Query 041251
Match_columns 213
No_of_seqs 157 out of 1159
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 05:16:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041251.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041251hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1443 Predicted integral mem 99.9 2.7E-25 5.9E-30 193.3 10.2 146 63-212 7-153 (349)
2 KOG1441 Glucose-6-phosphate/ph 99.9 3.6E-25 7.9E-30 196.0 8.8 143 66-213 11-153 (316)
3 PTZ00343 triose or hexose phos 99.9 2.9E-23 6.3E-28 186.5 16.4 138 69-213 46-184 (350)
4 TIGR00817 tpt Tpt phosphate/ph 99.9 3.8E-21 8.1E-26 168.5 13.2 134 71-212 1-134 (302)
5 KOG1444 Nucleotide-sugar trans 99.8 6.2E-19 1.3E-23 154.6 12.0 137 68-212 8-146 (314)
6 KOG1442 GDP-fucose transporter 99.7 1.7E-17 3.6E-22 143.1 1.2 151 61-212 17-171 (347)
7 PF08449 UAA: UAA transporter 99.6 2E-14 4.3E-19 126.6 11.5 126 81-213 9-134 (303)
8 COG5070 VRG4 Nucleotide-sugar 99.4 1.3E-12 2.9E-17 110.3 7.4 124 77-209 11-134 (309)
9 KOG1580 UDP-galactose transpor 99.0 2.7E-10 5.9E-15 97.1 3.1 108 99-212 47-154 (337)
10 KOG1581 UDP-galactose transpor 99.0 1.1E-08 2.4E-13 89.8 12.7 141 66-212 8-152 (327)
11 PF00892 EamA: EamA-like trans 99.0 3.4E-09 7.3E-14 79.4 8.0 118 86-212 5-123 (126)
12 KOG1582 UDP-galactose transpor 98.8 1.3E-08 2.9E-13 88.4 6.0 134 68-211 39-174 (367)
13 PF06027 DUF914: Eukaryotic pr 98.7 2.9E-07 6.2E-12 82.8 12.8 141 67-212 8-148 (334)
14 TIGR00688 rarD rarD protein. T 98.6 6.9E-07 1.5E-11 76.4 12.0 121 86-212 16-139 (256)
15 TIGR00950 2A78 Carboxylate/Ami 98.5 6.4E-07 1.4E-11 76.1 10.1 113 87-212 4-116 (260)
16 PLN00411 nodulin MtN21 family 98.5 1.6E-06 3.5E-11 78.6 12.7 125 82-212 23-153 (358)
17 PRK15430 putative chlorampheni 98.5 2.8E-06 6.1E-11 74.5 12.8 126 78-212 15-142 (296)
18 PRK11272 putative DMT superfam 98.5 3.9E-06 8.6E-11 73.4 13.5 127 73-212 10-138 (292)
19 PF13536 EmrE: Multidrug resis 98.4 9.9E-07 2.2E-11 66.8 7.2 66 146-212 37-103 (113)
20 PRK11689 aromatic amino acid e 98.2 3.5E-05 7.6E-10 67.5 12.8 120 78-212 11-134 (295)
21 TIGR00950 2A78 Carboxylate/Ami 98.2 8.8E-05 1.9E-09 62.9 14.7 119 86-211 142-260 (260)
22 PLN00411 nodulin MtN21 family 98.1 5.6E-05 1.2E-09 68.6 12.3 119 88-212 205-325 (358)
23 COG2510 Predicted membrane pro 98.0 7.5E-05 1.6E-09 58.4 10.2 120 86-212 17-136 (140)
24 PRK11453 O-acetylserine/cystei 98.0 0.00011 2.4E-09 64.5 11.9 118 77-212 10-129 (299)
25 PF04142 Nuc_sug_transp: Nucle 97.9 1.8E-05 4E-10 68.2 6.0 74 138-212 13-86 (244)
26 PRK15051 4-amino-4-deoxy-L-ara 97.8 9.2E-05 2E-09 56.4 7.9 62 151-212 45-106 (111)
27 TIGR03340 phn_DUF6 phosphonate 97.8 0.00028 6E-09 61.3 11.6 72 141-212 61-132 (281)
28 PRK11272 putative DMT superfam 97.8 0.00057 1.2E-08 59.7 12.9 105 105-212 177-282 (292)
29 KOG1583 UDP-N-acetylglucosamin 97.8 2.7E-06 5.8E-11 74.3 -1.9 100 106-213 34-135 (330)
30 KOG2765 Predicted membrane pro 97.7 8.3E-05 1.8E-09 67.4 6.6 76 137-212 153-228 (416)
31 COG0697 RhaT Permeases of the 97.7 0.0015 3.2E-08 55.4 13.8 70 143-212 70-140 (292)
32 PF03151 TPT: Triose-phosphate 97.6 0.003 6.5E-08 49.3 13.3 131 81-212 9-150 (153)
33 PRK10532 threonine and homoser 97.5 0.0021 4.6E-08 56.2 12.2 104 90-211 30-133 (293)
34 PRK10532 threonine and homoser 97.3 0.0051 1.1E-07 53.8 12.9 63 150-212 216-278 (293)
35 PRK11453 O-acetylserine/cystei 97.3 0.0057 1.2E-07 53.6 13.1 76 137-212 209-284 (299)
36 TIGR03340 phn_DUF6 phosphonate 97.2 0.001 2.2E-08 57.8 7.3 71 142-212 210-280 (281)
37 TIGR00817 tpt Tpt phosphate/ph 97.2 0.0023 4.9E-08 56.0 9.3 123 86-212 159-290 (302)
38 PRK11689 aromatic amino acid e 97.2 0.0083 1.8E-07 52.5 12.5 76 136-212 209-284 (295)
39 KOG2234 Predicted UDP-galactos 97.0 0.015 3.3E-07 52.4 12.1 139 71-212 15-161 (345)
40 KOG3912 Predicted integral mem 96.9 0.0042 9.1E-08 54.8 8.1 129 81-212 12-155 (372)
41 PTZ00343 triose or hexose phos 96.9 0.025 5.3E-07 51.1 13.1 63 150-212 283-345 (350)
42 PRK10452 multidrug efflux syst 96.7 0.0033 7.2E-08 48.7 5.0 67 146-212 33-100 (120)
43 PRK15430 putative chlorampheni 96.6 0.045 9.7E-07 47.9 12.4 66 146-211 216-281 (296)
44 PRK02971 4-amino-4-deoxy-L-ara 96.5 0.006 1.3E-07 47.7 5.3 67 146-212 51-119 (129)
45 PRK09541 emrE multidrug efflux 96.4 0.01 2.3E-07 45.1 6.2 65 148-212 35-100 (110)
46 TIGR00776 RhaT RhaT L-rhamnose 96.2 0.064 1.4E-06 47.1 11.1 67 146-212 62-133 (290)
47 COG0697 RhaT Permeases of the 96.2 0.15 3.2E-06 43.0 13.0 75 137-212 209-284 (292)
48 PRK11431 multidrug efflux syst 96.2 0.018 3.9E-07 43.5 6.4 66 147-212 33-99 (105)
49 PRK10650 multidrug efflux syst 96.2 0.033 7.1E-07 42.4 7.8 66 147-212 39-105 (109)
50 KOG2766 Predicted membrane pro 96.2 0.0037 8.1E-08 54.5 2.9 135 67-212 13-147 (336)
51 TIGR00776 RhaT RhaT L-rhamnose 96.1 0.081 1.8E-06 46.4 11.1 66 147-212 215-285 (290)
52 KOG4510 Permease of the drug/m 96.0 0.0013 2.9E-08 57.5 -0.6 63 150-212 104-166 (346)
53 TIGR00803 nst UDP-galactose tr 95.9 0.2 4.4E-06 41.8 12.3 67 146-212 155-221 (222)
54 COG2076 EmrE Membrane transpor 95.8 0.027 5.8E-07 42.7 5.5 65 147-211 34-99 (106)
55 PF08449 UAA: UAA transporter 95.4 0.34 7.3E-06 42.6 12.1 135 73-211 155-293 (303)
56 PF10639 UPF0546: Uncharacteri 95.3 0.043 9.4E-07 42.0 5.2 69 143-212 42-111 (113)
57 PF00893 Multi_Drug_Res: Small 94.5 0.084 1.8E-06 38.7 4.9 57 150-206 36-93 (93)
58 PF06027 DUF914: Eukaryotic pr 93.9 0.88 1.9E-05 41.2 11.1 58 155-212 245-302 (334)
59 PF05653 Mg_trans_NIPA: Magnes 93.6 0.13 2.8E-06 45.7 5.1 67 146-212 53-119 (300)
60 KOG4314 Predicted carbohydrate 92.6 0.02 4.3E-07 48.4 -1.4 77 136-212 46-122 (290)
61 PF04142 Nuc_sug_transp: Nucle 92.4 6.5 0.00014 33.8 15.0 131 70-205 112-243 (244)
62 COG2962 RarD Predicted permeas 92.1 2.5 5.5E-05 37.5 11.0 126 74-211 10-140 (293)
63 COG2962 RarD Predicted permeas 90.5 7.3 0.00016 34.6 12.3 69 143-211 211-279 (293)
64 PF09930 DUF2162: Predicted tr 88.5 8.5 0.00018 32.9 10.9 75 135-209 94-171 (224)
65 PF06800 Sugar_transport: Suga 87.6 8.9 0.00019 33.7 10.8 66 147-212 199-268 (269)
66 COG5006 rhtA Threonine/homoser 87.0 3.3 7.3E-05 36.3 7.6 57 154-210 221-277 (292)
67 KOG2765 Predicted membrane pro 86.8 4.4 9.5E-05 37.4 8.5 126 86-212 261-387 (416)
68 PF04657 DUF606: Protein of un 79.3 28 0.00061 27.2 11.6 118 86-212 15-138 (138)
69 KOG2922 Uncharacterized conser 77.3 3.9 8.4E-05 36.9 4.5 65 147-211 68-132 (335)
70 COG5006 rhtA Threonine/homoser 68.8 83 0.0018 27.8 11.1 101 70-187 15-115 (292)
71 KOG2262 Sexual differentiation 66.9 22 0.00049 35.2 7.2 63 44-114 46-110 (761)
72 KOG1441 Glucose-6-phosphate/ph 64.2 12 0.00027 33.6 4.7 137 74-211 165-303 (316)
73 PF13937 DUF4212: Domain of un 61.9 57 0.0012 23.4 7.4 52 64-115 4-57 (81)
74 PF03303 WTF: WTF protein; In 61.1 1.1E+02 0.0024 26.5 14.3 52 70-125 88-143 (247)
75 PF08627 CRT-like: CRT-like; 58.2 62 0.0014 25.3 7.0 43 68-113 53-95 (130)
76 TIGR00688 rarD rarD protein. T 54.1 1.3E+02 0.0028 25.2 11.8 48 143-190 208-255 (256)
77 PF06800 Sugar_transport: Suga 51.6 44 0.00095 29.4 5.9 70 143-212 45-119 (269)
78 KOG1444 Nucleotide-sugar trans 48.3 93 0.002 28.0 7.5 134 73-211 158-296 (314)
79 COG5070 VRG4 Nucleotide-sugar 47.2 21 0.00046 31.0 3.2 67 141-207 222-288 (309)
80 KOG4831 Unnamed protein [Funct 46.0 17 0.00036 27.8 2.1 69 143-212 53-122 (125)
81 COG4420 Predicted membrane pro 45.9 92 0.002 26.0 6.6 36 67-110 58-93 (191)
82 KOG4510 Permease of the drug/m 38.3 1.2E+02 0.0026 27.2 6.5 63 147-209 257-319 (346)
83 PF06210 DUF1003: Protein of u 37.9 1.1E+02 0.0024 23.0 5.6 16 70-85 7-22 (108)
84 COG4327 Predicted membrane pro 36.4 50 0.0011 24.5 3.3 48 61-108 8-56 (101)
85 KOG2234 Predicted UDP-galactos 28.8 4.6E+02 0.0099 24.0 11.7 126 76-209 187-316 (345)
86 TIGR03647 Na_symport_sm probab 28.1 2.2E+02 0.0048 20.2 6.4 44 72-115 9-53 (77)
87 KOG3747 Concentrative Na+-nucl 24.9 6.5E+02 0.014 24.5 10.0 32 171-202 176-209 (602)
88 COG3274 Predicted O-acyltransf 24.0 2.6E+02 0.0055 25.5 6.2 60 135-194 3-69 (332)
89 COG2510 Predicted membrane pro 22.2 3.7E+02 0.0079 21.4 6.1 51 143-193 5-55 (140)
90 PRK07668 hypothetical protein; 20.6 5.7E+02 0.012 22.3 11.1 9 88-96 126-134 (254)
No 1
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.92 E-value=2.7e-25 Score=193.28 Aligned_cols=146 Identities=34% Similarity=0.582 Sum_probs=132.8
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcc-cccccchHH
Q 041251 63 SVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQ-HTVSMSWRD 141 (213)
Q Consensus 63 ~~~~~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~ 141 (213)
.+-.+.+...+++.++.||++|+++.++|||.-. .|+||++++.+|+++.++++.+.++...++.. .+.+.+|++
T Consensus 7 ~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~----~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~ 82 (349)
T KOG1443|consen 7 DNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTK----NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRD 82 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc----CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHH
Confidence 4456777888888999999999999999999865 79999999999999999999988777643322 356889999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 142 YYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 142 ~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
|+|+++|++++.+.+++++|||++|+++|+|+|+||.+++|+++++.+|+.|++++...+.+++|.+|+++
T Consensus 83 ~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glfl 153 (349)
T KOG1443|consen 83 YLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFL 153 (349)
T ss_pred HHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999986
No 2
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.92 E-value=3.6e-25 Score=195.96 Aligned_cols=143 Identities=21% Similarity=0.304 Sum_probs=128.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHH
Q 041251 66 SAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVR 145 (213)
Q Consensus 66 ~~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 145 (213)
..++.+....++..|+++|++.+++||++++. ++||||++++++|+.++++...++.. .+..+..+++.+.+++.
T Consensus 11 ~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~--~~f~~p~~lt~~~~~~~~l~~~v~~~---l~~~~~~~~~~~~~~~~ 85 (316)
T KOG1441|consen 11 QLKKILRIGIAFAIWYVLSVGVIILNKYILSK--YGFPFPITLTMLHLFCGALALLVIKV---LKLVPPSKISSKLPLRT 85 (316)
T ss_pred ccchhHHHHHHHHHHhhhheeeEEeeHhhhcc--CCCCCccHHHHHHHHHHHHHHHHHHH---hcCCCCCccccccchHH
Confidence 34478899999999999999999999999996 79999999999988887765544433 35666666666788999
Q ss_pred HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEeC
Q 041251 146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS 213 (213)
Q Consensus 146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~lA 213 (213)
++|+|++++++++++|.|+.++||||+|++|+++|++++++++++.+|+++..+++++++|+.||++|
T Consensus 86 llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ia 153 (316)
T KOG1441|consen 86 LLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIA 153 (316)
T ss_pred HHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999986
No 3
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.91 E-value=2.9e-23 Score=186.53 Aligned_cols=138 Identities=19% Similarity=0.282 Sum_probs=122.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc-hHHHHHHHH
Q 041251 69 DVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMS-WRDYYVRVV 147 (213)
Q Consensus 69 ~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~vl 147 (213)
..+++.+++++||++|+..+++||++++ .||||++++++|++++++++.++.. .+.++.++++ ++.+++.++
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~----~~~~P~~l~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~ll 118 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALN----MLPLPWTISSLQLFVGWLFALLYWA---TGFRKIPRIKSLKLFLKNFL 118 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHHHHHHHHHH---hCCCCCCCCCCHHHHHHHHH
Confidence 4789999999999999999999999998 6899999999999999887655432 2333434443 566789999
Q ss_pred HHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEeC
Q 041251 148 PTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS 213 (213)
Q Consensus 148 P~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~lA 213 (213)
|+|+++...+...|.|+++++++++|++|+++|++++++++++++||++++++++++++++|++++
T Consensus 119 p~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~ 184 (350)
T PTZ00343 119 PQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALA 184 (350)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhe
Confidence 999999999999999999999999999999999999999999999999999999999999999874
No 4
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.86 E-value=3.8e-21 Score=168.52 Aligned_cols=134 Identities=22% Similarity=0.360 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHH
Q 041251 71 LKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTG 150 (213)
Q Consensus 71 l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~s 150 (213)
+++.+++++||+.|++++++||++++ .|++|+++++.|++++++++.+... .+.++.++++++ .++.++|++
T Consensus 1 ~~~~~~~~~w~~~~~~~~~~NK~~l~----~~~~P~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~g 72 (302)
T TIGR00817 1 LQTGLLFGLWYFLNVYFNIYNKKLLN----VFPYPYFKTLISLAVGSLYCLLSWS---SGLPKRLKISSA-LLKLLLPVA 72 (302)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHh----hCChhHHHHHHHHHHHHHHHHHHHH---hCCCCCCCCCHH-HHHHHHHHH
Confidence 46788999999999999999999998 5899999999999998877665522 123344456665 578899999
Q ss_pred HHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 151 LATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 151 l~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+++++++.+.|.|++|++++++|++|+++|++++++++++++||++.+.+++++++++|+++
T Consensus 73 ~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l 134 (302)
T TIGR00817 73 IVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVAL 134 (302)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999875
No 5
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.79 E-value=6.2e-19 Score=154.61 Aligned_cols=137 Identities=17% Similarity=0.185 Sum_probs=118.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHH--HHHHHHHHHHHHHHHHHhcCcccccccchHHHHHH
Q 041251 68 ADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNT--VHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVR 145 (213)
Q Consensus 68 ~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~--~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 145 (213)
++..+.+...+.|+.+|+.+++.||++++. ++||..++. .|++++.+...++.+ .|..+.++++|+ ..|+
T Consensus 8 ~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~----y~f~~~l~l~~~Q~l~s~~~v~~lk~---~~lv~~~~l~~~-~~kk 79 (314)
T KOG1444|consen 8 KKQSSPLLSALFYCLSSILMTVVNKIVLSS----YNFPMGLLLMLLQSLASVLVVLVLKR---LGLVNFRPLDLR-TAKK 79 (314)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHhc----CCCcHHHHHHHHHHHHHHHHHHHHHH---hceeecCCcChH-HHHH
Confidence 334555667889999999999999999994 555555555 999998887776654 467788889996 5899
Q ss_pred HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++|++++|.+++.++..+++|++|++++++|..+|+++++.|.++++++++.++++++..+.+|...
T Consensus 80 ~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~ 146 (314)
T KOG1444|consen 80 WFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVA 146 (314)
T ss_pred HccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999988654
No 6
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.66 E-value=1.7e-17 Score=143.12 Aligned_cols=151 Identities=17% Similarity=0.237 Sum_probs=130.9
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHh-c-Cc--ccccc
Q 041251 61 TKSVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWS-H-RF--QHTVS 136 (213)
Q Consensus 61 ~~~~~~~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~-~-~~--~~~~~ 136 (213)
++.++-.++..+.......|..+|+++++.||++++.......-|+|+++.|++++..+|..+.+... . .. .+.-+
T Consensus 17 ~e~~~l~~n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ 96 (347)
T KOG1442|consen 17 EEMPVLEANAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQ 96 (347)
T ss_pred hhhHHHHHhhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCccc
Confidence 35667788888888889999999999999999999976667888999999999999998887765421 1 11 13334
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 137 MSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 137 ~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++. +..+.++|+++.+.++|.+.|.+|+|++|+||++-|+++.+|+++++|++.+++.+.....++++|++|..+
T Consensus 97 ldl-~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l 171 (347)
T KOG1442|consen 97 LDL-ATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL 171 (347)
T ss_pred ccH-HHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee
Confidence 666 468899999999999999999999999999999999999999999999999999999999999999999765
No 7
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.57 E-value=2e-14 Score=126.56 Aligned_cols=126 Identities=19% Similarity=0.257 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHh
Q 041251 81 YTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLS 160 (213)
Q Consensus 81 ~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~ 160 (213)
+.+-.+..++++++.... +..+||++++++|++++++.+.+....+ +.++.++ ..++..++.++++.++..++
T Consensus 9 ~~~~~~~g~~qE~i~~~~-~~~~~~~~lt~~q~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 81 (303)
T PF08449_consen 9 FGGCCSYGILQEKIMTTP-YGSPFPLFLTFVQFAFNALFSFILLSLF--KFPKSRK----IPLKKYAILSFLFFLASVLS 81 (303)
T ss_pred HHHHHHHHHHHHHHHcCC-CCCcccHHHHHHHHHHHHHHHHHHHHhc--cccCCCc----ChHHHHHHHHHHHHHHHHHH
Confidence 333346667788887754 2336899999999999888877765433 2112222 23566788999999999999
Q ss_pred hhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEeC
Q 041251 161 NESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS 213 (213)
Q Consensus 161 n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~lA 213 (213)
|.|++|+|+|++++.|++.|++++++++++.+||++.+.+++++++++|++++
T Consensus 82 ~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~ 134 (303)
T PF08449_consen 82 NAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIF 134 (303)
T ss_pred HHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHhee
Confidence 99999999999999999999999999999999999999999999999999763
No 8
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.37 E-value=1.3e-12 Score=110.32 Aligned_cols=124 Identities=18% Similarity=0.183 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHH
Q 041251 77 ILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALD 156 (213)
Q Consensus 77 i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~ 156 (213)
++.|+.+|+.+++.||++++.. +|+..+.+.++|-++|.+...++.......+| .+ + .+.|+|++++...+
T Consensus 11 ~lsYc~sSIlmTltNKyVls~~--gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR----~t--~-aK~WfpiSfLLv~M 81 (309)
T COG5070 11 SLSYCFSSILMTLTNKYVLSNL--GFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR----LT--K-AKKWFPISFLLVVM 81 (309)
T ss_pred HHHHHHHHHHHHHhhHheecCC--CCchhhHHHHHHHHHHHHHHHHHHHHhHhhee----hh--h-hhhhcCHHHHHHHH
Confidence 6789999999999999999975 66667888899999988877776544222222 22 2 77889999999999
Q ss_pred HHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeee
Q 041251 157 VNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIG 209 (213)
Q Consensus 157 i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~G 209 (213)
+..+..||+|++||.|++.|.++.+.++..+.++++.+.+-..+.+.++++..
T Consensus 82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlS 134 (309)
T COG5070 82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLS 134 (309)
T ss_pred HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988888888777643
No 9
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.97 E-value=2.7e-10 Score=97.12 Aligned_cols=108 Identities=16% Similarity=0.250 Sum_probs=90.7
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhh
Q 041251 99 MGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSA 178 (213)
Q Consensus 99 ~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~ 178 (213)
..+|.|.+.|.++|+.+..+.+.++.... +..+++. .-.+.-+.+++.|.+.++.+|.|++|+|.|...+-||.
T Consensus 47 ~E~FTfalaLVf~qC~~N~vfAkvl~~ir-----~~~~~D~-t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKSc 120 (337)
T KOG1580|consen 47 IEKFTFALALVFFQCTANTVFAKVLFLIR-----KKTEIDN-TPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSC 120 (337)
T ss_pred hheehHHHHHHHHHHHHHHHHHHhheeec-----ccccccC-CcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccC
Confidence 45899999999999999999998765432 2222221 01223356899999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 179 SPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 179 tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
.|+-++++++++.++.++|+.+++++.|+.||++
T Consensus 121 KPIPVMilGVl~~~KsY~w~kY~cVL~IV~GVal 154 (337)
T KOG1580|consen 121 KPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVAL 154 (337)
T ss_pred CCcceeeeehhhhcccccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999975
No 10
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.96 E-value=1.1e-08 Score=89.84 Aligned_cols=141 Identities=16% Similarity=0.185 Sum_probs=111.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHH
Q 041251 66 SAADVLKTLFLILMWYTFSTFLTLYNKTLLG----DDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRD 141 (213)
Q Consensus 66 ~~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~----~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 141 (213)
..++....++++.--+.+=+...++...+.+ .++.+|..|.|+..+|-+++.+++.+....|... ...+-+|
T Consensus 8 ~~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~--~~~~apl-- 83 (327)
T KOG1581|consen 8 MANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKE--LSGVAPL-- 83 (327)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccccc--CCCCCch--
Confidence 3556666666655555555566677766643 2456899999999999999988887766655322 2222233
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 142 YYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 142 ~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
....-+++....+-.++-.||+|+|.|.+.++|++..+.++++..+++++|++...+++..+|..||.+
T Consensus 84 --~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~Gvsi 152 (327)
T KOG1581|consen 84 --YKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSI 152 (327)
T ss_pred --hHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheee
Confidence 334558899999999999999999999999999999999999999999999999999999999999975
No 11
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.95 E-value=3.4e-09 Score=79.45 Aligned_cols=118 Identities=27% Similarity=0.387 Sum_probs=92.2
Q ss_pred HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHH-HHHHHHHhhhhc
Q 041251 86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLA-TALDVNLSNESL 164 (213)
Q Consensus 86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~-~~~~i~~~n~sL 164 (213)
....++|...+ +++ |...+.++++++.+ ..++.... +..+....+++++. ..+..+++ ..++..+.+.++
T Consensus 5 ~~~~~~k~~~~----~~~-~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~ 75 (126)
T PF00892_consen 5 IYSVFSKKLLK----KIS-PLSITFWRFLIAGI-LLILLLIL--GRKPFKNLSPRQWL-WLLFLGLLGTALAYLLYFYAL 75 (126)
T ss_pred eHHHHHHHHhc----cCC-HHHHHHHHHHHHHH-HHHHHHhh--ccccccCCChhhhh-hhhHhhccceehHHHHHHHHH
Confidence 45678888887 467 88888999998776 43333322 11122345555544 44555555 799999999999
Q ss_pred ccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 165 VFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 165 ~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++.+++..+++..+.|++++++++++.+|+++++.+++++++++|+.+
T Consensus 76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l 123 (126)
T PF00892_consen 76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVL 123 (126)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999864
No 12
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.76 E-value=1.3e-08 Score=88.36 Aligned_cols=134 Identities=13% Similarity=0.176 Sum_probs=105.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc-chHHHHHHHHHHHHHHHHHHHHHHhcCcc-cccccchHHHHHH
Q 041251 68 ADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFP-APLLMNTVHFSMQAILSKAIIWFWSHRFQ-HTVSMSWRDYYVR 145 (213)
Q Consensus 68 ~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp-~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~ 145 (213)
.|..+.+.+++..++.-+..-....++++.+ +|+ |-+.+|.+|+++=.....+-++ .++ ++..++||.|.+
T Consensus 39 pkw~QFlic~~g~Ff~Yl~yGy~qElif~~~--gfkp~GWylTlvQf~~Ysg~glie~~----~~~~k~r~iP~rtY~~- 111 (367)
T KOG1582|consen 39 PKWTQFLICSAGVFFLYLVYGYLQELIFNVE--GFKPFGWYLTLVQFLVYSGFGLIELQ----LIQTKRRVIPWRTYVI- 111 (367)
T ss_pred chhhhHHHHHhHHHHHHHHHHHHHHHHhccc--cCcccchHHHHHHHHHHHhhhheEEE----eecccceecchhHhhh-
Confidence 3456666666666677777778889999875 554 8999999999974333222111 122 234567877654
Q ss_pred HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251 146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL 211 (213)
Q Consensus 146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~ 211 (213)
++++..++++++|-|+.|++.|...+.|++.-+-+++.+.++.++|+.+..+.+..+++.|.+
T Consensus 112 ---la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli 174 (367)
T KOG1582|consen 112 ---LAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLI 174 (367)
T ss_pred ---hHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999999999888864
No 13
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.69 E-value=2.9e-07 Score=82.79 Aligned_cols=141 Identities=16% Similarity=0.162 Sum_probs=95.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHH
Q 041251 67 AADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRV 146 (213)
Q Consensus 67 ~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~v 146 (213)
.++.++.++..=+--++..++...+..+-+. ++..|.+-+.+.++..+++-... ..++.+.++..+.-++++++.
T Consensus 8 ~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~---~~~~P~~Qs~~~Y~~l~~vy~~~-~~~r~~~~~~~~~~~~~~w~y- 82 (334)
T PF06027_consen 8 TRRFWIVLLLGQVLSLCITGTGTFSSLLANK---GVNIPTFQSFFNYVLLALVYTPI-LLYRRGFKKWLKVLKRPWWKY- 82 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc---CccCcHHHHHHHHHHHHHHHhhh-hhhccccccchhhcchhHHHH-
Confidence 3444444443322233344555556665542 57778888877776533322211 122112112112223344444
Q ss_pred HHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 147 VPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+.++++-..++.+.+.|++|.+++-.|++..++.+|+++++++++++|+++..++++++.++|+++
T Consensus 83 ~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~l 148 (334)
T PF06027_consen 83 FLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVL 148 (334)
T ss_pred HHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhh
Confidence 446899999999999999999999999999999999999999999999999999999999999764
No 14
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.60 E-value=6.9e-07 Score=76.39 Aligned_cols=121 Identities=14% Similarity=0.108 Sum_probs=88.0
Q ss_pred HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcc--cc-cccchHHHHHHHHHHHHHHHHHHHHhhh
Q 041251 86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQ--HT-VSMSWRDYYVRVVPTGLATALDVNLSNE 162 (213)
Q Consensus 86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~--~~-~~~~~~~~~~~vlP~sl~~~~~i~~~n~ 162 (213)
....+-|. +. +.+ |..+...++++++++..+.......+.. +. ++.++++......-.+++.++...+-..
T Consensus 16 ~~~~~~k~-~~----~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (256)
T TIGR00688 16 YMYYYSKL-LK----PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIW 89 (256)
T ss_pred HHHHHHHH-hc----cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 44456777 33 356 8999999999877654443322211110 11 1112222233355567778888899999
Q ss_pred hcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 163 SLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 163 sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
|+++.+++-.+++-.++|++++++++++++||++.+.++++++...|+++
T Consensus 90 a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~l 139 (256)
T TIGR00688 90 AVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVIS 139 (256)
T ss_pred HHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999753
No 15
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.54 E-value=6.4e-07 Score=76.09 Aligned_cols=113 Identities=12% Similarity=0.092 Sum_probs=88.3
Q ss_pred HHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 041251 87 LTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVF 166 (213)
Q Consensus 87 ~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~ 166 (213)
.....|+.++. ..| |..+...+++++.++.....+ . + .+.+++.+..+..++++.+...+...|++|
T Consensus 4 ~~~~~k~~~~~---~~~-~~~~~~~r~~~~~l~l~~~~~-~--~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~ 70 (260)
T TIGR00950 4 TGVVIGQYLEG---QVP-LYFAVFRRLIFALLLLLPLLR-R--R------PPLKRLLRLLLLGALQIGVFYVLYFVAVKR 70 (260)
T ss_pred hHHHHHHHHhc---CCC-HHHHHHHHHHHHHHHHHHHHH-h--c------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44668888873 344 788888888876665544322 1 2 123344555566667788899999999999
Q ss_pred chHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 167 ISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 167 vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++.+..+++.++.|+++++++.++.+||++++.+.++++.+.|+.+
T Consensus 71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~l 116 (260)
T TIGR00950 71 LPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVL 116 (260)
T ss_pred cChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999999999754
No 16
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.52 E-value=1.6e-06 Score=78.64 Aligned_cols=125 Identities=15% Similarity=0.144 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHhh
Q 041251 82 TFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSN 161 (213)
Q Consensus 82 ~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n 161 (213)
+...++..+-|..++. +.+ |..+.++++.+++++...+.... .+.++.++.+|++ +..+..++++......+.+
T Consensus 23 ~~~~~~~~~~k~a~~~---G~~-~~~~~~~R~~iA~l~Ll~~~~~~-~~~~~~~~~~~~~-~~~l~l~g~~g~~~~~~~~ 96 (358)
T PLN00411 23 TSVVGISTLFKVATSK---GLN-IYPFLGYSYLLASLLLLPSLFFT-NRSRSLPPLSVSI-LSKIGLLGFLGSMYVITGY 96 (358)
T ss_pred HHHHHHHHHHHHHHHC---CCC-ccHHHHHHHHHHHHHHHHHHHHH-HHhcccCcchHHH-HHHHHHHHHHHHHHHHHHH
Confidence 4445778888999874 566 77788999998776665543322 1112223345655 4445556666555666889
Q ss_pred hhcccchHhHHHHHhhhhhHHHHHHHHHh------hccCCChhHHHhhhheeeeeEe
Q 041251 162 ESLVFISVTFATMCKSASPIFLLVFAFAF------RLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 162 ~sL~~vsVsf~q~iKs~tPifv~ll~~l~------~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++++|.|.+...++-++.|++++++++++ ++||.+.+.++++++.+.|+.+
T Consensus 97 ~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~l 153 (358)
T PLN00411 97 IGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALV 153 (358)
T ss_pred HHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 5999999999999998888753
No 17
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.48 E-value=2.8e-06 Score=74.51 Aligned_cols=126 Identities=10% Similarity=0.034 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCccc-ccc-cchHHHHHHHHHHHHHHHH
Q 041251 78 LMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQH-TVS-MSWRDYYVRVVPTGLATAL 155 (213)
Q Consensus 78 ~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~-~~~-~~~~~~~~~vlP~sl~~~~ 155 (213)
+....++..-.+. |.+ . .++ |..+.+.|++++.+....+.... .+.+. ... -++++. ...+-.+++.++
T Consensus 15 ~a~~~wg~~~~~~-k~~-~----~~~-~~~~~~~R~~~a~~~l~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 85 (296)
T PRK15430 15 AAYFIWGIAPAYF-KLI-Y----YVP-ADEILTHRVIWSFFFMVVLMSIC-RQWSYLKTLIQTPQKI-FMLAVSAVLIGG 85 (296)
T ss_pred HHHHHHHHHHHHH-HHh-c----CCC-HHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHcCHHHH-HHHHHHHHHHHH
Confidence 3334555343444 875 3 466 89999999998766443332221 11111 000 123332 223345667778
Q ss_pred HHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 156 DVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 156 ~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
...+-.+++++.|++...++-.+.|++++++++++.+||++.+.++++++...|+.+
T Consensus 86 ~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~l 142 (296)
T PRK15430 86 NWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLV 142 (296)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999864
No 18
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.47 E-value=3.9e-06 Score=73.36 Aligned_cols=127 Identities=18% Similarity=0.186 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHH
Q 041251 73 TLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLA 152 (213)
Q Consensus 73 ~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~ 152 (213)
+..++...+.|+ +...+-|..++ +.+ |..++.++++++.++..+..... + ....++++ +...+..+++
T Consensus 10 ~~~~~~~~~iWg-~~~~~~K~~~~----~~~-p~~~~~~R~~~a~l~ll~~~~~~--~---~~~~~~~~-~~~~~~~g~~ 77 (292)
T PRK11272 10 FGALFALYIIWG-STYLVIRIGVE----SWP-PLMMAGVRFLIAGILLLAFLLLR--G---HPLPTLRQ-WLNAALIGLL 77 (292)
T ss_pred HHHHHHHHHHHh-hHHHHHHHHhc----cCC-HHHHHHHHHHHHHHHHHHHHHHh--C---CCCCcHHH-HHHHHHHHHH
Confidence 344666777888 67788888876 466 99999999999776655443321 1 11123444 4444555554
Q ss_pred -HHHHHHHhhhhc-ccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 153 -TALDVNLSNESL-VFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 153 -~~~~i~~~n~sL-~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+.....+-..++ ++++.+...++-.+.|+++.+++.+ .+||++++.+.++++.+.|+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~l 138 (292)
T PRK11272 78 LLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVL 138 (292)
T ss_pred HHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHH
Confidence 455667778888 9999999999999999999999986 5899999999999999988753
No 19
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.41 E-value=9.9e-07 Score=66.83 Aligned_cols=66 Identities=26% Similarity=0.319 Sum_probs=58.0
Q ss_pred HHHHHHHHH-HHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 146 VVPTGLATA-LDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 146 vlP~sl~~~-~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++..+++.. ....+-.+|+++.+ +...++.++.|+|++++++++++||++.+.+.+++++..|+++
T Consensus 37 ~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~l 103 (113)
T PF13536_consen 37 LILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVIL 103 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 344455554 88889999999999 6888999999999999999999999999999999999999864
No 20
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.18 E-value=3.5e-05 Score=67.54 Aligned_cols=120 Identities=14% Similarity=0.102 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHH
Q 041251 78 LMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDV 157 (213)
Q Consensus 78 ~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i 157 (213)
..-.+|+ +.....|..++ .+| |..+..+++.++.++...+. +.++.++ +..+.++..++.+.+..
T Consensus 11 ~a~~~Wg-~~~~~~k~~~~----~~~-P~~~~~~R~~~a~l~l~~~~-----~~~~~~~----~~~~~~~~~~l~~~~~~ 75 (295)
T PRK11689 11 IAILLWS-TMVGLIRGVSE----SLG-PVGGAAMIYSVSGLLLLLTV-----GFPRLRQ----FPKRYLLAGGLLFVSYE 75 (295)
T ss_pred HHHHHHH-HHHHHHHHHHc----cCC-hHHHHHHHHHHHHHHHHHHc-----ccccccc----ccHHHHHHHhHHHHHHH
Confidence 3334555 56788899887 577 99999999988665543321 1111111 12233444566666666
Q ss_pred HHhhhhccc----chHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 158 NLSNESLVF----ISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 158 ~~~n~sL~~----vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
.+.+.+++| .+.....++-.+.|++++++++++.+||++++.++++++...|+++
T Consensus 76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~l 134 (295)
T PRK11689 76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAW 134 (295)
T ss_pred HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhh
Confidence 666666654 4556667888999999999999999999999999999998888753
No 21
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.17 E-value=8.8e-05 Score=62.93 Aligned_cols=119 Identities=21% Similarity=0.184 Sum_probs=82.9
Q ss_pred HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 041251 86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLV 165 (213)
Q Consensus 86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~ 165 (213)
...++.|+...+ .+ +-+..+..+++.++.++........ + +....+++++...+.-..+.......+-+.+++
T Consensus 142 ~~~~~~k~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 214 (260)
T TIGR00950 142 LGTVLYKRLVKK--EG-PELLQFTGWVLLLGALLLLPFAWFL--G--PNPQALSLQWGALLYLGLIGTALAYFLWNKGLT 214 (260)
T ss_pred HHHHHHhHHhhc--CC-chHHHHHHHHHHHHHHHHHHHHHhc--C--CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445667777642 12 1134455566776655544432221 1 112234444433333444456788889999999
Q ss_pred cchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251 166 FISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL 211 (213)
Q Consensus 166 ~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~ 211 (213)
+.+.+...++..+.|++.+++++++.+|+++...++++++++.|+.
T Consensus 215 ~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 215 LVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999863
No 22
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.08 E-value=5.6e-05 Score=68.64 Aligned_cols=119 Identities=13% Similarity=0.154 Sum_probs=82.3
Q ss_pred HHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcC-ccc-ccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 041251 88 TLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHR-FQH-TVSMSWRDYYVRVVPTGLATALDVNLSNESLV 165 (213)
Q Consensus 88 ~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~-~~~-~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~ 165 (213)
+++.|.... ++|.+..++++++++..+...+........ ... ....++. ...++-.+++.++...+-|++++
T Consensus 205 ~il~~~~~~----~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~i~y~~i~t~lay~lw~~~v~ 278 (358)
T PLN00411 205 FILQAHIMS----EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT--LITIVTMAIITSVYYVIHSWTVR 278 (358)
T ss_pred HHHHHHHHH----HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH--HHHHHHHHHHHHHHHHHHHHHHh
Confidence 345555554 566566777777776655444332221110 000 0112221 22244455666667778899999
Q ss_pred cchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 166 FISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 166 ~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+++.+...+.-.+.|++.+++++++++|++++..+++.++|+.|+.+
T Consensus 279 ~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l 325 (358)
T PLN00411 279 HKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYA 325 (358)
T ss_pred ccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999865
No 23
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.02 E-value=7.5e-05 Score=58.39 Aligned_cols=120 Identities=17% Similarity=0.172 Sum_probs=91.0
Q ss_pred HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 041251 86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLV 165 (213)
Q Consensus 86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~ 165 (213)
...++-|--++ +.+ |.+-|.++-++..+.+...+... .+......++.|. +..+.--++..+++-.+--.|++
T Consensus 17 L~~iF~KIGl~----~vd-p~~At~IRtiVi~~~l~~v~~~~-g~~~~~~~~~~k~-~lflilSGla~glswl~Yf~ALk 89 (140)
T COG2510 17 LTPIFAKIGLE----GVD-PDFATTIRTIVILIFLLIVLLVT-GNWQAGGEIGPKS-WLFLILSGLAGGLSWLLYFRALK 89 (140)
T ss_pred HHHHHHHHhcc----ccC-ccHHHHHHHHHHHHHHHHHHHhc-CceecccccCcce-ehhhhHHHHHHHHHHHHHHHHHh
Confidence 66688888887 445 88888888887666665544332 2333222345543 33444556777888888888999
Q ss_pred cchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 166 FISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 166 ~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
--..|-..=+-.++|+++++++++|.+||++.+++.++++|+.|+.+
T Consensus 90 ~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gail 136 (140)
T COG2510 90 KGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAIL 136 (140)
T ss_pred cCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence 88888888888899999999999999999999999999999999875
No 24
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.98 E-value=0.00011 Score=64.47 Aligned_cols=118 Identities=19% Similarity=0.232 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHH-H
Q 041251 77 ILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATA-L 155 (213)
Q Consensus 77 i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~-~ 155 (213)
++.-.+|+ +...+.|..++ +++ |..++++++.++++...... . + + +.+++ .++..+++.. .
T Consensus 10 l~~~~~Wg-~~~~~~k~~~~----~~~-p~~~~~~R~~~a~~~l~~~~--~--~--~--~~~~~----~~~~~g~~~~~~ 71 (299)
T PRK11453 10 LLVVVVWG-LNFVVIKVGLH----NMP-PLMLAGLRFMLVAFPAIFFV--A--R--P--KVPLN----LLLGYGLTISFG 71 (299)
T ss_pred HHHHHHHh-hhHHHHHHHHh----cCC-HHHHHHHHHHHHHHHHHHHh--c--C--C--CCchH----HHHHHHHHHHHH
Confidence 34445666 44555688876 577 99999999988554432211 1 1 1 12232 2333444332 3
Q ss_pred HHHHhhhhccc-chHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 156 DVNLSNESLVF-ISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 156 ~i~~~n~sL~~-vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
...+...+++| +|.+...++-.+.|+++.++++++.+||++.+.+.++++.+.|+.+
T Consensus 72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l 129 (299)
T PRK11453 72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLV 129 (299)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHH
Confidence 33344567777 7889999999999999999999999999999999999999998753
No 25
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.94 E-value=1.8e-05 Score=68.17 Aligned_cols=74 Identities=16% Similarity=0.183 Sum_probs=66.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 138 SWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 138 ~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++++.++.. .-|++|++...+...++.+++.+.||+++.+..+++.+++++++++|.+.+.|+++++++.|+++
T Consensus 13 ~~~~~~~~~-vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~l 86 (244)
T PF04142_consen 13 SPKDTLKLA-VPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVL 86 (244)
T ss_pred hHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHhe
Confidence 456655544 45677999999999999999999999999999999999999999999999999999999999875
No 26
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.85 E-value=9.2e-05 Score=56.39 Aligned_cols=62 Identities=18% Similarity=0.062 Sum_probs=58.0
Q ss_pred HHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 151 LATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 151 l~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+++.+...+-..+++.+|++....+-++.+++++++++++++|+++++.++++.+|+.|+++
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~ 106 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVI 106 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 56788888999999999999999999999999999999999999999999999999999753
No 27
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.82 E-value=0.00028 Score=61.29 Aligned_cols=72 Identities=17% Similarity=0.169 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 141 DYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 141 ~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+++..++..++.......+-..++++.+++..+.+-.+.|+++.++++++.+|+++.+.++++.+++.|+.+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~l 132 (281)
T TIGR03340 61 TFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLV 132 (281)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 345556667777888888999999999999999999999999999999999999999999999999999753
No 28
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.78 E-value=0.00057 Score=59.75 Aligned_cols=105 Identities=9% Similarity=0.037 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHH-HHHHHHHHhhhhcccchHhHHHHHhhhhhHHH
Q 041251 105 PLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGL-ATALDVNLSNESLVFISVTFATMCKSASPIFL 183 (213)
Q Consensus 105 P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl-~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv 183 (213)
+...+..|+.++.+...+..... ........+.+.+. .++-.++ ...+...+-+.++++++.+...+.-.++|++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a 253 (292)
T PRK11272 177 GMMAGAAEMLAAGVVLLIASLLS--GERLTALPTLSGFL-ALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVA 253 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHc--CCcccccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 45566788887666554433221 11111112343333 3333444 46677888999999999999999999999999
Q ss_pred HHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 184 LVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 184 ~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+++++++.+|+++...+.+.++|+.|+.+
T Consensus 254 ~i~~~~~l~E~~t~~~iiG~~lIi~gv~~ 282 (292)
T PRK11272 254 VLLGTGLGGETLSPIEWLALGVIVFAVVL 282 (292)
T ss_pred HHHHHHHcCCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988753
No 29
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=97.77 E-value=2.7e-06 Score=74.26 Aligned_cols=100 Identities=17% Similarity=0.255 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcc-cccccchHHHHHHHHHHHHHHHHHHHHhhhhccc-chHhHHHHHhhhhhHHH
Q 041251 106 LLMNTVHFSMQAILSKAIIWFWSHRFQ-HTVSMSWRDYYVRVVPTGLATALDVNLSNESLVF-ISVTFATMCKSASPIFL 183 (213)
Q Consensus 106 ~~Lt~~q~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~-vsVsf~q~iKs~tPifv 183 (213)
.++|..||++.+.-..+. . .++. ..++++.|+|.. +-.+|....+++|.++++ +|+|.+-+.|+.+++.+
T Consensus 34 NLITFaqFlFia~eGlif--~--skf~~~k~kiplk~Y~i----~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~n 105 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIF--T--SKFFTVKPKIPLKDYAI----TVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLAN 105 (330)
T ss_pred eehHHHHHHHHHHhceee--e--ccccccCCCCchhhhhe----ehheeeeeeeeccceeeecccceEEEEEecCcHHHH
Confidence 678899998755433221 1 1221 124566666654 445666677789999985 79999999999999999
Q ss_pred HHHHHHhhccCCChhHHHhhhheeeeeEeC
Q 041251 184 LVFAFAFRLESPSIKLLGIIIIISIGVLFS 213 (213)
Q Consensus 184 ~ll~~l~~~e~~s~~~~lsl~lIv~Gv~lA 213 (213)
+++++++.++|+|.+.+.|++.+.+|++++
T Consensus 106 M~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIc 135 (330)
T KOG1583|consen 106 MILGWILLGKRYSLRQYSSVLMITIGIIIC 135 (330)
T ss_pred HHHHHHhccceeehhhhhhHHhhhhhheeE
Confidence 999999999999999999999999999875
No 30
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.71 E-value=8.3e-05 Score=67.39 Aligned_cols=76 Identities=24% Similarity=0.186 Sum_probs=69.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 137 MSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 137 ~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++.++..+.-+-.+.++.+...+.|.||+|.+|+..+++-|++-.|+++++.++.+||+++.+++++++-++||++
T Consensus 153 ~t~~~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GVii 228 (416)
T KOG2765|consen 153 LTATQTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVII 228 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEE
Confidence 3444667777888889999999999999999999999999999999999999999999999999999999999986
No 31
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.69 E-value=0.0015 Score=55.35 Aligned_cols=70 Identities=23% Similarity=0.216 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHH-HhhccCCChhHHHhhhheeeeeEe
Q 041251 143 YVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAF-AFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 143 ~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~-l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
....+...+.......+-..++++++.+..+++.++.|+++.++++ ++++||++++.+++++.+..|+.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l 140 (292)
T COG0697 70 LLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLL 140 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHh
Confidence 4567778888888888999999999999999999999999999997 667999999999999999999875
No 32
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.60 E-value=0.003 Score=49.30 Aligned_cols=131 Identities=17% Similarity=0.161 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHhhcCC---CCCccchHHHHHHHHHHHHHHHHHHHHHHh-cCcccc----c--ccc-hHHHHHHHHHH
Q 041251 81 YTFSTFLTLYNKTLLGDD---MGKFPAPLLMNTVHFSMQAILSKAIIWFWS-HRFQHT----V--SMS-WRDYYVRVVPT 149 (213)
Q Consensus 81 ~~~Si~~~~~NK~ll~~~---~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~-~~~~~~----~--~~~-~~~~~~~vlP~ 149 (213)
.++......+.|.+++++ +.+.+ |+.+....-..+++.+.+...... .+..+. . +.. ..+.+..++..
T Consensus 9 ~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (153)
T PF03151_consen 9 SLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILS 87 (153)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHH
Confidence 344446666777777652 23555 555544444444444444332211 111010 0 111 22446667777
Q ss_pred HHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 150 GLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 150 sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+++..+....+.+.+++.|.-.++++.....+++.++++++++|+++...++++++.+.|+.+
T Consensus 88 ~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 88 GLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 888888889999999999999999999999999999999999999999999999999999764
No 33
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.48 E-value=0.0021 Score=56.23 Aligned_cols=104 Identities=13% Similarity=0.207 Sum_probs=73.7
Q ss_pred HHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccchH
Q 041251 90 YNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISV 169 (213)
Q Consensus 90 ~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsV 169 (213)
+.|++++ .+| |..+..+++++++++..++.+.. + .+.++++ .+..+..+++......+...+++|+|.
T Consensus 30 ~~K~~~~----~~~-~~~~~~~R~~~a~l~l~~~~~~~--~----~~~~~~~-~~~~~~~g~~~~~~~~~~~~al~~~~~ 97 (293)
T PRK10532 30 LAKSLFP----LVG-APGVTALRLALGTLILIAIFKPW--R----LRFAKEQ-RLPLLFYGVSLGGMNYLFYLSIQTVPL 97 (293)
T ss_pred HHHHHHH----HcC-HHHHHHHHHHHHHHHHHHHHhHH--h----ccCCHHH-HHHHHHHHHHHHHHHHHHHHHHhcccH
Confidence 6899987 477 88899999999776654432211 1 1234444 444666777788888888999999999
Q ss_pred hHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251 170 TFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL 211 (213)
Q Consensus 170 sf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~ 211 (213)
+...++-.+.|+++++++. |++..... +.+.+.|+.
T Consensus 98 ~~a~~l~~t~Pi~~~ll~~----~~~~~~~~--~~i~~~Gv~ 133 (293)
T PRK10532 98 GIAVALEFTGPLAVALFSS----RRPVDFVW--VVLAVLGLW 133 (293)
T ss_pred HHHHHHHHHHHHHHHHHhc----CChHHHHH--HHHHHHHHh
Confidence 9999999999999998863 55554444 334455543
No 34
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.34 E-value=0.0051 Score=53.81 Aligned_cols=63 Identities=19% Similarity=0.043 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 150 GLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 150 sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
-++..+...+-|.++++++.+...++-.++|++.+++++++.+|+++...+++..+|+.|++.
T Consensus 216 v~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~ 278 (293)
T PRK10532 216 ILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMG 278 (293)
T ss_pred HHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 334567777889999999999999999999999999999999999999999999999888653
No 35
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.33 E-value=0.0057 Score=53.58 Aligned_cols=76 Identities=12% Similarity=-0.061 Sum_probs=62.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 137 MSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 137 ~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
.++..+...+.-..+..++...+-+.++++.+.+-..++-.++|++..++++++.+|+++...+++.++|+.|+.+
T Consensus 209 ~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l 284 (299)
T PRK11453 209 IDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYI 284 (299)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHH
Confidence 4554444433334466667888888999999999999999999999999999999999999999999999998764
No 36
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.24 E-value=0.001 Score=57.77 Aligned_cols=71 Identities=18% Similarity=0.135 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 142 YYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 142 ~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++..+.-..++..+...+-+.++++.+.+.......++|++.+++++++.+|+++...+.+..+|+.|+.+
T Consensus 210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 34445556677778888999999999999999999999999999999999999999999999999999864
No 37
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.21 E-value=0.0023 Score=56.01 Aligned_cols=123 Identities=10% Similarity=-0.024 Sum_probs=78.5
Q ss_pred HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcc--cccc------cchHHHHHHHHHHHH-HHHHH
Q 041251 86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQ--HTVS------MSWRDYYVRVVPTGL-ATALD 156 (213)
Q Consensus 86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~--~~~~------~~~~~~~~~vlP~sl-~~~~~ 156 (213)
...++.|...+. .+++ |+.++..|+..+.+......... .... +... ..........+..++ ++...
T Consensus 159 ~~~v~~k~~~~~--~~~~-~~~~~~~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (302)
T TIGR00817 159 SRNIFSKKAMTI--KSLD-KTNLYAYISIMSLFLLSPPAFIT-EGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFY 234 (302)
T ss_pred HHHHHHHHhhcc--CCCC-cccHHHHHHHHHHHHHHHHHHHH-cchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHH
Confidence 445566666652 1344 77788888877766555443321 1100 0000 000000111112222 33333
Q ss_pred HHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 157 VNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 157 i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+.+.+.++++++-..+.+.-...|++++++++++.+|+++...+++..+++.|+.+
T Consensus 235 ~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l 290 (302)
T TIGR00817 235 QQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFL 290 (302)
T ss_pred HHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHH
Confidence 35566799999999999999999999999999999999999999999999999754
No 38
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.18 E-value=0.0083 Score=52.52 Aligned_cols=76 Identities=12% Similarity=0.129 Sum_probs=65.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 136 SMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 136 ~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
..+++.+.. ++-.++...+...+-|.++++.+.+...+.-.++|++.+++++++.+|+++...++++++|+.|+.+
T Consensus 209 ~~~~~~~~~-l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~ 284 (295)
T PRK11689 209 VFSLPAIIK-LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLL 284 (295)
T ss_pred cCCHHHHHH-HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHH
Confidence 355544333 4456677778888999999999999999999999999999999999999999999999999999754
No 39
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.96 E-value=0.015 Score=52.42 Aligned_cols=139 Identities=17% Similarity=0.136 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHh----cC----cccccccchHHH
Q 041251 71 LKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWS----HR----FQHTVSMSWRDY 142 (213)
Q Consensus 71 l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~----~~----~~~~~~~~~~~~ 142 (213)
.+.+..+.. .+-+.++.+.-|+--..++..|- |.+...+-=+...++|..+...-. .+ ..++..-.|++.
T Consensus 15 ~k~~~l~~~-t~~~~~l~l~l~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 92 (345)
T KOG2234|consen 15 MKYLSLIVL-TAQNTALTLLLRYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRET 92 (345)
T ss_pred HHHHHHHHH-HHHHhhHHHHHHHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHH
Confidence 444443333 34455777777777655444554 555554444445555555433211 01 111222234454
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 143 YVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 143 ~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
.+ +..-+++|++.+.+.-.++.+++-++||+.--+....+.++.+++.++|.+++.|.++++.+.|+.+
T Consensus 93 lk-~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~ 161 (345)
T KOG2234|consen 93 LK-VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVAL 161 (345)
T ss_pred HH-HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 44 4455678888888899999999999999999999999999999999999999999999999999864
No 40
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=96.93 E-value=0.0042 Score=54.84 Aligned_cols=129 Identities=20% Similarity=0.186 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHhhcC--CC-CCccchHHHHHHHHHHHHHHHHHHHHHHhcCc-----c-------cccccchHHHHHH
Q 041251 81 YTFSTFLTLYNKTLLGD--DM-GKFPAPLLMNTVHFSMQAILSKAIIWFWSHRF-----Q-------HTVSMSWRDYYVR 145 (213)
Q Consensus 81 ~~~Si~~~~~NK~ll~~--~~-~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~-----~-------~~~~~~~~~~~~~ 145 (213)
.+++..=++.-||.-+- ++ .+|..|+.-+.+ |+..=.+|...-+..+++. . ++.+-+.+ -..
T Consensus 12 vvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~-mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~--p~l 88 (372)
T KOG3912|consen 12 VVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALL-MFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN--PVL 88 (372)
T ss_pred hhhccHHHHHHHHHHhhhhhCCCccccHHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC--cce
Confidence 45565667888998442 22 248888876555 3333323322222211111 0 11111222 335
Q ss_pred HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
.+|-++|-..+--+-+.+|.+.+-|-+||+|-+..+|+-+++..+.+++...+.|+++.-++.|+++
T Consensus 89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlvi 155 (372)
T KOG3912|consen 89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVI 155 (372)
T ss_pred ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhhe
Confidence 6788999999999999999999999999999999999999999999999999999999998888754
No 41
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=96.89 E-value=0.025 Score=51.06 Aligned_cols=63 Identities=10% Similarity=0.053 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 150 GLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 150 sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++++.+.+.++-.++++++...+++.-.+.|+++.++++++.+|+.+...+++.+++++|+.+
T Consensus 283 ~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 283 GVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL 345 (350)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence 333333333333699999999999999999999999999999999999999999999999753
No 42
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.69 E-value=0.0033 Score=48.68 Aligned_cols=67 Identities=13% Similarity=0.154 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHhhhhcccchHhHHHHH-hhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 146 VVPTGLATALDVNLSNESLVFISVTFATMC-KSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~i-Ks~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
.+...++++.+..+-..+++++|++...-+ .....+.+.+.++++++|+.++..++++.+|++|+.+
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~ 100 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVL 100 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 355778888899999999999999987666 5688999999999999999999999999999999853
No 43
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=96.63 E-value=0.045 Score=47.93 Aligned_cols=66 Identities=12% Similarity=0.246 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251 146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL 211 (213)
Q Consensus 146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~ 211 (213)
++-.++...+...+-+.++++.+-+.....-..+|++.+++++++.+|+++...+++..+|+.|+.
T Consensus 216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~ 281 (296)
T PRK15430 216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALA 281 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 444555677888899999999999999999999999999999999999999999999999977654
No 44
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=96.48 E-value=0.006 Score=47.71 Aligned_cols=67 Identities=21% Similarity=0.090 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHH--hhccCCChhHHHhhhheeeeeEe
Q 041251 146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFA--FRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l--~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+.-.-+++.++..+=+.+++.++++...-+-+..++++.+.++. +++|+.++..++++++|+.|+.+
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~l 119 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWL 119 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 34456678888888999999999999998888888888888775 79999999999999999999864
No 45
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.42 E-value=0.01 Score=45.15 Aligned_cols=65 Identities=17% Similarity=0.215 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHhhhhcccchHhHHHHHhh-hhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 148 PTGLATALDVNLSNESLVFISVTFATMCKS-ASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 148 P~sl~~~~~i~~~n~sL~~vsVsf~q~iKs-~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
-.-+++..+..+-..+++.+|++...-+-+ ...+.+.+.++++++|+.++..++++.+|+.|+++
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~ 100 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLV 100 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 356677888888889999999999888865 57889999999999999999999999999999853
No 46
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=96.25 E-value=0.064 Score=47.07 Aligned_cols=67 Identities=19% Similarity=0.090 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHhhhhcccchHhHHHHHhh-hhhHHHHHHHHHhhccCCChhH----HHhhhheeeeeEe
Q 041251 146 VVPTGLATALDVNLSNESLVFISVTFATMCKS-ASPIFLLVFAFAFRLESPSIKL----LGIIIIISIGVLF 212 (213)
Q Consensus 146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs-~tPifv~ll~~l~~~e~~s~~~----~lsl~lIv~Gv~l 212 (213)
-+-.+++++.+..+...|.+++.++....+-. +.+++..+.+.++++|+.+.+. ++++++++.|+.+
T Consensus 62 g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l 133 (290)
T TIGR00776 62 GLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYL 133 (290)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHhe
Confidence 33445557888888889999999999988887 7788889999999999999998 9999999999765
No 47
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=96.23 E-value=0.15 Score=43.03 Aligned_cols=75 Identities=17% Similarity=0.224 Sum_probs=61.7
Q ss_pred cchHHHHHHHHHHHHHHH-HHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 137 MSWRDYYVRVVPTGLATA-LDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 137 ~~~~~~~~~vlP~sl~~~-~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
.+++. +..+...+++-. ....+-+.+++..+.+...++-.+.|++.+++++++.+|+++...+.+.++++.|+.+
T Consensus 209 ~~~~~-~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l 284 (292)
T COG0697 209 ILSRA-WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLL 284 (292)
T ss_pred CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 34433 334445555555 5888889999999999999999999999999999999999999999999999988754
No 48
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.22 E-value=0.018 Score=43.53 Aligned_cols=66 Identities=17% Similarity=0.049 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHhhhhcccchHhHHHHHhh-hhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 147 VPTGLATALDVNLSNESLVFISVTFATMCKS-ASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs-~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+...+++..+..+-..+++.+|++..-.+=+ ...+.+.+.++++++|+.++..++++.+|+.|++.
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~ 99 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIG 99 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHh
Confidence 3457788888889999999999998655544 67899999999999999999999999999999853
No 49
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.20 E-value=0.033 Score=42.42 Aligned_cols=66 Identities=9% Similarity=-0.031 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHhhhhcccchHhHHHHHh-hhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 147 VPTGLATALDVNLSNESLVFISVTFATMCK-SASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~iK-s~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+-..++++.+..+-..+++.+|++..-.+= ....+.+.+.++++++|+.++..++++.+|+.|++.
T Consensus 39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~ 105 (109)
T PRK10650 39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVM 105 (109)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 345667777888889999999999865544 467889999999999999999999999999999853
No 50
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=96.19 E-value=0.0037 Score=54.50 Aligned_cols=135 Identities=16% Similarity=0.211 Sum_probs=93.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHH
Q 041251 67 AADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRV 146 (213)
Q Consensus 67 ~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~v 146 (213)
-+|.+...+..=+--.++.+..+.|.++-+. +.+-|.+=+++....-+++=..+..+. . +.....|++|
T Consensus 13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k---~iN~Pt~QtFl~Y~LLalVY~~~~~fR-~---~~~~~~~~hY---- 81 (336)
T KOG2766|consen 13 TKKTLIGLGLGQILSLLITSTAFTSSELARK---GINAPTSQTFLNYVLLALVYGPIMLFR-R---KYIKAKWRHY---- 81 (336)
T ss_pred chhhhheeeHHHHHHHHHHcchhhhHHHHhc---cCCCccHHHHHHHHHHHHHHhhHHHhh-h---HHHHHHHHHh----
Confidence 3455555555544456666777888887663 467787766655544333222222211 1 2223445443
Q ss_pred HHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 147 VPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
+.++++-.-++.+--.|++|.+..-.+.+-+-..+.+++++|+|.+.|+.++.+.++++.++||++
T Consensus 82 illa~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~Gvvm 147 (336)
T KOG2766|consen 82 ILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVM 147 (336)
T ss_pred hheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEE
Confidence 445555555666667899999999999999999999999999999999999999999999999876
No 51
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=96.13 E-value=0.081 Score=46.42 Aligned_cols=66 Identities=15% Similarity=0.001 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHhhhhcc-cchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHH----HhhhheeeeeEe
Q 041251 147 VPTGLATALDVNLSNESLV-FISVTFATMCKSASPIFLLVFAFAFRLESPSIKLL----GIIIIISIGVLF 212 (213)
Q Consensus 147 lP~sl~~~~~i~~~n~sL~-~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~----lsl~lIv~Gv~l 212 (213)
+..++++.....+-..+++ +++.+...++-...|+...++++++.+|+.+.+.+ ++.++|++|+.+
T Consensus 215 ~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l 285 (290)
T TIGR00776 215 ILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANI 285 (290)
T ss_pred HHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHH
Confidence 3378888888888888999 99999999999999999999999999999999999 888888888754
No 52
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.02 E-value=0.0013 Score=57.54 Aligned_cols=63 Identities=27% Similarity=0.338 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 150 GLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 150 sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++.-..++.+...|++|.|++=..++--++|+|+.++++++++|+++....+..+.-..||++
T Consensus 104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVL 166 (346)
T KOG4510|consen 104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVL 166 (346)
T ss_pred hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEE
Confidence 445556777788999999999999999999999999999999999999888888888888875
No 53
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.95 E-value=0.2 Score=41.79 Aligned_cols=67 Identities=12% Similarity=0.003 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++-+.++.+..-.+-.+.++|.+..+..++-++.++++.++++++.+++++...+++..++..|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3445566677777889999999999999999999999999999999999999999999999999875
No 54
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=95.75 E-value=0.027 Score=42.73 Aligned_cols=65 Identities=20% Similarity=0.094 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHhhhhcccchHhHHH-HHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251 147 VPTGLATALDVNLSNESLVFISVTFAT-MCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL 211 (213)
Q Consensus 147 lP~sl~~~~~i~~~n~sL~~vsVsf~q-~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~ 211 (213)
+-..+++..+..+--.|++.+|++..- +---.-.+.+.+.++++++|+.+...++++.+++.|++
T Consensus 34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi 99 (106)
T COG2076 34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVI 99 (106)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHH
Confidence 345677888888889999999999854 44455788999999999999999999999999999975
No 55
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=95.40 E-value=0.34 Score=42.57 Aligned_cols=135 Identities=11% Similarity=0.136 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHH-HHHHHHHHHHHHHHHHHHH-hcCccccccc--chHHHHHHHHH
Q 041251 73 TLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLM-NTVHFSMQAILSKAIIWFW-SHRFQHTVSM--SWRDYYVRVVP 148 (213)
Q Consensus 73 ~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~L-t~~q~~~~~~l~~~l~~~~-~~~~~~~~~~--~~~~~~~~vlP 148 (213)
-.++++++.++......+++++++. ++-+ |.-+ -..|++ +.++..+..... .....+..+. ...+....++.
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~--~~~~-~~~~mfy~n~~-~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~ 230 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKK--YGKS-PWELMFYTNLF-SLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLL 230 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hCCc-HHHHHHHHHHH-HHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHH
Confidence 4555667777777888999999875 3433 3333 233333 333333222210 0111111000 11134566777
Q ss_pred HHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251 149 TGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL 211 (213)
Q Consensus 149 ~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~ 211 (213)
.+++.+....+-+...+..+--..+++..+--+++++++++++++++++..+.+++++..|..
T Consensus 231 ~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~ 293 (303)
T PF08449_consen 231 FSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIF 293 (303)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHH
Confidence 778888888877877787777777888888889999999999999999999999999998865
No 56
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.26 E-value=0.043 Score=42.05 Aligned_cols=69 Identities=17% Similarity=0.066 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccchHhHHHHH-hhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 143 YVRVVPTGLATALDVNLSNESLVFISVTFATMC-KSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 143 ~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~i-Ks~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
.+.++|..+-.++++++ ...+...++|...-+ -+++=+|+++.+++++.|..+.++++++++++.|+.+
T Consensus 42 ~~y~ipf~lNq~GSv~f-~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 42 PKYIIPFLLNQSGSVLF-FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 44567877777777664 456666777776655 4888999999999999999999999999999999986
No 57
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.53 E-value=0.084 Score=38.69 Aligned_cols=57 Identities=16% Similarity=0.031 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhhhhcccchHhHHH-HHhhhhhHHHHHHHHHhhccCCChhHHHhhhhe
Q 041251 150 GLATALDVNLSNESLVFISVTFAT-MCKSASPIFLLVFAFAFRLESPSIKLLGIIIII 206 (213)
Q Consensus 150 sl~~~~~i~~~n~sL~~vsVsf~q-~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lI 206 (213)
-.++.++..+-..+++++|++..- +......+.+.+.+.++++|+.++..++++.+|
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 347888888999999999999874 456688999999999999999999999998764
No 58
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=93.90 E-value=0.88 Score=41.17 Aligned_cols=58 Identities=22% Similarity=0.165 Sum_probs=46.9
Q ss_pred HHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 155 LDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 155 ~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
....+....+++-+-.+..+-=.++.++.++++.+++++++++.-+++.++|++|.++
T Consensus 245 ~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vv 302 (334)
T PF06027_consen 245 LFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVV 302 (334)
T ss_pred HHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhhe
Confidence 3333446666666666666766788999999999999999999999999999999875
No 59
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=93.55 E-value=0.13 Score=45.74 Aligned_cols=67 Identities=19% Similarity=0.071 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
|+-.-+.++++..++-.|+.+.|.+..|-+-+..-++.++++..+.+|+.+.+.+.++.+++.|+.+
T Consensus 53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~l 119 (300)
T PF05653_consen 53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVL 119 (300)
T ss_pred HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhhee
Confidence 3334455677778888899999999999999999999999999999999999999999999999764
No 60
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=92.58 E-value=0.02 Score=48.39 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=70.3
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 136 SMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 136 ~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
.++.|.++++..|.++++.+..+.--.+|+.++-+-.+.+-+.--.|+.+++++..++|+..-++++.++-++|+++
T Consensus 46 G~nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVm 122 (290)
T KOG4314|consen 46 GFNIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVM 122 (290)
T ss_pred CceeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEE
Confidence 45556678889999999999999999999999999999999999999999999999999999999999999999875
No 61
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=92.41 E-value=6.5 Score=33.78 Aligned_cols=131 Identities=17% Similarity=0.146 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcc-cccccchHHHHHHHHH
Q 041251 70 VLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQ-HTVSMSWRDYYVRVVP 148 (213)
Q Consensus 70 ~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~vlP 148 (213)
.+.-.+.+++-.++|.....++.+++... + -|+.+--+|+.+..++..++......+.. .+... ++.|-...+.
T Consensus 112 ~~~G~~~vl~~~~~S~~agVy~E~~lK~~--~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~-f~G~~~~~~~ 186 (244)
T PF04142_consen 112 PLLGLLAVLAAAFLSGFAGVYFEKLLKRS--N--VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGF-FHGYSWWVWI 186 (244)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHhccc--c--hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCc-hhhcchHHHH
Confidence 45556666776777778888888888753 2 47777778876655544444332211111 01111 1111112233
Q ss_pred HHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhh
Q 041251 149 TGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIII 205 (213)
Q Consensus 149 ~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~l 205 (213)
+.+..+.+=....+.+||..-=.-...-+.+.+.+.++++++.+.+++..-.++..+
T Consensus 187 ~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 187 VIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred HHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 444555444456677888887677777788999999999999999999988776544
No 62
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=92.08 E-value=2.5 Score=37.47 Aligned_cols=126 Identities=17% Similarity=0.143 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHH
Q 041251 74 LFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLAT 153 (213)
Q Consensus 74 ~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~ 153 (213)
++.+..|..|+ .+-++-|.+-. -| +.=+..-+.+-++.+..++.... .+.+...+. ++ ..+. -..+..
T Consensus 10 l~~l~Ay~lwG-~lp~y~kll~~-----~~-~~eIlahRviwS~~~~l~ll~~~-r~~~~~~~~-~~-~p~~--~~~~~l 77 (293)
T COG2962 10 LLALLAYLLWG-LLPLYFKLLEP-----LP-ATEILAHRVIWSFPFMLALLFLL-RQWRELKQL-LK-QPKT--LLMLAL 77 (293)
T ss_pred HHHHHHHHHHH-HHHHHHHHHcc-----CC-HHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHH-Hh-CcHH--HHHHHH
Confidence 44567788888 67777888742 33 33343444444444444433322 111111110 11 1111 123333
Q ss_pred HHHHHHhhhhcccchHhHHHHHhh-----hhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251 154 ALDVNLSNESLVFISVTFATMCKS-----ASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL 211 (213)
Q Consensus 154 ~~~i~~~n~sL~~vsVsf~q~iKs-----~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~ 211 (213)
+.-...+||.+-.-.+.=.+++-+ .-|++.++++.+|.+||.+...+.++.+-..||.
T Consensus 78 ~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~ 140 (293)
T COG2962 78 TALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVL 140 (293)
T ss_pred HHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 444445666554333333333332 4699999999999999999999999999888875
No 63
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=90.52 E-value=7.3 Score=34.62 Aligned_cols=69 Identities=16% Similarity=0.174 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251 143 YVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL 211 (213)
Q Consensus 143 ~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~ 211 (213)
...++-.++..+....+-..+-+.+|.|+.-++.=.+|....++++++++|.++...+.+-+.|-.|.+
T Consensus 211 ~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~ 279 (293)
T COG2962 211 WLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALA 279 (293)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 344566788888999999999999999999999999999999999999999999999888877766543
No 64
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=88.46 E-value=8.5 Score=32.94 Aligned_cols=75 Identities=15% Similarity=0.096 Sum_probs=52.6
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHH---HHHhhccCCChhHHHhhhheeee
Q 041251 135 VSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVF---AFAFRLESPSIKLLGIIIIISIG 209 (213)
Q Consensus 135 ~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll---~~l~~~e~~s~~~~lsl~lIv~G 209 (213)
.+.+.+.++--.+|+-+|+..-....-.....+++|..++-+-+.-+|.+.. +.++++.+.+....++-..+..|
T Consensus 94 ~~~s~~t~lal~~PCPvCl~Ai~~S~~l~a~~~~~s~~~ig~~~g~if~i~il~ss~i~r~~~~~~p~~LG~~Mi~~G 171 (224)
T PF09930_consen 94 KDSSRRTFLALSLPCPVCLTAIFFSIMLLAPSIGLSGWEIGLVLGLIFFILILLSSFIFRRLKKPYPIILGNFMIFLG 171 (224)
T ss_pred CCCcccchhhhhcCchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 3445566788899999999999888888889999999998887766655443 55555555444444454444444
No 65
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=87.59 E-value=8.9 Score=33.71 Aligned_cols=66 Identities=20% Similarity=0.074 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChh----HHHhhhheeeeeEe
Q 041251 147 VPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIK----LLGIIIIISIGVLF 212 (213)
Q Consensus 147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~----~~lsl~lIv~Gv~l 212 (213)
+..+++++.+..+.-.|.+.+-+...-.+--+..+.--+.+.++++|+-+.+ +++++++++.|.++
T Consensus 199 il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 199 ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 5578888888888888888877777777777778888888889999886655 56677777777654
No 66
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=87.02 E-value=3.3 Score=36.31 Aligned_cols=57 Identities=16% Similarity=0.041 Sum_probs=51.0
Q ss_pred HHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeee
Q 041251 154 ALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGV 210 (213)
Q Consensus 154 ~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv 210 (213)
++-..+-..++..+|=+.+.++-|+.|.+-.+..+++.+|++|...++++..|+.+.
T Consensus 221 alPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAs 277 (292)
T COG5006 221 ALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAAS 277 (292)
T ss_pred ccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 344567788999999999999999999999999999999999999999998887654
No 67
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=86.78 E-value=4.4 Score=37.39 Aligned_cols=126 Identities=15% Similarity=0.104 Sum_probs=69.0
Q ss_pred HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHH-HHHHHHHHHHHHHhhhhc
Q 041251 86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRV-VPTGLATALDVNLSNESL 164 (213)
Q Consensus 86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~v-lP~sl~~~~~i~~~n~sL 164 (213)
.++.+-|+-.++++.+-.-|++...+..+--.++.-.+..+...+. +.-+++-...+..+ +--.+...++=++=-+|.
T Consensus 261 vY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~-e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~ 339 (416)
T KOG2765|consen 261 VYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE-ERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAV 339 (416)
T ss_pred HHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc-CcccCCCCceeEeeeHhhHHHHHHHHHHHHHHH
Confidence 4455566666666557777788777665532222211111110111 11122211111111 111122222222333444
Q ss_pred ccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 165 VFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 165 ~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
...+.-..++.-+.+.+.-++.+.+++++.+|+.-+++-++|.+|.++
T Consensus 340 ~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~ 387 (416)
T KOG2765|consen 340 LLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVI 387 (416)
T ss_pred HhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhh
Confidence 445555566666778889999999999999999999999999888664
No 68
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=79.34 E-value=28 Score=27.22 Aligned_cols=118 Identities=18% Similarity=0.203 Sum_probs=77.4
Q ss_pred HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhc-CcccccccchHHHHHHHHHHHHHHHHHHHHhhhhc
Q 041251 86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSH-RFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESL 164 (213)
Q Consensus 86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL 164 (213)
...-+|-.+=+ ...-|+.-+.+-+.+..+.+.++...... ......+.+|- ..-.+++-+..+.+.+.+.
T Consensus 15 ~q~~~N~~L~~----~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-----~~lGG~lG~~~V~~~~~~v 85 (138)
T PF04657_consen 15 LQAAFNGQLGK----ALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-----AYLGGLLGVFFVLSNIILV 85 (138)
T ss_pred HHHHHHHHHHH----HhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-----HhccHHHHHHHHHHHHHHh
Confidence 45567776643 22337888888888877777665444322 11122234442 2337778888888888888
Q ss_pred ccchHhHHHHHhhh-hhHHHHHHHHH--h--hccCCChhHHHhhhheeeeeEe
Q 041251 165 VFISVTFATMCKSA-SPIFLLVFAFA--F--RLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 165 ~~vsVsf~q~iKs~-tPifv~ll~~l--~--~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
..+.++..+.+--+ .-+.-++++.+ + .+++.++.+++++++++.|+.+
T Consensus 86 p~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 86 PRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 88888877766554 45555666664 2 4577899999999999999864
No 69
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.29 E-value=3.9 Score=36.89 Aligned_cols=65 Identities=14% Similarity=0.047 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251 147 VPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL 211 (213)
Q Consensus 147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~ 211 (213)
+-.-+.+.++-..+-.|+.+.|-++.+-+-+++-+...+++..+.+|+.++...+++.+.+.|-.
T Consensus 68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst 132 (335)
T KOG2922|consen 68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGST 132 (335)
T ss_pred HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccE
Confidence 34556677777778889999999999999999999999999999999999999999999999864
No 70
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=68.82 E-value=83 Score=27.81 Aligned_cols=101 Identities=13% Similarity=0.150 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHH
Q 041251 70 VLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPT 149 (213)
Q Consensus 70 ~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~ 149 (213)
....+..+.++...+ +-|.++- .+. |.-.++++..+++++...+.+=|+. +.+++ ..+.++.-
T Consensus 15 ~~ll~amvsiq~Gas-----~Ak~LFP----~vG-~~g~t~lRl~~aaLIll~l~RPwr~------r~~~~-~~~~~~~y 77 (292)
T COG5006 15 LALLVAMVSIQSGAS-----FAKSLFP----LVG-AAGVTALRLAIAALILLALFRPWRR------RLSKP-QRLALLAY 77 (292)
T ss_pred HHHHHHHHHHHhhHH-----HHHHHcc----ccC-hhhHHHHHHHHHHHHHHHHhhHHHh------ccChh-hhHHHHHH
Confidence 344444555555544 4466654 334 7778899999877766665554422 34554 36678889
Q ss_pred HHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHH
Q 041251 150 GLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFA 187 (213)
Q Consensus 150 sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~ 187 (213)
+++...++.+=..|++.+|.+....+.-+.|+.+.++.
T Consensus 78 GvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~ 115 (292)
T COG5006 78 GVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS 115 (292)
T ss_pred HHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh
Confidence 99999999999999999999999999999999887763
No 71
>KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms]
Probab=66.86 E-value=22 Score=35.21 Aligned_cols=63 Identities=14% Similarity=0.189 Sum_probs=43.8
Q ss_pred CCCCCCCCCCCCCCCCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHH--HHH
Q 041251 44 GGPGSFGNGNTLPPKSKTKSVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTV--HFS 114 (213)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~--q~~ 114 (213)
+-.+|+.-+|.+..-.+|+.|.-+-..++.-+..++++ +.+.++|... + ++.| |+.++.+ |++
T Consensus 46 ed~~~spv~EVrl~Vp~tDDptlPv~TfRmW~Lg~~~~---iv~a~vNqFF-~---~R~~-~lsis~i~aQi~ 110 (761)
T KOG2262|consen 46 EDEEDSPVPEVRLTVPPTDDPTLPVLTFRMWFLGLISC---IVLAFVNQFF-S---YRYP-PLSISAIVAQIA 110 (761)
T ss_pred cccccCcchhheeecCCCCCCCchhHhHHHHHHHHHHH---HHHHHHhhhh-c---ccCC-CeehHHHHHHHH
Confidence 34556677788888888998888888888776665544 4667777764 3 3555 7777766 444
No 72
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=64.20 E-value=12 Score=33.57 Aligned_cols=137 Identities=9% Similarity=0.005 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHH-HHHHHHhcCccc-ccccchHHHHHHHHHHHH
Q 041251 74 LFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSK-AIIWFWSHRFQH-TVSMSWRDYYVRVVPTGL 151 (213)
Q Consensus 74 ~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~-~l~~~~~~~~~~-~~~~~~~~~~~~vlP~sl 151 (213)
..+..++.+....-..+-|.++..++++.+ ++.+...+--++.+... ............ ...-+|.-....++-.++
T Consensus 165 ~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv 243 (316)
T KOG1441|consen 165 FISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSV 243 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHH
Confidence 334555566666788888888865556777 55554443333333222 111111011100 001022111223334445
Q ss_pred HHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251 152 ATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL 211 (213)
Q Consensus 152 ~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~ 211 (213)
+..+-+...-+.+...|-=.|++.-...-+++++.++++.+++.++...++..+-+.|+.
T Consensus 244 ~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~ 303 (316)
T KOG1441|consen 244 LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVF 303 (316)
T ss_pred HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHH
Confidence 555555556666666666666666666666677778888888888999999888888875
No 73
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=61.90 E-value=57 Score=23.43 Aligned_cols=52 Identities=17% Similarity=0.293 Sum_probs=32.1
Q ss_pred cchhhhHHHHH-HHHHHHHHHHHHH-HHHHHHhhcCCCCCccchHHHHHHHHHH
Q 041251 64 VVSAADVLKTL-FLILMWYTFSTFL-TLYNKTLLGDDMGKFPAPLLMNTVHFSM 115 (213)
Q Consensus 64 ~~~~~~~l~~~-~~i~~w~~~Si~~-~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~ 115 (213)
+..+++.++.. ...++|++.|.+. .++-..+-+..-.+||....+..-.-+.
T Consensus 4 ~~yWr~n~rl~~~lL~iW~vvsfg~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~ 57 (81)
T PF13937_consen 4 RAYWRKNLRLIAILLAIWFVVSFGVGILFADELNQITFGGFPLGFWFAAQGSII 57 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeCCCChHHHHHHHhHHH
Confidence 34556655554 4677899999888 6766666333234787777764433333
No 74
>PF03303 WTF: WTF protein; InterPro: IPR004982 This is a family of mainly hypothetical Schizosacchoromyces pombe proteins that are often encoded near long terminal repeats within the genome. Their function is unknown but they contain several predicted transmembrane regions and at least one protein is up-regulated during meiosis []. Upregulation is also observed in histone deacetylase mutants, indicating their transcription is normally inhibited by hypoacetylation [].
Probab=61.07 E-value=1.1e+02 Score=26.47 Aligned_cols=52 Identities=15% Similarity=0.183 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHhhcCCCCCccch-HHHHHHHHHHHHHHHHHHHH
Q 041251 70 VLKTLFLILMWYTFS---TFLTLYNKTLLGDDMGKFPAP-LLMNTVHFSMQAILSKAIIW 125 (213)
Q Consensus 70 ~l~~~~~i~~w~~~S---i~~~~~NK~ll~~~~~~Fp~P-~~Lt~~q~~~~~~l~~~l~~ 125 (213)
.++.+..++..+..+ +....++|..+.+ |.+- +++-.+-++++.++..++.+
T Consensus 88 l~kl~is~~~v~v~n~~~~c~l~~k~a~F~~----~~~~ewvlfG~wc~~c~l~~i~l~~ 143 (247)
T PF03303_consen 88 LLKLLISFLPVSVFNFVAVCYLPYKDASFKD----YGFMEWVLFGIWCLTCTLLFIILTY 143 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 444444444444433 4445677777763 3322 23334434444444434433
No 75
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=58.18 E-value=62 Score=25.34 Aligned_cols=43 Identities=12% Similarity=0.216 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHH
Q 041251 68 ADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHF 113 (213)
Q Consensus 68 ~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~ 113 (213)
++.++++.+.+++.++++.=.++=|.++.. -=+||+||+-++-
T Consensus 53 ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~---m~NY~fFL~QlTt 95 (130)
T PF08627_consen 53 KENFKLLVYVVVYVVSGVINRVLYKKMTNP---MKNYPFFLNQLTT 95 (130)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHhh---cccchHHHHHhcc
Confidence 456778888888887776666666666653 2267888876643
No 76
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=54.10 E-value=1.3e+02 Score=25.16 Aligned_cols=48 Identities=10% Similarity=0.139 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHh
Q 041251 143 YVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAF 190 (213)
Q Consensus 143 ~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~ 190 (213)
+..++-.+++..+...+-+.++++++.+...+.-.+.|++.++++.+.
T Consensus 208 ~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 208 WLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 445566777888999999999999999999999999999999998653
No 77
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=51.61 E-value=44 Score=29.41 Aligned_cols=70 Identities=16% Similarity=0.104 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHh-hhhhHHHHHHHHHhhccCCChhH----HHhhhheeeeeEe
Q 041251 143 YVRVVPTGLATALDVNLSNESLVFISVTFATMCK-SASPIFLLVFAFAFRLESPSIKL----LGIIIIISIGVLF 212 (213)
Q Consensus 143 ~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iK-s~tPifv~ll~~l~~~e~~s~~~----~lsl~lIv~Gv~l 212 (213)
+..-+-.+++++++....-.|++++-||-.-=+- ...-+.+.+..+++++|..+... .+++++++.|+.+
T Consensus 45 ~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~l 119 (269)
T PF06800_consen 45 FIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVIL 119 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 4445678899999999999999888776542221 23456678889999999776443 3477778888754
No 78
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=48.28 E-value=93 Score=28.04 Aligned_cols=134 Identities=10% Similarity=-0.037 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCC-CccchHHHHHHHHHHHHHHHHHHHHHHhcCcc--cccccchH--HHHHHHH
Q 041251 73 TLFLILMWYTFSTFLTLYNKTLLGDDMG-KFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQ--HTVSMSWR--DYYVRVV 147 (213)
Q Consensus 73 ~~~~i~~w~~~Si~~~~~NK~ll~~~~~-~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~--~~~~~~~~--~~~~~vl 147 (213)
..+|+.++.++......+.|+-++..+. +|. +....-+.+...+.++...+ ..+. ....-.|. ..+..+.
T Consensus 158 gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~----lv~yNnl~~L~~l~~~~~~~-ge~~~l~~~~~~~~~~~~~~~~~ 232 (314)
T KOG1444|consen 158 GYSWALANCLTTAAFVVYVKKSVDSANLNKFG----LVFYNNLLSLPPLLILSFIT-GELDALSLNFDNWSDSSVLVVML 232 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccccccee----EEeehhHHHHHHHHHHHHHh-cchHHHHhhcccccchhHHHHHH
Confidence 4567778888888888999988765322 111 11111121111122222222 1111 00000111 1233334
Q ss_pred HHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251 148 PTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL 211 (213)
Q Consensus 148 P~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~ 211 (213)
--+++-.+-..++-++..++|-..++++-..--..+.+...++++++.++.-..++.+.+.|-+
T Consensus 233 lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv 296 (314)
T KOG1444|consen 233 LSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGV 296 (314)
T ss_pred HHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhh
Confidence 4444555555678889999999999999844444455556666888889999999888777654
No 79
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=47.20 E-value=21 Score=30.99 Aligned_cols=67 Identities=13% Similarity=0.018 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhhee
Q 041251 141 DYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIIS 207 (213)
Q Consensus 141 ~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv 207 (213)
+-+..++.-++|..+--.++-|+++..|...|.|+-++--....+.+.+++++..+...+.++++..
T Consensus 222 d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGf 288 (309)
T COG5070 222 DSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGF 288 (309)
T ss_pred HHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHH
Confidence 3466677788888888899999999999999999999988888889999999999999998887654
No 80
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=46.04 E-value=17 Score=27.81 Aligned_cols=69 Identities=17% Similarity=0.143 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccchHhHHH-HHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251 143 YVRVVPTGLATALDVNLSNESLVFISVTFAT-MCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212 (213)
Q Consensus 143 ~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q-~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l 212 (213)
++.++|..+-.+++.. -.+-|...|++... +.-+++-+|+.++.+.++-|.+..+.+++..+++.|+.+
T Consensus 53 w~Y~iPFllNqcgSal-y~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 53 WEYLIPFLLNQCGSAL-YYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHHHHHHHHHHhhHHH-HHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 3456676555444332 23344444544432 445678889999999999899999999999999999865
No 81
>COG4420 Predicted membrane protein [Function unknown]
Probab=45.89 E-value=92 Score=26.04 Aligned_cols=36 Identities=28% Similarity=0.445 Sum_probs=20.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHH
Q 041251 67 AADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNT 110 (213)
Q Consensus 67 ~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~ 110 (213)
++-.+-..+++++|++.++..... . --.|||+++.-
T Consensus 58 w~fil~~~~~ll~Wi~lNl~~~~~----~----~wDpyPFi~Ln 93 (191)
T COG4420 58 WAFILTFTLLLLLWIVLNLFLVPG----L----AWDPYPFILLN 93 (191)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcC----C----cCCCccHHHHH
Confidence 444555555666677666443322 1 24688988643
No 82
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=38.26 E-value=1.2e+02 Score=27.17 Aligned_cols=63 Identities=13% Similarity=0.072 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeee
Q 041251 147 VPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIG 209 (213)
Q Consensus 147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~G 209 (213)
+-++++-.+.-.+-..+++.---+=..+.|-+-.++.++...+|+++.|++.++.+.+.+++-
T Consensus 257 ~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS 319 (346)
T KOG4510|consen 257 VNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSS 319 (346)
T ss_pred EEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehh
Confidence 345555555556666676654444445778888999999999999999999999988877654
No 83
>PF06210 DUF1003: Protein of unknown function (DUF1003); InterPro: IPR010406 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=37.93 E-value=1.1e+02 Score=23.04 Aligned_cols=16 Identities=6% Similarity=0.420 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 041251 70 VLKTLFLILMWYTFST 85 (213)
Q Consensus 70 ~l~~~~~i~~w~~~Si 85 (213)
.....+++++|+.+++
T Consensus 7 i~~~~~~~~~Wi~~N~ 22 (108)
T PF06210_consen 7 IIIFTVFLAVWILLNI 22 (108)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 3344556777777773
No 84
>COG4327 Predicted membrane protein [Function unknown]
Probab=36.37 E-value=50 Score=24.52 Aligned_cols=48 Identities=15% Similarity=0.172 Sum_probs=28.5
Q ss_pred Ccccchhhh-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHH
Q 041251 61 TKSVVSAAD-VLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLM 108 (213)
Q Consensus 61 ~~~~~~~~~-~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~L 108 (213)
++++..++. ...+..+..+|++.|...+++-+.+=+-.-.++|+-.-+
T Consensus 8 ~~a~aywranttli~~lL~vwflVSfvvi~fa~alst~rifg~pf~ywm 56 (101)
T COG4327 8 HPARAYWRANTTLIAALLGVWFLVSFVVILFARALSTMRIFGWPFGYWM 56 (101)
T ss_pred cHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhcccEEeccchhhhh
Confidence 344444444 445556788999999998888777532222345544433
No 85
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=28.81 E-value=4.6e+02 Score=24.02 Aligned_cols=126 Identities=13% Similarity=0.107 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHH----HHHHHHHHH
Q 041251 76 LILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDY----YVRVVPTGL 151 (213)
Q Consensus 76 ~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~----~~~vlP~sl 151 (213)
.++..+.+|.....+..+++... +-++-+--+|+.+-.++..++.... .+..+. .|+.+ =..++-+-+
T Consensus 187 avl~~c~~SgfAgvYfEkiLK~s----~~s~wi~NiqL~~~g~~f~~l~~~~-~d~~~i---~~~gff~G~s~~vw~vVl 258 (345)
T KOG2234|consen 187 AVLVACFLSGFAGVYFEKILKGS----NVSLWIRNIQLYFFGILFNLLTILL-QDGEAI---NEYGFFYGYSSIVWLVVL 258 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CchHHHHHHHHHHHHHHHHHHHHhh-cccccc---ccCCccccccHHHHHHHH
Confidence 34555666666667888888632 2355565566654333333332221 122221 12221 122333344
Q ss_pred HHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeee
Q 041251 152 ATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIG 209 (213)
Q Consensus 152 ~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~G 209 (213)
..+++=.+..+-.+|..-=+-...-+.+.+++.+.++.+++.+++..-.++..+++.-
T Consensus 259 ~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~S 316 (345)
T KOG2234|consen 259 LNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILS 316 (345)
T ss_pred HHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHH
Confidence 4444444455566666654555555778899999999999999999888877766543
No 86
>TIGR03647 Na_symport_sm probable solute:sodium symporter small subunit. Members of this family are highly hydrophobic bacterial proteins of about 90 amino acids in length. Members usually are found immediately upstream (sometimes fused to) a member of the solute:sodium symporter family, and therefore are a putative sodium:solute symporter small subunit. Members tend to be found in aquatic species, especially those from marine or other high salt environments.
Probab=28.07 E-value=2.2e+02 Score=20.15 Aligned_cols=44 Identities=14% Similarity=0.177 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHhhcCCCCCccchHHHHHHHHHH
Q 041251 72 KTLFLILMWYTFSTFLTL-YNKTLLGDDMGKFPAPLLMNTVHFSM 115 (213)
Q Consensus 72 ~~~~~i~~w~~~Si~~~~-~NK~ll~~~~~~Fp~P~~Lt~~q~~~ 115 (213)
.+.....+|++.|.+..+ +-..+=+-.-.+||....+..-.-..
T Consensus 9 li~~lL~iWf~vsfg~~~lf~~~Ln~~~~~GfPlgfw~aaQGsi~ 53 (77)
T TIGR03647 9 LIAVLLAIWFVVSFGAGILFADELNSFTFFGFPLGFWFAQQGSIY 53 (77)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHcCCeeCCCChHHHHHHhhHHH
Confidence 344467788888876654 33322111113787777764433333
No 87
>KOG3747 consensus Concentrative Na+-nucleoside cotransporter CNT1/CNT2 [Nucleotide transport and metabolism; Inorganic ion transport and metabolism]
Probab=24.94 E-value=6.5e+02 Score=24.53 Aligned_cols=32 Identities=16% Similarity=0.437 Sum_probs=24.1
Q ss_pred HHHHHhhhhhHHHHHHHHHh--hccCCChhHHHh
Q 041251 171 FATMCKSASPIFLLVFAFAF--RLESPSIKLLGI 202 (213)
Q Consensus 171 f~q~iKs~tPifv~ll~~l~--~~e~~s~~~~ls 202 (213)
-+|++--..|++-+++.+++ .+.+.+|+...+
T Consensus 176 ~~qLv~f~g~v~fIl~~f~fSk~~~~V~WriV~~ 209 (602)
T KOG3747|consen 176 PQQLVGFGGPVFFILFLFVFSKHHRAVNWRIVTS 209 (602)
T ss_pred HHHhhccccHHHHHHHHHhhcCCccccchhhhhH
Confidence 45677777899999999999 445678887654
No 88
>COG3274 Predicted O-acyltransferase [General function prediction only]
Probab=23.97 E-value=2.6e+02 Score=25.46 Aligned_cols=60 Identities=18% Similarity=0.273 Sum_probs=0.0
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhhhcccchHh-------HHHHHhhhhhHHHHHHHHHhhccC
Q 041251 135 VSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVT-------FATMCKSASPIFLLVFAFAFRLES 194 (213)
Q Consensus 135 ~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVs-------f~q~iKs~tPifv~ll~~l~~~e~ 194 (213)
+++.|=|-.|.+.-.++...=....+-.=-..++.+ +.+..|.+.|+|.++-++++.+|+
T Consensus 3 ~ri~wiD~~r~iA~f~VV~iH~~~~~~t~~~~vs~~~w~i~nvlns~sr~aVPLFfmISGyL~~~e~ 69 (332)
T COG3274 3 PRIVWIDLLRSIACFMVVMIHSTLWSVTEAHFVSPTLWIIANVLNSASRVAVPLFFMISGYLFFGER 69 (332)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
No 89
>COG2510 Predicted membrane protein [Function unknown]
Probab=22.21 E-value=3.7e+02 Score=21.35 Aligned_cols=51 Identities=14% Similarity=0.163 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhcc
Q 041251 143 YVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLE 193 (213)
Q Consensus 143 ~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e 193 (213)
.-..+-.++++++.-.++-..++.+...|.+.+|+...+..++.-.+..++
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~ 55 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGN 55 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCc
Confidence 334455677778888888889999999999999987766666555555443
No 90
>PRK07668 hypothetical protein; Validated
Probab=20.58 E-value=5.7e+02 Score=22.26 Aligned_cols=9 Identities=11% Similarity=0.006 Sum_probs=4.1
Q ss_pred HHHHHHhhc
Q 041251 88 TLYNKTLLG 96 (213)
Q Consensus 88 ~~~NK~ll~ 96 (213)
.++.|..+.
T Consensus 126 ~~~r~~~fk 134 (254)
T PRK07668 126 FLLRMASFK 134 (254)
T ss_pred HHHHHHHHh
Confidence 344444443
Done!