Your job contains 1 sequence.
>041252
MPMFQPSKRDVLVGFEGSGDGQILDLDTAVKDGVLGGTVGAGVTGAGVGERLDLKKMIAE
LDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVT
PNKTLYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAAAH
ASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVD
MLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGILPGLSLL
RSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKLALKDCANT
IPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLK
QRSAELLKLCSLNYTDTTFISKCKLTRTIQ
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041252
(450 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 1712 2.8e-176 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 1594 9.0e-164 1
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 355 1.8e-32 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 347 1.3e-31 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 341 2.4e-30 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 335 1.2e-29 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 326 1.6e-28 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 195 2.7e-28 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 322 2.9e-28 1
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 191 4.2e-28 3
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 312 4.5e-26 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 309 1.3e-25 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 193 1.5e-25 2
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 301 1.5e-24 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 291 4.4e-24 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 286 1.6e-23 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 273 8.1e-22 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 170 1.3e-21 2
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 161 1.4e-19 2
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 251 4.8e-19 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 247 5.7e-19 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 153 1.5e-18 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 220 5.4e-15 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 217 1.2e-14 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 167 2.7e-14 2
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 173 3.3e-14 2
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 201 9.4e-13 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 150 1.7e-12 2
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 192 3.2e-12 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 190 5.7e-12 1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 191 1.0e-11 1
TAIR|locus:2075457 - symbol:AT3G02840 species:3702 "Arabi... 181 3.6e-11 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 185 4.8e-11 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 183 9.3e-11 1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 137 1.6e-10 2
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 177 1.6e-10 1
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 168 3.9e-09 1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 167 4.3e-09 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 141 1.5e-08 2
TAIR|locus:1005716696 - symbol:AT1G08315 species:3702 "Ar... 155 2.1e-08 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 143 6.1e-07 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 145 6.2e-07 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 144 1.0e-06 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 142 1.3e-06 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 142 1.4e-06 1
DICTYBASE|DDB_G0293266 - symbol:gxcY "armadillo repeat-co... 145 2.0e-06 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 142 2.5e-06 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 138 2.7e-06 1
TAIR|locus:2157358 - symbol:AT5G50900 species:3702 "Arabi... 137 6.1e-06 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 136 6.4e-06 1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 134 1.4e-05 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 132 1.7e-05 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 132 2.0e-05 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 130 2.4e-05 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 130 2.8e-05 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 128 2.8e-05 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 126 3.5e-05 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 128 4.7e-05 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 129 4.8e-05 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 127 6.1e-05 1
TAIR|locus:2144261 - symbol:AT5G11550 species:3702 "Arabi... 124 6.1e-05 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 125 0.00010 1
TAIR|locus:2038598 - symbol:AT2G27430 "AT2G27430" species... 124 0.00011 1
CGD|CAL0001835 - symbol:VAC8 species:5476 "Candida albica... 126 0.00014 1
UNIPROTKB|Q59MN0 - symbol:VAC8 "Vacuolar protein 8" speci... 126 0.00014 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 126 0.00016 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 125 0.00020 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 118 0.00039 1
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi... 118 0.00058 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 119 0.00094 1
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 1712 (607.7 bits), Expect = 2.8e-176, P = 2.8e-176
Identities = 335/450 (74%), Positives = 382/450 (84%)
Query: 1 MPMFQPSKRDVLVGFEGSGDGQILDLDTAVKDXXXXXXXXXXXXXXXXXERLDLKKMIAE 60
MPMFQP KRD L+GFEG GDGQ+LDLDTAVKD E+LDLKKMI E
Sbjct: 1 MPMFQPLKRDGLIGFEGGGDGQVLDLDTAVKDGVLGGVNGGGVGVVD--EKLDLKKMIKE 58
Query: 61 LDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVT 120
LDL +IPSVF+CPISLEPMQDPVTLCTGQTYER NI KWF+LG TCPTTMQELWDD+VT
Sbjct: 59 LDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVT 118
Query: 121 PNKTLYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAAAH 180
PNKTL+HLI+TWFSQKY+LMKKRSEDVQGRA E+LGTLKK KGQARV AL EL QI AH
Sbjct: 119 PNKTLHHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQARVHALSELKQIVIAH 178
Query: 181 ASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVD 240
ARKT+V+EGGV++ISSLLGPFTSHAVGSE V +LV+L LDS+SK+ LMQPAKVSL+VD
Sbjct: 179 LMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGLMQPAKVSLIVD 238
Query: 241 MLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGILPGLSLL 300
MLN+GS ETKINC RLI L+EEK FR E+VSSH LL+GLMRLVK+KRH NG+ P L LL
Sbjct: 239 MLNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKRHRNGVSPALRLL 298
Query: 301 RSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKLALKDCANT 360
+ I + +VRSL+VSIGAVPQLV++LPSLDP+CL+LAL +LDAL + EG++A+KD ANT
Sbjct: 299 KPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKDSANT 358
Query: 361 IPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLK 420
IP TVR+LMRVSE+CT YALSILWS+CK+APEECS AV+ GLAAKL LVIQSGC+ LK
Sbjct: 359 IPYTVRVLMRVSENCTNYALSILWSVCKLAPEECSPLAVEVGLAAKLLLVIQSGCDAALK 418
Query: 421 QRSAELLKLCSLNYTDTTFISKCKLTRTIQ 450
QRSAELLKLCSL+Y+DT FISKCKLTRTIQ
Sbjct: 419 QRSAELLKLCSLHYSDTMFISKCKLTRTIQ 448
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 1594 (566.2 bits), Expect = 9.0e-164, P = 9.0e-164
Identities = 313/451 (69%), Positives = 372/451 (82%)
Query: 1 MPMFQPSKRDVLVGFEGSGDGQILDLDTAVKDXXXXXXXXXXXXXXXXXER-LDLKKMIA 59
MPMFQPSK GF DG ILDL +AVKD ++ LDLK+MI+
Sbjct: 1 MPMFQPSKNG---GF----DGHILDLHSAVKDGVLGGGDGKFLVVVTDEKKKLDLKEMIS 53
Query: 60 ELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSV 119
EL+L EIPSVF+CPISLEPMQDPVTLCTGQTYERSNILKWF++G TCPTTMQELWDD V
Sbjct: 54 ELELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLV 113
Query: 120 TPNKTLYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAAA 179
TPNKTL+ LI+TWFSQKY+LMKKRSEDVQGRA E+LGTL+K KG+A+V AL EL Q+ A
Sbjct: 114 TPNKTLHQLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLRKAKGKAKVHALSELKQVVMA 173
Query: 180 HASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLV 239
HA A+KT+VDEGGV +ISSLL PFTSHAVGSEA+ +LVNL LDS+SK LMQPA+VSL+V
Sbjct: 174 HAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELDSDSKAGLMQPARVSLMV 233
Query: 240 DMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGILPGLSL 299
DMLN+GS+ETKINC RLI +L+EEK FR E+VSSH LL+GLMRLVK++R NG+ P L+L
Sbjct: 234 DMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKDRRRRNGVSPALTL 293
Query: 300 LRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKLALKDCAN 359
L+S+ + +VR+L+V IGAVPQLV++LP LD +CL+ AL +LD+L EG++ALKD N
Sbjct: 294 LKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGRIALKDSVN 353
Query: 360 TIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVL 419
TIP+TVRLLM+VSE CT YA+SILWS+CK+A EECSS AV+ GLAAKL LVIQSGC+P L
Sbjct: 354 TIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVEVGLAAKLLLVIQSGCDPAL 413
Query: 420 KQRSAELLKLCSLNYTDTTFISKCKLTRTIQ 450
KQRSAELLKLCSL+Y+D+ FISKCKLTRTIQ
Sbjct: 414 KQRSAELLKLCSLHYSDSMFISKCKLTRTIQ 444
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 102/393 (25%), Positives = 192/393 (48%)
Query: 65 EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRY-TCPTTMQELWDDSVTPNK 123
EIP F+CPISLE M+DPV + TG TY+R +I KW G+ +CP T Q++ D +TPN
Sbjct: 11 EIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNH 70
Query: 124 TLYHLIHTW--FSQKYLLMKKRSEDVQGRASELLGTLKKVKG--QARVQALKELHQIAAA 179
TL LI +W + Y + + + SE+ ++ + +V+ LK L QI +
Sbjct: 71 TLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIVSE 130
Query: 180 HASARKTMVDEGGVALISSLLGPFTSH-AVGSEAVGVLVNLTLDSESKTNLMQPAK---- 234
+A+ ++ + G +++++ + + ++ EA+ +L +L NL+ K
Sbjct: 131 NATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNNKKDNNI 190
Query: 235 VSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGIL 294
V L ++ G E+++ T L++ ++E D + + +++++ ++
Sbjct: 191 VKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRISQKATK 250
Query: 295 PGLSLLRSICLLNEVRSLVVSIGAVPQLVELL--PSLDPDCL--QLALCILDALSSLPEG 350
+ +L +IC R V G + ++ELL S + ++A+ +LD L EG
Sbjct: 251 AAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEG 310
Query: 351 KLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKI-APEECSSAAVDAGLAAKLFL 409
+ + I + ++RVS+ + A+ +L S+ + A + G+ AKL L
Sbjct: 311 RAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQLGVVAKLCL 370
Query: 410 VIQSGCNPVLKQRSAELLKLCSLNYTDTTFISK 442
V+Q C K+++ ELLKL + + D+ + K
Sbjct: 371 VLQVSCGGKTKEKAKELLKLHARVWKDSPCLPK 403
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 109/408 (26%), Positives = 193/408 (47%)
Query: 60 ELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSV 119
+L + +P F CPISL+ M+ PV+L TG TY+R +I +W G TCP TMQ L +
Sbjct: 5 DLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEF 64
Query: 120 TPNKTLYHLIHTWFSQKYLLMKKRS-EDVQGRASELLGTLKK--VKGQARVQALKELHQI 176
PN TL+ LI W S E E+ +++ ++ AR + L+
Sbjct: 65 VPNLTLHRLIDHWSDSINRRADSESPESDTPTRDEINAAIERFRIENDARSKILR----F 120
Query: 177 AAAHASARKTMVDEGG-VALISSLLGPFTSHA------VGSEAVGVLVNLT---LDSESK 226
A R+ + + VA++ L+ + + VG EAV +L + D
Sbjct: 121 ARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVG-EAVKILSMIRRKIFDRRRL 179
Query: 227 TNLMQPAKVSLLVD---MLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRL 283
+NL+ L ++ G+ + KI+C+ ++E + + + + I L+ +++L
Sbjct: 180 SNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEIIKL 239
Query: 284 VKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELL--PSLDPDCLQLALCIL 341
+ + + I LSLL +I V+ ++ V +L LL P+ + L +L
Sbjct: 240 ISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTEKCLKLL 299
Query: 342 DALSSLPEGKLALKD--CANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEE-CSSAA 398
+A+SS EG+ + D C T+ N LM+VS T++A+++LWS+C + E+ A
Sbjct: 300 EAISSCKEGRSEICDGVCVETVVNK---LMKVSTAATEHAVTVLWSVCYLFKEKKAQDAV 356
Query: 399 VDAGLAAKLFLVIQSGCNPVLKQRSAELLKLCSLNYTDTTFISKCKLT 446
+ K+ L++QS C+ ++ +LLK+ +N + + K T
Sbjct: 357 IRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNSRSCLSVYETKTT 404
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 341 (125.1 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 110/378 (29%), Positives = 183/378 (48%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CPISLE MQDPV + +GQTYERS I KW G TCP T Q L S+TPN L
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 126 YHLIHTWFSQKYLLM---KKRSEDVQGRASE------LLGTLKKVK-GQARVQ--ALKEL 173
LI W + + K+ S D + S L+ + +++ G Q A E+
Sbjct: 288 KSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEI 347
Query: 174 HQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPA 233
+A + + R + + G + L+ +LL + AV L+NL++ +K +++
Sbjct: 348 RLLAKRNVNNRICIAEAGAIPLLVNLLSS-SDPRTQEHAVTALLNLSIHENNKASIVDSH 406
Query: 234 KVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGI 293
+ +V++L GS+ET+ N + L D + + + L+ L+ + P G
Sbjct: 407 AIPKIVEVLKTGSMETRENAAATLFSL-SVVDENKVTIGAAGAIPPLINLLCDGS-PRGK 464
Query: 294 LPGLSLLRSICLL--NEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGK 351
+ + ++C+ N+VR+ V G V L+ L + AL +L L+ PEGK
Sbjct: 465 KDAATAIFNLCIYQGNKVRA--VKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGK 522
Query: 352 LALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLVI 411
+ + + IP V ++ S + A +ILW +C A E + AA AG+ L +
Sbjct: 523 IVIAR-SEPIPPLVEVIKTGSPRNRENAAAILWLLCS-ADTEQTLAAKAAGVEDALKELS 580
Query: 412 QSGCNPVLKQRSAELLKL 429
++G + K++++ +L+L
Sbjct: 581 ETGTDRA-KRKASSILEL 597
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 335 (123.0 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 110/380 (28%), Positives = 179/380 (47%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CPISLE M+DPV + TGQTYERS+I KW G TCP + + L +TPN L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 126 YHLIHTWFSQKYLLMKK-----RSEDVQGRASE------LLGTLKKV-KGQARVQ--ALK 171
LI W + + + R+ + G +S +L L+K+ G Q A
Sbjct: 308 KSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAG 367
Query: 172 ELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQ 231
EL +A + R + + G + L+ LL +V L+NL+++ +K ++
Sbjct: 368 ELRLLAKRNVDNRVCIAEAGAIPLLVELLSS-PDPRTQEHSVTALLNLSINEGNKGAIVD 426
Query: 232 PAKVSLLVDMLNEGSVETKINCTRLIEKL--MEEKDFRPEIVSSHRLLIGLMRLVKNKRH 289
++ +V++L GS+E + N + L ++E + + LI L+ + R
Sbjct: 427 AGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLE--EGTRR 484
Query: 290 PNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPE 349
G + + ++C+ +S V G V L LL + AL IL LS+ E
Sbjct: 485 --GKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQE 542
Query: 350 GKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFL 409
GK A+ + A +IP V ++ S + A +ILW +C I E + A + G L
Sbjct: 543 GKTAIAE-AESIPVLVEIIRTGSPRNRENAAAILWYLC-IGNIERLNVAREVGADVALKE 600
Query: 410 VIQSGCNPVLKQRSAELLKL 429
+ ++G + K+++A LL+L
Sbjct: 601 LTENGTDRA-KRKAASLLEL 619
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 326 (119.8 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 105/378 (27%), Positives = 178/378 (47%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CPISLE M+DPV + TGQTYER+ I KW + G +TCPTT Q++ ++TPN L
Sbjct: 273 IPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVL 332
Query: 126 YHLIHTWFSQKYLLMKKRSEDVQG-----RASE------LLGTLKKVKGQARVQALKELH 174
LI W + KRS +SE LL L + + A EL
Sbjct: 333 RSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELR 392
Query: 175 QIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAK 234
+A +A+ R + + G + L+ SLL + AV L+NL++ ++K +++
Sbjct: 393 LLAKRNANNRICIAEAGAIPLLLSLLSS-SDLRTQEHAVTALLNLSIHEDNKASIISSGA 451
Query: 235 VSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGIL 294
V +V +L GS+E + N + L +++ I + L+ L+ + G
Sbjct: 452 VPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTI-GGMGAIPALVVLL-GEGSQRGKK 509
Query: 295 PGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKLAL 354
+ L ++C+ + + G VP ++ L+ + + A+ IL LSS PEGK A+
Sbjct: 510 DAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAI 569
Query: 355 KDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSA-AVDAGLAAKLFLVIQS 413
A +P V ++ + + A +++ +C A A + G+ L + +
Sbjct: 570 -GAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALN 628
Query: 414 GCNPVLKQRSAELLKLCS 431
G + K+++ +LL+ S
Sbjct: 629 GTDRG-KRKAVQLLERMS 645
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 195 (73.7 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 58/235 (24%), Positives = 123/235 (52%)
Query: 212 AVGVLVNLTLDSESKTNLMQPAK----VSLLVDMLNEGSVETKINCTRLIEKLMEEKDFR 267
A+ +L ++ +D E +NLM ++ ++ + G++E+KI R+++ + + +
Sbjct: 164 AIRILDSIKVDRERLSNLMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSK 223
Query: 268 PEIVSSHRLLIGLMRLVK--NKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVEL 325
I +L +M+ + P+ I LS L +I VRS +++ A+ ++ ++
Sbjct: 224 LMIAERDGVLTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDI 283
Query: 326 LPS---LDPDCLQLALCILDALSSLPEGKLAL--KDCANTIPNTVRLLMRVSEDCTQYAL 380
L + + + +L +L+ LSS EG+L + D + V+ L++VS T++A+
Sbjct: 284 LLTETLTNVAVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAV 343
Query: 381 SILWSICKIAPEECS-SAAVD-AGLAAKLFLVIQSGCNPVLKQRSAELLKLCSLN 433
+ILW +C + E+ + V+ + KL +VIQS C+ +++Q + +L+K+ N
Sbjct: 344 TILWCLCYVFREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFN 398
Score = 190 (71.9 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 35/67 (52%), Positives = 44/67 (65%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
+PS F CPISL+ M+ PV+LCTG TY+R++I +W G TCP TMQ L PN TL
Sbjct: 12 VPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTL 71
Query: 126 YHLIHTW 132
LI+ W
Sbjct: 72 QRLINIW 78
Score = 55 (24.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 40/205 (19%), Positives = 95/205 (46%)
Query: 234 KVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGI 293
+V++L++ L S+E + R ++ ++F + + +L+ ++R K K +
Sbjct: 106 EVNVLLERLM--SLENLMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIEL--V 161
Query: 294 LPGLSLLRSICLLNE-VRSLVVSIGAVPQLVELLPSLDPDCLQL---ALCILDALSSLPE 349
+ + +L SI + E + +L+++ L +L ++ L+ ++ +LD +S +
Sbjct: 162 IMAIRILDSIKVDRERLSNLMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAK 221
Query: 350 GKLALKDCANTIPNTVRLL-MRVSEDCT--QYALSILWSICKIAPEECSSAAVDAGLAAK 406
KL + + + ++ + + S D + + +LS L +I K A A K
Sbjct: 222 SKLMIAERDGVLTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIK 281
Query: 407 LFLVIQSGCNPVLKQRSAELLKLCS 431
L+ ++ N + ++S +LL+ S
Sbjct: 282 DILLTETLTNVAVTEKSLKLLETLS 306
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 322 (118.4 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 103/379 (27%), Positives = 186/379 (49%)
Query: 62 DLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTP 121
D IP F+CP+SLE M+DPV + TGQTYER+ I +W G TCP T Q+L + ++TP
Sbjct: 237 DKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTP 296
Query: 122 NKTLYHLIHTWFSQKYL-----LMKKRSEDVQGRASELLGTLKKVKGQA---RVQALKEL 173
N L LI W ++ + + R+++ G S + ++++ ++ R A+ E+
Sbjct: 297 NYVLRSLISRWCAEHNIEQPAGYINGRTKN-SGDMSVIRALVQRLSSRSTEDRRNAVSEI 355
Query: 174 HQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSE--AVGVLVNLTLDSESKTNLMQ 231
++ R + + G + ++ +LL TS V ++ A+ ++NL++ +K +M
Sbjct: 356 RSLSKRSTDNRILIAEAGAIPVLVNLL---TSEDVATQENAITCVLNLSIYENNKELIMF 412
Query: 232 PAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPN 291
V+ +V +L G++E + N + L D I+ + L+ L++N P
Sbjct: 413 AGAVTSIVQVLRAGTMEARENAAATLFSL-SLADENKIIIGGSGAIPALVDLLENGT-PR 470
Query: 292 GILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLP-SLDPDCLQLALCILDALSSLPEG 350
G + L ++C+ + + V G V LV++L S + AL IL L++ +
Sbjct: 471 GKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDA 530
Query: 351 KLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLV 410
K A+ ANT+P + +L + A +IL S+CK E+ + G L +
Sbjct: 531 KSAIVK-ANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIG-RLGAVVPLMDL 588
Query: 411 IQSGCNPVLKQRSAELLKL 429
++G K+++ LL+L
Sbjct: 589 SKNGTERG-KRKAISLLEL 606
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 191 (72.3 bits), Expect = 4.2e-28, Sum P(3) = 4.2e-28
Identities = 34/67 (50%), Positives = 45/67 (67%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
+P+ F CPISL+ M+ PV+LCTG TY+R++I +W G TCP TMQ L + PN+TL
Sbjct: 10 VPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTL 69
Query: 126 YHLIHTW 132
LI W
Sbjct: 70 QRLIEIW 76
Score = 190 (71.9 bits), Expect = 4.2e-28, Sum P(3) = 4.2e-28
Identities = 58/210 (27%), Positives = 112/210 (53%)
Query: 234 KVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGI 293
++S++V + G+VE KI+C L+E + + + + I L+ LM+ + + I
Sbjct: 197 RLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDGLITELMKSISKDSDLSLI 256
Query: 294 LPGLSLLRSICLLNEVRSLVVS---IGAVPQLV-ELLPSLDPDCLQLALCILDALSSLPE 349
LS L +I V+ ++ IG V +L+ + SL + L +L+ L+S E
Sbjct: 257 ESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLSVSVTEKCLKLLEILASTKE 316
Query: 350 GKLAL----KDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDA--GL 403
G+ + +C T+ V+ LM+VS T++A+++LWS+ + E+ + AV + G+
Sbjct: 317 GRSEICGGDGECLKTV---VKKLMKVSTAATEHAVTVLWSVSYLFKEDKALEAVTSVNGV 373
Query: 404 AAKLFLVIQSGCNPVLKQRSAELLKLCSLN 433
K+ L++QS C+P +++ +LLK+ +N
Sbjct: 374 T-KILLLLQSNCSPAVRRMLTDLLKVFKVN 402
Score = 59 (25.8 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 40/168 (23%), Positives = 72/168 (42%)
Query: 173 LHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGS---EAVGVLVNLTLDSESKTNL 229
L + A A ++ + + G LI+ L+ + + S ++ L+ ++ K NL
Sbjct: 219 LLEFIAVDAESKLLIAERDG--LITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNL 276
Query: 230 MQPAKVS----LLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVK 285
++ + LL D + SV C +L+E L K+ R EI L +VK
Sbjct: 277 LREKLIGDVTKLLSDSTSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGEC--LKTVVK 334
Query: 286 N--KRHPNGILPGLSLLRSIC-LLNEVRSL--VVSIGAVPQLVELLPS 328
K +++L S+ L E ++L V S+ V +++ LL S
Sbjct: 335 KLMKVSTAATEHAVTVLWSVSYLFKEDKALEAVTSVNGVTKILLLLQS 382
Score = 40 (19.1 bits), Expect = 4.2e-28, Sum P(3) = 4.2e-28
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 235 VSLLVDMLNEGSVET 249
V LLVD++N+ ET
Sbjct: 143 VKLLVDLINQVDFET 157
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 312 (114.9 bits), Expect = 4.5e-26, P = 4.5e-26
Identities = 103/386 (26%), Positives = 180/386 (46%)
Query: 54 LKKMIAELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQE 113
+ K I + +P F+CPI+LE M DPV + TGQTYE+ +I KWF G TCP T QE
Sbjct: 278 INKAITKSTSLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQE 337
Query: 114 LWDDSVTPNKTLYHLIHTWFSQKYLLM--KKRSEDVQGRASELLGTLKKVKGQARVQ--- 168
L S+ PN L +LI W + + K+ S D Q + + L + ++++
Sbjct: 338 LDHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQR 397
Query: 169 -ALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKT 227
++K++ +A + R + + G + L+ LL + + AV L+NL++D +K
Sbjct: 398 RSVKQMRLLARENPENRVLIANAGAIPLLVQLLS-YPDSGIQENAVTTLLNLSIDEVNKK 456
Query: 228 NLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNK 287
+ + ++++L G+ E + N + L + + I S+ G+ LV
Sbjct: 457 LISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSN----GIPPLVDLL 512
Query: 288 RHPN--GILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALS 345
+H G L+ L ++ L + + + G V L+ LL + + AL IL L+
Sbjct: 513 QHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLA 572
Query: 346 SLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAA 405
S PEG+ A+ + I V + + + + A S+L + AA+ G+
Sbjct: 573 SHPEGRQAIGQLS-FIETLVEFIRQGTPKNKECATSVLLELGS-NNSSFILAALQFGVYE 630
Query: 406 KLFLVIQSGCNPVLKQRSAELLKLCS 431
L + SG N ++ +A L++L S
Sbjct: 631 YLVEITTSGTNRAQRKANA-LIQLIS 655
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 309 (113.8 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 105/379 (27%), Positives = 172/379 (45%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CPISLE M+DPV + +GQTYER+ I KW G TCP T Q L ++TPN L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 126 YHLIHTWFSQKYLLMKK-----RSEDVQGRAS--------ELLGTLKKVKGQARVQALKE 172
LI W + K R V +S +L+ L + + A E
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGE 375
Query: 173 LHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQP 232
+ +A +A R + + G + L+ LL S + +V L+NL++ +K ++
Sbjct: 376 IRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSR-IQEHSVTALLNLSICENNKGAIVSA 434
Query: 233 AKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNG 292
+ +V +L +GS+E + N + L D + + + L+ L+ N+ G
Sbjct: 435 GAIPGIVQVLKKGSMEARENAAATLFSL-SVIDENKVTIGALGAIPPLVVLL-NEGTQRG 492
Query: 293 ILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKL 352
+ L ++C+ + + G +P L LL + AL IL LSS PEGK
Sbjct: 493 KKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGK- 551
Query: 353 ALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLVIQ 412
A+ ++ +P+ V + S + A ++L +C P+ A GL L +
Sbjct: 552 AIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQ-KLGLMGPLIDLAG 610
Query: 413 SGCNPVLKQRSAELLKLCS 431
+G + K+++A+LL+ S
Sbjct: 611 NGTDRG-KRKAAQLLERIS 628
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 193 (73.0 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 46/128 (35%), Positives = 73/128 (57%)
Query: 65 EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKW-FSLGRYTCPTTMQELWDDSVTPNK 123
EIPS F+CPISL+ M+DPV + TG TY+R +I KW FS + +CP T Q + + +TPN
Sbjct: 6 EIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNH 65
Query: 124 TLYHLIHTW--FSQKYLLMKKRSEDVQGRASELLGTLKKVKGQA--RVQALKELHQIAAA 179
TL LI +W + Y + + + SE+ +K+ +V+ LK L QI +
Sbjct: 66 TLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVSE 125
Query: 180 HASARKTM 187
+ + ++ +
Sbjct: 126 NTTNKRCL 133
Score = 167 (63.8 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 58/236 (24%), Positives = 110/236 (46%)
Query: 204 TSHAVGSEAVGVLVNLTLDSESKTNLMQPAK----VSLLVDMLNEGSVETKINCTRLIEK 259
+S ++ EA+ VL +L + +L+ K V L ++ G E++ L++K
Sbjct: 180 SSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKK 239
Query: 260 LMEEKDFRPEIVSSHRLLIG-LMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGA 318
L+E D +I+ R L G +++++ ++ + +L C R V G
Sbjct: 240 LLEVAD-PMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGT 298
Query: 319 VPQLVELLP----SLDPDCLQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSED 374
+ ++ELL S + ++A+ +LD L EG+ + I + ++RVS+
Sbjct: 299 ISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQI 358
Query: 375 CTQYALSILWSICKI-APEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELLKL 429
++ A+ +L S+ + A + G+ AKL LV+Q C K+++ ELLKL
Sbjct: 359 TSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKL 414
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 301 (111.0 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 104/384 (27%), Positives = 174/384 (45%)
Query: 62 DLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTP 121
D IP F+CPISLE M+DP + TGQTYERS I +W G +CP T Q+L + ++TP
Sbjct: 239 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTP 298
Query: 122 NKTLYHLIHTWFSQKYL-----LMKKRSEDVQGRASELLGTLK-------KVKGQA---R 166
N L LI W ++ + M R+++ G +L G + K+ Q+ R
Sbjct: 299 NYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDR 358
Query: 167 VQALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESK 226
A+ E+ ++ R + + G + ++ LL AV ++NL++ +K
Sbjct: 359 RTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNK 418
Query: 227 TNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKN 286
+M V+ +V +L GS+E + N + L D I+ + ++ L+ L++
Sbjct: 419 ELIMLAGAVTSIVLVLRAGSMEARENAAATLFSL-SLADENKIIIGASGAIMALVDLLQY 477
Query: 287 KRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCL-QLALCILDALS 345
G + L ++C+ + V G V LV++L + + AL IL L+
Sbjct: 478 GS-VRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLA 536
Query: 346 SLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAA 405
S K A+ AN IP + L + + A +IL +CK E+ S G
Sbjct: 537 SNQVAKTAILR-ANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIG-RLGAVV 594
Query: 406 KLFLVIQSGCNPVLKQRSAELLKL 429
L + + G K+++ LL+L
Sbjct: 595 PLMELSRDGTERA-KRKANSLLEL 617
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 291 (107.5 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 101/388 (26%), Positives = 174/388 (44%)
Query: 60 ELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSV 119
E+++ IPS F CPIS E M+DPV + +G TY+R NI KWF G TCP T L
Sbjct: 28 EVEIT-IPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQ 86
Query: 120 TPNKTLYHLIHTWFSQKY-----LLMKKRSEDVQGRASELLGTLKKV--KGQ--ARVQAL 170
PN T+ +I W + R + SE+ L +G A ++ +
Sbjct: 87 IPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMV 146
Query: 171 KELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGS----EAVGVLV-NLTLDSES 225
++ ++ RK + + G ++ F+ +A S E V VL L + E
Sbjct: 147 TKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLPIGLEG 206
Query: 226 KTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRL--LIGLMR- 282
++ L + + LV++L G N LI++L+E + H L + G+
Sbjct: 207 QSKLTTTSSFNRLVELLRNGDQ----NAAFLIKELLELN-----VTHVHALTKINGVQEA 257
Query: 283 LVKNKRHPNGILPGLSLLRSICLLN-EVRSLVVSIGAVPQLVELLPSLDPDCLQLALCIL 341
+K+ + + L + + L N E S + + V VE+L + + AL +L
Sbjct: 258 FMKSINRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENSVCEKALTVL 317
Query: 342 DALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDA 401
+ + EG+ ++ IP V+ ++++SE + +S++W +CK A+
Sbjct: 318 NVICETKEGREKVRRNKLVIPILVKKILKISEK--KDLVSVMWKVCKSGDGSEVEEALRL 375
Query: 402 GLAAKLFLVIQSGCNPVLKQRSAELLKL 429
G KL +++Q GC K++ ELLK+
Sbjct: 376 GAFKKLVVMLQVGCGEGTKEKVTELLKM 403
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 286 (105.7 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 87/312 (27%), Positives = 158/312 (50%)
Query: 150 RASELLGTLKKVKGQA----RVQAL---KELHQIAAAHASARKTMVDEGGVALISSLLGP 202
+AS + GT V+ +A R++ L E +++ A +AR+ +V L + +
Sbjct: 110 QASAITGTHVSVRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVR----ILFADIETT 165
Query: 203 FTSHAVGSEAVGVLVNLTL-DSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLM 261
S + SE++ +LV L + ++E + P++V + +L + S+E ++N LIE ++
Sbjct: 166 SLSSELVSESLALLVLLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVL 225
Query: 262 ---EEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGILP-GLSLLRSICLLNEVRSLVVSIG 317
+ D + I S + G++ L+KN L G+ + ++CL+ + R L +S G
Sbjct: 226 TGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAG 285
Query: 318 AVPQLVELLPSLDPDC-LQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCT 376
A L++ L + C + L ++ L LPEG A + A T+P V+ ++RVS+ T
Sbjct: 286 APGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRAT 345
Query: 377 QYALSILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELLKLCSLNYTD 436
+YA L ++C A E C A AGL +L L++QS C K+++ LLKL ++ D
Sbjct: 346 EYAAGALLALCT-AEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPD 404
Query: 437 TTFISKCKLTRT 448
+ + R+
Sbjct: 405 DSTVHSDDFNRS 416
Score = 232 (86.7 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 68/220 (30%), Positives = 110/220 (50%)
Query: 61 LDLA-EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSV 119
LDL +IP F CPISL+ M DPVT+ TGQTY+R++I W ++G TCP T L D ++
Sbjct: 8 LDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTL 67
Query: 120 TPNKTLYHLIHTWFS-------QKYLLMKKRSEDVQGR-----ASELLGTLKKVKGQARV 167
PN TL LI W ++ K+ ++ + R AS + GT V+ +R
Sbjct: 68 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVR--SRA 125
Query: 168 QALKELHQIAAAHASARKTMVDEGG-VALISSLLGPFTSHAVGSEAVG----VLVNLTL- 221
A++ L +A R + L+ L + ++ SE V +LV L +
Sbjct: 126 AAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMT 185
Query: 222 DSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLM 261
++E + P++V + +L + S+E ++N LIE ++
Sbjct: 186 ETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVL 225
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 273 (101.2 bits), Expect = 8.1e-22, P = 8.1e-22
Identities = 83/295 (28%), Positives = 145/295 (49%)
Query: 150 RASELLGTLKKVKGQARVQALKELHQIAAAHASARKTMVDEGGVA-LISSLLGPFTSHAV 208
+AS + GT V+ +R AL+ L A R + LI L TS +
Sbjct: 111 QASAITGTHVSVR--SRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSEL 168
Query: 209 GSEAVGVLVNLTLDSESK-TNLMQ-PAKVSLLVDMLNEGSVETKINCTRLIEKLM---EE 263
SE++ +LV L + ++ ++ P +V L +L + S+ET++N LIE + +
Sbjct: 169 VSESLALLVMLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKS 228
Query: 264 KDFRPEIVSSHRLLIGLMRLVKNKRHPNGILP-GLSLLRSICLLNEVRSLVVSIGAVPQL 322
D + I +S + G++ L++N L G+ L ++C + R + ++ GA L
Sbjct: 229 ADLKGSISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEIL 288
Query: 323 VELLPSLDPDC-LQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALS 381
++ L + C + AL ++ L PEG A + A T+P V+ ++RVS+ T+YA
Sbjct: 289 IDRLAADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAG 348
Query: 382 ILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELLKLCSLNYTD 436
L ++C A E A AG+ +L L++QS C K+++ +LLKL ++ D
Sbjct: 349 ALLALCT-AEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPD 402
Score = 261 (96.9 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 77/222 (34%), Positives = 112/222 (50%)
Query: 54 LKKMIAELDLA-EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYT-CPTTM 111
+ + I LDL +IP F CPISLE MQDPVT+CTGQTY+R++I W S+G T CP T
Sbjct: 1 MPRNIEPLDLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTR 60
Query: 112 QELWDDSVTPNKTLYHLIHTWF------SQKYLLMKKRSED------VQGRASELLGTLK 159
L D ++ PN TL LI W + + K+ D + +AS + GT
Sbjct: 61 APLSDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHV 120
Query: 160 KVKGQARVQALKELHQIAAAHASARKTMVDEGGVA-LISSLLGPFTSHAVGSEAVGVLVN 218
V+ +R AL+ L A R + LI L TS + SE++ +LV
Sbjct: 121 SVR--SRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVM 178
Query: 219 LTLDSESK-TNLMQ-PAKVSLLVDMLNEGSVETKINCTRLIE 258
L + ++ ++ P +V L +L + S+ET++N LIE
Sbjct: 179 LPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIE 220
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 170 (64.9 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 71/285 (24%), Positives = 131/285 (45%)
Query: 146 DVQGRASELLGTLKKVKGQARVQALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTS 205
+V+ + +L+ LK + QA EL +A + R + + G + L+ LL T
Sbjct: 541 EVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYS-TD 599
Query: 206 HAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKD 265
A AV L+NL+++ +K + + L+ +L GS E K N + L ++
Sbjct: 600 SATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEE 659
Query: 266 FRPEIVSSHRLLIG-LMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVE 324
+ +I S IG L+ L+ N P G + L ++ + E ++++V GAV L++
Sbjct: 660 NKIKIGQSGA--IGPLVDLLGNGT-PRGKKDAATALFNLSIHQENKAMIVQSGAVRYLID 716
Query: 325 LLPSLDPDC--LQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSI 382
L+ DP + A+ +L L+++PEG+ A+ IP V ++ S + A +
Sbjct: 717 LM---DPAAGMVDKAVAVLANLATIPEGRNAIGQ-EGGIPLLVEVVELGSARGKENAAAA 772
Query: 383 LWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELL 427
L + + C+ + G L + QSG P ++++ LL
Sbjct: 773 LLQLSTNSGRFCNMV-LQEGAVPPLVALSQSG-TPRAREKAQALL 815
Score = 164 (62.8 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 37/83 (44%), Positives = 48/83 (57%)
Query: 50 ERLDLKKMIAELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPT 109
ERL L K +A I + F CP+SLE M DPV + +GQTYE++ I +W LG CP
Sbjct: 218 ERLLLIKQTQTSSVA-ILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPK 276
Query: 110 TMQELWDDSVTPNKTLYHLIHTW 132
T Q L ++ PN T+ LI W
Sbjct: 277 TRQTLTHTTLIPNYTVKALIANW 299
Score = 49 (22.3 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 29/125 (23%), Positives = 52/125 (41%)
Query: 307 NEVRSLVVSIGA-VPQLVELLPSLDPDCLQLALCILDALSSLP-EGKLALKDCANTIPNT 364
NE R + + V +LVE L S D + A L L+ + ++ + + + I
Sbjct: 533 NETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGN-SGAIVLL 591
Query: 365 VRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSA 424
V LL + A++ L ++ + A DAG L V+++G + + +A
Sbjct: 592 VELLYSTDSATQENAVTALLNLS--INDNNKKAIADAGAIEPLIHVLENGSSEAKENSAA 649
Query: 425 ELLKL 429
L L
Sbjct: 650 TLFSL 654
Score = 46 (21.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 184 RKTMVDEGGVALISSLLGPFTSHAVGSE-AVGVLVNLTLDSESKTNL-MQPAKVSLLVDM 241
R + EGG+ L+ ++ A G E A L+ L+ +S N+ +Q V LV +
Sbjct: 742 RNAIGQEGGIPLLVEVVE--LGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVAL 799
Query: 242 LNEGSVETKINCTRLIEKLMEEK 264
G+ + L+ ++
Sbjct: 800 SQSGTPRAREKAQALLSYFRNQR 822
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 161 (61.7 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 70/278 (25%), Positives = 127/278 (45%)
Query: 153 ELLGTLKKVKGQARVQALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSE- 211
+L+ LK + + A E+ + R + G + + SLL ++ + E
Sbjct: 476 KLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLL--YSEEKLTQEH 533
Query: 212 AVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIV 271
AV L+NL++ +K +++ + LV +LN G+ K N + L + R I
Sbjct: 534 AVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIG 593
Query: 272 SSHRLLIGLMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDP 331
S+ + L+ L+ K G S L ++ + ++ ++ +V AV LVELL DP
Sbjct: 594 QSNAAIQALVNLL-GKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL---DP 649
Query: 332 DC--LQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKI 389
D + A+ +L LS++ EG+ A+ IP V + S+ + A S+L +C
Sbjct: 650 DLEMVDKAVALLANLSAVGEGRQAIVR-EGGIPLLVETVDLGSQRGKENAASVLLQLCLN 708
Query: 390 APEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELL 427
+P+ C+ + G L + QSG K+++ +LL
Sbjct: 709 SPKFCT-LVLQEGAIPPLVALSQSGTQRA-KEKAQQLL 744
Score = 153 (58.9 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CP+S E M DPV + +GQT++R++I KW G CP T Q L + PN T+
Sbjct: 238 IPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTV 297
Query: 126 YHLIHTW 132
+I +W
Sbjct: 298 KAMIASW 304
Score = 38 (18.4 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 406 KLFLVIQSGCNPVLKQRSAELLKLCSLNYTDTTFISKC 443
KL ++SG N V +AE+ L + + I +C
Sbjct: 476 KLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRC 513
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 251 (93.4 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 95/398 (23%), Positives = 175/398 (43%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CPIS++ M+DPV + TG TY+R +I W + G TCP T L PN T+
Sbjct: 31 IPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTI 90
Query: 126 YHLIHTWFSQKY--LLMKKRSEDVQGRASELLGTLKKVKGQARVQ-------ALKELHQI 176
+I W +K L+ + + V E+ +K+ R ++++ ++
Sbjct: 91 RKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIKKL 150
Query: 177 AAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVN-----LT----LDSESKT 227
RK V+E V + L F + G E + ++N LT + E +
Sbjct: 151 GDESEKNRKC-VNENSVGWV--LCDCFDKFS-GDEKLTFMLNEILSLLTWMFPIGLEGIS 206
Query: 228 NLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVS-SHRLLIGLMRLVKN 286
L + +L + N ++++++ + R + + + L++L+++
Sbjct: 207 KLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEALVKLIRD 266
Query: 287 KRHPNGILPGLSLLRSICLLN-EVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALS 345
+ L + + L E+ S + IG V VE++ + + AL +LDA+
Sbjct: 267 SVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKALAVLDAIC 326
Query: 346 SLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAA 405
G+ ++ A +P V+ + +VSE T+ ++S++ + K AV G
Sbjct: 327 ETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTVAVEDAVRLGAFQ 386
Query: 406 KLFLVIQSGCNPVLKQRSAELLKLCSLNYTDTTFISKC 443
K+ LV+Q G K+++ ELLK+ +N T +S C
Sbjct: 387 KVLLVLQVGYGEETKEKATELLKM--MN-TQMKLMSDC 421
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 247 (92.0 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 92/346 (26%), Positives = 157/346 (45%)
Query: 65 EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDS-VTPNK 123
++P+ F CPISLE M DPV L +G T++R +I +W G TCP T L + + PN
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNH 63
Query: 124 TLYHLIHTWFSQKYLLMKKR----SEDVQGRASELLGTL--KKVKGQARVQALKELHQIA 177
L LI F+ L R E ++ L+ TL + +++++L L ++
Sbjct: 64 ALRSLILN-FAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLT 122
Query: 178 AAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSL 237
+S R+ + + G V + + + +++ +L+NL+L+ ++K L+ +
Sbjct: 123 KRDSSIRRKVTESGAVRAALDCVDS-CNQVLQEKSLSLLLNLSLEDDNKVGLVADGVIRR 181
Query: 238 LVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVS---SHRLLIGLMRLVKNKRHPNGIL 294
+V +L GS + K L+ L + + I S + L+ L+R V N R
Sbjct: 182 IVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLR-VGNDRERK--- 237
Query: 295 PGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKLAL 354
+ L ++C + R VV G+VP LVE S L+ A+ +L L G+ +
Sbjct: 238 ESATALYALCSFPDNRKRVVDCGSVPILVEAADS----GLERAVEVLGLLVKCRGGREEM 293
Query: 355 KDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVD 400
+ + V +L + QY+L IL +C CS VD
Sbjct: 294 SKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCC-----CSGEIVD 334
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 153 (58.9 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 66/292 (22%), Positives = 142/292 (48%)
Query: 144 SEDVQGRASELLGTLKKVKGQARVQALKELHQIAAAHASARKTMVD--EGGVALISSLLG 201
S ++ +L+ LK + +A + +I A +++ + ++ E +L+S L
Sbjct: 416 SSSIETEVKKLIDDLKSSSLDTQREATARI-RILARNSTDNRIVIARCEAIPSLVSLLYS 474
Query: 202 PFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNEGSVE-TKINCTRLIEKL 260
T + ++AV L+NL+++ +K+ + + + L+ +L G +E K N + L
Sbjct: 475 --TDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSL 532
Query: 261 MEEKDFRPEIVSSHRL--LIGLMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGA 318
++++ EI + + L+ L+ +G + L ++ + +E ++ V+ GA
Sbjct: 533 SVIEEYKTEIGEAGAIEPLVDLL----GSGSLSGKKDAATALFNLSIHHENKTKVIEAGA 588
Query: 319 VPQLVELLPSLDP--DCLQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCT 376
V LVEL+ DP ++ A+ +L L+++ EGK+A+ + IP V ++ S
Sbjct: 589 VRYLVELM---DPAFGMVEKAVVVLANLATVREGKIAIGE-EGGIPVLVEVVELGSARGK 644
Query: 377 QYALSILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELLK 428
+ A + L +C +P+ C++ + G+ L + +SG K+++ LLK
Sbjct: 645 ENATAALLQLCTHSPKFCNNV-IREGVIPPLVALTKSGTARG-KEKAQNLLK 694
Score = 151 (58.2 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 33/81 (40%), Positives = 47/81 (58%)
Query: 53 DLKKMIAELDL-AEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTM 111
D+K+ A+L +PS F C +SLE M DPV + +GQT+ER I KW +G CP T
Sbjct: 228 DIKQ--AQLRCPVRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTR 285
Query: 112 QELWDDSVTPNKTLYHLIHTW 132
Q L ++TPN + + +W
Sbjct: 286 QALSHTTLTPNFIVRAFLASW 306
Score = 80 (33.2 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 31/130 (23%), Positives = 54/130 (41%)
Query: 131 TWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAAAHASARKTMVDE 190
T FS + K G L+ L + A L ++ H + K +++
Sbjct: 528 TLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTK-VIEA 586
Query: 191 GGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNEGSVETK 250
G V + L+ P + + +AV VL NL E K + + + +LV+++ GS K
Sbjct: 587 GAVRYLVELMDP--AFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGK 644
Query: 251 INCTRLIEKL 260
N T + +L
Sbjct: 645 ENATAALLQL 654
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 220 (82.5 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 89/368 (24%), Positives = 165/368 (44%)
Query: 64 AEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNK 123
A IP+ F CPI+LE M+DPV + TGQTY+R +I W G TCP T Q L S+ PN+
Sbjct: 272 ANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNR 331
Query: 124 TLYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQAR--VQALK---------E 172
L +LI W + + + D G + ++ K ++ L E
Sbjct: 332 ALKNLIVLWCRDQKIPFELYG-DGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNGVVFE 390
Query: 173 LHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQP 232
L +A + AR + + G + + L ++ AV ++NL++ ++KT +M+
Sbjct: 391 LRALAKSDTVARACIAEAGAIPKLVRYLAT-ECPSLQINAVTTILNLSILEQNKTRIMET 449
Query: 233 -AKVSLLVDMLNEGSV-ETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHP 290
++ ++++L G+ E K N + L +R + R++ GL+ L K
Sbjct: 450 DGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTS 509
Query: 291 NGILPGLSLLRSICLLNEVRSLVVS--IGAVPQLVELLPSLDPDCLQLALCILDALSSLP 348
+ +++L + V V + +GA + LP + A+ +++A+ +
Sbjct: 510 SKRDALVAILNLVAERENVGRFVEAGVMGAAGDAFQELP-------EEAVAVVEAV--VR 560
Query: 349 EGKLALKDCANTIPNTVRLLMRVSEDCT-QYALSILWSICKIAPEEC-SSAAVDAGLAAK 406
G L A ++ + +MR D T + A + L ++C+ E + A G+
Sbjct: 561 RGGLMAVSAAFSLIRLLGEVMREGADTTRESAAATLVTMCRKGGSELVAEMAAIPGIERV 620
Query: 407 LFLVIQSG 414
++ +I +G
Sbjct: 621 IWEMIGAG 628
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 217 (81.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 79/277 (28%), Positives = 136/277 (49%)
Query: 53 DLKKMIAELDLAEIPSVFV----CPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCP 108
D +K E DL + S+ V CPISLE M DPV L +G TY+RS+I KWF+ G TCP
Sbjct: 261 DEEKDKEEDDLMMVRSLNVDDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCP 320
Query: 109 TTMQELWDDSVTPNKTLYHLIHTWFSQKYLLM----KKRSEDVQGRASELLGTL------ 158
T + L + N ++ +I ++ Q ++M KK+ + + A+E G L
Sbjct: 321 KTGKTLVSTVLVDNFSVKQVIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLA 380
Query: 159 -KKVKG--QARVQALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGV 215
+ +KG + V+AL E+ + R +V+ G V + +L + A+
Sbjct: 381 GELIKGDEEEMVKALVEIRILTKTSTFYRSCLVEAGVVESLMKILRS-DDPRIQENAMAG 439
Query: 216 LVNLTLDSESKTNLM--QPAKVSLLVDMLNEGSV-ETKINCTRLIEKLMEEKDFRPEIVS 272
++NL+ D KT ++ + L+V++LN+G+ E++ + L D+ I
Sbjct: 440 IMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGE 499
Query: 273 SHRLLIGLMRLVKNKRHPNGILPG-LSLLRSICLLNE 308
+ GL+R+VK+ + + L +RS+ L+N+
Sbjct: 500 ISDAIPGLVRIVKSCDYGDSAKRNALIAIRSL-LMNQ 535
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 167 (63.8 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 35/69 (50%), Positives = 42/69 (60%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLY 126
P CPISL+ M DPV + +GQTYER I KWFS G TCP T Q+L +TPN +
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 127 HLIHTWFSQ 135
LI +W Q
Sbjct: 340 ALISSWCEQ 348
Score = 96 (38.9 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 67/300 (22%), Positives = 121/300 (40%)
Query: 150 RASELLGTLKKVKG-QARVQALKELHQIAAAHASARKTMVDEGGVALISSLLGP-FTSHA 207
R +ELL TL V + + + ++++ + AR M + G V + LG +
Sbjct: 422 RCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARILMGENGCVEALLQFLGSALNENN 481
Query: 208 VGSEAVGV--LVNLTLDSESKTNLMQPAKV-SLLVDMLNEGSVETKINCTRLIEKLMEEK 264
++ VG L NL +D+ LM + + LL +ML + L +EE
Sbjct: 482 ASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHSHGSVTAIYLNLSCLEEA 541
Query: 265 DFRPEIVSSHRLLIGLM-RLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLV 323
+P I SS L + M L+ + + L L + ++S V L
Sbjct: 542 --KPVIGSS--LAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQ 597
Query: 324 ELLPSLDPDCLQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSIL 383
L S + + +L +L L GK + + + N +L + + A+S+L
Sbjct: 598 SLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLL 657
Query: 384 WSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELLKLC-SLNYTDTTFISK 442
+C + E CS + G+ L + +G ++R+ +LL L L D T +++
Sbjct: 658 LILCNHS-EICSEMVLQEGVIPSLVSISVNGTQRG-RERAQKLLTLFRELRQRDQTHLTE 715
Score = 55 (24.4 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 35/173 (20%), Positives = 71/173 (41%)
Query: 224 ESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRL 283
E + L++ LL + + ++ K I L+++ + ++ + + L++
Sbjct: 414 EDQVTLVERC-TELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARILMGENGCVEALLQF 472
Query: 284 VK---NKRHPNGILPGLSLLRSICL-LNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALC 339
+ N+ + + G L ++ + N + L+++ G +P L E+L +P
Sbjct: 473 LGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEML--CNPHSHGSVTA 530
Query: 340 ILDALSSLPEGKLALKDCANTIPNTVRLLMRVSE-DCTQYALSILWSICKIAP 391
I LS L E K + +P V LL +E C AL L+ + P
Sbjct: 531 IYLNLSCLEEAKPVIGSSL-AVPFMVNLLWTETEVQCKVDALHSLFHLSTYPP 582
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 173 (66.0 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 36/69 (52%), Positives = 43/69 (62%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLY 126
P CPISL+ M DPV + +GQTYER I KWFS G TCP T Q+L S+TPN +
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 127 HLIHTWFSQ 135
LI +W Q
Sbjct: 333 GLIASWCEQ 341
Score = 89 (36.4 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 46/161 (28%), Positives = 76/161 (47%)
Query: 276 LLIGLMRLVK---NKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPS-LDP 331
L G++RL++ + +G L L S CL +E +S++ S AVP LV+LL ++
Sbjct: 509 LTSGVIRLLEKMISSAESHGSATALYLNLS-CL-DEAKSVIGSSQAVPFLVQLLQKEIET 566
Query: 332 DCLQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDC-TQYALSILWSICKIA 390
C AL L LS+ AL +N I + LL E+ + +L++L ++ +
Sbjct: 567 QCKLDALHALYNLSTYSPNIPALLS-SNIIKSLQGLLASTGENLWIEKSLAVLLNLAS-S 624
Query: 391 PEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELLKLCS 431
E A G+ + L V+ G +Q + LL LC+
Sbjct: 625 QEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCN 665
Score = 79 (32.9 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 40/173 (23%), Positives = 78/173 (45%)
Query: 173 LHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQP 232
L +A + ++ M+ G + L+ ++ SH GS A + +NL+ E+K+ +
Sbjct: 494 LFNLAVNNNRNKELMLTSGVIRLLEKMISSAESH--GS-ATALYLNLSCLDEAKSVIGSS 550
Query: 233 AKVSLLVDMLNEGSVET--KINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHP 290
V LV +L + +ET K++ + L P ++SS+ ++ L L+ +
Sbjct: 551 QAVPFLVQLLQK-EIETQCKLDALHALYNLSTYSPNIPALLSSN-IIKSLQGLLASTGEN 608
Query: 291 NGILPGLSLLRSICLLNEVRSLVVSI-GAVPQLVELLPSLDPDCLQLAL-CIL 341
I L++L ++ E + VS G + L +L D + A+ C+L
Sbjct: 609 LWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLL 661
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 201 (75.8 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 106/387 (27%), Positives = 169/387 (43%)
Query: 60 ELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFS----LGRY-TCPTTMQEL 114
E + I F+CP++ E M DPVTL G+T+ER I KWF GR +CP T QEL
Sbjct: 17 ERGVDHIYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQEL 76
Query: 115 WDDSVTPNKTLYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELH 174
V+ + L + I W S+ D+ R S LG + +QAL +
Sbjct: 77 TSTDVSASIALRNTIEEWRSRN----DAAKLDI-ARQSLFLGNAET----DILQALMHVR 127
Query: 175 QIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVL-VNLTLDSESKTNLMQPA 233
QI S R + + + +I +L TSH V +A+ L V + D ESK + +
Sbjct: 128 QICRTIRSNRHGVRNSQLIHMIIDMLKS-TSHRVRYKALQTLQVVVEGDDESKAIVAEGD 186
Query: 234 KVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGI 293
V LV L+ + + L+ +L + + +I S H LI L+ L + I
Sbjct: 187 TVRTLVKFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSI 246
Query: 294 LPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKLA 353
+ R++ + +V + + +L LL L + L + L LP
Sbjct: 247 VEKAD--RTLENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDV 304
Query: 354 LKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAA-VDAGLAAKLFL-VI 411
A T+ +++ LMR S D Q + L ++ KI+ E S+ + G+ L +
Sbjct: 305 KVLVAQTVGSSLVDLMR-SGDMPQREAA-LKALNKISSFEGSAKVLISKGILPPLIKDLF 362
Query: 412 QSGCN--PV-LKQRSAELL-KLCSLNY 434
G N P+ LK+ SA +L + ++ Y
Sbjct: 363 YVGPNNLPIRLKEVSATILANIVNIGY 389
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 150 (57.9 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 59/264 (22%), Positives = 124/264 (46%)
Query: 168 QALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKT 227
Q L L ++ + R ++ + ++ + SLL + V + A +VNL+L+ ++K
Sbjct: 253 QGLILLRKMTRSSEDLRVSLCTDRILSFLRSLLVS-RYNLVQTNAAASVVNLSLEKQNKV 311
Query: 228 NLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNK 287
+++ V LL+D+L G+ E + + + L E D ++ + L+ +++
Sbjct: 312 KIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALE-DENKMVIGVLGAVEPLLHALRSS 370
Query: 288 RHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSL 347
L + L+ R+ +V GAVP L+ ++ S D L +L L++
Sbjct: 371 ESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRS--GDSTSRILLVLCNLAAC 428
Query: 348 PEGKLALKDCANTIPNTVRLLMRV----SEDCTQYALSILWSICKIAPEECSSAAVDAGL 403
P+GK A+ D N + V L V SE + +++L ++C+ A +AG
Sbjct: 429 PDGKGAMLD-GNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQ-GNLRFRGLASEAG- 485
Query: 404 AAKLFLVIQSGCNPVLKQRSAELL 427
A ++ + ++ N +K++++++L
Sbjct: 486 AEEVLMEVEENGNERVKEKASKIL 509
Score = 93 (37.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 65 EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDD--SVTPN 122
E P F+CPI+ M DPV + +GQT+ER ++ +LG Y P + D +V PN
Sbjct: 30 ETPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLG-YI-PDLLDGTRPDLSTVIPN 87
Query: 123 KTLYHLIHTW 132
+ I +W
Sbjct: 88 LAMKSTIFSW 97
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 192 (72.6 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 81/351 (23%), Positives = 157/351 (44%)
Query: 51 RLDLKKMIAELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTT 110
+++ K +++ E+P F+C +S + M +P+ + +GQT+E+S IL+W R TCP T
Sbjct: 50 KIESKNPESDISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHER-TCPRT 108
Query: 111 MQELWDDSVTPNKTLYHLIHTWFSQKYLLMKKRSEDVQGR-ASELLGTLKKVKGQARVQ- 168
Q L+ + PN + +I W K S++V +L L+++ + V+
Sbjct: 109 KQVLYHRFMIPNHLINEVIKEWCLIHNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVED 168
Query: 169 ---ALKELHQIAAAHASARKTMVDEGGVALISSLLGPFT----SHAVGSEAVGVLVNLTL 221
A KEL A +S V + + I+ LL P + S+ E + +++
Sbjct: 169 QTEAAKELALKAKRFSSVCVYFVAKIPDS-ITRLLTPLSISEDSNPEFLENIVTALHIFS 227
Query: 222 DSESKTNLM--QPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIG 279
SE L+ P + LL + +G+V T+I+ + L D I+ + +L
Sbjct: 228 TSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSL-SYTDSNKIIIGNSEVLKA 286
Query: 280 LMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALC 339
L+ +++ + S L ++C + E+ VS G + ++ + + + + L
Sbjct: 287 LIHVIE-EGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKA--GSNVSMLLS 343
Query: 340 ILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCT--QYALSILWSICK 388
+L +S+ D I + +L R S + A+ I+++ICK
Sbjct: 344 LLAFVSTQNHQTTEEMDNLGLIYDLFSIL-RNSNSLVNDENAVVIVYNICK 393
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 190 (71.9 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 78/284 (27%), Positives = 127/284 (44%)
Query: 54 LKKMIAELDLA--EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTM 111
++ I E D++ E+P F+C +S M +PV + +GQTYE+ I +W R TCP T
Sbjct: 58 VESKIPESDISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKHER-TCPKTK 116
Query: 112 QELWDDSVTPNKTLYHLIHTW-FSQKYLLMKKRSEDVQGR-ASELLGTLKKVKGQA---- 165
Q L PN + LI W KY K E V S++ L++V +
Sbjct: 117 QVLSHRLWIPNHLISDLITQWCLVNKYDHQKPSDELVAELFTSDIEALLQRVSSSSSVAD 176
Query: 166 RVQALKELHQIAAAHASARKTMVDEGGVA-LISSLLGPFTS--HAVGSEA------VGVL 216
+++A KEL + R V G+ I+ LL P ++ AV S V L
Sbjct: 177 QIEAAKELRHQTKKFPNVRVFFV--AGIHDSITRLLSPLSTLDEAVDSSLELQENIVTAL 234
Query: 217 VNLTLDSESKTNLMQPAKV-SLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHR 275
NL++ +KT + + V LL L +G+ ET+ N + L D I+ +
Sbjct: 235 FNLSILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSL-SAIDSNKIIIGNSE 293
Query: 276 LLIGLMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAV 319
+ L+ L++ + S + ++C++ E + VVS G +
Sbjct: 294 AVKALIDLIE-EGDLLATKEATSTVFNLCIVLENKGKVVSAGLI 336
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 65/209 (31%), Positives = 103/209 (49%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
+P FVCPISL+ M DPV + TGQTY+R++I +W G TCP T Q L D + PN+ L
Sbjct: 305 VPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRAL 364
Query: 126 YHLIHTWFSQKYLLMKKRSEDVQGRA-SELLGTLKKVKG-QARVQALKELHQIAAAHASA 183
+LI W + + + D + + L T V+ +A V L + +A +A
Sbjct: 365 KNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSIL--IKYLADGSQAA 422
Query: 184 RKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVDMLN 243
+ E + L++ G + A +EA G + +L S+ + Q V+ ++++
Sbjct: 423 QTVAARE--IRLLAKT-GK-ENRAYIAEA-GAIPHLCRLLTSENAIAQENSVTAMLNL-- 475
Query: 244 EGSVETKINCTRLIEKLMEEKDFRPEIVS 272
S+ K N +R+ MEE D IVS
Sbjct: 476 --SIYEK-NKSRI----MEEGDCLESIVS 497
>TAIR|locus:2075457 [details] [associations]
symbol:AT3G02840 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0051707 "response to
other organism" evidence=ISS] [GO:0010193 "response to ozone"
evidence=IEP] [GO:0005634 "nucleus" evidence=IDA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR016024 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010193 EMBL:AC018363 UniGene:At.41071
UniGene:At.48613 EMBL:BT002533 EMBL:BT008474 EMBL:AK118550
IPI:IPI00547655 RefSeq:NP_566184.1 ProteinModelPortal:Q9M8S5
STRING:Q9M8S5 EnsemblPlants:AT3G02840.1 GeneID:821225
KEGG:ath:AT3G02840 TAIR:At3g02840 OMA:RESVEGW PhylomeDB:Q9M8S5
ProtClustDB:CLSN2917076 ArrayExpress:Q9M8S5 Genevestigator:Q9M8S5
Uniprot:Q9M8S5
Length = 379
Score = 181 (68.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 64/277 (23%), Positives = 132/277 (47%)
Query: 167 VQALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVG-----SEAVGVLVN-LT 220
++ + ++ + + +K +V G V +SS F + G E + VL + L
Sbjct: 75 LEIVSKIKNLGRGGDTNKKCLVQNGSVLALSSCFERFAAARDGHMRLLEEILFVLSSWLP 134
Query: 221 LD-SESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLME-EKDFRPEIVSSHRLLI 278
L+ SE + A ++ LV LN +T+ N I +++ +K + +
Sbjct: 135 LNRSEGFNKMGSTASLNCLVRFLNGKDAKTRQNAAFCIREVIAVDKRYVYALTDVEGACE 194
Query: 279 GLMRLVKNKRHPNGILPGLSLL-RSICLLNEVRSLVVSIGAVPQLVELLPS-LDPDCLQL 336
GL++++++ + L ++ R+I +++ V +G V + E++ + + +
Sbjct: 195 GLVKIIRDSVSTSSTKASLMVIYRAISSNDKITEKFVKLGLVELITEMMVNNAEKSVCER 254
Query: 337 ALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPE-ECS 395
+L +L+A +GK + A +P V+ ++RVS+ TQ ++SILW + K + EC
Sbjct: 255 SLVVLNATCDNEQGKEDVLRNALIVPLLVKKILRVSDLATQCSVSILWKLWKNKKDGECD 314
Query: 396 SA----AVDAGLAAKLFLVIQSGCNPVLKQRSAELLK 428
A+ G KL +++Q GC K++++ELL+
Sbjct: 315 DRLLVEALQVGAFEKLLVLLQVGCEDKTKEKASELLR 351
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 185 (70.2 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 58/202 (28%), Positives = 94/202 (46%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
+P F CPISL+ M+DPV TGQTY+R +I++W G TCP + Q L D + PN+ L
Sbjct: 297 VPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRAL 356
Query: 126 YHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAAA---HAS 182
LI W Y L E +G A E + +A ++A K +I S
Sbjct: 357 RSLISQWCGV-YGLQYDSPESNEGMA-ECVAA--SCSSRAAMEANKATARILVRMLEDGS 412
Query: 183 ARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSE--SKTNLMQPAKVSLLVD 240
V + L++ + A+ +L L L ++ ++ N + A ++L +
Sbjct: 413 ENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAVT-ALLNLSIF 471
Query: 241 MLNEGSVETKINCTRLIEKLME 262
N+G + + C RLI +++
Sbjct: 472 EPNKGRIMEQEGCLRLIVGVLQ 493
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 183 (69.5 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 100/390 (25%), Positives = 178/390 (45%)
Query: 60 ELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGR-----YTCPTTMQEL 114
E + I F+CP++ + M +PVTL GQT+ER I KWF R +CP T +EL
Sbjct: 19 EPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKEL 78
Query: 115 WDDSVTPNKTLYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELH 174
++P+ L + I W ++ L D+ R S LG + + ALK +
Sbjct: 79 SITDLSPSIALRNTIEEWRARNDALKL----DI-ARQSLYLGNAET----NILLALKNVR 129
Query: 175 QIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVL-VNLTLDSESKTNLMQPA 233
+I R+ + + V LI+ +L +SH V +A+ L V + D ESK + +
Sbjct: 130 EICRNIRKIRQRVCNPQLVRLITDMLKS-SSHEVRCKALQTLQVVVEGDEESKAIVAEGD 188
Query: 234 KVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNK-RHPNG 292
V +V L++ + + ++ +L + + +I S H +I L+ L +K + +
Sbjct: 189 TVRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVST 248
Query: 293 ILPGLSLLRSICLLNE-VRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGK 351
+ L ++ E VR + ++ P L +LL + +A L L+ + K
Sbjct: 249 VEKADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAF-YLGVLALNNDVK 307
Query: 352 LALKDCANTIPNTVRLLMRVSEDCTQY--ALSILWSICKIAPEECSSAAVDAGLAAKLFL 409
+ + A T+ +++ LMR + D +Q AL L +I E + ++ G+ L
Sbjct: 308 VIV---AQTVGSSLIDLMR-TRDMSQREAALGALNNISSF--EGSAKLLINTGILPPLIK 361
Query: 410 -VIQSGCN--PV-LKQRSAELL-KLCSLNY 434
+ G N P+ LK+ SA +L + ++ Y
Sbjct: 362 DLFYVGPNQLPIRLKEVSATILANIVNIGY 391
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 137 (53.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 66/259 (25%), Positives = 124/259 (47%)
Query: 123 KTLYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAAAHAS 182
+TL H HT+FS + E + + LK + + Q L + ++ +
Sbjct: 207 ETLTH--HTFFSNSTSTATEEDEVIYNK-------LKSSEIFDQEQGLIMMRKMTRTNDE 257
Query: 183 ARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVDML 242
AR ++ ++L+ +++ S V + A+ LVNL+LD ++K +++ V +L+D+L
Sbjct: 258 ARVSLCSPRILSLLKNMIVSRYS-LVQTNALASLVNLSLDKKNKLTIVRLGFVPILIDVL 316
Query: 243 NEGSVETKINCTRLIEKLMEEKDFRPEI--VSSHRLLIGLMRLVKNKRHPNGILPGLSLL 300
GS E + + I L E D + I + + + L+ +R ++ R + L+L
Sbjct: 317 KSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTRHD--SALALY 374
Query: 301 RSICLLNEV-RSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKLALKDCAN 359
LN+ RS +V +GAVP L ++ S + AL ++ L+ EG+ A+ D AN
Sbjct: 375 H--LTLNQTNRSKLVRLGAVPALFSMVRS--GESASRALLVICNLACCSEGRSAMLD-AN 429
Query: 360 TIPNTV-RLLMRVSEDCTQ 377
+ V +L +E+ T+
Sbjct: 430 AVAILVGKLREEWTEEPTE 448
Score = 88 (36.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDD--SVTPNKT 124
P F+CPIS M DPV + +GQT+ER + L +E D ++ PN
Sbjct: 34 PVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFIPKLNDDEESLPDFSNIIPNLN 93
Query: 125 LYHLIHTW 132
+ I TW
Sbjct: 94 MKSTIDTW 101
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 177 (67.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 56/185 (30%), Positives = 84/185 (45%)
Query: 61 LDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVT 120
L+ P F CP+S E M+DPV L +GQTY++ I KW S G TCP T Q L ++T
Sbjct: 69 LETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALT 128
Query: 121 PNKTLYHLIHTWFSQKYLLMKKR------SED--VQGRASELLGTLK-KVKG---QARVQ 168
PN + +I W + L K + +ED V E+ +L KV Q +
Sbjct: 129 PNLLIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKS 188
Query: 169 ALKELHQIAAAHASARKTMVDEGG--VALISSLL-GPFTSHAVGSEAVGVLVNLTLDSES 225
A KEL + R + L++ LL G + + V L+N+++ +S
Sbjct: 189 AAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDS 248
Query: 226 KTNLM 230
L+
Sbjct: 249 NKKLV 253
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 168 (64.2 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 35/69 (50%), Positives = 43/69 (62%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLY 126
P CPISL+ M DPV + +GQTYER I KWFS G +CP T Q+L S+TPN +
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 127 HLIHTWFSQ 135
LI +W Q
Sbjct: 336 GLIASWCEQ 344
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 59/234 (25%), Positives = 107/234 (45%)
Query: 71 VCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLYHLIH 130
+CPISLE M DPV + TG TY+RS+I KWF G TCP T + L + N ++ +I
Sbjct: 293 LCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIR 352
Query: 131 TWFSQKYLLM------KKRSEDVQGRASELLGTLKKVK----------GQARVQALKELH 174
+++ +K +DV + G K + G+ +
Sbjct: 353 KHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVREI 412
Query: 175 QIAAAHASARKTMVDEGGVALISSLLGPFTSH--AVGSEAVGVLVNLTLDSESKTNLMQP 232
++ +S ++ + + G ++ LL +S + A+ ++NL+ K+ +
Sbjct: 413 RVQTKTSSFNRSCLVKAGA--VTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAGE 470
Query: 233 AKVSLLVDMLNEGS-VETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVK 285
+ +LV++LNEG+ ET++ + L +D+ I + + GLM +VK
Sbjct: 471 G-LKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVK 523
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 63/275 (22%), Positives = 120/275 (43%)
Query: 168 QALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKT 227
+A++E+ + R +V G V + LL + G+L NL+ K+
Sbjct: 407 RAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGIL-NLSKHVTGKS 465
Query: 228 NLMQPAKVSLLVDMLNEGS-VETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKN 286
+ + +LV++LNEG+ ET++ + L +D+ I + + GLM +VK
Sbjct: 466 KIAGEG-LKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKG 524
Query: 287 KRHPNGIL-PGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPS------LDPDCLQLALC 339
+ + L + + + ++ V++ GAVP L++LL S L DCL
Sbjct: 525 DDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCL----A 580
Query: 340 ILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCT----QYALSILWSICKIAPEECS 395
L L+ P+G + + + V++L SED Q+ + ++ ++C +
Sbjct: 581 TLAKLAEYPDGTIGVIRRGG-LKLAVKILSS-SEDSPVAVKQHCVGLILNLCLNGGRDVV 638
Query: 396 SAAVDAGLA-AKLFLVIQSGCNPVLKQRSAELLKL 429
V L L+ V+ +G K+ SA L+++
Sbjct: 639 GVLVKNSLVMGSLYTVLSNGEYGGSKKASA-LIRM 672
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 141 (54.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 34/89 (38%), Positives = 48/89 (53%)
Query: 52 LDLKKMIAELDLA--EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPT 109
++ KK E D + E+P F C +S M DPV + +GQTYE+ I +W + TCPT
Sbjct: 58 VESKKRKRESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNHD-LTCPT 116
Query: 110 TMQELWDDSVTPNKTLYHLIHTW-FSQKY 137
Q L+ +TPN + LI W + KY
Sbjct: 117 AKQVLYRVCLTPNHLINELITRWCLANKY 145
Score = 62 (26.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 27/114 (23%), Positives = 49/114 (42%)
Query: 213 VGVLVNLTLDSESKTNLMQPAKV-SLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIV 271
V L N++ ++KT L + +V LL + +GSV T+ N T + L + D I+
Sbjct: 237 VTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASL-SDIDSNKIII 295
Query: 272 SSHRLLIGLMRLVKNKRHPNGILPGLSLLRSICL-LNEVRSLVVSIGAVPQLVE 324
+ L L+ L+ + L + +C E +S+G P ++
Sbjct: 296 GNSVALKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAIK 349
>TAIR|locus:1005716696 [details] [associations]
symbol:AT1G08315 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 SMART:SM00185 EMBL:CP002684
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
UniGene:At.42266 UniGene:At.48169 EMBL:AK229288 IPI:IPI00546916
RefSeq:NP_849613.1 ProteinModelPortal:Q0WNZ8 SMR:Q0WNZ8
PRIDE:Q0WNZ8 EnsemblPlants:AT1G08315.1 GeneID:837352
KEGG:ath:AT1G08315 TAIR:At1g08315 eggNOG:NOG245502
InParanoid:Q0WNZ8 OMA:VAQVAGC PhylomeDB:Q0WNZ8
ProtClustDB:CLSN2690788 Genevestigator:Q0WNZ8 Uniprot:Q0WNZ8
Length = 325
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 61/265 (23%), Positives = 115/265 (43%)
Query: 152 SELLGTLKKVKGQARVQALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSE 211
S ++ L V Q R AL EL I+ +R + D G + ++ L +SH+
Sbjct: 10 STIVSRLSSVSEQTRAAALAELRLISKQDPDSRLIIADAGAIPYLAETLYS-SSHSSQEN 68
Query: 212 AVGVLVNLTLDSE----SKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFR 267
A L+NL++ S S L+ +L + + + L+ E+ +R
Sbjct: 69 AAATLLNLSITSREPLMSSRGLLDALSHALRHHDTTTSPAAVQSSAATIYSLLIAEESYR 128
Query: 268 PEIVSSHRLLIGLMRLVKNK-RHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELL 326
P I S ++ L+ +++ HP I L L +I L RS ++S+GA+P L L+
Sbjct: 129 PIIGSKRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALYPMNRSTMISLGAIPALFSLI 188
Query: 327 PSLDPDC--LQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSI-- 382
D C ++ A ++ ++ + + ++ + N + L+ + CT +L I
Sbjct: 189 VK-DSRCGIVEDATAVMAQVAGCEDSEDGMRRVSGA--NVLADLL---DPCTGSSLRIKE 242
Query: 383 --LWSICKIAPEECSSAAVDAGLAA 405
+ ++ +A C AA + +AA
Sbjct: 243 NSVGALLNLA--RCGGAAARSEVAA 265
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 143 (55.4 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 58/262 (22%), Positives = 119/262 (45%)
Query: 168 QALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKT 227
QA E+ ++ R + G + + SL+ + + V ++NL+L E+K
Sbjct: 80 QAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISS-SDLQLQEYGVTAVLNLSLCDENKE 138
Query: 228 NLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNK 287
++ V LV+ L G+ TK N + +L + ++ + I S + + L+ L++N
Sbjct: 139 MIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEENKITIGRSGAIPL-LVNLLENG 197
Query: 288 RHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSL 347
+ L S+C NE ++ V G + LVEL+ + D + + +++ L S
Sbjct: 198 GF-RAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMVDKSAFVMNLLMSA 256
Query: 348 PEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKL 407
PE K A+ + +P V ++ ++ + ++SIL +C+ + + A + G L
Sbjct: 257 PESKPAVVE-EGGVPVLVEIVEAGTQRQKEISVSILLQLCEESVVYRTMVARE-GAVPPL 314
Query: 408 FLVIQSGCNPVLKQRSAELLKL 429
+ Q + K ++ L++L
Sbjct: 315 VALSQGSASRGAKVKAEALIEL 336
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 145 (56.1 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 70/288 (24%), Positives = 121/288 (42%)
Query: 145 EDVQGRASELLGTLKKVKGQARVQALKELHQIAAAHASARKTMVDEGGVALISSLL---G 201
ED+Q + L+ + A +L +A A R + + G + + LL
Sbjct: 179 EDLQPTVKLCIDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCND 238
Query: 202 PFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNEGSVETKIN--CTRLIEK 259
P+T AV L+NL+L ++K + + LV +L G+ +K N C L
Sbjct: 239 PWTQE----HAVTALLNLSLHDQNKAVIAAGGAIKSLVWVLKTGTETSKQNAACALLSLA 294
Query: 260 LMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAV 319
L+EE + + + L+ L+ N G L+ L +C L + + V+ GAV
Sbjct: 295 LLEENKGS---IGACGAIPPLVSLLLNGSC-RGKKDALTTLYKLCTLQQNKERAVTAGAV 350
Query: 320 PQLVELLPSLDPDCLQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYA 379
LV+L+ + A+ +L +L+++ +GK A+ + I V + S ++A
Sbjct: 351 KPLVDLVAEEGTGMAEKAMVVLSSLAAIDDGKEAIVE-EGGIAALVEAIEDGSVKGKEFA 409
Query: 380 LSILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELL 427
+ L +C + V G L + QSG V +R AE L
Sbjct: 410 ILTLLQLCSDSVRN-RGLLVREGAIPPLVGLSQSGSVSVRAKRKAERL 456
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 83/337 (24%), Positives = 152/337 (45%)
Query: 65 EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKT 124
EIP+ F+CPIS M DP+ + +G +YER+ ++ +LG +T PT + +V PN
Sbjct: 57 EIPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLG-FT-PTPPPDF--STVIPNLA 112
Query: 125 LYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQAR---------VQALKELHQ 175
L IH+W ++ K A +L+ L + K Q R +QA+++
Sbjct: 113 LKSAIHSWCERRCFPPPKPLNSAA--AEKLILALMEKKPQRRKVSVSEKELIQAIRDKPS 170
Query: 176 IAAAHASAR--------KTMVDEGGVALISSLLG----P--FTSHAVGSEAVGVLVNLTL 221
+ HA+ + DE +A S L P F+S + G E + NLT
Sbjct: 171 VRLNHAATELDRRPNYFNSSSDES-IASSSRTLQLTTKPSCFSSPSSG-EIESLEPNLTP 228
Query: 222 DSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLM 281
+ E+ ++ ++S + E + + TR I++ ++S+ + LI +
Sbjct: 229 EEEALLTKLKSNRIS----EIEEALISIR-RITR-IDESSRISLCTTRVISALKSLI-VS 281
Query: 282 RLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCIL 341
R + + +L LSL +S N+V+ +V G VP L+++L + + + ++
Sbjct: 282 RYATVQVNVTAVLVNLSLEKS----NKVK--IVRSGIVPPLIDVLKCGSVEAQEHSAGVI 335
Query: 342 DALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQY 378
+L+ E K A+ P + L+RV + T++
Sbjct: 336 FSLALEDENKTAIGVLGGLEP--LLHLIRVGTELTRH 370
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 53 DLKKMIAELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQ 112
+L+ + L +EIP F+CPI+ E M+DP+ G +YE+ + W S + T P T
Sbjct: 391 ELRTKVKTLS-SEIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNL 449
Query: 113 ELWDDSVTPNKTLYHLIHTWFSQKY 137
L +TPN+TL I W S+ +
Sbjct: 450 VLSSVILTPNRTLKMAIDRWLSETH 474
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 53 DLKKMIAELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQ 112
+L+ + L +EIP F+CPI+ E M+DP+ G +YE+ + W S + T P T
Sbjct: 392 ELRTKVKTLS-SEIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNL 450
Query: 113 ELWDDSVTPNKTLYHLIHTWFSQKY 137
L +TPN+TL I W S+ +
Sbjct: 451 VLSSVILTPNRTLKMAIDRWLSETH 475
>DICTYBASE|DDB_G0293266 [details] [associations]
symbol:gxcY "armadillo repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] Pfam:PF00169 InterPro:IPR000225
InterPro:IPR000219 InterPro:IPR001849 InterPro:IPR016024
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 PROSITE:PS50176
SMART:SM00185 SMART:SM00233 SMART:SM00325 dictyBase:DDB_G0293266
GenomeReviews:CM000155_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 EMBL:AAFI02000200 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 GO:GO:0035023 RefSeq:XP_629210.1
ProteinModelPortal:Q54C56 EnsemblProtists:DDB0233471 GeneID:8629089
KEGG:ddi:DDB_G0293266 eggNOG:NOG328307 InParanoid:Q54C56
OMA:CLRILIN Uniprot:Q54C56
Length = 1076
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 40/160 (25%), Positives = 80/160 (50%)
Query: 173 LHQIAAAHASARKTMVDEGGV-ALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQ 231
+H + H R+ + G + L++ L P T + + + +L+NL+L E++ ++Q
Sbjct: 212 IHVLTIYHPLIRRILAISGILNQLVTLLSSPSTPLPIKEQTIKILINLSLTEETERPILQ 271
Query: 232 PAKVSLLVDM---LNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNK- 287
+ LVD+ ++ ++E K C + L D R +++ S+ L+ GL L+K+K
Sbjct: 272 AGAIMPLVDIVVSISSTTIELKSLCVSCLANLTSNADIR-KVLRSNYLIDGLSELLKDKP 330
Query: 288 RHPNGILPGLSLL-RSICLLNEVRSLVVSIGAVPQLVELL 326
H + +L +SLL ++C+ R + L+EL+
Sbjct: 331 NHTSQLLEAISLLIANLCIDEHCRFKISQSDCGRDLIELI 370
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 91/381 (23%), Positives = 159/381 (41%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
+P F C +S M DPV + +G T+ER I KWF G +CP + ++L D ++ PN L
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVEL 278
Query: 126 YHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAAAHASARK 185
I W ++ L DVQ A K VK + + A+ S+
Sbjct: 279 KSQISEWCAKNGL-------DVQDPAR------KHVKASNSIDFSVSI----ASFGSSLY 321
Query: 186 TMVDEGGVALI---SSLLGPFTSHAVGSEAVGVLVNLT-LDSESKTNLMQPAKVSLLVDM 241
+ D G+++ SS +S++ S+ G + +DS S + + +D
Sbjct: 322 NIPDHSGISITDFNSSYSIDSSSYSKMSKG-GYFTPMQRIDSASGAGDTDSSHSEIEIDP 380
Query: 242 L---NEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNG-----I 293
L + +I + E +S + L L+ +KN NG I
Sbjct: 381 LCGLTNLPWDAQIKVVEDVRSRFEHSTRAFRSMSPSKFLEPLITYLKNALERNGTAGEII 440
Query: 294 LPGLSLLRSICLLNEVRSLVVSIGA-VPQLVELLPSLDPDCL-QLALCILDALSSLPEGK 351
GL LL + L+ R + S+ V ++ + L+ + + + AL IL+ LS+ P G
Sbjct: 441 KGGLDLL--LAFLSGNRRAIESLEEEVFKMFSVF--LESEVVAEEALNILEVLSNHPHGP 496
Query: 352 LALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLVI 411
+ + ++ + ++++ +E + A+ L ++ + E C V KL +
Sbjct: 497 SKITS-SGSLSSLLKIVESQAEHLQEQAMITLKNLSS-SMEICLEM-VSLDFIQKLTSFL 553
Query: 412 QSGCNPVLKQRSAELLK-LCS 431
Q V + S +LK LCS
Sbjct: 554 QQ---KVFCKHSIIILKNLCS 571
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 31/81 (38%), Positives = 39/81 (48%)
Query: 53 DLKKMIAELDL-AEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTM 111
+L+K ++ D E P F+CPISLE M+DP G TYE I W G T P T
Sbjct: 311 ELRKEVSRSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTN 370
Query: 112 QELWDDSVTPNKTLYHLIHTW 132
+L + PN L I W
Sbjct: 371 TKLHHTKLVPNLALRSAIQEW 391
>TAIR|locus:2157358 [details] [associations]
symbol:AT5G50900 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 SMART:SM00185 EMBL:CP002688 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AB017063 EMBL:BT020588
EMBL:BT033035 IPI:IPI00519624 RefSeq:NP_199903.1 UniGene:At.25502
ProteinModelPortal:Q9FI58 SMR:Q9FI58 PRIDE:Q9FI58
EnsemblPlants:AT5G50900.1 GeneID:835162 KEGG:ath:AT5G50900
TAIR:At5g50900 InParanoid:Q9FI58 OMA:NFVEENA PhylomeDB:Q9FI58
ProtClustDB:CLSN2687203 Genevestigator:Q9FI58 Uniprot:Q9FI58
Length = 555
Score = 137 (53.3 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 55/199 (27%), Positives = 95/199 (47%)
Query: 152 SELLGTLKKVKGQARVQALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSE 211
+ LL L+ G A+ +A L ++ + +AR + GG ISSLL + GS+
Sbjct: 232 NHLLRVLESGSGFAKEKACVALQALSLSKENAR-AIGCRGG---ISSLLEICQGGSPGSQ 287
Query: 212 A--VGVLVNLTLDSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLME-EKDFRP 268
A GVL NL L E+K N ++ + +L+ M++ G+ + N + L ++D
Sbjct: 288 AFAAGVLRNLALFGETKENFVEENAIFVLISMVSSGTSLAQENAVGCLANLTSGDEDLMI 347
Query: 269 EIVSSHRLLIGLMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPS 328
+V + L + + G+ LL+++ L VR +V+S G +P+LV P
Sbjct: 348 SVVREGGIQC-LKSFWDSVSSVKSLEVGVVLLKNLALCPIVREVVISEGFIPRLV---PV 403
Query: 329 LDPDCLQLALCILDALSSL 347
L L + + +A+SSL
Sbjct: 404 LSCGVLGVRIAAAEAVSSL 422
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 136 (52.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 33/86 (38%), Positives = 42/86 (48%)
Query: 51 RLDLKKMIAELDLAEI----PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYT 106
R + K I EL + + P F+CPI+ E M+DPV G +YER I W S T
Sbjct: 398 RSKVMKKIEELKMVPVYNGTPDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRT 457
Query: 107 CPTTMQELWDDSVTPNKTLYHLIHTW 132
P T L +TPN+TL I W
Sbjct: 458 SPMTNLPLQTTLLTPNRTLKMAIFRW 483
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/210 (27%), Positives = 96/210 (45%)
Query: 212 AVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIV 271
A L NL +++E+K +++ + L++ + +VE + N I L D + +I
Sbjct: 105 ACAALGNLAVNNENKLLIVEMGGLEPLINQMMGDNVEVQCNAVGCITNLATRDDNKHKIA 164
Query: 272 SSHRLLIGLMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDP 331
+S L I L +L K+K H L ++ E R +V+ GAVP LV LL S DP
Sbjct: 165 TSGAL-IPLTKLAKSK-HIRVQRNATGALLNMTHSEENRKELVNAGAVPVLVSLLSSTDP 222
Query: 332 DCLQLALCILDALSSLPEGKLALKDCANTIPNTV-RLLMRVSEDCTQYALSILWSICKIA 390
D +Q C ALS++ + K A T P V +L+ + ++ ++ +A
Sbjct: 223 D-VQY-YCTT-ALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRNLA 279
Query: 391 PEECSSAA-VDAGLAAKLFLVIQSGCNPVL 419
+ V AG L +IQS P++
Sbjct: 280 SDTSYQLEIVRAGGLPHLVKLIQSDSIPLV 309
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/80 (36%), Positives = 43/80 (53%)
Query: 53 DLKKMIAELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQ 112
+L+ + L + IP F+CPI+ E M+DPV G +YE+ + W S + T P T
Sbjct: 392 ELRTKVKSLS-SGIPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNL 450
Query: 113 ELWDDSVTPNKTLYHLIHTW 132
L +TPN+TL I+ W
Sbjct: 451 VLPSAVLTPNRTLKMAINRW 470
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 132 (51.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 64 AEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNK 123
+ +P+ F+CPIS+E M+DP G TYE I WF G P T L + ++ PN+
Sbjct: 433 SSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNR 492
Query: 124 TLYHLIHTWFSQK 136
L IH + Q+
Sbjct: 493 VLRSFIHGYLQQQ 505
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 130 (50.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 28/75 (37%), Positives = 36/75 (48%)
Query: 65 EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKT 124
E P F+CPI+ + M+DP G TYE I +WF G T P + L S+ PN
Sbjct: 352 EPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLA 411
Query: 125 LYHLIHTWFSQKYLL 139
L I W + LL
Sbjct: 412 LRSAIQEWLQLRELL 426
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 54 LKKMIAELD-LAE-IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTM 111
++++ A++D L+ IP F+CPI+ E M+DPV G +YER + W + T P T
Sbjct: 388 IEELRAKMDSLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTN 447
Query: 112 QELWDDSVTPNKTLYHLIHTW 132
L +TPN+TL I+ W
Sbjct: 448 LALPSLVLTPNRTLKMAINRW 468
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 64/296 (21%), Positives = 126/296 (42%)
Query: 138 LLMKKRSEDVQGRASELLGTLKKVKG-QARVQALKELHQIAAAHASARKTMVDEGGVALI 196
LL+ SE+ + L+ L + QA E+ ++ R + G + +
Sbjct: 51 LLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPL 110
Query: 197 SSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRL 256
SL+ + + V ++NL+L E+K ++ + LV L G+ K N
Sbjct: 111 ISLISS-SDLQLQEYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAACA 169
Query: 257 IEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGILP---GLSLLRSICLLNEVRSLV 313
+ +L + ++ + I S G + L+ N G + L S+C E +
Sbjct: 170 LLRLSQIEENKVAIGRS-----GAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRA 224
Query: 314 VSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSE 373
V G + LVEL+ + + + ++ L S+PE K A+ + +P V ++ ++
Sbjct: 225 VQSGIMKPLVELMADFGSNMVDKSAFVMSLLMSVPESKPAIVE-EGGVPVLVEIVEVGTQ 283
Query: 374 DCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELLKL 429
+ A+SIL +C+ + + A + G L + Q+G + KQ++ L++L
Sbjct: 284 RQKEMAVSILLQLCEESVVYRTMVARE-GAIPPLVALSQAGTSRA-KQKAEALIEL 337
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 126 (49.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 70 FVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLYHLI 129
F CPIS+E M+DP G TYE KW G T P T + L + ++ PN TL +I
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIII 296
Query: 130 HTWFSQ 135
W +
Sbjct: 297 KDWLEK 302
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 128 (50.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 53 DLKKMIAELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQ 112
+L+ + + +A +P F+CPI+ E M+DPV G +YE+ + W S R + P T
Sbjct: 392 ELRMKMVSVPVA-VPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNL 450
Query: 113 ELWDDSVTPNKTLYHLIHTW 132
L +TPN+TL I W
Sbjct: 451 PLPSLVLTPNRTLKMAISRW 470
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 129 (50.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLY 126
PS F+CPIS E M++P G TYE ++ +W G T P T +L +++ PN L
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 127 HLIHTWFSQ 135
I W +
Sbjct: 558 SAIQEWLQR 566
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 127 (49.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F+CPI+ E M+DPV G +YER + W + T P T L +TPN+TL
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTL 463
Query: 126 YHLIHTW 132
I+ W
Sbjct: 464 KMAINRW 470
>TAIR|locus:2144261 [details] [associations]
symbol:AT5G11550 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL163815 EMBL:BT002981 EMBL:BT004426
IPI:IPI00544497 PIR:T48514 RefSeq:NP_196716.1 UniGene:At.32242
ProteinModelPortal:Q9LYD7 SMR:Q9LYD7 IntAct:Q9LYD7 PRIDE:Q9LYD7
EnsemblPlants:AT5G11550.1 GeneID:831027 KEGG:ath:AT5G11550
TAIR:At5g11550 eggNOG:NOG235459 HOGENOM:HOG000241582
InParanoid:Q9LYD7 OMA:VEGMAGR PhylomeDB:Q9LYD7
ProtClustDB:CLSN2686626 ArrayExpress:Q9LYD7 Genevestigator:Q9LYD7
Uniprot:Q9LYD7
Length = 314
Score = 124 (48.7 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 56/211 (26%), Positives = 96/211 (45%)
Query: 227 TNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMR-LVK 285
T L + +++ L L S K+ +L+E+++ P+ S GLMR LV
Sbjct: 96 TTLQETFQIAEL--HLTSVSESDKLLALQLLERVVV-----PDPPSDPTCPPGLMRGLVS 148
Query: 286 NKRHPNGILPG---LSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILD 342
R N I+ +L ++CL R + V GA +VE L+ ++ AL L+
Sbjct: 149 CLRSNNKIVTAKYVTKILLALCLAEGNRHVAVEAGAARAVVETAAGLEISAVERALAALE 208
Query: 343 ALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSA---AV 399
+ + EG ++ A T+P V ++ R++ +YA+SIL + E S AV
Sbjct: 209 LMCTTAEGAAEVRAHAMTVPAMVAVMARLAGRGREYAISILSVVYGKGGEGGDSGEEIAV 268
Query: 400 DAG--LAAKLFLVIQSGCNPVLKQRSAELLK 428
+A + L ++ C K++ A+LLK
Sbjct: 269 APAEEVARAVALALEGECTARGKRKGAQLLK 299
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 53 DLKKMIAELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQ 112
+L+ + L + IP F+CPI+ E M+DPV G +YE+ + W S + T P T
Sbjct: 392 ELRTKVKALS-SGIPDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNL 450
Query: 113 ELWDDSVTPNKTLYHLIHTW 132
L +TPN+TL I W
Sbjct: 451 ILPSMVLTPNRTLKMAISRW 470
>TAIR|locus:2038598 [details] [associations]
symbol:AT2G27430 "AT2G27430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY169003 EMBL:AY954802 IPI:IPI00540469
RefSeq:NP_180312.2 UniGene:At.38764 ProteinModelPortal:Q8GUS7
SMR:Q8GUS7 PRIDE:Q8GUS7 EnsemblPlants:AT2G27430.1 GeneID:817288
KEGG:ath:AT2G27430 TAIR:At2g27430 eggNOG:NOG235856
HOGENOM:HOG000241608 InParanoid:Q8GUS7 OMA:KNMEMIT PhylomeDB:Q8GUS7
ProtClustDB:CLSN2690947 Genevestigator:Q8GUS7 Uniprot:Q8GUS7
Length = 438
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 74/300 (24%), Positives = 130/300 (43%)
Query: 139 LMKKRSEDVQGRASELLGTLKKVK-G--QARVQALKELHQIAAAHASARKTMVDEGGVAL 195
++ K ED + L T+KK+ G + + +A E+ ++A RK M + G + +
Sbjct: 65 IVSKPPED-ENEEVVLQKTVKKIHFGSWEEKEKAAIEIEKLAREDKKTRKLMAELGVIQI 123
Query: 196 ISSLLGPFTS-HAVGSEAVGVLVNLTLDSESKTNLMQPAKV-SLLVDMLNEGSVETKINC 253
+ S++ S H AV L+ L+ + + LM A + S L + T+
Sbjct: 124 LVSMVASDVSGHQ--KAAVNALIQLSHGTYTNKALMVNADICSKLPKNVEVLDQSTRHAF 181
Query: 254 TRLIEKLMEEKDFRPEIVSSHRL--LIGLMRLVKNKRHPNGILPGLSLLRSICLLNEVRS 311
L+ L + + + SS L L+ M I L+ + ++CL+ E
Sbjct: 182 AELLLSLSSLTNTQLPVASSQILPFLMDTMNSDSTDMKTKEIC--LATISNLCLVLENAG 239
Query: 312 LVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRV 371
+V GAV L+ L+ + D + AL L L GK A++DC + +L
Sbjct: 240 PLVLNGAVETLLSLMST--KDLSEKALASLGKLVVTQMGKKAMEDCLLVSKGLIEIL--T 295
Query: 372 SED---CTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELLK 428
ED C +YA IL + + + A AG+ L V G +P++++R+ +LL+
Sbjct: 296 WEDIPKCQEYAAYILMVLAHQSWSQREKMA-KAGIVPVLLEVSLLG-SPLVQKRAVKLLQ 353
>CGD|CAL0001835 [details] [associations]
symbol:VAC8 species:5476 "Candida albicans" [GO:0000011
"vacuole inheritance" evidence=ISS;IMP] [GO:0030448 "hyphal growth"
evidence=IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0071563
"Myo2p-Vac17p-Vac8p transport complex" evidence=IEA] [GO:0071561
"nucleus-vacuole junction" evidence=IEA] [GO:0043495 "protein
anchor" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071562 "nucleus-vacuole junction assembly" evidence=IEA]
[GO:0071255 "CVT vesicle assembly" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185
CGD:CAL0001835 GO:GO:0005774 GO:GO:0071216 GO:GO:0036180
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011
GO:GO:0000324 GO:GO:0030448 eggNOG:NOG265712 KO:K08332
EMBL:AACQ01000222 EMBL:AACQ01000221 RefSeq:XP_710979.1
RefSeq:XP_710992.1 ProteinModelPortal:Q59MN0 STRING:Q59MN0
GeneID:3647410 GeneID:3647417 KEGG:cal:CaO19.745
KEGG:cal:CaO19.8364 PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 126 (49.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 50/167 (29%), Positives = 83/167 (49%)
Query: 212 AVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIV 271
A G L NL +++E+K +++ + L+ + ++E + N I L + D + +I
Sbjct: 107 ACGALGNLAVNTENKILIVEMGGLEPLIRQMMSTNIEVQCNAVGCITNLATQDDNKSKIA 166
Query: 272 SSHRLLIGLMRLVKNK-----RHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELL 326
S L I L +L K+K R+ G L L++ S E R +V+ GAVP LV LL
Sbjct: 167 KSGAL-IPLTKLAKSKDIRVQRNATGAL--LNMTHS----GENRQELVNAGAVPVLVSLL 219
Query: 327 PSLDPDCLQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSE 373
+ D D +Q C ALS++ ++ K A+T P V L+ + +
Sbjct: 220 SNEDAD-VQY-YCTT-ALSNIAVDEVNRKKLASTEPKLVGQLVHLMD 263
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 49/223 (21%), Positives = 97/223 (43%)
Query: 185 KTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNE 244
K+ + + G + + L V A G L+N+T E++ L+ V +LV +L+
Sbjct: 162 KSKIAKSGALIPLTKLAKSKDIRVQRNATGALLNMTHSGENRQELVNAGAVPVLVSLLSN 221
Query: 245 GSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGILPGLSLLRSIC 304
+ + CT + + ++ R ++ S+ L+G + + + P LR++
Sbjct: 222 EDADVQYYCTTALSNIAVDEVNRKKLASTEPKLVGQLVHLMDSPSPRVQCQATLALRNLA 281
Query: 305 LLNEVRSLVVSIGAVPQLVELLP-SLDPDCLQLALCILDALSSLPEGKLALKDCANTIPN 363
+ + +V G +P LV+LL + P L CI + +S P + + + P
Sbjct: 282 SDSGYQVEIVRAGGLPHLVQLLTCNHQPLVLAAVACIRN-ISIHPLNEALIIEAGFLKPL 340
Query: 364 TVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAK 406
L SE+ +A+S L ++ + E+ +A + AG K
Sbjct: 341 VGLLDYTDSEEIQCHAVSTLRNLAA-SSEKNRTALLAAGAVDK 382
Score = 40 (19.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 357 CANTIPNTVRLLMRVSEDCTQYALS 381
C N+ L RVS + QY L+
Sbjct: 436 CGNSAAALANLCSRVSNEHKQYILN 460
>UNIPROTKB|Q59MN0 [details] [associations]
symbol:VAC8 "Vacuolar protein 8" species:237561 "Candida
albicans SC5314" [GO:0000011 "vacuole inheritance"
evidence=ISS;IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185 CGD:CAL0001835
GO:GO:0005774 GO:GO:0071216 GO:GO:0036180 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011 GO:GO:0000324
GO:GO:0030448 eggNOG:NOG265712 KO:K08332 EMBL:AACQ01000222
EMBL:AACQ01000221 RefSeq:XP_710979.1 RefSeq:XP_710992.1
ProteinModelPortal:Q59MN0 STRING:Q59MN0 GeneID:3647410
GeneID:3647417 KEGG:cal:CaO19.745 KEGG:cal:CaO19.8364
PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 126 (49.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 50/167 (29%), Positives = 83/167 (49%)
Query: 212 AVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIV 271
A G L NL +++E+K +++ + L+ + ++E + N I L + D + +I
Sbjct: 107 ACGALGNLAVNTENKILIVEMGGLEPLIRQMMSTNIEVQCNAVGCITNLATQDDNKSKIA 166
Query: 272 SSHRLLIGLMRLVKNK-----RHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELL 326
S L I L +L K+K R+ G L L++ S E R +V+ GAVP LV LL
Sbjct: 167 KSGAL-IPLTKLAKSKDIRVQRNATGAL--LNMTHS----GENRQELVNAGAVPVLVSLL 219
Query: 327 PSLDPDCLQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSE 373
+ D D +Q C ALS++ ++ K A+T P V L+ + +
Sbjct: 220 SNEDAD-VQY-YCTT-ALSNIAVDEVNRKKLASTEPKLVGQLVHLMD 263
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 49/223 (21%), Positives = 97/223 (43%)
Query: 185 KTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNE 244
K+ + + G + + L V A G L+N+T E++ L+ V +LV +L+
Sbjct: 162 KSKIAKSGALIPLTKLAKSKDIRVQRNATGALLNMTHSGENRQELVNAGAVPVLVSLLSN 221
Query: 245 GSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGILPGLSLLRSIC 304
+ + CT + + ++ R ++ S+ L+G + + + P LR++
Sbjct: 222 EDADVQYYCTTALSNIAVDEVNRKKLASTEPKLVGQLVHLMDSPSPRVQCQATLALRNLA 281
Query: 305 LLNEVRSLVVSIGAVPQLVELLP-SLDPDCLQLALCILDALSSLPEGKLALKDCANTIPN 363
+ + +V G +P LV+LL + P L CI + +S P + + + P
Sbjct: 282 SDSGYQVEIVRAGGLPHLVQLLTCNHQPLVLAAVACIRN-ISIHPLNEALIIEAGFLKPL 340
Query: 364 TVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAK 406
L SE+ +A+S L ++ + E+ +A + AG K
Sbjct: 341 VGLLDYTDSEEIQCHAVSTLRNLAA-SSEKNRTALLAAGAVDK 382
Score = 40 (19.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 357 CANTIPNTVRLLMRVSEDCTQYALS 381
C N+ L RVS + QY L+
Sbjct: 436 CGNSAAALANLCSRVSNEHKQYILN 460
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLY 126
PS ++CPI E M+DP+ G TYE I +W + G T P T ++ D ++ PN L+
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 127 HLIHTWFSQ 135
I W +Q
Sbjct: 796 LAIQDWQNQ 804
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 28/75 (37%), Positives = 35/75 (46%)
Query: 64 AEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNK 123
A P+ + CPI E M+DP G TYER I +W + P T L +TPN
Sbjct: 706 ARAPTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNH 765
Query: 124 TLYHLIHTWFSQKYL 138
TL I W S+ L
Sbjct: 766 TLRSAIREWRSRSRL 780
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 25/71 (35%), Positives = 33/71 (46%)
Query: 65 EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKT 124
E P F+CPIS + MQ+P G TYE +W + G P T L + ++ PN
Sbjct: 293 EPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNLV 352
Query: 125 LYHLIHTWFSQ 135
L I W Q
Sbjct: 353 LRSAIKDWLQQ 363
>TAIR|locus:2040214 [details] [associations]
symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
Length = 468
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 63/326 (19%), Positives = 144/326 (44%)
Query: 116 DDSVTPNKTLYHLIHTWFSQKYLLMKKRSE--DVQGRASELLGTLKKVKGQA---RVQAL 170
+DS+ + L L++ + + KK+ E ++ R + L + + +A ++ A
Sbjct: 71 EDSMRKPEKLSDLLNLAVIESGVETKKKEETLEILKRVVKDLQAEAEAEAEAAEKKIAAA 130
Query: 171 KELHQIAAAHASARKTMVDEGGVA-LISSLLGPFTSHAVGSEAVGVLVNLTLDSE-SKTN 228
E+ +A AR T+ G + L+S + S ++ L+NL + ++ +K
Sbjct: 131 SEVRLLAKDDIEARVTLAMLGAIPPLVSMIDDESQSEDALIASLYALLNLGIGNDVNKAA 190
Query: 229 LMQPAKVSLLVDMLNEGSVETKINCTRLIEKLM--EEKDFRPEIVSSHRLLIGLMRLVKN 286
+++ V ++ ++ + ++ + D I+ S +I L++ +KN
Sbjct: 191 IVKAGVVHKMLKLVESSKPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLVKTLKN 250
Query: 287 KRHPNGILP---GLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDA 343
+ L L ++ + ++ S ++ +P L+ L D + + L IL
Sbjct: 251 FEETSSSQAREDALRALYNLSIYHQNVSFILETDLIPFLLNTLG--DMEVSERILAILTN 308
Query: 344 LSSLPEGKLALKDCANTIPNTVRLL-MRVSEDCTQYALSILWSICKIAPEECSSAAVDAG 402
+ S+PEG+ A+ + P V +L S C + A+ IL + + +A ++AG
Sbjct: 309 VVSVPEGRKAIGEVVEAFPILVDVLNWNDSIKCQEKAVYILMLMAHKGYGD-RNAMIEAG 367
Query: 403 LAAKLFLVIQSGCNPVLKQRSAELLK 428
+ + L + G +P+ ++R++ +L+
Sbjct: 368 IESSLLELTLVG-SPLAQKRASRVLE 392
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 119 (46.9 bits), Expect = 0.00094, P = 0.00094
Identities = 28/69 (40%), Positives = 35/69 (50%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLY 126
PS + CPI E M++P G TYER IL W + P T Q+L +TPN TL
Sbjct: 726 PSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNIS-PVTRQKLDHFKLTPNHTLR 784
Query: 127 HLIHTWFSQ 135
I W S+
Sbjct: 785 SAIRDWKSR 793
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 450 433 0.00087 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 70
No. of states in DFA: 617 (66 KB)
Total size of DFA: 252 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.16u 0.19s 35.35t Elapsed: 00:00:02
Total cpu time: 35.17u 0.19s 35.36t Elapsed: 00:00:02
Start: Fri May 10 05:08:10 2013 End: Fri May 10 05:08:12 2013