLQV--PDLNNNSIGGEIPV----NLSSCSNLIRIGLAKNQLMGK--IPSDFGSLSKIE 654 (789)
Q Consensus 584 L~L~~N~l~~~~~~-~~~~l~~L~~--L~Ls~N~i~~~~p~----~~~~l~~L~~L~l~~N~l~~~--~~~~~~~l~~L~ 654 (789)
|...+|.-++.++- .|...+.|.. ++++.|+.. .++. ...++++|++|+|++|+|++. +|+.+..+++|+
T Consensus 121 l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~ 199 (267)
T 3rw6_A 121 MSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLK 199 (267)
T ss_dssp HHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCC
T ss_pred HHhccchhccccCHHHcCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCC
Confidence 44444544443332 2666677777 788888654 3332 224678888888888888863 345566778888
Q ss_pred EEEccCCCCCccCCcCCCCCC--CCCEEEccCCcCCccCC
Q 041249 655 VLSLGFNNLIGSIPPPLGNLS--SLRKISLAINNLAGSIP 692 (789)
Q Consensus 655 ~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~ 692 (789)
.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|
T Consensus 200 ~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 200 ILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp EEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred EEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 888888888754 2233333 66666666666654443
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=1.1e-08 Score=99.26 Aligned_cols=43 Identities=14% Similarity=0.061 Sum_probs=20.1
Q ss_pred cccCccceeeecccCC-CCccC----CCccCcCCCCCcEEEcccCCCC
Q 041249 598 EIGRLRRLQVPDLNNN-SIGGE----IPVNLSSCSNLIRIGLAKNQLM 640 (789)
Q Consensus 598 ~~~~l~~L~~L~Ls~N-~i~~~----~p~~~~~l~~L~~L~l~~N~l~ 640 (789)
.+...+.|++|+|++| .|... +...+...++|++|+|++|.|.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 3444555566666655 55421 1223333444555555555443
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.05 E-value=9.6e-06 Score=85.74 Aligned_cols=138 Identities=17% Similarity=0.174 Sum_probs=98.8
Q ss_pred CCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCC---C-ccceeeeeeccCCCCCCce
Q 041249 271 GFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRH---R-NLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 271 ~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~-niv~l~~~~~~~~~~~~~~ 346 (789)
.....+.++.|....||+. +..+++|+.... .....+..|.+++..+.+ + .+.++++. . .
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~-----~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----S-----D 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----C-----S
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----C-----C
Confidence 4556678999999999998 566888876422 223568899998888865 1 23344443 1 4
Q ss_pred EEEEeeccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCC-----------------------
Q 041249 347 KALVYEFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQ----------------------- 403 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~----------------------- 403 (789)
.++||||+++.++..... ..++..++..++.+++..++.||....
T Consensus 102 ~~lvme~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQY------------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKK 169 (320)
T ss_dssp SCEEEECCCCBCCCHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHH
T ss_pred cEEEEeecCCcccccccc------------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHH
Confidence 589999999887763321 234566677778888888888875432
Q ss_pred -------------------------------------CCceecCCCCCceecCCCCceeeCcccccccCC
Q 041249 404 -------------------------------------PITTHCDLKPSNILLDEEMVSHVGDFGLARFLP 436 (789)
Q Consensus 404 -------------------------------------~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 436 (789)
+.++|+|++|.||+++++..+.++||+.+..-+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 170 LLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999997667999999886543
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.83 E-value=6.9e-05 Score=77.66 Aligned_cols=76 Identities=17% Similarity=0.094 Sum_probs=59.6
Q ss_pred CCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCC---ccceeeeeeccCCCCCCceEEEE
Q 041249 274 SANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR---NLVKVFTACSGVDYQGNDFKALV 350 (789)
Q Consensus 274 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~~lv 350 (789)
..+.||.|.++.||++... +|+.+++|+...........+..|++.++.+++. .+.+++++. ..++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~lv 88 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTLA 88 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEEE
T ss_pred ceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEEE
Confidence 4567999999999999876 6889999997544333456889999999999765 467777653 25899
Q ss_pred eeccCCCCh
Q 041249 351 YEFMQNGSL 359 (789)
Q Consensus 351 ~e~~~~g~L 359 (789)
|||++++++
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999998864
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.81 E-value=5.6e-05 Score=79.22 Aligned_cols=138 Identities=17% Similarity=0.106 Sum_probs=92.2
Q ss_pred CCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCC---ccceeeeeeccCCCCCCceEEEEe
Q 041249 275 ANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR---NLVKVFTACSGVDYQGNDFKALVY 351 (789)
Q Consensus 275 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~~lv~ 351 (789)
.+.++.|....||+. +..+++|+.. .......+..|.+++..+.+. .+.+++.++... ....++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~----~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS----DGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT----TSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC----CCceEEEE
Confidence 456788888899987 4668888853 223456789999999999642 245555555321 12568999
Q ss_pred eccCCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC------------------------------
Q 041249 352 EFMQNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD------------------------------ 401 (789)
Q Consensus 352 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~------------------------------ 401 (789)
||+++.++.+... ..++..++..++.+++..|+.||..
T Consensus 93 e~i~G~~l~~~~~------------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~ 160 (306)
T 3tdw_A 93 RKVQGQILGEDGM------------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQV 160 (306)
T ss_dssp ECCCSEECHHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHT
T ss_pred eccCCeECchhhh------------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 9999877765321 1134444555555555555555543
Q ss_pred ---------------------------CCCCceecCCCCCceecCC---CCc-eeeCcccccccC
Q 041249 402 ---------------------------CQPITTHCDLKPSNILLDE---EMV-SHVGDFGLARFL 435 (789)
Q Consensus 402 ---------------------------~~~~ivH~dlk~~Nill~~---~~~-~kl~Dfgla~~~ 435 (789)
..+.++|+|+++.||++++ ++. ..|+||+.+..-
T Consensus 161 ~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 161 FPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred ccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2334699999999999997 455 489999987653
No 421
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.81 E-value=5.8e-06 Score=78.08 Aligned_cols=34 Identities=15% Similarity=0.094 Sum_probs=15.0
Q ss_pred CCcEEEcccCCCCCCCCcccCCCCCCcEEEccCC
Q 041249 628 NLIRIGLAKNQLMGKIPSDFGSLSKIEVLSLGFN 661 (789)
Q Consensus 628 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 661 (789)
+|+.||++++.|+..--..+.++++|+.|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555544322223334444444444444
No 422
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.65 E-value=0.00012 Score=74.97 Aligned_cols=136 Identities=18% Similarity=0.081 Sum_probs=92.5
Q ss_pred cccccCCc-cEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCC-CCccceeeeeeccCCCCCCceEEEEeecc
Q 041249 277 LIGTGSFG-SVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR-HRNLVKVFTACSGVDYQGNDFKALVYEFM 354 (789)
Q Consensus 277 ~ig~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 354 (789)
.+..|..+ .||+.....++..+++|+-... ....+..|.+.++.+. +--+.++++++...+ ..++|||++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~-----~~~lvme~l 102 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD-----DAWLLTTAI 102 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT-----EEEEEEECC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC-----eEEEEEEee
Confidence 34445544 6999888767888999986432 3456788999988874 333667777776554 789999999
Q ss_pred CCCChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcC---------------------------------
Q 041249 355 QNGSLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHD--------------------------------- 401 (789)
Q Consensus 355 ~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~--------------------------------- 401 (789)
++.++.+..... ......++.+++..|+-||..
T Consensus 103 ~G~~~~~~~~~~--------------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (272)
T 4gkh_A 103 PGKTAFQVLEEY--------------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFD 168 (272)
T ss_dssp CSEEHHHHHHHC--------------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCC
T ss_pred CCccccccccCC--------------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcc
Confidence 987766543211 112234455555555555542
Q ss_pred ----------------------CCCCceecCCCCCceecCCCCceeeCccccccc
Q 041249 402 ----------------------CQPITTHCDLKPSNILLDEEMVSHVGDFGLARF 434 (789)
Q Consensus 402 ----------------------~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 434 (789)
..+.++|+|+.+.||+++++..+-|+||+.+..
T Consensus 169 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 169 DERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp GGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 122369999999999999877778999987654
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.59 E-value=2.2e-05 Score=74.13 Aligned_cols=87 Identities=9% Similarity=0.076 Sum_probs=62.5
Q ss_pred CCCCEEEccCCcCCccCCccccCCCCCCeeeccCcc-ccccCCccccCC----CCccEEEccCCc-ccccCCcccccCCC
Q 041249 675 SSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVNR-LSGIVPSSIFNI----SSIAEFDVGENK-IQGNIPLDYGFTLQ 748 (789)
Q Consensus 675 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~ip~~~~~~l~ 748 (789)
.+|+.|||+++.|+..--..+.++++|+.|+|+++. |++.--..+..+ ++|++|+|++|. |++.-=..+. .++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~-~~~ 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALH-HFR 139 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGG-GCT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHh-cCC
Confidence 468999999998887666677888899999999884 775544555554 368888888875 7632112233 678
Q ss_pred CccEEEccCCc-ccc
Q 041249 749 NLQYFSIGTNR-ITG 762 (789)
Q Consensus 749 ~L~~L~L~~N~-l~~ 762 (789)
+|++|+|+++. +++
T Consensus 140 ~L~~L~L~~c~~Itd 154 (176)
T 3e4g_A 140 NLKYLFLSDLPGVKE 154 (176)
T ss_dssp TCCEEEEESCTTCCC
T ss_pred CCCEEECCCCCCCCc
Confidence 88888888875 653
No 424
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.44 E-value=0.00034 Score=74.99 Aligned_cols=76 Identities=11% Similarity=0.094 Sum_probs=54.5
Q ss_pred CCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCc--cceeeeeeccCCCCCCceEEEEe
Q 041249 274 SANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRN--LVKVFTACSGVDYQGNDFKALVY 351 (789)
Q Consensus 274 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~~~~~~lv~ 351 (789)
..+.++.|....+|+... ++..+++|..... ..+..|.+.+..+.... +.++++++.... ...++||
T Consensus 45 ~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~----g~~~lv~ 113 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE----SLTYCIS 113 (362)
T ss_dssp EEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS----SCEEEEE
T ss_pred eEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC----CCeEEEE
Confidence 356688899999999875 4788999987432 25888989988886433 455666654332 2579999
Q ss_pred eccCCCChh
Q 041249 352 EFMQNGSLE 360 (789)
Q Consensus 352 e~~~~g~L~ 360 (789)
||+++.++.
T Consensus 114 e~l~G~~l~ 122 (362)
T 3ovc_A 114 RRAQGVTLQ 122 (362)
T ss_dssp ECCCSEETT
T ss_pred EecCCCCcc
Confidence 999976554
No 425
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.40 E-value=2.8e-05 Score=74.86 Aligned_cols=117 Identities=11% Similarity=0.112 Sum_probs=72.9
Q ss_pred ccCCCCCCEEEccCC-cCCC----CCcccccCCCCCCEEEccCCcCCC----CCcccccCCCCCCEEeccCCCCCCc---
Q 041249 41 LGLCESLTTIGLFNN-NLSG----TIPPQLMGLTSLVALDLSRNQFRG----SFPTEVGNLINLETLTVSGNILQGE--- 108 (789)
Q Consensus 41 ~~~l~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~--- 108 (789)
+..-+.|++|+|++| +|.. .+...+..-+.|+.|+|++|++.. .+...+..-+.|++|+|++|+|+..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344567777888774 7752 245566777788888888888762 2344455567788888888888732
Q ss_pred -CCccccCCcccccccccCCCCCccceeecCCcccCC----CchhhhcCcccccEEecccCCCC
Q 041249 109 -IPSTLGSCIKLEILEMQGNVFQGLTILDLSRNKLSG----EIPEFLVGLKVIENLNLSYNDLE 167 (789)
Q Consensus 109 -~p~~~~~l~~L~~l~l~~N~~~~l~~l~ls~N~l~~----~~p~~~~~~~~l~~l~ls~N~~~ 167 (789)
+-.++..-+.|++|+|++|.. +.+.. .+-+.+..-++|+.|+++.|.+.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~----------~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQ----------SVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSS----------CCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHhhCCceeEEECCCCcC----------cCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 223444444455555543321 02221 35567777778888999888763
No 426
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.37 E-value=6.3e-05 Score=72.37 Aligned_cols=111 Identities=11% Similarity=0.068 Sum_probs=80.0
Q ss_pred cCCccCCeEecCCC-cCCC----CCCccccCCCCCCEEEccCCcCCC----CCcccccCCCCCCEEEccCCcCCC----C
Q 041249 18 GNLKKLVEPYVSDN-FLKG----SIPSSLGLCESLTTIGLFNNNLSG----TIPPQLMGLTSLVALDLSRNQFRG----S 84 (789)
Q Consensus 18 ~~l~~l~~L~ls~n-~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~----~ 84 (789)
.+-+.|++|+|++| +|.. .+.+++..-+.|+.|+|++|+|+. .+...+..-+.|++|+|++|+|+. .
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 45678999999996 7763 355667777899999999999983 356667788999999999999984 2
Q ss_pred CcccccCCCCCCEEeccCC---CCCC----cCCccccCCcccccccccCCC
Q 041249 85 FPTEVGNLINLETLTVSGN---ILQG----EIPSTLGSCIKLEILEMQGNV 128 (789)
Q Consensus 85 ~p~~~~~l~~L~~L~l~~N---~l~~----~~p~~~~~l~~L~~l~l~~N~ 128 (789)
+-..+..-+.|++|+|++| .+.. .+-..+..-+.|+.|+++.|.
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 4455777778999999976 3442 233444555555555554443
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.32 E-value=0.00053 Score=74.58 Aligned_cols=76 Identities=20% Similarity=0.155 Sum_probs=48.6
Q ss_pred CCcccccCCccEEEEEEcCCceEEEEEEeccccc-------hhhHHHHHHHHHHhcCCC--Cccc-eeeeeeccCCCCCC
Q 041249 275 ANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHH-------RASRSFIAECRALRSIRH--RNLV-KVFTACSGVDYQGN 344 (789)
Q Consensus 275 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~niv-~l~~~~~~~~~~~~ 344 (789)
.+.+|.|..+.||++....+++.|+||....... .....+..|.++++.+.. +..+ +++.+.. +
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~--~---- 108 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT--E---- 108 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET--T----
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcC--C----
Confidence 4578999999999998765678899998653211 123456778888887732 4444 4554422 1
Q ss_pred ceEEEEeeccCCC
Q 041249 345 DFKALVYEFMQNG 357 (789)
Q Consensus 345 ~~~~lv~e~~~~g 357 (789)
..++|||++.+.
T Consensus 109 -~~~lvmE~l~g~ 120 (397)
T 2olc_A 109 -MAVTVMEDLSHL 120 (397)
T ss_dssp -TTEEEECCCTTS
T ss_pred -ccEEEEEeCCCc
Confidence 357999999763
No 428
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.26 E-value=0.00061 Score=72.88 Aligned_cols=84 Identities=7% Similarity=-0.016 Sum_probs=54.7
Q ss_pred Ccc-cccCCccEEEEEEc--C----CceEEEEEEecccc---chhhHHHHHHHHHHhcCC-C--CccceeeeeeccCCCC
Q 041249 276 NLI-GTGSFGSVYKGVLD--E----GRTTVTVKVFNLHH---HRASRSFIAECRALRSIR-H--RNLVKVFTACSGVDYQ 342 (789)
Q Consensus 276 ~~i-g~G~~g~Vy~~~~~--~----~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~~~~ 342 (789)
+.| +.|....+|+.... . +++.+++|...... ......+..|.++++.+. + -.+.++++++......
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 77888999988753 1 15678899865432 111245778888888874 3 3466777776543211
Q ss_pred CCceEEEEeeccCCCChhh
Q 041249 343 GNDFKALVYEFMQNGSLEE 361 (789)
Q Consensus 343 ~~~~~~lv~e~~~~g~L~~ 361 (789)
...++||||+++..+.+
T Consensus 106 --g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 --GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp --SSCEEEEECCCCBCCCB
T ss_pred --CCceEEEEecCCCChhh
Confidence 24589999999876654
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.07 E-value=0.00067 Score=60.91 Aligned_cols=56 Identities=18% Similarity=0.282 Sum_probs=35.9
Q ss_pred EEEccCCcCC-ccCCccccCCCCCCeeeccCccccccCCccccCCCCccEEEccCCccc
Q 041249 679 KISLAINNLA-GSIPFTLSKLKNLVILYLGVNRLSGIVPSSIFNISSIAEFDVGENKIQ 736 (789)
Q Consensus 679 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 736 (789)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6667777765 24454433 25677777777777555666667777777777777664
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.06 E-value=0.00076 Score=60.53 Aligned_cols=57 Identities=18% Similarity=0.248 Sum_probs=46.8
Q ss_pred CeeeccCcccc-ccCCccccCCCCccEEEccCCcccccCCcccccCCCCccEEEccCCccc
Q 041249 702 VILYLGVNRLS-GIVPSSIFNISSIAEFDVGENKIQGNIPLDYGFTLQNLQYFSIGTNRIT 761 (789)
Q Consensus 702 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~L~~N~l~ 761 (789)
..++.+++.++ ..+|..+. ++|+.|+|++|+|+ .+|..+|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 47899999987 34565432 36999999999998 899998888999999999999875
No 431
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=96.71 E-value=0.009 Score=63.02 Aligned_cols=44 Identities=27% Similarity=0.216 Sum_probs=34.1
Q ss_pred HHHHHhhhhc----------CCCCCceecCCCCCceecCCCCceeeCccccccc
Q 041249 391 VASALDYLHH----------DCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF 434 (789)
Q Consensus 391 ia~gL~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 434 (789)
+..++.+|+. .....++|||+.+.||+++.+..+.++||+.+..
T Consensus 199 ~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 199 GLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 4445666663 1245699999999999998888999999987654
No 432
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.65 E-value=0.0076 Score=62.79 Aligned_cols=76 Identities=17% Similarity=0.126 Sum_probs=57.2
Q ss_pred CCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCC---CCccceeeeeeccCCCCCCceEEEE
Q 041249 274 SANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIR---HRNLVKVFTACSGVDYQGNDFKALV 350 (789)
Q Consensus 274 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~~~~~~lv 350 (789)
..+.|+.|....+|+... ++..+++|+.... ....+..|.+.++.+. ...+.++++.+.... ..++|
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g-----~~~lv 109 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG-----HSFLL 109 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS-----EEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC-----ceEEE
Confidence 345789999999999876 3678889987532 3567888999888883 356777777765433 68999
Q ss_pred eeccCCCCh
Q 041249 351 YEFMQNGSL 359 (789)
Q Consensus 351 ~e~~~~g~L 359 (789)
|||+++..+
T Consensus 110 me~l~G~~~ 118 (312)
T 3jr1_A 110 LEALNKSKN 118 (312)
T ss_dssp EECCCCCCC
T ss_pred EEeccCCCC
Confidence 999998754
No 433
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.62 E-value=0.0044 Score=63.89 Aligned_cols=78 Identities=17% Similarity=0.103 Sum_probs=56.8
Q ss_pred CCCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCC---ccceeeeeeccCCCCCCceE
Q 041249 271 GFSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHR---NLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 271 ~f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~ 347 (789)
.....+.+|.|..+.||+.+.. +|+.|++|+...........+..|.+.|+.+.-. -+.+++++. ..
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~~ 85 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DR 85 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TT
T ss_pred CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------Cc
Confidence 3445667899999999999987 7889999987655545556789999999888422 244445442 23
Q ss_pred EEEeeccCCCC
Q 041249 348 ALVYEFMQNGS 358 (789)
Q Consensus 348 ~lv~e~~~~g~ 358 (789)
++||||+..+.
T Consensus 86 ~lv~e~l~~~~ 96 (288)
T 3f7w_A 86 TLAMEWVDERP 96 (288)
T ss_dssp EEEEECCCCCC
T ss_pred eEEEEeecccC
Confidence 78999988764
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.43 E-value=0.0054 Score=63.72 Aligned_cols=71 Identities=10% Similarity=0.090 Sum_probs=43.3
Q ss_pred CCCCCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCcc-ceeeeeeccCCCCCCceEEEE
Q 041249 272 FSSANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL-VKVFTACSGVDYQGNDFKALV 350 (789)
Q Consensus 272 f~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~~lv 350 (789)
+...+.|+.|....+|+. ..+++|+....... ......|.+.++.+...++ .++++.+.+ ..+++
T Consensus 20 ~~~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~-------~~~~v 85 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPA-------TGVMV 85 (301)
T ss_dssp CCSCEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT-------TCCEE
T ss_pred ccceeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECC-------CCEEE
Confidence 444678888999999998 45888887543211 1123567777776632222 455555432 24689
Q ss_pred eecc-CC
Q 041249 351 YEFM-QN 356 (789)
Q Consensus 351 ~e~~-~~ 356 (789)
+||+ ++
T Consensus 86 ~e~i~~g 92 (301)
T 3dxq_A 86 TRYIAGA 92 (301)
T ss_dssp EECCTTC
T ss_pred EeecCCC
Confidence 9999 44
No 435
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.08 E-value=0.018 Score=62.91 Aligned_cols=80 Identities=10% Similarity=0.060 Sum_probs=45.6
Q ss_pred CCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCcccCCCC---CcCccccchhhHHHHHH
Q 041249 403 QPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAPEYGLGS---EVSTNGDVYSYGILMLE 479 (789)
Q Consensus 403 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~k~DV~sfGvvl~e 479 (789)
.+.++|||+++.||+++++. ++++||+.+..-++...-.... ..-...|++|+..... ......++++....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYL-GNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHH-HHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHH-HHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 45599999999999998776 9999999887643221100000 0001234555544311 11223445566666776
Q ss_pred HHHhc
Q 041249 480 LIIRK 484 (789)
Q Consensus 480 lltG~ 484 (789)
..+++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.45 E-value=0.037 Score=59.21 Aligned_cols=150 Identities=11% Similarity=0.144 Sum_probs=82.5
Q ss_pred CCcccccCCccEEEEEEcC-------CceEEEEEEeccccchhhHHHHHHHHHHhcCC-CCccceeeeeeccCCCCCCce
Q 041249 275 ANLIGTGSFGSVYKGVLDE-------GRTTVTVKVFNLHHHRASRSFIAECRALRSIR-HRNLVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 275 ~~~ig~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 346 (789)
.+.+..|-...+|+..... .++.+++|+.-.. ......+.+|.++++.+. +.-..++++.+..
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~-------- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE-------- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT--------
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC--------
Confidence 3456678888999998752 3578999986322 223455668989888874 3223566666532
Q ss_pred EEEEeeccCCCChhhh-ccCC----------CCCccc-cCCCCCCC--HHHHHHHHHHHHH-------------------
Q 041249 347 KALVYEFMQNGSLEEW-LYPV----------NREDEV-DKAPRNLN--LLQRLNIAIDVAS------------------- 393 (789)
Q Consensus 347 ~~lv~e~~~~g~L~~~-l~~~----------~~~~~~-~~~~~~l~--~~~~~~i~~~ia~------------------- 393 (789)
.+|+||+++.++..- +... .+.... ...++... |.++.++..++..
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 389999997554321 0000 000000 00112222 3445555544322
Q ss_pred HHhh----hhcC-CCCCceecCCCCCceecCCC----CceeeCccccccc
Q 041249 394 ALDY----LHHD-CQPITTHCDLKPSNILLDEE----MVSHVGDFGLARF 434 (789)
Q Consensus 394 gL~~----LH~~-~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgla~~ 434 (789)
.+.+ |... ....++|+|+.+.||+++++ ..+.++||..+..
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1222 2222 23458999999999999876 6889999987754
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.39 E-value=0.055 Score=59.48 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=47.4
Q ss_pred CCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCcc-ceeeeeeccCCCCCCceEEEEeec
Q 041249 275 ANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL-VKVFTACSGVDYQGNDFKALVYEF 353 (789)
Q Consensus 275 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~~lv~e~ 353 (789)
.+.|+.|-...+|+......+..+++|+........ -....|.++++.+...++ .++++.+. . .+|+||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~-------G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N-------GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T-------EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C-------eEEEEe
Confidence 346777888999999886435889999874332111 123678888888864444 45666652 1 259999
Q ss_pred cCCCCh
Q 041249 354 MQNGSL 359 (789)
Q Consensus 354 ~~~g~L 359 (789)
+++.++
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 986443
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.33 E-value=0.029 Score=61.34 Aligned_cols=72 Identities=19% Similarity=0.291 Sum_probs=47.6
Q ss_pred CcccccCCccEEEEEEcC-------CceEEEEEEeccccchhhHHHHHHHHHHhcCCCCcc-ceeeeeeccCCCCCCceE
Q 041249 276 NLIGTGSFGSVYKGVLDE-------GRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRNL-VKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 276 ~~ig~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~ 347 (789)
+.|+.|....+|+..... .++.+++|+..... ....+..|.++++.+...++ .++++.+..
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~--------- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG--------- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT---------
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC---------
Confidence 457778889999998753 25789999984321 11455678888888843333 556665431
Q ss_pred EEEeeccCCCC
Q 041249 348 ALVYEFMQNGS 358 (789)
Q Consensus 348 ~lv~e~~~~g~ 358 (789)
.+|+||+++.+
T Consensus 148 g~v~e~l~G~~ 158 (429)
T 1nw1_A 148 GRLEEYIPSRP 158 (429)
T ss_dssp EEEECCCCEEE
T ss_pred CEEEEEeCCcc
Confidence 38999997533
No 439
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=95.05 E-value=0.11 Score=54.61 Aligned_cols=33 Identities=27% Similarity=0.236 Sum_probs=27.9
Q ss_pred CCCceecCCCCCceecCCC----CceeeCcccccccC
Q 041249 403 QPITTHCDLKPSNILLDEE----MVSHVGDFGLARFL 435 (789)
Q Consensus 403 ~~~ivH~dlk~~Nill~~~----~~~kl~Dfgla~~~ 435 (789)
...++|||+.+.||+++++ ..+.++||+.+..-
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 4569999999999999875 67899999987653
No 440
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=94.73 E-value=0.051 Score=56.68 Aligned_cols=171 Identities=13% Similarity=0.081 Sum_probs=83.6
Q ss_pred ccHHHHHHhhcCCCC-----CCcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCc--ccee
Q 041249 260 LSYQNLHNATDGFSS-----ANLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRN--LVKV 332 (789)
Q Consensus 260 ~~~~~~~~~~~~f~~-----~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l 332 (789)
++.+++...-..|.. .+.|+.|....+|+.... + ..+++|..... .....+..|++++..+.... +.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~-g~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-K-DPLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-S-CCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-C-ccEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 444555554444554 234666777899998875 3 36888987642 12234566777777663222 2333
Q ss_pred eeeeccCCC-CCCceEEEEeeccCCCChhh--------------hccCCCCC--ccccCCCCCCCHHHHHH---------
Q 041249 333 FTACSGVDY-QGNDFKALVYEFMQNGSLEE--------------WLYPVNRE--DEVDKAPRNLNLLQRLN--------- 386 (789)
Q Consensus 333 ~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~--------------~l~~~~~~--~~~~~~~~~l~~~~~~~--------- 386 (789)
+........ .-....+++++|+++..+.. .++..... ...........|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 322110000 00124689999998754321 01100000 00000000011221100
Q ss_pred ---HHHHHHHHHhhhhc----CCCCCceecCCCCCceecCCCCceeeCccccccc
Q 041249 387 ---IAIDVASALDYLHH----DCQPITTHCDLKPSNILLDEEMVSHVGDFGLARF 434 (789)
Q Consensus 387 ---i~~~ia~gL~~LH~----~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 434 (789)
+...+...+++++. .....++|+|+.+.||+++++..+.++||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 00113334444442 1234589999999999999876668999987653
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=94.48 E-value=0.056 Score=57.73 Aligned_cols=73 Identities=15% Similarity=0.252 Sum_probs=42.8
Q ss_pred CcccccCCccEEEEEEcCC--------ceEEEEEEeccccchhhHHHHHHHHHHhcCCCCc-cceeeeeeccCCCCCCce
Q 041249 276 NLIGTGSFGSVYKGVLDEG--------RTTVTVKVFNLHHHRASRSFIAECRALRSIRHRN-LVKVFTACSGVDYQGNDF 346 (789)
Q Consensus 276 ~~ig~G~~g~Vy~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~~~~ 346 (789)
+.++.|....+|+.....+ ++.+++|+....... ......|.++++.+...+ ..++++...
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~~--------- 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTFN--------- 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEET---------
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEecC---------
Confidence 4567788889999987531 268899987543221 112467788887774333 345565431
Q ss_pred EEEEeeccCCCC
Q 041249 347 KALVYEFMQNGS 358 (789)
Q Consensus 347 ~~lv~e~~~~g~ 358 (789)
.++|+||+++..
T Consensus 109 ~~~v~e~i~G~~ 120 (369)
T 3c5i_A 109 GGRIEEWLYGDP 120 (369)
T ss_dssp TEEEEECCCSEE
T ss_pred CcEEEEEecCCc
Confidence 268999998643
No 442
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=93.91 E-value=0.62 Score=48.38 Aligned_cols=79 Identities=11% Similarity=0.137 Sum_probs=46.7
Q ss_pred CcccccCCccEEEEEEcCCceEEEEEEeccccchhhHHHHHHHHHHhcCCCCc--cceeeeeeccCCC-CCCceEEEEee
Q 041249 276 NLIGTGSFGSVYKGVLDEGRTTVTVKVFNLHHHRASRSFIAECRALRSIRHRN--LVKVFTACSGVDY-QGNDFKALVYE 352 (789)
Q Consensus 276 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~-~~~~~~~lv~e 352 (789)
..++ |....||+.... +|+.+++|...... .....+..|.+++..+.... +.+++.. ..... ......++++|
T Consensus 32 ~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~-~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF-NGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB-TTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec-CCcEEEEECCEEEEEEE
Confidence 3466 778899988765 46679999986332 12345667888777773222 3444443 11100 00125678999
Q ss_pred ccCCCC
Q 041249 353 FMQNGS 358 (789)
Q Consensus 353 ~~~~g~ 358 (789)
|+++..
T Consensus 108 ~i~G~~ 113 (328)
T 1zyl_A 108 SVGGRQ 113 (328)
T ss_dssp CCCCEE
T ss_pred ecCCCC
Confidence 998754
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=93.28 E-value=0.43 Score=50.09 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=28.3
Q ss_pred CCCceecCCCCCceecCCCCceeeCcccccccC
Q 041249 403 QPITTHCDLKPSNILLDEEMVSHVGDFGLARFL 435 (789)
Q Consensus 403 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 435 (789)
...++|+|+.+.||++++++.+.++||+.+..-
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 445999999999999998888999999876653
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.94 E-value=0.29 Score=52.49 Aligned_cols=32 Identities=28% Similarity=0.313 Sum_probs=27.0
Q ss_pred CCCceecCCCCCceecCCC------CceeeCccccccc
Q 041249 403 QPITTHCDLKPSNILLDEE------MVSHVGDFGLARF 434 (789)
Q Consensus 403 ~~~ivH~dlk~~Nill~~~------~~~kl~Dfgla~~ 434 (789)
...++|+|+.+.||+++++ ..+.++||..+..
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 3458999999999999877 7899999987653
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=89.97 E-value=0.32 Score=52.70 Aligned_cols=74 Identities=11% Similarity=0.150 Sum_probs=46.6
Q ss_pred CcccccCCccEEEEEEcCC-------ceEEEEEEeccccchhhHHHHHHHHHHhcCC-CCccceeeeeeccCCCCCCceE
Q 041249 276 NLIGTGSFGSVYKGVLDEG-------RTTVTVKVFNLHHHRASRSFIAECRALRSIR-HRNLVKVFTACSGVDYQGNDFK 347 (789)
Q Consensus 276 ~~ig~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~ 347 (789)
+.+..|-...+|+...... ++.+++|+..... ...-...+|.++++.+. +.-..++++.+. .
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~---------~ 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP---------E 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET---------T
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC---------C
Confidence 4566677889999987621 5789999864332 11223467888887774 222345555432 2
Q ss_pred EEEeeccCCCCh
Q 041249 348 ALVYEFMQNGSL 359 (789)
Q Consensus 348 ~lv~e~~~~g~L 359 (789)
+.|+||+++.++
T Consensus 146 ~~I~efI~G~~l 157 (424)
T 3mes_A 146 GRIEEFIDGEPL 157 (424)
T ss_dssp EEEEECCCSEEC
T ss_pred CEEEEEeCCccC
Confidence 689999998653
No 446
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=87.39 E-value=0.4 Score=33.03 Aligned_cols=30 Identities=17% Similarity=0.186 Sum_probs=17.8
Q ss_pred EeehhhHHHHHHHHHHHHHHHHHHHhcccC
Q 041249 218 LVIAIVSGLMGLALTLSISFLCWVRKRKEQ 247 (789)
Q Consensus 218 ~~v~~~~~~~~v~~~~~~~~~~~~~~~k~~ 247 (789)
++.++++++..+++++.+++++|+|+++++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 345555556666666666666777665543
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=86.96 E-value=0.47 Score=32.77 Aligned_cols=29 Identities=17% Similarity=0.071 Sum_probs=17.6
Q ss_pred EeehhhHHHHHHHHHHHHHHHHHHHhccc
Q 041249 218 LVIAIVSGLMGLALTLSISFLCWVRKRKE 246 (789)
Q Consensus 218 ~~v~~~~~~~~v~~~~~~~~~~~~~~~k~ 246 (789)
+++++++++..+++++++++++|+|++.+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 45555666666666666666666666543
No 448
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=86.00 E-value=0.96 Score=43.63 Aligned_cols=103 Identities=18% Similarity=0.147 Sum_probs=65.5
Q ss_pred ChhhhccCCCCCccccCCCCCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCcccccccCCC
Q 041249 358 SLEEWLYPVNREDEVDKAPRNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPP 437 (789)
Q Consensus 358 ~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 437 (789)
+|.+.|.. .+.++++.++..++.|.+.+|.-.-....+ ..+=+.|..|++..+|.+...+ ..+.
T Consensus 34 SL~eIL~~---------~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~---- 97 (229)
T 2yle_A 34 SLEEILRL---------YNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD---- 97 (229)
T ss_dssp EHHHHHHH---------HTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C-------
T ss_pred cHHHHHHH---------cCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc----
Confidence 68888754 367899999999999999998876211101 1223356888888888887654 1110
Q ss_pred CCCccceeeecccccccCcccCCCCCcCccccchhhHHHHHHHHHhcCCC
Q 041249 438 THVQTSSIGVKGSIGYIAPEYGLGSEVSTNGDVYSYGILMLELIIRKKPS 487 (789)
Q Consensus 438 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~sfGvvl~elltG~~P~ 487 (789)
.....+.|||... ...+.+.=|||+|+++|.-+--..|-
T Consensus 98 ----------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 98 ----------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp -------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred ----------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 1223466888763 34578899999999999988744443
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.89 E-value=3.8 Score=39.40 Aligned_cols=88 Identities=16% Similarity=0.247 Sum_probs=65.1
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhhcCCCCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCc
Q 041249 377 RNLNLLQRLNIAIDVASALDYLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456 (789)
Q Consensus 377 ~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aP 456 (789)
+.++...+++++..|+....++++ -+|--+.|+|++++.++.+++.-.|+-..++|..
T Consensus 76 k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f~~~~~p~i~~RGik~~l~P~~----------------- 133 (215)
T 4ann_A 76 KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFFTRDGLPIAKTRGLQNVVDPLP----------------- 133 (215)
T ss_dssp GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEECTTSCEEESCCEETTTBSCCC-----------------
T ss_pred HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEEcCCCCEEEEEccCccCCCCCC-----------------
Confidence 356788999999999998877764 3688899999999999999999888755544332
Q ss_pred ccCCCCCcCccccchhhHHHHHHHHHhcCCCCccccC
Q 041249 457 EYGLGSEVSTNGDVYSYGILMLELIIRKKPSDIMFEG 493 (789)
Q Consensus 457 E~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~~~~~ 493 (789)
.++..=.-.+=+++..+++++..|+....+
T Consensus 134 -------~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 134 -------VSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp -------CCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred -------CCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 111112335667888899999999765443
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=79.10 E-value=2.5 Score=45.28 Aligned_cols=29 Identities=31% Similarity=0.407 Sum_probs=24.4
Q ss_pred ceecCCCCCceec------CCCCceeeCccccccc
Q 041249 406 TTHCDLKPSNILL------DEEMVSHVGDFGLARF 434 (789)
Q Consensus 406 ivH~dlk~~Nill------~~~~~~kl~Dfgla~~ 434 (789)
++|+|+.+.||++ +++..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4566789999988764
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=74.58 E-value=0.45 Score=52.31 Aligned_cols=61 Identities=7% Similarity=0.020 Sum_probs=17.2
Q ss_pred CCCcccccCCccEEEEEEcCCceEEEE------EEecccc--chhhHHHHHHHHHHhcCCCCccceeeeeec
Q 041249 274 SANLIGTGSFGSVYKGVLDEGRTTVTV------KVFNLHH--HRASRSFIAECRALRSIRHRNLVKVFTACS 337 (789)
Q Consensus 274 ~~~~ig~G~~g~Vy~~~~~~~~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 337 (789)
..+.+| ||+||+|.+.....+||| |..+... .+....+..|.+++..+.|||+++..++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345666 999999999865578888 7665432 223356888999999999999999877653
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=68.20 E-value=14 Score=30.63 Aligned_cols=45 Identities=18% Similarity=0.104 Sum_probs=23.8
Q ss_pred CCCCCCcccCCCCCCcEEEccCCCCCccCCcCCCCCCCCCEEEccC
Q 041249 639 LMGKIPSDFGSLSKIEVLSLGFNNLIGSIPPPLGNLSSLRKISLAI 684 (789)
Q Consensus 639 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 684 (789)
++.+...+|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344445555555555555433 4445555555555555555544
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=67.94 E-value=13 Score=30.85 Aligned_cols=49 Identities=16% Similarity=0.076 Sum_probs=34.4
Q ss_pred CCCCCccCCcCCCCCCCCCEEEccCCcCCccCCccccCCCCCCeeeccCc
Q 041249 660 FNNLIGSIPPPLGNLSSLRKISLAINNLAGSIPFTLSKLKNLVILYLGVN 709 (789)
Q Consensus 660 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 709 (789)
+..++.+...+|.++.+|+.+.|-.+ ++.+-..+|.+|.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34566667777888888888877765 44466677788888887777654
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=62.60 E-value=7.5 Score=26.73 Aligned_cols=24 Identities=25% Similarity=0.607 Sum_probs=9.2
Q ss_pred eehhhHHHHHHHHHHHHHHHHHHHh
Q 041249 219 VIAIVSGLMGLALTLSISFLCWVRK 243 (789)
Q Consensus 219 ~v~~~~~~~~v~~~~~~~~~~~~~~ 243 (789)
+++.++++. +++++++.+.+|.|+
T Consensus 14 Ia~~vVGvl-l~vi~~l~~~~~~RR 37 (44)
T 2jwa_A 14 IISAVVGIL-LVVVLGVVFGILIKR 37 (44)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHH-HHHHHHHHHHhheeh
Confidence 334444433 333333333333333
No 455
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=61.42 E-value=8.8 Score=36.95 Aligned_cols=83 Identities=18% Similarity=0.207 Sum_probs=60.4
Q ss_pred CCCHHHHHHHHHHHHHHHh-hhhcCCCCCceecCCCCCceecCCCCceeeCcccccccCCCCCCccceeeecccccccCc
Q 041249 378 NLNLLQRLNIAIDVASALD-YLHHDCQPITTHCDLKPSNILLDEEMVSHVGDFGLARFLPPTHVQTSSIGVKGSIGYIAP 456 (789)
Q Consensus 378 ~l~~~~~~~i~~~ia~gL~-~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aP 456 (789)
.++...+++++..++.-.. ++++ -+|--+.|+|++++.++.+++.-.|.-..++|-..
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~lpP~e~---------------- 139 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHVGVKESLPPDEW---------------- 139 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCCEETTTBSSCSC----------------
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEcCCcccCCCCCC----------------
Confidence 4678899999999999888 6654 47888999999999999999998887554433321
Q ss_pred ccCCCCCcCccccchhhHHHHHHHHHhcCCCCc
Q 041249 457 EYGLGSEVSTNGDVYSYGILMLELIIRKKPSDI 489 (789)
Q Consensus 457 E~~~~~~~~~k~DV~sfGvvl~elltG~~P~~~ 489 (789)
++.-=.-.+=+++..++.++..|+.
T Consensus 140 --------~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 140 --------DDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp --------CHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred --------CHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 1111122556777788888888763
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=48.64 E-value=12 Score=24.95 Aligned_cols=15 Identities=40% Similarity=0.359 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHH
Q 041249 228 GLALTLSISFLCWVR 242 (789)
Q Consensus 228 ~v~~~~~~~~~~~~~ 242 (789)
.+++++++++++|+|
T Consensus 23 gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 23 GAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHeec
Confidence 344455555666654
No 457
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=28.22 E-value=34 Score=24.61 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=16.1
Q ss_pred eeEeehhhHHHHHHHHHHHHHHHHHHHhccc
Q 041249 216 LKLVIAIVSGLMGLALTLSISFLCWVRKRKE 246 (789)
Q Consensus 216 ~~~~v~~~~~~~~v~~~~~~~~~~~~~~~k~ 246 (789)
|++++++++|+..+++++.+++-|..-+|++
T Consensus 10 WiIi~svl~GLLLL~Lii~~LwK~GFFKR~~ 40 (54)
T 2l8s_A 10 WVILLSAFAGLLLLMLLILALWKIGFFKRPL 40 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 5555666666655555555544443334443
No 458
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=24.33 E-value=86 Score=19.95 Aligned_cols=22 Identities=32% Similarity=0.664 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 041249 224 SGLMGLALTLSISFLCWVRKRK 245 (789)
Q Consensus 224 ~~~~~v~~~~~~~~~~~~~~~k 245 (789)
+++++++.+...-|..|+.+|.
T Consensus 14 ~gl~vif~~lg~tflywrgrrh 35 (40)
T 2l9u_A 14 AGLVVIFMMLGGTFLYWRGRRH 35 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCceeEEEccccc
Confidence 3343444444445667776553
No 459
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=21.98 E-value=19 Score=23.37 Aligned_cols=8 Identities=13% Similarity=-0.039 Sum_probs=4.0
Q ss_pred HHHHHHHh
Q 041249 236 SFLCWVRK 243 (789)
Q Consensus 236 ~~~~~~~~ 243 (789)
++++++|+
T Consensus 27 ~~~~iRRr 34 (35)
T 1iij_A 27 VGILIKRR 34 (35)
T ss_dssp TTHHHHHC
T ss_pred hheEEeec
Confidence 44455554
No 460
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=20.06 E-value=51 Score=23.75 Aligned_cols=30 Identities=17% Similarity=0.268 Sum_probs=15.5
Q ss_pred eeEeehhhHHHHHHHHHHHHHHHHHHHhcc
Q 041249 216 LKLVIAIVSGLMGLALTLSISFLCWVRKRK 245 (789)
Q Consensus 216 ~~~~v~~~~~~~~v~~~~~~~~~~~~~~~k 245 (789)
|.+++++++|+..+++++.+++-|..-+|+
T Consensus 13 wiIi~svl~GLllL~li~~~LwK~GFFkR~ 42 (54)
T 2knc_A 13 WWVLVGVLGGLLLLTILVLAMWKVGFFKRN 42 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 555666666665555555554444333333
Done!