BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041252
(450 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/450 (75%), Positives = 387/450 (86%), Gaps = 2/450 (0%)
Query: 1 MPMFQPSKRDVLVGFEGSGDGQILDLDTAVKDGVLGGTVGAGVTGAGVGERLDLKKMIAE 60
MPMFQP KRD L+GFEG GDGQ+LDLDTAVKDGVL G V E+LDLKKMI E
Sbjct: 1 MPMFQPLKRDGLIGFEGGGDGQVLDLDTAVKDGVL--GGVNGGGVGVVDEKLDLKKMIKE 58
Query: 61 LDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVT 120
LDL +IPSVF+CPISLEPMQDPVTLCTGQTYER NI KWF+LG TCPTTMQELWDD+VT
Sbjct: 59 LDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVT 118
Query: 121 PNKTLYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAAAH 180
PNKTL+HLI+TWFSQKY+LMKKRSEDVQGRA E+LGTLKK KGQARV AL EL QI AH
Sbjct: 119 PNKTLHHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQARVHALSELKQIVIAH 178
Query: 181 ASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVD 240
ARKT+V+EGGV++ISSLLGPFTSHAVGSE V +LV+L LDS+SK+ LMQPAKVSL+VD
Sbjct: 179 LMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGLMQPAKVSLIVD 238
Query: 241 MLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGILPGLSLL 300
MLN+GS ETKINC RLI L+EEK FR E+VSSH LL+GLMRLVK+KRH NG+ P L LL
Sbjct: 239 MLNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKRHRNGVSPALRLL 298
Query: 301 RSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKLALKDCANT 360
+ I + +VRSL+VSIGAVPQLV++LPSLDP+CL+LAL +LDAL + EG++A+KD ANT
Sbjct: 299 KPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKDSANT 358
Query: 361 IPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLK 420
IP TVR+LMRVSE+CT YALSILWS+CK+APEECS AV+ GLAAKL LVIQSGC+ LK
Sbjct: 359 IPYTVRVLMRVSENCTNYALSILWSVCKLAPEECSPLAVEVGLAAKLLLVIQSGCDAALK 418
Query: 421 QRSAELLKLCSLNYTDTTFISKCKLTRTIQ 450
QRSAELLKLCSL+Y+DT FISKCKLTRTIQ
Sbjct: 419 QRSAELLKLCSLHYSDTMFISKCKLTRTIQ 448
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/451 (70%), Positives = 378/451 (83%), Gaps = 8/451 (1%)
Query: 1 MPMFQPSKRDVLVGFEGSGDGQILDLDTAVKDGVLGGTVGAG-VTGAGVGERLDLKKMIA 59
MPMFQPSK G DG ILDL +AVKDGVLGG G V ++LDLK+MI+
Sbjct: 1 MPMFQPSK-------NGGFDGHILDLHSAVKDGVLGGGDGKFLVVVTDEKKKLDLKEMIS 53
Query: 60 ELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSV 119
EL+L EIPSVF+CPISLEPMQDPVTLCTGQTYERSNILKWF++G TCPTTMQELWDD V
Sbjct: 54 ELELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLV 113
Query: 120 TPNKTLYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAAA 179
TPNKTL+ LI+TWFSQKY+LMKKRSEDVQGRA E+LGTL+K KG+A+V AL EL Q+ A
Sbjct: 114 TPNKTLHQLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLRKAKGKAKVHALSELKQVVMA 173
Query: 180 HASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLV 239
HA A+KT+VDEGGV +ISSLL PFTSHAVGSEA+ +LVNL LDS+SK LMQPA+VSL+V
Sbjct: 174 HAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELDSDSKAGLMQPARVSLMV 233
Query: 240 DMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGILPGLSL 299
DMLN+GS+ETKINC RLI +L+EEK FR E+VSSH LL+GLMRLVK++R NG+ P L+L
Sbjct: 234 DMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKDRRRRNGVSPALTL 293
Query: 300 LRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKLALKDCAN 359
L+S+ + +VR+L+V IGAVPQLV++LP LD +CL+ AL +LD+L EG++ALKD N
Sbjct: 294 LKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGRIALKDSVN 353
Query: 360 TIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVL 419
TIP+TVRLLM+VSE CT YA+SILWS+CK+A EECSS AV+ GLAAKL LVIQSGC+P L
Sbjct: 354 TIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVEVGLAAKLLLVIQSGCDPAL 413
Query: 420 KQRSAELLKLCSLNYTDTTFISKCKLTRTIQ 450
KQRSAELLKLCSL+Y+D+ FISKCKLTRTIQ
Sbjct: 414 KQRSAELLKLCSLHYSDSMFISKCKLTRTIQ 444
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 190/390 (48%), Gaps = 37/390 (9%)
Query: 54 LKKMIAELDLA-EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLG-RYTCPTTM 111
+ + I LDL +IP F CPISLE MQDPVT+CTGQTY+R++I W S+G TCP T
Sbjct: 1 MPRNIEPLDLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTR 60
Query: 112 QELWDDSVTPNKTLYHLIHTWFSQKYLLMKKRSEDVQ------------------GRASE 153
L D ++ PN TL LI W + RS V+ +AS
Sbjct: 61 APLSDFTLIPNHTLRRLIQEW------CVANRSNGVERIPTPKQPADPTSVRALLSQASA 114
Query: 154 LLGTLKKVKGQARVQALKELHQIAAAHASARKTMVDEGGVA-LISSLLGPFTSHAVGSEA 212
+ GT V ++R AL+ L A R + LI L TS + SE+
Sbjct: 115 ITGT--HVSVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSES 172
Query: 213 VGVLVNLTLDSESKTNLM--QPAKVSLLVDMLNEGSVETKINCTRLIEKL---MEEKDFR 267
+ +LV L + ++ + P +V L +L + S+ET++N LIE + + D +
Sbjct: 173 LALLVMLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLK 232
Query: 268 PEIVSSHRLLIGLMRLVKNKRHPNGILP-GLSLLRSICLLNEVRSLVVSIGAVPQLVELL 326
I +S + G++ L++N L G+ L ++C + R + ++ GA L++ L
Sbjct: 233 GSISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRL 292
Query: 327 PSLDPDC-LQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWS 385
+ C + AL ++ L PEG A + A T+P V+ ++RVS+ T+YA L +
Sbjct: 293 AADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLA 352
Query: 386 ICKIAPEECSSAAVDAGLAAKLFLVIQSGC 415
+C A E A AG+ +L L++QS C
Sbjct: 353 LCT-AEERWREEAAGAGVVVQLLLMVQSEC 381
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 206/413 (49%), Gaps = 29/413 (7%)
Query: 61 LDLA-EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSV 119
LDL +IP F CPISL+ M DPVT+ TGQTY+R++I W ++G TCP T L D ++
Sbjct: 8 LDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTL 67
Query: 120 TPNKTLYHLIHTWF-------SQKYLLMKKRSEDVQGR-----ASELLGTLKKVKGQARV 167
PN TL LI W ++ K+ ++ + R AS + GT V ++R
Sbjct: 68 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGT--HVSVRSRA 125
Query: 168 QALKELHQIAAAHASARKTMVDEGGVALISSLL-------GPFTSHAVGSEAVGVLVNLT 220
A++ L +A R + ++ +L + S A+ VL+++T
Sbjct: 126 AAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMT 185
Query: 221 LDSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLM---EEKDFRPEIVSSHRLL 277
++E + P++V + +L + S+E ++N LIE ++ + D + I S +
Sbjct: 186 -ETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIF 244
Query: 278 IGLMRLVKNKRHPNGILP-GLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDC-LQ 335
G++ L+KN L G+ + ++CL+ + R L +S GA L++ L + C +
Sbjct: 245 EGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTE 304
Query: 336 LALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECS 395
L ++ L LPEG A + A T+P V+ ++RVS+ T+YA L ++C A E C
Sbjct: 305 RGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCT-AEERCR 363
Query: 396 SAAVDAGLAAKLFLVIQSGCNPVLKQRSAELLKLCSLNYTDTTFISKCKLTRT 448
A AGL +L L++QS C K+++ LLKL ++ D + + R+
Sbjct: 364 DEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDFNRS 416
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 195/399 (48%), Gaps = 27/399 (6%)
Query: 65 EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKW-FSLGRYTCPTTMQELWDDSVTPNK 123
EIP F+CPISLE M+DPV + TG TY+R +I KW F+ + +CP T Q++ D +TPN
Sbjct: 11 EIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNH 70
Query: 124 TLYHLIHTW--FSQKYLLMKKRSEDVQGRASELLGTLKKVKG--QARVQALKELHQIAAA 179
TL LI +W + Y + + + SE+ ++ + +V+ LK L QI +
Sbjct: 71 TLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIVSE 130
Query: 180 HASARKTMVDEGGVALISSLLGPFTSH-AVGSEAVGVLVNL----TLDSESKTNLMQPAK 234
+A+ ++ + G +++++ + + ++ EA+ +L +L T+ N
Sbjct: 131 NATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNNKKDNNI 190
Query: 235 VSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGIL 294
V L ++ G E+++ T L++ ++E D + + +++++ ++
Sbjct: 191 VKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRISQKATK 250
Query: 295 PGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCL------QLALCILDALSSLP 348
+ +L +IC R V G + ++ELL +D ++A+ +LD L
Sbjct: 251 AAMHILVNICPWGRNRHKAVEAGVISVIIELL--MDESFTSERRGPEMAMVVLDLLCQCA 308
Query: 349 EGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAA-----VDAGL 403
EG+ + I + ++RVS+ + A+ +L S+ + C++ A + G+
Sbjct: 309 EGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRF----CATPALLHEMLQLGV 364
Query: 404 AAKLFLVIQSGCNPVLKQRSAELLKLCSLNYTDTTFISK 442
AKL LV+Q C K+++ ELLKL + + D+ + K
Sbjct: 365 VAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPK 403
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 36/385 (9%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CPISLE MQDPV + +GQTYERS I KW G TCP T Q L S+TPN L
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 126 YHLIHTWFSQKYLLMKKRSEDVQGRAS------------ELLGTLKKVKGQARVQALKEL 173
LI W + + K ++ + + + L+ L+ + A E+
Sbjct: 288 KSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEI 347
Query: 174 HQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPA 233
+A + + R + + G + L+ +LL + AV L+NL++ +K +++
Sbjct: 348 RLLAKRNVNNRICIAEAGAIPLLVNLLS-SSDPRTQEHAVTALLNLSIHENNKASIVDSH 406
Query: 234 KVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIG-------LMRLVKN 286
+ +V++L GS+ET+ N + F +V +++ IG L+ L+ +
Sbjct: 407 AIPKIVEVLKTGSMETRENAAATL--------FSLSVVDENKVTIGAAGAIPPLINLLCD 458
Query: 287 KRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPD--CLQLALCILDAL 344
P G + + ++C+ + V G V L+ L +DP + AL +L L
Sbjct: 459 GS-PRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFL--VDPTGGMIDEALSLLSIL 515
Query: 345 SSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLA 404
+ PEGK+ + + IP V ++ S + A +ILW +C A E + AA AG+
Sbjct: 516 AGNPEGKIVIAR-SEPIPPLVEVIKTGSPRNRENAAAILWLLCS-ADTEQTLAAKAAGVE 573
Query: 405 AKLFLVIQSGCNPVLKQRSAELLKL 429
L + ++G + K++++ +L+L
Sbjct: 574 DALKELSETGTDRA-KRKASSILEL 597
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 191/388 (49%), Gaps = 21/388 (5%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
+PS F CPISL+ M+ PV+LCTG TY+R++I +W G TCP TMQ L PN TL
Sbjct: 12 VPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTL 71
Query: 126 YHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKG-QARVQALKELHQIA--AAHAS 182
LI+ W S + + + T ++V R+ +L+ L +I +
Sbjct: 72 QRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLENLMKIVRFVKDSD 131
Query: 183 ARKTMVDEGGVALISSLLGPFTSHAVGSE----AVGVLVNLTLDSESKTNLMQPAK---- 234
+ + + + + + L+ + E A+ +L ++ +D E +NLM
Sbjct: 132 SNREFLSK-KMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVDRERLSNLMLANDGGDC 190
Query: 235 VSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVK--NKRHPNG 292
++ ++ + G++E+KI R+++ + + + I +L +M+ + P+
Sbjct: 191 LTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSISITESSDPSL 250
Query: 293 ILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPS---LDPDCLQLALCILDALSSLPE 349
I LS L +I VRS +++ A+ ++ ++L + + + +L +L+ LSS E
Sbjct: 251 IEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKSLKLLETLSSKRE 310
Query: 350 GKLAL--KDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEE--CSSAAVDAGLAA 405
G+L + D + V+ L++VS T++A++ILW +C + E+ +
Sbjct: 311 GRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDKTVEETVERSNGVT 370
Query: 406 KLFLVIQSGCNPVLKQRSAELLKLCSLN 433
KL +VIQS C+ +++Q + +L+K+ N
Sbjct: 371 KLLVVIQSNCSAMVRQMAKDLIKVLKFN 398
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 177/383 (46%), Gaps = 30/383 (7%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CPISLE M+DPV + TGQTYERS+I KW G TCP + + L +TPN L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 126 YHLIHTWFSQKYLLMKK-----RSEDVQGRAS---------ELLGTLKKVKGQARVQALK 171
LI W + + + R+ + G +S LL L + + A
Sbjct: 308 KSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAG 367
Query: 172 ELHQIAAAHASARKTMVDEGGVALISSLLG---PFTSHAVGSEAVGVLVNLTLDSESKTN 228
EL +A + R + + G + L+ LL P T +V L+NL+++ +K
Sbjct: 368 ELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQE----HSVTALLNLSINEGNKGA 423
Query: 229 LMQPAKVSLLVDMLNEGSVETKINCTRLIEKL--MEEKDFRPEIVSSHRLLIGLMRLVKN 286
++ ++ +V++L GS+E + N + L ++E + + LI L+
Sbjct: 424 IVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTR 483
Query: 287 KRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSS 346
+ G + + ++C+ +S V G V L LL + AL IL LS+
Sbjct: 484 R----GKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILST 539
Query: 347 LPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAK 406
EGK A+ + A +IP V ++ S + A +ILW +C I E + A + G
Sbjct: 540 NQEGKTAIAE-AESIPVLVEIIRTGSPRNRENAAAILWYLC-IGNIERLNVAREVGADVA 597
Query: 407 LFLVIQSGCNPVLKQRSAELLKL 429
L + ++G + K+++A LL+L
Sbjct: 598 LKELTENGTDRA-KRKAASLLEL 619
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 199/404 (49%), Gaps = 47/404 (11%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
+P+ F CPISL+ M+ PV+LCTG TY+R++I +W G TCP TMQ L + PN+TL
Sbjct: 10 VPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTL 69
Query: 126 YHLIHTWF-SQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAAAHASAR 184
LI W S + + +E E+ + +VK + + +E+ ++ R
Sbjct: 70 QRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERDDREV--LSKIVRFGR 127
Query: 185 KTMVDEGGVA-----------LISSLLGPFTSHA---VGSEAVGVLVNL---TLDSESKT 227
++ + G +A LI+ + TS A V EAV +L + D +
Sbjct: 128 ESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSKVSDRRRFS 187
Query: 228 NLMQPA---KVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLV 284
NL+ ++S++V + G+VE KI+C L+E + + + + I L+ LM+ +
Sbjct: 188 NLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDGLITELMKSI 247
Query: 285 KNKRHPNGILPGLSLLRSI-----CLLNEVRSLVVSIGAVPQ-----LVELLPSLDPDCL 334
+ I LS L +I LN +R + IG V + L S+ CL
Sbjct: 248 SKDSDLSLIESSLSCLIAISSPKRVKLNLLREKL--IGDVTKLLSDSTSSLSVSVTEKCL 305
Query: 335 QLALCILDALSSLPEGKLAL----KDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIA 390
+L L+ L+S EG+ + +C T+ V+ LM+VS T++A+++LWS+ +
Sbjct: 306 KL----LEILASTKEGRSEICGGDGECLKTV---VKKLMKVSTAATEHAVTVLWSVSYLF 358
Query: 391 PEECSSAAVDA-GLAAKLFLVIQSGCNPVLKQRSAELLKLCSLN 433
E+ + AV + K+ L++QS C+P +++ +LLK+ +N
Sbjct: 359 KEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKVN 402
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 172/385 (44%), Gaps = 31/385 (8%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CPISLE M+DPV + +GQTYER+ I KW G TCP T Q L ++TPN L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 126 YHLIHTWFSQKYLLMKKRSEDVQGRA-------------SELLGTLKKVKGQARVQALKE 172
LI W + K ++ R +L+ L + + A E
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGE 375
Query: 173 LHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQP 232
+ +A +A R + + G + L+ LL S + +V L+NL++ +K ++
Sbjct: 376 IRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSR-IQEHSVTALLNLSICENNKGAIVSA 434
Query: 233 AKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVK------N 286
+ +V +L +GS+E + N + F ++ +++ IG + + N
Sbjct: 435 GAIPGIVQVLKKGSMEARENAAATL--------FSLSVIDENKVTIGALGAIPPLVVLLN 486
Query: 287 KRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSS 346
+ G + L ++C+ + + G +P L LL + AL IL LSS
Sbjct: 487 EGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSS 546
Query: 347 LPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAK 406
PEGK A+ ++ +P+ V + S + A ++L +C P+ A GL
Sbjct: 547 HPEGK-AIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQ-KLGLMGP 604
Query: 407 LFLVIQSGCNPVLKQRSAELLKLCS 431
L + +G + K+++A+LL+ S
Sbjct: 605 LIDLAGNGTDRG-KRKAAQLLERIS 628
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 167/345 (48%), Gaps = 30/345 (8%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F+CP+SLE M+DPV + TGQTYER+ I +W G TCP T Q+L + ++TPN L
Sbjct: 241 IPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVL 300
Query: 126 YHLIHTWFSQK-------YLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAA 178
LI W ++ Y+ + ++ L+ L + R A+ E+ ++
Sbjct: 301 RSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSK 360
Query: 179 AHASARKTMVDEGGVALISSLLGPFTSHAVGSE--AVGVLVNLTLDSESKTNLMQPAKVS 236
R + + G + ++ +LL TS V ++ A+ ++NL++ +K +M V+
Sbjct: 361 RSTDNRILIAEAGAIPVLVNLL---TSEDVATQENAITCVLNLSIYENNKELIMFAGAVT 417
Query: 237 LLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIG-------LMRLVKNKRH 289
+V +L G++E + N + F + ++++IG L+ L++N
Sbjct: 418 SIVQVLRAGTMEARENAAATL--------FSLSLADENKIIIGGSGAIPALVDLLENG-T 468
Query: 290 PNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLP-SLDPDCLQLALCILDALSSLP 348
P G + L ++C+ + + V G V LV++L S + AL IL L++
Sbjct: 469 PRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQ 528
Query: 349 EGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEE 393
+ K A+ ANT+P + +L + A +IL S+CK E+
Sbjct: 529 DAKSAIVK-ANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEK 572
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 156/339 (46%), Gaps = 27/339 (7%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CPISLE M+DPV + TGQTYER+ I KW + G +TCPTT Q++ ++TPN L
Sbjct: 273 IPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVL 332
Query: 126 YHLIHTWFSQKYLLMKKR-----------SEDVQGRASELLGTLKKVKGQARVQALKELH 174
LI W + KR S + LL L + + A EL
Sbjct: 333 RSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELR 392
Query: 175 QIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAK 234
+A +A+ R + + G + L+ SLL AV L+NL++ ++K +++
Sbjct: 393 LLAKRNANNRICIAEAGAIPLLLSLLSSSDLR-TQEHAVTALLNLSIHEDNKASIISSGA 451
Query: 235 VSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVK------NKR 288
V +V +L GS+E + N + F ++ +++ IG M + +
Sbjct: 452 VPSIVHVLKNGSMEARENAAATL--------FSLSVIDEYKVTIGGMGAIPALVVLLGEG 503
Query: 289 HPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLP 348
G + L ++C+ + + G VP ++ L+ + + A+ IL LSS P
Sbjct: 504 SQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHP 563
Query: 349 EGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSIC 387
EGK A+ A +P V ++ + + A +++ +C
Sbjct: 564 EGKAAI-GAAEPVPVLVEMIGSGTPRNRENAAAVMLHLC 601
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 156/339 (46%), Gaps = 27/339 (7%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CPISLE M+DPV + TGQTYER+ I KW + G +TCPTT Q++ ++TPN L
Sbjct: 273 IPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVL 332
Query: 126 YHLIHTWFSQKYLLMKKR-----------SEDVQGRASELLGTLKKVKGQARVQALKELH 174
LI W + KR S + LL L + + A EL
Sbjct: 333 RSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELR 392
Query: 175 QIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAK 234
+A +A+ R + + G + L+ SLL AV L+NL++ ++K +++
Sbjct: 393 LLAKRNANNRICIAEAGAIPLLLSLLSSSDLR-TQEHAVTALLNLSIHEDNKASIISSGA 451
Query: 235 VSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVK------NKR 288
V +V +L GS+E + N + F ++ +++ IG M + +
Sbjct: 452 VPSIVHVLKNGSMEARENAAATL--------FSLSVIDEYKVTIGGMGAIPALVVLLGEG 503
Query: 289 HPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLP 348
G + L ++C+ + + G VP ++ L+ + + A+ IL LSS P
Sbjct: 504 SQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHP 563
Query: 349 EGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSIC 387
EGK A+ A +P V ++ + + A +++ +C
Sbjct: 564 EGKAAI-GAAEPVPVLVEMIGSGTPRNRENAAAVMLHLC 601
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 194/400 (48%), Gaps = 39/400 (9%)
Query: 60 ELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSV 119
+L + +P F CPISL+ M+ PV+L TG TY+R +I +W G TCP TMQ L +
Sbjct: 5 DLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEF 64
Query: 120 TPNKTLYHLIHTWFSQKYLLMKKRSE------DVQGRASELLGTLKK--VKGQARVQALK 171
PN TL+ LI W + +R++ D R E+ +++ ++ AR + L+
Sbjct: 65 VPNLTLHRLIDHWSDS----INRRADSESPESDTPTR-DEINAAIERFRIENDARSKILR 119
Query: 172 ELHQIAAAHASARKTMV-DEGGVALISSLLGPFTSHA------VGSEAVGVLVNL---TL 221
A R+ + + VA++ L+ + + VG EAV +L +
Sbjct: 120 ----FARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVG-EAVKILSMIRRKIF 174
Query: 222 DSESKTNLMQPAKVSLLVD---MLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLI 278
D +NL+ L ++ G+ + KI+C+ ++E + + + + I L+
Sbjct: 175 DRRRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVT 234
Query: 279 GLMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELL--PSLDPDCLQL 336
+++L+ + + I LSLL +I V+ ++ V +L LL P+ +
Sbjct: 235 EIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTEK 294
Query: 337 ALCILDALSSLPEGKLALKD--CANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPE-E 393
L +L+A+SS EG+ + D C T+ N LM+VS T++A+++LWS+C + E +
Sbjct: 295 CLKLLEAISSCKEGRSEICDGVCVETVVNK---LMKVSTAATEHAVTVLWSVCYLFKEKK 351
Query: 394 CSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELLKLCSLN 433
A + K+ L++QS C+ ++ +LLK+ +N
Sbjct: 352 AQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVN 391
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 161/350 (46%), Gaps = 31/350 (8%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F+CPISLE M+DP + TGQTYERS I +W G +CP T Q+L + ++TPN L
Sbjct: 243 IPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVL 302
Query: 126 YHLIHTWFSQKYL-----LMKKRSEDVQGRASELLGTLKKVKG----------QARVQAL 170
LI W ++ + M R+++ G +L G + ++ + R A+
Sbjct: 303 RSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAV 362
Query: 171 KELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLM 230
E+ ++ R + + G + ++ LL AV ++NL++ +K +M
Sbjct: 363 SEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIM 422
Query: 231 QPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIG----LMRLVKN 286
V+ +V +L GS+E + N + F + ++++IG +M LV
Sbjct: 423 LAGAVTSIVLVLRAGSMEARENAAATL--------FSLSLADENKIIIGASGAIMALVDL 474
Query: 287 KRHPN--GILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCL-QLALCILDA 343
++ + G + L ++C+ + V G V LV++L + + AL IL
Sbjct: 475 LQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSV 534
Query: 344 LSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEE 393
L+S K A+ AN IP + L + + A +IL +CK E+
Sbjct: 535 LASNQVAKTAILR-ANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEK 583
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 150/345 (43%), Gaps = 34/345 (9%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLY 126
P F CPISLE M DPV + +GQTYER I KW G TCP T + L D +TPN L
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLR 316
Query: 127 HLIHTWFSQKYLLMKKR----------------SEDVQGRASELLGTLKKVKGQARVQAL 170
LI W + KR +D + ELL L + + R A
Sbjct: 317 SLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRSAA 376
Query: 171 KELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLM 230
E+ +A + R + G + L+ +LL AV ++NL++ E+K ++
Sbjct: 377 GEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIV 436
Query: 231 QPA-KVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIG-------LMR 282
+ V +V +L +GS+E + N + F ++ +++ IG L+
Sbjct: 437 YSSGAVPGIVHVLQKGSMEARENAAATL--------FSLSVIDENKVTIGAAGAIPPLVT 488
Query: 283 LVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILD 342
L+ G + L ++C+ + V G VP L+ LL + + +L IL
Sbjct: 489 LLSEGSQ-RGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILA 547
Query: 343 ALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSIC 387
LSS P+GK + A+ +P V + S + + ++L +C
Sbjct: 548 ILSSHPDGKSEV-GAADAVPVLVDFIRSGSPRNKENSAAVLVHLC 591
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 188/409 (45%), Gaps = 44/409 (10%)
Query: 65 EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKW-FSLGRYTCPTTMQELWDDSVTPNK 123
EIPS F+CPISL+ M+DPV + TG TY+R +I KW FS + +CP T Q + + +TPN
Sbjct: 6 EIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNH 65
Query: 124 TLYHLIHTW--FSQKYLLMKKRSEDVQGRASELLGTLKKVKGQA--RVQALKELHQIAAA 179
TL LI +W + Y + + + SE+ +K+ +V+ LK L QI +
Sbjct: 66 TLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVSE 125
Query: 180 HASARKTM----VDEGGVALISSLLGPF--------------------------TSHAVG 209
+ + ++ + V E ++S+ + + +S ++
Sbjct: 126 NTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSSRSLM 185
Query: 210 SEAVGVLVNLTLDSESKTNLMQPAK----VSLLVDMLNEGSVETKINCTRLIEKLMEEKD 265
EA+ VL +L + +L+ K V L ++ G E++ L++KL+E D
Sbjct: 186 DEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLLEVAD 245
Query: 266 FRPEIVSSHRLLIGLMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVEL 325
I+ L +++++ ++ + +L C R V G + ++EL
Sbjct: 246 PMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGTISMIIEL 305
Query: 326 LP----SLDPDCLQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALS 381
L S + ++A+ +LD L EG+ + I + ++RVS+ ++ A+
Sbjct: 306 LMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVR 365
Query: 382 ILWSICKI-APEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELLKL 429
+L S+ + A + G+ AKL LV+Q C K+++ ELLKL
Sbjct: 366 VLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKL 414
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 168/382 (43%), Gaps = 29/382 (7%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IPS F CPIS E M+DPV + +G TY+R NI KWF G TCP T L PN T+
Sbjct: 33 IPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTI 92
Query: 126 YHLIHTWFSQKYLLMKKR---------SEDVQGRASELLGTLKKVKGQARVQALKELHQI 176
+I W +R S V L ++ A ++ + ++ ++
Sbjct: 93 RRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVTKMTRL 152
Query: 177 AAAHASARKTMVDEGGVALISSLLGPFTSHAVGS----EAVGVLV-NLTLDSESKTNLMQ 231
RK + + G ++ F+ +A S E V VL L + E ++ L
Sbjct: 153 GKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLPIGLEGQSKLTT 212
Query: 232 PAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRL--LIGLMR-LVKNKR 288
+ + LV++L G N LI++L+E + H L + G+ +K+
Sbjct: 213 TSSFNRLVELLRNGDQ----NAAFLIKELLE-----LNVTHVHALTKINGVQEAFMKSIN 263
Query: 289 HPNGILPGLSLLRSICLLN-EVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSL 347
+ + L + + L N E S + + V VE+L + + AL +L+ +
Sbjct: 264 RDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENSVCEKALTVLNVICET 323
Query: 348 PEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKL 407
EG+ ++ IP V+ ++++SE + +S++W +CK A+ G KL
Sbjct: 324 KEGREKVRRNKLVIPILVKKILKISEK--KDLVSVMWKVCKSGDGSEVEEALRLGAFKKL 381
Query: 408 FLVIQSGCNPVLKQRSAELLKL 429
+++Q GC K++ ELLK+
Sbjct: 382 VVMLQVGCGEGTKEKVTELLKM 403
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 24/242 (9%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
+P F+CPI+LE M DPV + TGQTYE+ +I KWF G TCP T QEL S+ PN L
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFAL 349
Query: 126 YHLIHTWFSQKYLLM--KKRSEDVQGRASE----LLGTLKKVKGQARVQALKELHQIAAA 179
+LI W + + K+ S D Q + L+ L + + + +++K++ +A
Sbjct: 350 KNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARE 409
Query: 180 HASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLV 239
+ R + + G + L+ LL + + AV L+NL++D +K + + ++
Sbjct: 410 NPENRVLIANAGAIPLLVQLLS-YPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNII 468
Query: 240 DMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGILPGLSL 299
++L G+ E + N + F ++ +++ IGL NGI P + L
Sbjct: 469 EILENGNREARENSAAAL--------FSLSMLDENKVTIGL---------SNGIPPLVDL 511
Query: 300 LR 301
L+
Sbjct: 512 LQ 513
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 131/285 (45%), Gaps = 30/285 (10%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
+P FVCPISL+ M DPV + TGQTY+R++I +W G TCP T Q L D + PN+ L
Sbjct: 305 VPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRAL 364
Query: 126 YHLIHTW-------FSQKY-----------LLMKKRSEDVQGRASELLGTLKKVKGQARV 167
+LI W + ++ L K E + S L+ L A+
Sbjct: 365 KNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAAQT 424
Query: 168 QALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSE-AVGVLVNLTLDSESK 226
A +E+ +A R + + G + + LL + +A+ E +V ++NL++ ++K
Sbjct: 425 VAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLT--SENAIAQENSVTAMLNLSIYEKNK 482
Query: 227 TNLMQPAK-----VSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLM 281
+ +M+ VS+LV L +VE + N + L +++ I + + L
Sbjct: 483 SRIMEEGDCLESIVSVLVSGL---TVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALA 539
Query: 282 RLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELL 326
L++N P G ++ L ++ + S ++ G V LV L
Sbjct: 540 LLLQNG-TPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGAL 583
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 31/282 (10%)
Query: 61 LDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVT 120
L+ P F CP+S E M+DPV L +GQTY++ I KW S G TCP T Q L ++T
Sbjct: 69 LETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALT 128
Query: 121 PNKTLYHLIHTWFSQKYLLMKKR--------SEDVQGRASELLGTLK-KVKG---QARVQ 168
PN + +I W + L K + E V E+ +L KV Q +
Sbjct: 129 PNLLIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKS 188
Query: 169 ALKELHQIAAAHASARKTMVDEGG--VALISSLL-GPFTSHAVGSEAVGVLVNLTLDSES 225
A KEL + R + L++ LL G + + V L+N+++ +S
Sbjct: 189 AAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDS 248
Query: 226 KTNLM--QPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRL 283
L+ P + LL+D L G+V T+ N I F + S+++LIG +
Sbjct: 249 NKKLVCENPNVIPLLIDALRRGTVATRSNAAAAI--------FTLSALDSNKVLIGKSGI 300
Query: 284 VK------NKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAV 319
+K + +P I + + ++C+ +E RS V GAV
Sbjct: 301 LKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAV 342
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 26/230 (11%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
+P F CPISL+ M+DPV TGQTY+R +I++W G TCP + Q L D + PN+ L
Sbjct: 297 VPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRAL 356
Query: 126 YHLIHTWFSQKYLLMKKRSEDVQGRASELLGT------LKKVKGQARV------------ 167
LI W Y L E +G A + + ++ K AR+
Sbjct: 357 RSLISQWCG-VYGLQYDSPESNEGMAECVAASCSSRAAMEANKATARILVRMLEDGSENV 415
Query: 168 --QALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSE-AVGVLVNLTLDSE 224
A KE+ +A R + D G + L+ LL ++ + E AV L+NL++
Sbjct: 416 KAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLL--LSNDWMAQENAVTALLNLSIFEP 473
Query: 225 SKTNLM-QPAKVSLLVDMLNEG-SVETKINCTRLIEKLMEEKDFRPEIVS 272
+K +M Q + L+V +L G + E K N + L +F+ I++
Sbjct: 474 NKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMN 523
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 152/306 (49%), Gaps = 27/306 (8%)
Query: 72 CPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLYHLIHT 131
CPISLE M DPV L +G TY+RS+I KWF+ G TCP T + L + N ++ +I +
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQS 343
Query: 132 WFSQKYLLM----KKRSEDVQGRASE---------LLGTLKKVKGQARVQALKELHQIAA 178
+ Q ++M KK+ + + A+E L G L K + V+AL E+ +
Sbjct: 344 YSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRILTK 403
Query: 179 AHASARKTMVDEGGVALISSLLGPFTSH--AVGSEAVGVLVNLTLDSESKTNLM--QPAK 234
R +V+ G ++ SL+ S + A+ ++NL+ D KT ++
Sbjct: 404 TSTFYRSCLVEAG---VVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGG 460
Query: 235 VSLLVDMLNEGS-VETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGI 293
+ L+V++LN+G+ E++ + L D+ I + GL+R+VK+ + +
Sbjct: 461 LRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSA 520
Query: 294 -LPGLSLLRSICLLNEVRS--LVVSIGAVPQLVELLPS--LDPDCLQLALCILDALSSLP 348
L +RS+ L+N+ + +++ G VP L++L+ S + ++ IL ++ P
Sbjct: 521 KRNALIAIRSL-LMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAKMAEYP 579
Query: 349 EGKLAL 354
+G +++
Sbjct: 580 DGMISV 585
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 171/401 (42%), Gaps = 33/401 (8%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CPIS++ M+DPV + TG TY+R +I W + G TCP T L PN T+
Sbjct: 31 IPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTI 90
Query: 126 YHLIHTWFSQK--YLLMKKRSEDVQGRASELLGTLKKVKGQAR----------VQALKEL 173
+I W +K L+ + + V E+ +K+ R ++ +K+L
Sbjct: 91 RKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIKKL 150
Query: 174 HQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVN---------LTLDSE 224
+ + V+E V + L F + G E + ++N + E
Sbjct: 151 ----GDESEKNRKCVNENSVGWV--LCDCFDKFS-GDEKLTFMLNEILSLLTWMFPIGLE 203
Query: 225 SKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFR-PEIVSSHRLLIGLMRL 283
+ L + +L + N ++++++ + R + + L++L
Sbjct: 204 GISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEALVKL 263
Query: 284 VKNKRHPNGILPGLSLLRSICLLN-EVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILD 342
+++ + L + + L E+ S + IG V VE++ + + AL +LD
Sbjct: 264 IRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKALAVLD 323
Query: 343 ALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAG 402
A+ G+ ++ A +P V+ + +VSE T+ ++S++ + K AV G
Sbjct: 324 AICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTVAVEDAVRLG 383
Query: 403 LAAKLFLVIQSGCNPVLKQRSAELLKLCSLNYTDTTFISKC 443
K+ LV+Q G K+++ ELLK+ + T +S C
Sbjct: 384 AFQKVLLVLQVGYGEETKEKATELLKMMN---TQMKLMSDC 421
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 19/238 (7%)
Query: 64 AEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNK 123
A IP+ F CPI+LE M+DPV + TGQTY+R +I W G TCP T Q L S+ PN+
Sbjct: 272 ANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNR 331
Query: 124 TLYHLIHTWFSQKYLLM-------------KKRSEDVQGRASELLGTLKKVKGQARVQAL 170
L +LI W + + K+ E + S L+ L V
Sbjct: 332 ALKNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNGVV--- 388
Query: 171 KELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLM 230
EL +A + AR + + G + + L ++ AV ++NL++ ++KT +M
Sbjct: 389 FELRALAKSDTVARACIAEAGAIPKLVRYLAT-ECPSLQINAVTTILNLSILEQNKTRIM 447
Query: 231 QP-AKVSLLVDMLNEGSV-ETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKN 286
+ ++ ++++L G+ E K N + L +R + R++ GL+ L K
Sbjct: 448 ETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQ 505
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 31/310 (10%)
Query: 70 FVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLYHLI 129
+CPISLE M DPV + TG TY+RS+I KWF G TCP T + L + N ++ +I
Sbjct: 292 LLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVI 351
Query: 130 HTWFSQKYLLM------KKRSEDV--QGRASELLGTL-------KKVKGQARV--QALKE 172
+++ +K +DV + A++ G L + + G + +A++E
Sbjct: 352 RKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVRE 411
Query: 173 LHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQP 232
+ + R +V G V + LL + G+L NL+ K+ +
Sbjct: 412 IRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGIL-NLSKHVTGKSKIAGE 470
Query: 233 AKVSLLVDMLNEGS-VETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPN 291
+ +LV++LNEG+ ET++ + L +D+ I + + GLM +VK + +
Sbjct: 471 G-LKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGD 529
Query: 292 GI-LPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPS------LDPDCLQLALCILDAL 344
L + + + ++ V++ GAVP L++LL S L DC L L L
Sbjct: 530 SAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADC----LATLAKL 585
Query: 345 SSLPEGKLAL 354
+ P+G + +
Sbjct: 586 AEYPDGTIGV 595
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 43/69 (62%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLY 126
P CPISL+ M DPV + +GQTYER I KWFS G TCP T Q+L S+TPN +
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 127 HLIHTWFSQ 135
LI +W Q
Sbjct: 333 GLIASWCEQ 341
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 57 MIAELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQEL-W 115
M E + EIP+ F+CPISLE M+DPVT +G TY+R NI+KW +CP T Q L
Sbjct: 1 MDQEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLE-KVPSCPVTKQPLPL 59
Query: 116 DDSVTPNKTLYHLIHTW 132
D +TPN L LI W
Sbjct: 60 DSDLTPNHMLRRLIQHW 76
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 310 RSLVVSIGAVPQLVELLPSL--DPDCLQLALCILDALSSLPEGKLALKDCANTIPNTVRL 367
RSL+V +GAV +L+EL S + +L L +L L G+ + I +
Sbjct: 305 RSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGGIAVVTKR 364
Query: 368 LMRVSEDCTQYALSILWSICKIAPEE-CSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAEL 426
L+RVS A+SIL ++ K +PE V+ G KL V+ C LK+++ E+
Sbjct: 365 LLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLNLKEKAKEI 424
Query: 427 LK 428
LK
Sbjct: 425 LK 426
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 43/69 (62%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLY 126
P CPISL+ M DPV + +GQTYER I KWFS G +CP T Q+L S+TPN +
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 127 HLIHTWFSQ 135
LI +W Q
Sbjct: 336 GLIASWCEQ 344
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 42/70 (60%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLY 126
P CPISL+ M DPV + +GQTYER I KWFS G TCP T Q+L +TPN +
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 127 HLIHTWFSQK 136
LI +W Q
Sbjct: 340 ALISSWCEQN 349
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 162/351 (46%), Gaps = 35/351 (9%)
Query: 65 EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDS-VTPNK 123
++P+ F CPISLE M DPV L +G T++R +I +W G TCP T L + + PN
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNH 63
Query: 124 TLYHLIHTWFSQKYLLMKKRS------EDVQGRASELLGTL--KKVKGQARVQALKELHQ 175
L LI + ++ +K+ S E ++ L+ TL + +++++L L +
Sbjct: 64 ALRSLILNF---AHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVR 120
Query: 176 IAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKV 235
+ +S R+ + + G V + + + +++ +L+NL+L+ ++K L+ +
Sbjct: 121 LTKRDSSIRRKVTESGAVRAALDCVDS-CNQVLQEKSLSLLLNLSLEDDNKVGLVADGVI 179
Query: 236 SLLVDMLNEGSVETKINCTRLIEKLMEEKDFR------PEIVSSHRLLIGLMRLVKNKRH 289
+V +L GS + K L+ L + + P+ +S+ L+ L+R+ ++
Sbjct: 180 RRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISA---LVSLLRVGNDRER 236
Query: 290 PNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPE 349
+ L ++C + R VV G+VP LVE S L+ A+ +L L
Sbjct: 237 KESA----TALYALCSFPDNRKRVVDCGSVPILVEAADS----GLERAVEVLGLLVKCRG 288
Query: 350 GKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVD 400
G+ + + + V +L + QY+L IL +C CS VD
Sbjct: 289 GREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCC-----CSGEIVD 334
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 70 FVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLYHLI 129
F CP+SLE M DPV + +GQTYE++ I +W LG CP T Q L ++ PN T+ LI
Sbjct: 234 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALI 293
Query: 130 HTW 132
W
Sbjct: 294 ANW 296
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 146 DVQGRASELLGTLKKVKGQARVQALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTS 205
+V+ + +L+ LK + QA EL +A + R + + G + L+ LL T
Sbjct: 538 EVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYS-TD 596
Query: 206 HAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKD 265
A AV L+NL+++ +K + + L+ +L GS E K N +
Sbjct: 597 SATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATL-------- 648
Query: 266 FRPEIVSSHRLLIG-------LMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGA 318
F ++ +++ IG L+ L+ N P G + L ++ + E ++++V GA
Sbjct: 649 FSLSVIEENKIKIGQSGAIGPLVDLLGNGT-PRGKKDAATALFNLSIHQENKAMIVQSGA 707
Query: 319 VPQLVELLPSLDPDC--LQLALCILDALSSLPEGKLAL 354
V L++L +DP + A+ +L L+++PEG+ A+
Sbjct: 708 VRYLIDL---MDPAAGMVDKAVAVLANLATIPEGRNAI 742
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
PE=1 SV=1
Length = 801
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 161/379 (42%), Gaps = 25/379 (6%)
Query: 60 ELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRY-----TCPTTMQEL 114
E + I F+CP++ E M DPVTL G+T+ER I KWF R +CP T QEL
Sbjct: 17 ERGVDHIYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQEL 76
Query: 115 WDDSVTPNKTLYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELH 174
V+ + L + I W S+ D+ R S LG + +QAL +
Sbjct: 77 TSTDVSASIALRNTIEEWRSRN----DAAKLDI-ARQSLFLGNAE----TDILQALMHVR 127
Query: 175 QIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVL-VNLTLDSESKTNLMQPA 233
QI S R + + + +I +L TSH V +A+ L V + D ESK + +
Sbjct: 128 QICRTIRSNRHGVRNSQLIHMIIDMLKS-TSHRVRYKALQTLQVVVEGDDESKAIVAEGD 186
Query: 234 KVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGI 293
V LV L+ + + L+ +L + + +I S H LI L+ L + I
Sbjct: 187 TVRTLVKFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSI 246
Query: 294 LPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDALSSLPEGKLA 353
+ R++ + +V + + +L LL L + L + L LP
Sbjct: 247 VEKAD--RTLENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDV 304
Query: 354 LKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKIAPEECS-----SAAVDAGLAAKLF 408
A T+ +++ LMR S D Q + L ++ KI+ E S S + L LF
Sbjct: 305 KVLVAQTVGSSLVDLMR-SGDMPQRE-AALKALNKISSFEGSAKVLISKGILPPLIKDLF 362
Query: 409 LVIQSGCNPVLKQRSAELL 427
V + LK+ SA +L
Sbjct: 363 YVGPNNLPIRLKEVSATIL 381
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
IP F CP+S E M DPV + +GQT++R++I KW G CP T Q L + PN T+
Sbjct: 238 IPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTV 297
Query: 126 YHLIHTWF 133
+I +W
Sbjct: 298 KAMIASWL 305
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 127/278 (45%), Gaps = 12/278 (4%)
Query: 153 ELLGTLKKVKGQARVQALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSE- 211
+L+ LK + + A E+ + R + G + + SLL ++ + E
Sbjct: 476 KLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLL--YSEEKLTQEH 533
Query: 212 AVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIV 271
AV L+NL++ +K +++ + LV +LN G+ K N + L + R I
Sbjct: 534 AVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIG 593
Query: 272 SSHRLLIGLMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAVPQLVELLPSLDP 331
S+ + L+ L+ K G S L ++ + ++ ++ +V AV LVEL LDP
Sbjct: 594 QSNAAIQALVNLL-GKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVEL---LDP 649
Query: 332 D--CLQLALCILDALSSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSILWSICKI 389
D + A+ +L LS++ EG+ A+ IP V + S+ + A S+L +C
Sbjct: 650 DLEMVDKAVALLANLSAVGEGRQAIVR-EGGIPLLVETVDLGSQRGKENAASVLLQLCLN 708
Query: 390 APEECSSAAVDAGLAAKLFLVIQSGCNPVLKQRSAELL 427
+P+ C + + G L + QSG K+++ +LL
Sbjct: 709 SPKFC-TLVLQEGAIPPLVALSQSGTQRA-KEKAQQLL 744
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 156/386 (40%), Gaps = 102/386 (26%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTP--NKT 124
P FVCPI+ + DPVTL TGQTYER I +W G TCP T Q L S+ P N
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPL-SASILPKTNYV 570
Query: 125 LYHLIHTWFSQKYLLMKKRSEDVQGRASE---------LLGTLKKV--------KGQARV 167
L LI +W Q L ++ S R S +L T ++ K AR
Sbjct: 571 LKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHKNKDYARQ 630
Query: 168 QALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAV-----GVLVNLTLD 222
++ + + AA ++ +++ + V I + L P+ S SE + VL L
Sbjct: 631 RSNRFM---PAAITTSPTSVLSQAAVETIVNSLKPYISSLCTSENLPECEEAVLKIARLL 687
Query: 223 SESKTN------LMQPAKVSLLVDMLNE----------------------------GSVE 248
+SKTN L +P ++ LV++L+ SV+
Sbjct: 688 KDSKTNPQIHSYLSKPTIINGLVEILSASRNREVLRTSIYILSELIFTDDSVAETLNSVD 747
Query: 249 TKINC--TRLIEKLMEEK----DFRPEI--VSSHRLLIGLMRLVKNKRHPNGILPGLSLL 300
+ +C T L L E RP +S+H L+ L+ +++NK N L L+
Sbjct: 748 SDFDCLATLLKNGLAEAALLIYQLRPVFAQLSAHELIPSLVDVIQNK---NEELDDFQLV 804
Query: 301 -----RSICLLNEV--------RSL----VVSIGAVPQLVELLPSLD--PDCLQLALCIL 341
+I +L + RSL V+S +P LV+ L ++ + + LC +
Sbjct: 805 IDPKDAAIAILEQTLMGGDEYSRSLNASSVISANGIPTLVKYLERMEGRRSVVSVLLCCM 864
Query: 342 DALSSLPEGKLALKDCANTIPNTVRL 367
A K C N I N + L
Sbjct: 865 Q----------AEKSCKNLIANRIEL 880
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 156/386 (40%), Gaps = 102/386 (26%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTP--NKT 124
P FVCPI+ + DPVTL TGQTYER I +W G TCP T Q L S+ P N
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPL-SASILPKTNYV 570
Query: 125 LYHLIHTWFSQKYLLMKKRSEDVQGRASE---------LLGTLK--------KVKGQARV 167
L LI +W Q L ++ S R S +L T + K K AR
Sbjct: 571 LKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHKNKDYARQ 630
Query: 168 QALKELHQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEAV-----GVLVNLTLD 222
++ + + AA ++ +++ + V I + L P+ S SE + VL L
Sbjct: 631 RSNRFM---PAAITTSPTSVLSQAAVETIVNSLKPYISSLCTSENLPECEEAVLKIARLL 687
Query: 223 SESKTN------LMQPAKVSLLVDMLNE----------------------------GSVE 248
+SKTN L +P ++ LV++L+ SV+
Sbjct: 688 KDSKTNPQIHSYLSKPTIINGLVEILSASRNREVLRTSIYILSELIFTDDSVAETLNSVD 747
Query: 249 TKINC--TRLIEKLMEEK----DFRPEI--VSSHRLLIGLMRLVKNKRHPNGILPGLSLL 300
+ +C T L L E RP +S+H L+ L+ +++NK N L L+
Sbjct: 748 SDFDCLATLLKNGLAEAALLIYQLRPVFAQLSAHELIPSLVDVIQNK---NEELDDFQLV 804
Query: 301 -----RSICLLNEV--------RSL----VVSIGAVPQLVELLPSLD--PDCLQLALCIL 341
+I +L + RSL V+S +P LV+ L ++ + + LC +
Sbjct: 805 IDPKDAAIAILEQTLMGGDEYSRSLNASSVISANGIPTLVKYLERMEGRRSVVSVLLCCM 864
Query: 342 DALSSLPEGKLALKDCANTIPNTVRL 367
A K C N I N + L
Sbjct: 865 Q----------AEKSCKNLIANRIEL 880
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
+PS F C +SLE M DPV + +GQT+ER I KW +G CP T Q L ++TPN +
Sbjct: 240 VPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIV 299
Query: 126 YHLIHTW 132
+ +W
Sbjct: 300 RAFLASW 306
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 54/248 (21%)
Query: 185 KTMVDEGG--VALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVDML 242
K+++ E G V LI L + A + A L +L++ E KT + + + LVD+L
Sbjct: 497 KSLIAESGAIVPLIHVLKTGYLEEAKANSA-ATLFSLSVIEEYKTEIGEAGAIEPLVDLL 555
Query: 243 NEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNKRHPNGILPGLSLLRS 302
GS+ K KD + L +
Sbjct: 556 GSGSLSGK-------------KD------------------------------AATALFN 572
Query: 303 ICLLNEVRSLVVSIGAVPQLVELLPSLDP--DCLQLALCILDALSSLPEGKLALKDCANT 360
+ + +E ++ V+ GAV LVEL +DP ++ A+ +L L+++ EGK+A+ +
Sbjct: 573 LSIHHENKTKVIEAGAVRYLVEL---MDPAFGMVEKAVVVLANLATVREGKIAIGE-EGG 628
Query: 361 IPNTVRLLMRVSEDCTQYALSILWSICKIAPEECSSAAVDAGLAAKLFLVIQSGCNPVLK 420
IP V ++ S + A + L +C +P+ C++ + G+ L + +SG K
Sbjct: 629 IPVLVEVVELGSARGKENATAALLQLCTHSPKFCNN-VIREGVIPPLVALTKSGT-ARGK 686
Query: 421 QRSAELLK 428
+++ LLK
Sbjct: 687 EKAQNLLK 694
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 110/245 (44%), Gaps = 27/245 (11%)
Query: 58 IAELDLA--EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELW 115
I E D++ E+P F+C +S M +PV + +GQTYE+ I +W R TCP T Q L
Sbjct: 62 IPESDISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKHER-TCPKTKQVLS 120
Query: 116 DDSVTPNKTLYHLIHTW-FSQKYLLMKKRSEDV-QGRASELLGTLKKVKGQA----RVQA 169
PN + LI W KY K E V + S++ L++V + +++A
Sbjct: 121 HRLWIPNHLISDLITQWCLVNKYDHQKPSDELVAELFTSDIEALLQRVSSSSSVADQIEA 180
Query: 170 LKELHQIAAAHASARKTMVDEGGVALISSLLGPFTS--HAVGS------EAVGVLVNLTL 221
KEL + R V G I+ LL P ++ AV S V L NL++
Sbjct: 181 AKELRHQTKKFPNVRVFFV-AGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSI 239
Query: 222 DSESKTNLMQPAKV-SLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGL 280
+KT + + V LL L +G+ ET+ N + L + S++++IG
Sbjct: 240 LESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSL--------SAIDSNKIIIGN 291
Query: 281 MRLVK 285
VK
Sbjct: 292 SEAVK 296
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 143/338 (42%), Gaps = 65/338 (19%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTP--NKT 124
P FVCPI+ + DPVTL TGQTYER I +W G TCP T Q L ++ P N
Sbjct: 514 PKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQAL-SANILPKTNYV 572
Query: 125 LYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAAAHASAR 184
L LI +W Q L ++ S R S + K + + +Q + + ++
Sbjct: 573 LKRLIVSWKEQNPELAQEFSNSNTPRGSSCSPSAKDITMVSSIQRTTD--------SPSQ 624
Query: 185 KTMVDEGGVALISSLLGPFTSHAVGSEAVGVLVNLTLDSESKTNLMQPAKVSLLVDMLNE 244
K D I FT +VG+ VL + E+ N + P SL
Sbjct: 625 KYKDD-----YIRQRNNRFTRVSVGASPTSVLSQAAV--ETIINSLTPYITSLC------ 671
Query: 245 GSVETKINCTRL---IEKLMEEKDFRPEI---VSSHRLLIGLMRLVKNKRHPNGILPGLS 298
+ E +C + I +L ++ P+I +S ++ GL+ ++ + L
Sbjct: 672 -TSENLQDCEQAVLEIARLWKDSKTDPQIHSYLSKPTVVSGLVEIL------SASLNREV 724
Query: 299 LLRSICLLNEVRSLVVSIGAVPQLVELLPSLDPDCLQLALCILDAL-------------- 344
L RSI +L+E+ I + ++ E L S+D D LA+ + + L
Sbjct: 725 LRRSIYILSEL------IFSDERVGETLNSVDSDFDCLAMLLKNGLAEAALLIYQLRPVF 778
Query: 345 SSLPEGKLALKDCANTIPNTVRLLMRVSEDCTQYALSI 382
+ L E +L IP+ ++++ SED + L+I
Sbjct: 779 AQLSEHEL--------IPSLIQVIQNKSEDIDDFQLAI 808
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 35/237 (14%)
Query: 65 EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKT 124
E+P F C +S M DPV + +GQTYE+ I +W + TCPT Q L+ +TPN
Sbjct: 73 EVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN-HDLTCPTAKQVLYRVCLTPNHL 131
Query: 125 LYHLIHTW-FSQKYLLMKKRSEDVQGRASELL-----GTLKKVKGQA-----RVQALKEL 173
+ LI W + KY + D+ +EL L+++ + + +A KEL
Sbjct: 132 INELITRWCLANKYDRPAPKPSDI-DYVTELFTDGIESLLQRISSPSSSVADQTEAAKEL 190
Query: 174 HQIAAAHASARKTMVDEGGVALISSLLGPFTSHAVGSEA----------VGVLVNLTLDS 223
+ R + E + I+ LL P + +G E V L N++
Sbjct: 191 ALQTEKFVNVRDFFIKELPDS-ITRLLTPLS--VLGDEVDSNPELQENIVTALFNMSTFE 247
Query: 224 ESKTNLMQPAKV-SLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIG 279
++KT L + +V LL + +GSV T+ N T + L + + S++++IG
Sbjct: 248 KNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSD--------IDSNKIIIG 296
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 16/228 (7%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGR-----YTCPTTMQELWDDSVT 120
I F+CP++ + M +PVTL GQT+ER I KWF R +CP T +EL ++
Sbjct: 25 IYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLS 84
Query: 121 PNKTLYHLIHTWFSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARVQALKELHQIAAAH 180
P+ L + I W ++ L D+ R S LG + + ALK + +I
Sbjct: 85 PSIALRNTIEEWRARNDALKL----DI-ARQSLYLGNAET----NILLALKNVREICRNI 135
Query: 181 ASARKTMVDEGGVALISSLLGPFTSHAVGSEAVGVL-VNLTLDSESKTNLMQPAKVSLLV 239
R+ + + V LI+ +L +SH V +A+ L V + D ESK + + V +V
Sbjct: 136 RKIRQRVCNPQLVRLITDMLKS-SSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIV 194
Query: 240 DMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIGLMRLVKNK 287
L++ + + ++ +L + + +I S H +I L+ L +K
Sbjct: 195 KFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSK 242
>sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana
GN=PUB50 PE=3 SV=1
Length = 765
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%)
Query: 60 ELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSV 119
E D +IPSVF+CPI E M++P G +YE I +W S+G T P T L +
Sbjct: 683 EGDPNDIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQML 742
Query: 120 TPNKTLYHLIHTWFSQK 136
TPN TL LI W S++
Sbjct: 743 TPNHTLRSLIQDWHSKR 759
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 15/280 (5%)
Query: 51 RLDLKKMIAELDLAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTT 110
+++ K +++ E+P F+C +S + M +P+ + +GQT+E+S IL+W R TCP T
Sbjct: 50 KIESKNPESDISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHER-TCPRT 108
Query: 111 MQELWDDSVTPNKTLYHLIHTW-FSQKYLLMKKRSEDVQGRASELLGTLKKVKGQARV-- 167
Q L+ + PN + +I W + K E + +L L+++ + V
Sbjct: 109 KQVLYHRFMIPNHLINEVIKEWCLIHNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVED 168
Query: 168 --QALKELHQIAAAHASARKTMVDEGGVALISSLLGPFT----SHAVGSEAVGVLVNLTL 221
+A KEL A +S V + + I+ LL P + S+ E + +++
Sbjct: 169 QTEAAKELALKAKRFSSVCVYFVAKIPDS-ITRLLTPLSISEDSNPEFLENIVTALHIFS 227
Query: 222 DSESKTNLM--QPAKVSLLVDMLNEGSVETKINCTRLIEKLMEEKDFRPEIVSSHRLLIG 279
SE L+ P + LL + +G+V T+I+ + L D I+ + +L
Sbjct: 228 TSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSL-SYTDSNKIIIGNSEVLKA 286
Query: 280 LMRLVKNKRHPNGILPGLSLLRSICLLNEVRSLVVSIGAV 319
L+ +++ + S L ++C + E+ VS G +
Sbjct: 287 LIHVIE-EGDSLATSEAFSALSNLCPVKEISEKAVSEGLI 325
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 66 IPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTL 125
+P F C +S M DPV + +G T+ER I KWF G +CP + ++L D ++ PN L
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVEL 278
Query: 126 YHLIHTW 132
I W
Sbjct: 279 KSQISEW 285
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 53 DLKKMIAELD-LAEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTM 111
+L+K ++ D E P F+CPISLE M+DP G TYE I W G T P T
Sbjct: 311 ELRKEVSRSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTN 370
Query: 112 QELWDDSVTPNKTLYHLIHTWF 133
+L + PN L I W
Sbjct: 371 TKLHHTKLVPNLALRSAIQEWL 392
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 67 PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLY 126
PS F+CPIS E M++P G TYE ++ +W G T P T +L +++ PN L
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 127 HLIHTWFSQ 135
I W +
Sbjct: 558 SAIQEWLQR 566
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 48 VGERLDLKKMIAELDLAEI----PSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLG 103
+G R + K I EL + + P F+CPI+ E M+DPV G +YER I W S
Sbjct: 395 LGLRSKVMKKIEELKMVPVYNGTPDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTK 454
Query: 104 RYTCPTTMQELWDDSVTPNKTLYHLIHTW 132
T P T L +TPN+TL I W
Sbjct: 455 NRTSPMTNLPLQTTLLTPNRTLKMAIFRW 483
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%)
Query: 65 EIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKT 124
E P F+CPI+ + M+DP G TYE I +WF G T P + L S+ PN
Sbjct: 352 EPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLA 411
Query: 125 LYHLIHTWFSQKYLLMK 141
L I W + LL +
Sbjct: 412 LRSAIQEWLQLRELLNR 428
>sp|Q0DR28|PUB57_ORYSJ U-box domain-containing protein 57 OS=Oryza sativa subsp. japonica
GN=PUB57 PE=2 SV=1
Length = 518
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 64 AEIPSVFVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNK 123
+ +P+ F+CPIS+E M+DP G TYE I WF G P T L + ++ PN+
Sbjct: 433 SSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNR 492
Query: 124 TLYHLIHTWFSQK 136
L IH + Q+
Sbjct: 493 VLRSFIHGYLQQQ 505
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 70 FVCPISLEPMQDPVTLCTGQTYERSNILKWFSLGRYTCPTTMQELWDDSVTPNKTLYHLI 129
F CPIS+E M+DP G TYE KW G T P T + L + ++ PN TL +I
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIII 296
Query: 130 HTWFSQ 135
W +
Sbjct: 297 KDWLEK 302
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,189,420
Number of Sequences: 539616
Number of extensions: 6705895
Number of successful extensions: 18528
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 18274
Number of HSP's gapped (non-prelim): 219
length of query: 450
length of database: 191,569,459
effective HSP length: 121
effective length of query: 329
effective length of database: 126,275,923
effective search space: 41544778667
effective search space used: 41544778667
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)