Query 041256
Match_columns 244
No_of_seqs 158 out of 1100
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 08:37:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041256.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041256hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kyza2 c.66.1.12 (A:120-362) 99.9 7.3E-28 5.3E-32 200.2 13.1 130 114-243 2-131 (243)
2 d1fp1d2 c.66.1.12 (D:129-372) 99.9 2.2E-27 1.6E-31 197.2 12.0 128 116-243 3-131 (244)
3 d1fp2a2 c.66.1.12 (A:109-352) 99.9 2E-25 1.4E-29 185.4 9.9 127 116-243 2-130 (244)
4 d1qzza2 c.66.1.12 (A:102-357) 99.9 8E-23 5.8E-27 170.7 8.5 128 114-242 2-137 (256)
5 d1tw3a2 c.66.1.12 (A:99-351) C 99.8 2.5E-21 1.8E-25 161.1 8.7 112 130-242 18-136 (253)
6 d1fp2a1 a.4.5.29 (A:8-108) Iso 99.8 5.6E-21 4E-25 136.7 7.5 97 8-111 4-100 (101)
7 d1tw3a1 a.4.5.29 (A:14-98) Car 99.7 3.7E-18 2.7E-22 118.3 8.2 83 14-111 3-85 (85)
8 d1kyza1 a.4.5.29 (A:13-119) Ca 99.7 8.2E-18 5.9E-22 120.4 9.3 100 9-111 3-107 (107)
9 d1fp1d1 a.4.5.29 (D:19-128) Ch 99.7 1.2E-17 8.9E-22 119.9 9.6 103 8-111 1-109 (110)
10 d1qzza1 a.4.5.29 (A:10-101) Ac 99.7 1.2E-17 8.7E-22 117.2 7.1 88 10-109 4-91 (92)
11 d1mkma1 a.4.5.33 (A:1-75) Tran 98.0 4.4E-06 3.2E-10 54.9 5.0 57 36-104 8-64 (75)
12 d2o57a1 c.66.1.18 (A:16-297) P 97.9 3.7E-06 2.7E-10 69.0 4.6 65 168-234 43-108 (282)
13 d1p91a_ c.66.1.33 (A:) rRNA me 97.7 1.1E-05 7.9E-10 65.8 4.8 50 192-241 83-134 (268)
14 d1nkva_ c.66.1.21 (A:) Hypothe 97.7 1.8E-05 1.3E-09 63.2 6.0 51 182-234 23-74 (245)
15 d1im8a_ c.66.1.14 (A:) Hypothe 97.7 2.9E-05 2.1E-09 61.2 6.0 43 192-234 38-83 (225)
16 d2fcaa1 c.66.1.53 (A:10-213) t 97.7 2.1E-05 1.5E-09 61.7 5.0 39 194-232 30-69 (204)
17 d1yzha1 c.66.1.53 (A:8-211) tR 97.7 2.1E-05 1.5E-09 61.6 5.0 49 193-241 31-86 (204)
18 d1vl5a_ c.66.1.41 (A:) Hypothe 97.6 2.8E-05 2E-09 61.2 4.8 57 182-241 5-68 (231)
19 d1xxla_ c.66.1.41 (A:) Hypothe 97.4 4.3E-05 3.2E-09 60.5 4.3 49 183-234 7-56 (234)
20 d1nt2a_ c.66.1.3 (A:) Fibrilla 97.4 5.7E-05 4.2E-09 59.2 4.8 53 188-241 52-109 (209)
21 d2b3ta1 c.66.1.30 (A:2-275) N5 97.4 9E-05 6.6E-09 60.5 5.7 43 192-234 107-150 (274)
22 d1g8sa_ c.66.1.3 (A:) Fibrilla 97.4 4.9E-05 3.6E-09 60.5 3.8 54 187-241 69-127 (230)
23 d1l3ia_ c.66.1.22 (A:) Precorr 97.3 8.1E-05 5.9E-09 57.0 4.4 48 184-234 25-73 (186)
24 d1m6ya2 c.66.1.23 (A:2-114,A:2 97.3 0.00012 9E-09 56.5 5.2 53 181-234 12-65 (192)
25 d1pjza_ c.66.1.36 (A:) Thiopur 97.3 8.4E-05 6.1E-09 56.4 4.1 47 185-234 13-60 (201)
26 d1zx0a1 c.66.1.16 (A:8-236) Gu 97.3 4.7E-05 3.4E-09 60.4 2.6 42 192-234 52-94 (229)
27 d1wzna1 c.66.1.43 (A:1-251) Hy 97.2 0.00016 1.2E-08 57.3 4.6 49 183-234 32-81 (251)
28 d2gh1a1 c.66.1.49 (A:13-293) M 97.1 0.00015 1.1E-08 59.1 4.2 52 183-234 17-70 (281)
29 d1u2za_ c.66.1.31 (A:) Catalyt 97.1 0.00019 1.4E-08 61.7 4.9 51 182-233 206-257 (406)
30 d1xtpa_ c.66.1.42 (A:) Hypothe 97.1 0.00014 1E-08 58.6 3.7 51 182-234 83-134 (254)
31 d1dusa_ c.66.1.4 (A:) Hypothet 97.0 0.00018 1.3E-08 55.3 3.4 49 183-234 43-92 (194)
32 d2i6ga1 c.66.1.44 (A:1-198) Pu 97.0 0.0003 2.2E-08 54.0 4.6 48 183-233 21-69 (198)
33 d1ne2a_ c.66.1.32 (A:) Hypothe 97.0 0.00024 1.8E-08 55.0 3.7 49 191-241 47-97 (197)
34 d2ex4a1 c.66.1.42 (A:2-224) Ad 96.9 0.00014 1E-08 57.0 2.2 43 191-234 58-101 (222)
35 d2p7ia1 c.66.1.41 (A:22-246) H 96.9 0.00022 1.6E-08 56.0 3.2 49 191-241 18-69 (225)
36 d1ve3a1 c.66.1.43 (A:2-227) Hy 96.9 0.00038 2.8E-08 53.9 4.4 48 183-234 29-77 (226)
37 d2nxca1 c.66.1.39 (A:1-254) Pr 96.9 0.00025 1.8E-08 57.2 3.3 62 168-234 98-160 (254)
38 d1nw3a_ c.66.1.31 (A:) Catalyt 96.9 0.00055 4E-08 57.0 5.6 51 182-233 141-192 (328)
39 d2fk8a1 c.66.1.18 (A:22-301) M 96.8 0.00036 2.6E-08 56.9 4.0 50 182-233 42-92 (280)
40 d1dl5a1 c.66.1.7 (A:1-213) Pro 96.8 0.00074 5.4E-08 52.7 5.5 51 183-234 66-118 (213)
41 d1xvaa_ c.66.1.5 (A:) Glycine 96.8 0.00041 3E-08 56.6 3.9 40 192-233 55-95 (292)
42 d1ri5a_ c.66.1.34 (A:) mRNA ca 96.8 0.00053 3.8E-08 54.7 4.5 48 183-233 16-64 (252)
43 d1y8ca_ c.66.1.43 (A:) Putativ 96.8 0.00019 1.4E-08 56.9 1.8 40 193-234 37-77 (246)
44 d2avna1 c.66.1.41 (A:1-246) Hy 96.8 0.00033 2.4E-08 55.0 3.1 41 192-234 41-82 (246)
45 d1kpga_ c.66.1.18 (A:) CmaA1 { 96.6 0.00073 5.4E-08 55.2 4.0 49 182-232 52-101 (285)
46 d2bzga1 c.66.1.36 (A:17-245) T 96.5 0.00085 6.2E-08 52.6 4.0 41 191-233 43-84 (229)
47 d2h00a1 c.66.1.54 (A:5-254) Me 96.4 0.00057 4.1E-08 54.8 2.5 43 192-234 60-103 (250)
48 d1o54a_ c.66.1.13 (A:) Hypothe 96.4 0.0015 1.1E-07 52.7 5.0 66 168-234 75-146 (266)
49 d1yb2a1 c.66.1.13 (A:6-255) Hy 96.4 0.0011 8.1E-08 53.1 4.1 66 168-234 57-128 (250)
50 d1kpia_ c.66.1.18 (A:) CmaA2 { 96.4 0.0016 1.2E-07 53.2 5.3 42 182-225 51-92 (291)
51 d1jqea_ c.66.1.19 (A:) Histami 96.4 0.0011 8E-08 53.4 3.9 52 182-233 29-87 (280)
52 d1i9ga_ c.66.1.13 (A:) Probabl 96.3 0.0018 1.3E-07 52.2 5.0 66 168-234 68-139 (264)
53 d1vlma_ c.66.1.41 (A:) Possibl 96.3 0.001 7.5E-08 51.0 3.3 34 195-234 38-72 (208)
54 d1ub9a_ a.4.5.28 (A:) Hypothet 96.3 0.0012 9E-08 44.9 3.3 63 33-105 16-81 (100)
55 d1wy7a1 c.66.1.32 (A:4-204) Hy 96.1 0.0015 1.1E-07 50.5 3.1 42 191-234 45-87 (201)
56 d2esra1 c.66.1.46 (A:28-179) P 96.0 0.0029 2.1E-07 46.4 4.4 41 193-234 14-55 (152)
57 d2fyta1 c.66.1.6 (A:238-548) P 96.0 0.0044 3.2E-07 50.7 5.8 38 192-230 34-71 (311)
58 d1r1ta_ a.4.5.5 (A:) SmtB repr 95.8 0.0037 2.7E-07 42.5 3.7 52 28-90 18-69 (98)
59 d1i1na_ c.66.1.7 (A:) Protein- 95.7 0.0064 4.7E-07 47.5 5.3 52 183-234 65-119 (224)
60 d1lvaa3 a.4.5.35 (A:511-574) C 95.7 0.01 7.4E-07 36.9 5.2 53 37-100 11-63 (64)
61 d1oria_ c.66.1.6 (A:) Protein 95.7 0.0029 2.1E-07 52.0 3.3 38 194-232 34-71 (316)
62 d1g6q1_ c.66.1.6 (1:) Arginine 95.7 0.0033 2.4E-07 51.9 3.7 39 194-233 39-77 (328)
63 d1sfxa_ a.4.5.50 (A:) Hypothet 95.7 0.0043 3.1E-07 42.9 3.7 44 37-90 24-67 (109)
64 d2b25a1 c.66.1.13 (A:6-329) Hy 95.6 0.0053 3.9E-07 50.8 4.8 66 167-233 69-140 (324)
65 d1z05a1 a.4.5.63 (A:10-80) Tra 95.5 0.0064 4.7E-07 38.5 4.0 44 36-89 9-52 (71)
66 d1u2wa1 a.4.5.5 (A:12-119) Cad 95.5 0.0063 4.6E-07 42.1 4.2 55 26-90 24-78 (108)
67 d1biaa1 a.4.5.1 (A:1-63) Bioti 95.5 0.0096 7E-07 36.8 4.6 55 35-101 7-61 (63)
68 d1g8aa_ c.66.1.3 (A:) Fibrilla 95.5 0.0031 2.3E-07 49.5 2.8 43 191-233 71-115 (227)
69 d1r1ua_ a.4.5.5 (A:) Metal-sen 95.5 0.005 3.6E-07 41.5 3.5 53 27-90 12-64 (94)
70 d1uira_ c.66.1.17 (A:) Spermid 95.4 0.0037 2.7E-07 51.5 3.0 43 192-234 76-119 (312)
71 d2hoea1 a.4.5.63 (A:10-71) N-a 95.2 0.0074 5.4E-07 37.3 3.3 42 37-89 3-44 (62)
72 d1nv8a_ c.66.1.30 (A:) N5-glut 95.1 0.0045 3.3E-07 50.0 2.6 41 193-234 110-151 (271)
73 d1j5ya1 a.4.5.1 (A:3-67) Putat 95.1 0.017 1.2E-06 35.9 4.7 56 35-102 9-64 (65)
74 d1s3ja_ a.4.5.28 (A:) Putative 95.1 0.025 1.9E-06 40.4 6.5 62 36-107 38-102 (143)
75 d1ws6a1 c.66.1.46 (A:15-185) M 95.0 0.0069 5E-07 45.2 3.3 42 191-234 39-81 (171)
76 d1lnwa_ a.4.5.28 (A:) MexR rep 95.0 0.031 2.2E-06 39.9 6.9 47 35-91 38-84 (141)
77 d1z6ra1 a.4.5.63 (A:12-81) Mlc 95.0 0.013 9.4E-07 37.0 4.1 44 36-89 8-51 (70)
78 d2d1ha1 a.4.5.50 (A:1-109) Hyp 95.0 0.0059 4.3E-07 42.0 2.7 44 38-90 26-69 (109)
79 d1vbfa_ c.66.1.7 (A:) Protein- 95.0 0.01 7.4E-07 46.4 4.2 56 183-241 61-121 (224)
80 d1iy9a_ c.66.1.17 (A:) Spermid 94.8 0.0072 5.2E-07 48.8 3.1 43 192-234 74-117 (274)
81 d1xd7a_ a.4.5.55 (A:) Hypothet 94.8 0.017 1.2E-06 40.8 4.6 34 49-89 17-50 (127)
82 d2o07a1 c.66.1.17 (A:16-300) S 94.8 0.0073 5.3E-07 49.0 3.0 44 191-234 76-120 (285)
83 d1ylfa1 a.4.5.55 (A:5-142) Hyp 94.7 0.014 1.1E-06 41.8 4.2 45 49-102 22-66 (138)
84 d1mjfa_ c.66.1.17 (A:) Putativ 94.6 0.0094 6.9E-07 48.1 3.1 42 192-234 71-113 (276)
85 d2p4wa1 a.4.5.64 (A:1-194) Tra 94.6 0.015 1.1E-06 44.2 4.2 66 29-105 11-81 (194)
86 d1inla_ c.66.1.17 (A:) Spermid 94.4 0.0096 7E-07 48.5 2.9 43 192-234 88-131 (295)
87 d2b2ca1 c.66.1.17 (A:3-314) Sp 94.4 0.011 7.7E-07 48.6 3.2 43 192-234 105-148 (312)
88 d2hr3a1 a.4.5.28 (A:2-146) Pro 94.3 0.021 1.5E-06 41.0 4.4 64 34-106 35-101 (145)
89 d2etha1 a.4.5.28 (A:1-140) Put 94.3 0.018 1.3E-06 41.1 3.9 62 34-105 33-97 (140)
90 d2a14a1 c.66.1.15 (A:5-261) In 94.3 0.0021 1.5E-07 50.7 -1.4 42 192-234 50-92 (257)
91 d2a61a1 a.4.5.28 (A:5-143) Tra 94.3 0.042 3.1E-06 39.0 5.9 62 37-108 34-98 (139)
92 d1ku9a_ a.4.5.36 (A:) DNA-bind 94.2 0.018 1.3E-06 41.5 3.8 45 37-90 30-74 (151)
93 d1jg1a_ c.66.1.7 (A:) Protein- 94.1 0.025 1.8E-06 43.7 4.7 50 183-234 69-119 (215)
94 d3ctaa1 a.4.5.28 (A:5-89) Ta10 94.1 0.0088 6.4E-07 39.4 1.6 49 49-105 20-69 (85)
95 d1wg8a2 c.66.1.23 (A:5-108,A:2 93.9 0.034 2.5E-06 41.8 5.0 57 181-240 7-66 (182)
96 d1yuba_ c.66.1.24 (A:) rRNA ad 93.8 0.019 1.4E-06 45.3 3.6 51 181-234 18-69 (245)
97 d1qama_ c.66.1.24 (A:) rRNA ad 93.8 0.061 4.4E-06 42.0 6.5 58 181-241 10-72 (235)
98 d1xj5a_ c.66.1.17 (A:) Spermid 93.8 0.017 1.2E-06 46.9 3.1 43 192-234 79-122 (290)
99 d2frna1 c.66.1.47 (A:19-278) H 93.7 0.014 1E-06 46.5 2.6 42 192-234 106-148 (260)
100 d1dpua_ a.4.5.16 (A:) C-termin 93.6 0.068 5E-06 33.4 5.2 58 36-102 9-67 (69)
101 d1ulya_ a.4.5.58 (A:) Hypothet 93.6 0.03 2.2E-06 42.1 4.2 68 26-104 12-84 (190)
102 d3broa1 a.4.5.28 (A:3-137) Tra 93.6 0.031 2.2E-06 39.5 3.9 67 34-108 30-99 (135)
103 d1r18a_ c.66.1.7 (A:) Protein- 93.5 0.047 3.4E-06 42.4 5.3 51 183-233 69-127 (223)
104 d2fpoa1 c.66.1.46 (A:10-192) M 93.2 0.022 1.6E-06 42.8 2.7 39 195-234 45-84 (183)
105 d2bv6a1 a.4.5.28 (A:5-140) Tra 93.2 0.033 2.4E-06 39.5 3.6 61 35-105 36-99 (136)
106 d1r7ja_ a.4.5.49 (A:) Sso10a ( 93.0 0.037 2.7E-06 36.7 3.3 57 39-108 9-65 (90)
107 d2hzta1 a.4.5.69 (A:4-98) Puta 92.9 0.075 5.4E-06 35.4 4.8 53 49-108 23-79 (95)
108 d2cyya1 a.4.5.32 (A:5-64) Puta 92.7 0.045 3.3E-06 33.2 3.2 45 34-88 4-48 (60)
109 d1i1ga1 a.4.5.32 (A:2-61) LprA 92.7 0.042 3.1E-06 33.4 3.0 44 35-88 5-48 (60)
110 d2cfxa1 a.4.5.32 (A:1-63) Tran 92.6 0.057 4.2E-06 33.1 3.6 45 34-88 6-50 (63)
111 d2fbha1 a.4.5.28 (A:8-144) Tra 92.5 0.048 3.5E-06 38.5 3.6 44 38-90 33-76 (137)
112 d2g72a1 c.66.1.15 (A:18-280) P 92.3 0.013 9.3E-07 46.7 0.3 41 192-233 53-94 (263)
113 d2cg4a1 a.4.5.32 (A:4-66) Regu 92.1 0.051 3.7E-06 33.3 2.9 45 34-88 6-50 (63)
114 d1ej0a_ c.66.1.2 (A:) RNA meth 92.1 0.14 9.9E-06 38.2 6.0 46 182-227 11-57 (180)
115 d1jgsa_ a.4.5.28 (A:) Multiple 92.1 0.05 3.7E-06 38.6 3.4 63 35-107 36-101 (138)
116 d2cl5a1 c.66.1.1 (A:3-216) Cat 91.9 0.058 4.2E-06 41.5 3.7 43 192-234 55-99 (214)
117 d1z91a1 a.4.5.28 (A:8-144) Org 91.9 0.035 2.6E-06 39.3 2.3 61 38-108 38-101 (137)
118 d2gxba1 a.4.5.19 (A:140-198) Z 91.7 0.14 1E-05 30.5 4.4 43 38-90 7-49 (59)
119 d1xdza_ c.66.1.20 (A:) Glucose 91.6 0.057 4.1E-06 42.4 3.4 35 191-225 68-102 (239)
120 d2ih2a1 c.66.1.27 (A:21-243) D 91.5 0.13 9.4E-06 38.8 5.3 46 184-230 11-58 (223)
121 d2frha1 a.4.5.28 (A:102-216) P 91.3 0.068 4.9E-06 36.8 3.2 60 38-105 38-100 (115)
122 d2fhpa1 c.66.1.46 (A:1-182) Pu 91.3 0.093 6.8E-06 39.1 4.2 41 193-234 41-82 (182)
123 d3deua1 a.4.5.28 (A:2-141) Tra 90.9 0.091 6.6E-06 37.1 3.6 62 38-108 36-100 (140)
124 d2fbia1 a.4.5.28 (A:5-140) Pro 90.8 0.16 1.2E-05 35.6 5.0 60 36-105 33-95 (136)
125 d1hsja1 a.4.5.28 (A:373-487) S 90.7 0.087 6.3E-06 36.2 3.3 46 38-91 37-82 (115)
126 d1lj9a_ a.4.5.28 (A:) Transcri 90.5 0.11 7.8E-06 37.0 3.8 43 38-90 34-76 (144)
127 d1jsxa_ c.66.1.20 (A:) Glucose 90.5 0.12 8.7E-06 39.5 4.2 32 194-225 66-97 (207)
128 d1j75a_ a.4.5.19 (A:) Dlm-1 {M 90.4 0.1 7.4E-06 30.5 2.8 54 35-100 3-56 (57)
129 d2as0a2 c.66.1.51 (A:73-396) H 89.8 0.085 6.2E-06 43.1 3.0 42 192-234 144-186 (324)
130 d1q1ha_ a.4.5.41 (A:) Transcri 89.6 0.2 1.5E-05 32.6 4.1 45 37-90 22-66 (88)
131 d2fswa1 a.4.5.69 (A:3-104) Hyp 89.4 0.12 8.9E-06 34.8 3.1 76 13-108 9-88 (102)
132 d2fxaa1 a.4.5.28 (A:6-167) Pro 89.3 0.39 2.8E-05 34.9 6.1 58 38-105 46-106 (162)
133 d2fbka1 a.4.5.28 (A:8-179) Tra 89.2 0.056 4E-06 40.0 1.3 46 38-90 67-112 (172)
134 d1xmka1 a.4.5.19 (A:294-366) Z 89.2 0.15 1.1E-05 32.1 3.1 61 34-104 6-66 (73)
135 d1jhfa1 a.4.5.2 (A:2-72) LexA 89.1 0.27 2E-05 30.6 4.4 35 49-89 23-57 (71)
136 d1z7ua1 a.4.5.69 (A:1-108) Hyp 88.9 0.15 1.1E-05 34.8 3.2 76 13-108 8-87 (108)
137 d1p4xa2 a.4.5.28 (A:126-250) S 88.5 0.13 9.8E-06 35.8 2.9 61 37-105 37-100 (125)
138 d2avda1 c.66.1.1 (A:44-262) CO 88.4 0.16 1.2E-05 39.1 3.5 44 191-234 57-102 (219)
139 d1yyva1 a.4.5.69 (A:9-122) Put 88.3 0.11 8.3E-06 35.7 2.3 76 13-108 13-92 (114)
140 d2ev0a1 a.4.5.24 (A:2-62) Mang 88.3 0.26 1.9E-05 29.8 3.8 34 49-89 20-53 (61)
141 d2f2ea1 a.4.5.69 (A:5-146) Hyp 88.2 0.29 2.1E-05 34.9 4.6 73 16-108 12-86 (142)
142 d1p4xa1 a.4.5.28 (A:1-125) Sta 88.2 0.17 1.3E-05 35.1 3.3 47 36-90 37-83 (125)
143 d3bwga1 a.4.5.6 (A:5-82) Trans 87.5 0.44 3.2E-05 30.0 4.7 43 49-100 20-63 (78)
144 d1zq9a1 c.66.1.24 (A:36-313) P 87.2 0.29 2.1E-05 39.0 4.5 43 181-224 10-52 (278)
145 d1wxxa2 c.66.1.51 (A:65-382) H 87.2 0.15 1.1E-05 41.4 2.8 40 193-234 145-185 (318)
146 d2hs5a1 a.4.5.6 (A:25-93) Puta 86.8 0.37 2.7E-05 29.7 3.9 43 49-100 24-66 (69)
147 d1qyra_ c.66.1.24 (A:) High le 86.5 0.26 1.9E-05 38.7 3.8 50 181-232 10-59 (252)
148 d2isya1 a.4.5.24 (A:2-64) Iron 86.3 0.71 5.2E-05 27.9 5.0 34 49-89 22-55 (63)
149 d2p41a1 c.66.1.25 (A:8-264) An 85.8 0.39 2.9E-05 37.6 4.4 42 183-225 57-98 (257)
150 d1hw1a1 a.4.5.6 (A:5-78) Fatty 84.0 0.62 4.5E-05 29.1 4.0 42 49-99 25-67 (74)
151 d2f8la1 c.66.1.45 (A:2-329) Hy 83.5 0.53 3.8E-05 37.8 4.5 42 192-233 116-163 (328)
152 d1bl0a1 a.4.1.8 (A:9-62) MarA 83.1 0.69 5E-05 26.7 3.8 42 38-87 8-49 (54)
153 d1sfua_ a.4.5.19 (A:) 34L {Yab 83.1 1.5 0.00011 26.9 5.4 36 48-90 22-57 (70)
154 d1susa1 c.66.1.1 (A:21-247) Ca 81.6 0.47 3.4E-05 36.5 3.3 43 192-234 58-102 (227)
155 d2igta1 c.66.1.51 (A:1-309) Pu 81.5 0.47 3.5E-05 38.3 3.4 42 191-234 130-172 (309)
156 d1nd9a_ a.6.1.6 (A:) N-termina 80.0 0.32 2.3E-05 28.0 1.3 28 51-88 3-30 (49)
157 d1cf7a_ a.4.5.17 (A:) Cell cyc 79.4 0.61 4.4E-05 28.7 2.5 43 40-89 16-58 (67)
158 d2obpa1 a.4.5.71 (A:12-92) Put 79.3 0.9 6.5E-05 28.4 3.3 51 48-105 22-73 (81)
159 d1uwva2 c.66.1.40 (A:75-432) r 79.3 0.8 5.9E-05 37.1 4.2 48 184-234 204-252 (358)
160 d1zyba1 a.4.5.4 (A:148-220) Pr 78.0 1 7.5E-05 27.9 3.5 41 50-101 27-67 (73)
161 d1okra_ a.4.5.39 (A:) Methicil 77.9 0.54 3.9E-05 32.1 2.2 47 34-90 8-58 (120)
162 d1i5za1 a.4.5.4 (A:138-206) Ca 75.6 0.95 6.9E-05 27.5 2.8 33 50-89 29-61 (69)
163 d2dk5a1 a.4.5.85 (A:8-85) DNA- 75.0 1.6 0.00012 27.4 3.8 44 38-89 18-61 (78)
164 d1d5ya1 a.4.1.8 (A:3-56) Rob t 74.8 1.7 0.00012 24.9 3.6 41 37-85 7-47 (54)
165 d2gaua1 a.4.5.4 (A:152-232) Tr 74.6 1.5 0.00011 27.3 3.7 34 49-89 28-61 (81)
166 d2g9wa1 a.4.5.39 (A:3-124) Hyp 74.1 1.6 0.00012 29.7 4.0 52 34-90 8-59 (122)
167 d1ft9a1 a.4.5.4 (A:134-213) CO 71.8 1.5 0.00011 27.3 3.1 33 50-89 30-62 (80)
168 d2ifta1 c.66.1.46 (A:11-193) P 71.7 1.4 0.0001 32.3 3.3 38 195-233 45-83 (183)
169 d2zcwa1 a.4.5.4 (A:118-199) Tr 71.6 1.3 9.6E-05 27.8 2.8 33 50-89 29-61 (82)
170 d1s6la1 a.4.5.79 (A:21-80) Alk 70.6 1.2 9E-05 26.3 2.2 39 38-89 7-45 (60)
171 d1v4ra1 a.4.5.6 (A:1-100) Tran 70.0 1.5 0.00011 28.9 2.8 42 49-99 31-73 (100)
172 d1stza1 a.4.5.51 (A:14-100) He 69.9 3.2 0.00023 26.6 4.4 36 49-89 22-57 (87)
173 d1xn7a_ a.4.5.62 (A:) Hypothet 67.5 4.6 0.00034 24.9 4.5 43 38-90 7-49 (78)
174 d3e5ua1 a.4.5.4 (A:148-227) Ch 67.2 2.2 0.00016 26.5 3.1 34 49-89 29-62 (80)
175 d1i4wa_ c.66.1.24 (A:) Transcr 66.8 3.5 0.00025 32.9 5.1 33 193-225 43-75 (322)
176 d2b78a2 c.66.1.51 (A:69-385) H 65.4 1.7 0.00012 34.9 2.8 43 191-234 142-185 (317)
177 d1zkda1 c.66.1.52 (A:2-366) Hy 64.3 4 0.00029 33.1 5.0 64 162-230 53-123 (365)
178 d1lvaa4 a.4.5.35 (A:575-634) C 64.0 11 0.00081 22.1 5.8 48 38-98 9-56 (60)
179 d1sfea1 a.4.2.1 (A:93-176) Ada 62.0 3.2 0.00023 26.4 3.1 45 34-86 4-48 (84)
180 d2uyoa1 c.66.1.57 (A:14-310) P 61.4 4.9 0.00036 31.7 4.9 62 167-231 65-126 (297)
181 d2dula1 c.66.1.58 (A:3-377) N( 60.7 3.4 0.00024 33.9 3.9 41 194-234 46-87 (375)
182 d2py6a1 c.66.1.56 (A:14-408) M 59.9 4.1 0.0003 33.6 4.3 41 191-231 210-253 (395)
183 d1p6ra_ a.4.5.39 (A:) Penicill 59.0 4.4 0.00032 25.4 3.4 51 34-90 10-60 (82)
184 d1o1xa_ c.121.1.1 (A:) Putativ 56.5 2.4 0.00018 29.9 1.9 40 200-239 65-104 (145)
185 d2vvpa1 c.121.1.1 (A:3-158) Al 55.6 2.8 0.0002 30.0 2.2 41 200-240 65-105 (156)
186 d1af7a2 c.66.1.8 (A:92-284) Ch 55.6 3.9 0.00028 29.9 3.1 42 192-233 23-73 (193)
187 d1l0oc_ a.4.13.2 (C:) SigmaF { 55.5 4 0.00029 23.7 2.6 25 49-80 30-54 (57)
188 d1u5ta2 a.4.5.54 (A:165-232) V 55.0 8.4 0.00061 23.3 4.1 35 49-90 16-50 (68)
189 d1gdta1 a.4.1.2 (A:141-183) ga 54.6 6.1 0.00044 21.6 3.0 24 49-79 17-40 (43)
190 d1rjda_ c.66.1.37 (A:) Leucine 54.2 6.2 0.00045 31.5 4.4 38 194-231 97-134 (328)
191 d1sd4a_ a.4.5.39 (A:) Penicill 53.9 5.9 0.00043 26.7 3.7 51 34-90 7-57 (122)
192 d1mzba_ a.4.5.42 (A:) Ferric u 52.8 4 0.00029 27.9 2.6 52 35-89 18-69 (134)
193 d1xmaa_ a.4.5.61 (A:) Predicte 52.1 4.1 0.0003 26.7 2.5 62 38-105 12-81 (103)
194 d2zgya2 c.55.1.1 (A:158-320) P 51.9 15 0.0011 25.0 5.9 62 168-229 90-153 (163)
195 d2bgca1 a.4.5.4 (A:138-237) Li 51.7 6.8 0.0005 25.5 3.5 59 23-89 4-64 (100)
196 d2p8ta1 a.4.5.72 (A:14-82) Hyp 50.2 11 0.00077 22.9 4.0 47 49-106 16-62 (69)
197 d2bm8a1 c.66.1.50 (A:2-233) Ce 50.1 7.2 0.00052 29.5 3.9 33 193-225 80-116 (232)
198 d1jhga_ a.4.12.1 (A:) Trp repr 48.6 8.3 0.00061 25.2 3.5 40 31-81 43-82 (101)
199 d1eucb1 c.23.4.1 (B:246-393) S 48.4 6.9 0.00051 27.5 3.3 41 183-225 36-80 (148)
200 d2iida1 c.3.1.2 (A:4-319,A:433 47.8 5.3 0.00038 30.4 2.9 36 191-226 27-62 (370)
201 d1ku3a_ a.4.13.2 (A:) Sigma70 47.5 6.2 0.00045 23.2 2.5 24 49-79 27-50 (61)
202 d2o3fa1 a.4.1.20 (A:1-83) Puta 46.5 6.7 0.00049 24.6 2.7 30 50-86 36-65 (83)
203 d1qnta1 a.4.2.1 (A:92-176) O6- 45.2 14 0.001 23.1 4.2 40 38-85 8-47 (85)
204 d1a04a1 a.4.6.2 (A:150-216) Ni 45.1 8.3 0.0006 22.8 2.9 25 34-63 10-34 (67)
205 d1efaa1 a.35.1.5 (A:2-60) Lac 44.6 7.7 0.00056 22.7 2.6 14 50-63 2-15 (59)
206 d2jn6a1 a.4.1.19 (A:1-89) Unch 44.4 5.5 0.0004 25.2 2.0 25 50-81 23-47 (89)
207 d2htja1 a.4.5.73 (A:1-73) P fi 44.2 13 0.00097 22.0 3.6 44 37-90 4-47 (73)
208 d1l3la1 a.4.6.2 (A:170-234) Qu 43.4 7.8 0.00057 22.8 2.6 25 34-63 8-32 (65)
209 d1uxda_ a.35.1.5 (A:) Fructose 42.2 7.3 0.00053 22.7 2.2 13 51-63 1-13 (59)
210 d1mgta1 a.4.2.1 (A:89-169) O6- 41.3 10 0.00074 23.7 3.0 29 35-63 5-34 (81)
211 d2nu7b1 c.23.4.1 (B:239-388) S 40.9 15 0.0011 25.7 4.1 41 183-225 36-80 (150)
212 d1fsea_ a.4.6.2 (A:) Germinati 40.8 9.5 0.00069 22.5 2.7 25 34-63 8-32 (67)
213 d1kola2 c.2.1.1 (A:161-355) Fo 40.6 13 0.00092 27.0 3.9 44 191-234 23-68 (195)
214 d1m6ex_ c.66.1.35 (X:) Salicyl 40.4 13 0.00092 30.1 4.2 35 192-226 50-100 (359)
215 d2esha1 a.4.5.61 (A:4-117) Hyp 40.3 22 0.0016 23.3 4.8 62 38-105 15-84 (114)
216 d2hsga1 a.35.1.5 (A:2-58) Gluc 40.2 9.2 0.00067 22.1 2.4 13 51-63 2-14 (57)
217 d2okca1 c.66.1.45 (A:9-433) Ty 39.8 12 0.00091 30.5 4.2 31 184-215 154-184 (425)
218 d1ps9a3 c.4.1.1 (A:331-465,A:6 38.8 17 0.0013 25.9 4.4 34 192-225 41-74 (179)
219 d2p7vb1 a.4.13.2 (B:546-613) S 36.7 9.7 0.00071 22.9 2.2 24 49-79 24-47 (68)
220 d1vz0a1 a.4.14.1 (A:116-208) P 36.6 13 0.00094 23.7 3.0 26 50-82 19-44 (93)
221 d1rp3a1 a.4.13.1 (A:87-163) Si 36.2 7.3 0.00053 23.8 1.6 33 49-88 25-57 (77)
222 d2dt5a1 a.4.5.38 (A:4-77) Tran 35.3 11 0.0008 23.1 2.3 41 37-88 13-53 (74)
223 d1hsta_ a.4.5.13 (A:) Histone 35.1 16 0.0011 22.2 3.1 52 49-101 20-73 (74)
224 d1rp3a2 a.4.13.2 (A:164-234) S 34.3 15 0.0011 21.4 3.0 15 49-63 36-50 (71)
225 d2gjca1 c.3.1.6 (A:16-326) Thi 34.1 15 0.0011 28.3 3.6 32 195-226 51-84 (311)
226 d1r71a_ a.4.14.1 (A:) Transcri 34.0 13 0.00096 24.3 2.8 26 50-82 30-55 (114)
227 d1ldja3 e.40.1.1 (A:411-686) C 33.9 11 0.00081 28.9 2.7 34 49-89 208-241 (276)
228 d1yioa1 a.4.6.2 (A:131-200) Re 33.4 15 0.0011 21.8 2.7 27 32-63 14-40 (70)
229 d2a6ca1 a.35.1.13 (A:1-69) HTH 33.3 20 0.0015 21.0 3.4 36 49-86 18-61 (69)
230 d1pdoa_ c.54.1.1 (A:) IIA doma 33.2 19 0.0014 24.0 3.7 51 183-233 50-102 (129)
231 d1vpta_ c.66.1.25 (A:) Polymer 32.8 13 0.00095 29.0 2.9 49 192-240 59-111 (297)
232 d2fq3a1 a.4.1.18 (A:311-395) T 32.7 47 0.0035 20.5 5.3 52 29-88 31-82 (85)
233 d2dw4a1 a.4.1.18 (A:172-273) L 32.6 57 0.0041 20.8 6.1 67 19-89 27-93 (102)
234 d1djqa3 c.4.1.1 (A:341-489,A:6 32.2 18 0.0013 26.4 3.7 34 192-225 47-80 (233)
235 d2b0la1 a.4.5.66 (A:167-257) G 31.9 6.8 0.0005 24.5 0.8 44 37-89 23-66 (91)
236 d1nn4a_ c.121.1.1 (A:) Alterna 31.8 6.3 0.00046 28.1 0.8 34 202-235 79-112 (159)
237 d1ttya_ a.4.13.2 (A:) Sigma70 31.8 12 0.0009 23.6 2.2 15 49-63 37-51 (87)
238 d1oywa1 a.4.5.43 (A:407-516) D 30.3 15 0.0011 23.9 2.6 39 70-110 60-98 (110)
239 d1rp0a1 c.3.1.6 (A:7-284) Thia 29.2 18 0.0013 27.1 3.3 29 197-225 36-65 (278)
240 d2icta1 a.35.1.3 (A:8-94) Anti 29.1 17 0.0012 22.6 2.6 15 49-63 13-27 (87)
241 d1qpza1 a.35.1.5 (A:2-58) Puri 27.9 17 0.0012 20.9 2.2 12 52-63 2-13 (57)
242 d1ghca_ a.4.5.13 (A:) Histone 27.9 14 0.00099 22.6 1.8 50 49-101 21-74 (75)
243 d1jt6a1 a.4.1.9 (A:2-72) Multi 27.5 30 0.0022 20.1 3.4 22 41-63 13-34 (71)
244 d2v9va2 a.4.5.35 (A:438-510) C 27.4 25 0.0018 20.8 3.1 46 49-103 25-70 (73)
245 d2fsja1 c.55.1.12 (A:165-325) 27.1 10 0.00075 26.1 1.3 13 193-205 6-18 (161)
246 d1onfa2 c.3.1.5 (A:154-270) Gl 26.3 52 0.0038 21.1 4.9 35 191-225 19-53 (117)
247 d1or7a1 a.4.13.2 (A:120-187) S 26.1 27 0.0019 20.2 3.0 15 49-63 33-47 (68)
248 d1booa_ c.66.1.11 (A:) m.PvuII 25.9 31 0.0023 25.9 4.2 50 181-234 240-290 (320)
249 d2ar0a1 c.66.1.45 (A:6-529) M. 25.7 23 0.0017 29.7 3.6 30 184-214 156-185 (524)
250 d1in4a1 a.4.5.11 (A:255-329) H 25.1 35 0.0025 20.8 3.3 57 37-104 9-66 (75)
251 d2g7ga1 a.4.1.9 (A:9-73) Putat 24.9 22 0.0016 20.6 2.4 15 49-63 18-32 (65)
252 d1piwa2 c.2.1.1 (A:153-320) Ci 24.9 39 0.0028 23.2 4.2 42 191-233 25-68 (168)
253 d1t6sa1 a.4.5.60 (A:1-85) Segr 24.7 33 0.0024 21.1 3.4 29 49-82 21-49 (85)
254 d2giva1 d.108.1.1 (A:4-274) Pr 24.7 29 0.0021 26.6 3.6 31 49-89 202-232 (271)
255 d2g7la1 a.4.1.9 (A:16-83) Puta 24.5 20 0.0015 20.9 2.1 23 40-63 15-37 (68)
256 d1yg2a_ a.4.5.61 (A:) Hypothet 24.5 29 0.0021 24.3 3.4 63 37-105 5-75 (178)
257 d1v7ba1 a.4.1.9 (A:1-74) Trans 24.4 30 0.0022 20.3 3.0 23 40-63 15-37 (74)
258 d1ku2a1 a.4.13.1 (A:273-332) S 24.2 18 0.0013 21.0 1.8 15 49-63 27-41 (60)
259 d1vola1 a.74.1.2 (A:113-207) T 24.1 62 0.0045 19.8 4.8 41 25-82 47-87 (95)
260 d1hkva2 c.1.6.1 (A:46-310) Dia 23.9 18 0.0013 27.3 2.3 12 195-206 205-216 (265)
261 d2fnaa1 a.4.5.11 (A:284-356) H 23.5 26 0.0019 21.3 2.5 24 74-101 41-64 (73)
262 d1ixca1 a.4.5.37 (A:1-89) LysR 23.4 22 0.0016 22.1 2.3 59 35-109 5-66 (89)
263 d2ns0a1 a.4.5.76 (A:1-85) Hypo 23.3 72 0.0052 19.7 4.7 54 34-89 8-61 (85)
264 d2gmga1 a.4.5.82 (A:1-105) Hyp 22.4 37 0.0027 22.0 3.3 26 34-63 12-37 (105)
265 d1r8da_ a.6.1.3 (A:) Multidrug 22.3 30 0.0022 22.1 2.9 29 51-90 3-31 (109)
266 d1knwa2 c.1.6.1 (A:32-278) Dia 22.2 13 0.00095 27.8 1.1 11 195-205 188-198 (247)
267 d1twia2 c.1.6.1 (A:50-313) Dia 22.1 13 0.00097 28.1 1.1 12 195-206 207-218 (264)
268 d1ufma_ a.4.5.47 (A:) COP9 sig 21.8 31 0.0023 21.2 2.8 33 49-88 29-61 (84)
269 d1r8ea1 a.6.1.3 (A:3-120) Tran 20.8 28 0.0021 22.6 2.5 27 51-88 4-30 (118)
270 d1e3ia2 c.2.1.1 (A:168-341) Al 20.5 82 0.006 21.7 5.3 43 191-233 26-70 (174)
271 d1pb6a1 a.4.1.9 (A:14-85) Hypo 20.5 48 0.0035 19.2 3.4 23 40-63 15-37 (72)
272 d2fq4a1 a.4.1.9 (A:9-77) Trans 20.3 36 0.0027 19.7 2.8 23 40-63 15-37 (69)
273 d1q06a_ a.6.1.3 (A:) Transcrip 20.3 36 0.0026 22.4 3.0 28 51-89 1-28 (127)
274 d1hlva1 a.4.1.7 (A:1-66) DNA-b 20.1 36 0.0026 20.1 2.6 36 33-79 11-47 (66)
No 1
>d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.95 E-value=7.3e-28 Score=200.22 Aligned_cols=130 Identities=55% Similarity=0.988 Sum_probs=121.8
Q ss_pred CCCHHHHHHHhcChhhhhhccchHHHHhcCCchhhhhhCCCchhhccCCchHHHHHHHHHHhcchhhHHHHHhhcCCCCC
Q 041256 114 GASLSPYMALCLDKVCLDGWFGLKKQLLEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEH 193 (244)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~~~~~~~~~~~~~~~~~~ 193 (244)
+.|+++++.+..++.+++.|.+|.+++|+|+++|+.++|.++|+|+.++|+..+.|+++|...+....+.+++.|+.+++
T Consensus 2 ~~s~~~~~~~~~~~~~~~~W~~L~~avrtG~~~f~~~~G~~~~~~~~~~p~~~~~F~~aM~~~~~~~~~~~~~~~~~~~~ 81 (243)
T d1kyza2 2 GVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEG 81 (243)
T ss_dssp SCCTHHHHHHHTSHHHHGGGGGHHHHHHHCSCHHHHHHSSCHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSS
T ss_pred CCcHHHHHHHhcCHHHHHHHHHHHHHHhhCCCHHHhhcCCCHHHHHHhCHHHHHHHHHHHhHhhhhHHHHHHHhcccccC
Confidence 35899999998898899999999999999999999999999999999999999999999999988888899999984466
Q ss_pred cceEEEecCCccHHHHHHHHHCCCCeEEEccchHHhhhCCCCCCceeecc
Q 041256 194 VKKLVDVGGGLGITLNMIISKYPHIKGINYDLPYVIKDAPSYPGTLFIKF 243 (244)
Q Consensus 194 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~~~~i~~~~~ 243 (244)
.++|||||||+|.++++++++||+++++++|+|+|++.+++.+++++++|
T Consensus 82 ~~~vvDvGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~~~~~~r~~~~~~ 131 (243)
T d1kyza2 82 LKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGG 131 (243)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEECTTTTTTCCCCTTEEEEEC
T ss_pred CcEEEEecCCCcHHHHHHHHHCCCCeEEEcccHHhhhhcccCCceEEecc
Confidence 89999999999999999999999999999999999999999899998876
No 2
>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.94 E-value=2.2e-27 Score=197.22 Aligned_cols=128 Identities=38% Similarity=0.732 Sum_probs=109.0
Q ss_pred CHHHHHHHhcChhhhhhccchHHHHhcCC-chhhhhhCCCchhhccCCchHHHHHHHHHHhcchhhHHHHHhhcCCCCCc
Q 041256 116 SLSPYMALCLDKVCLDGWFGLKKQLLEGG-IAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHV 194 (244)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~~~~~~~~~~~~~~~~~~~ 194 (244)
|+++++.++++|.+++.|.+|.+++++|. ++|+.++|.++|||+.+||+..+.|+++|.+.+....+.+++.|+.|++.
T Consensus 3 ~l~~~~~~~~~p~~~~~w~~l~~~v~~g~~~~f~~~~G~~~~e~l~~~p~~~~~F~~aM~~~s~~~~~~l~~~~~~f~~~ 82 (244)
T d1fp1d2 3 YLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGI 82 (244)
T ss_dssp CCTHHHHHHTCHHHHHHHTTHHHHHHSCC--------------CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTC
T ss_pred cHHHHHHHHhCHHHHHHHHHHHHHHhcCCCCHhHHhcCCCHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence 78999999999999999999999999865 67999999999999999999999999999999998889999999878999
Q ss_pred ceEEEecCCccHHHHHHHHHCCCCeEEEccchHHhhhCCCCCCceeecc
Q 041256 195 KKLVDVGGGLGITLNMIISKYPHIKGINYDLPYVIKDAPSYPGTLFIKF 243 (244)
Q Consensus 195 ~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~~~~i~~~~~ 243 (244)
++|||||||+|.++++++++||++++|++|+|+|++.+...++|+++++
T Consensus 83 ~~vlDiGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~~~~~~ri~~~~g 131 (244)
T d1fp1d2 83 STLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGG 131 (244)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEEC
T ss_pred cEEEEecCCCcHHHHHHHHHCCCCeEEEecchhhhhccCCCCCeEEecC
Confidence 9999999999999999999999999999999999999988899999875
No 3
>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.92 E-value=2e-25 Score=185.40 Aligned_cols=127 Identities=26% Similarity=0.508 Sum_probs=116.0
Q ss_pred CHHHHHHHhcChhhhhhccchHHHHhcCC-chhhhhhCCCchhhccCCchHHHHHHHHHHhcchhhHHHHHhh-cCCCCC
Q 041256 116 SLSPYMALCLDKVCLDGWFGLKKQLLEGG-IAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLES-YKGFEH 193 (244)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~~~~~~~~~~~~-~~~~~~ 193 (244)
++.+++.++.+|.++..|.+|.++++++. ++|+.++|+++|+|+.+||++.+.|+++|...+......+.+. ++ |++
T Consensus 2 s~ap~~~~~~~p~~~~~w~~l~~~~~~~~~~~f~~a~G~~~~e~l~~~pe~~~~F~~aM~~~s~~~~~~~~~~~~~-~~~ 80 (244)
T d1fp2a2 2 CLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFV-FDG 80 (244)
T ss_dssp CCHHHHHHHTCHHHHHGGGGHHHHHTCSSCCHHHHHHSSCHHHHHHHCHHHHHHHHHHHHHTHHHHHHHHHTCHHH-HTT
T ss_pred ChHHHHHHHhCHHHHHHHHHHHHHHhcCCCCHHHHhhCCCHHHHHHhCHHHHHHHHHHhhhhhhhhhhhHhhhccc-ccC
Confidence 57889999889999999999999999874 6899999999999999999999999999999888766666653 35 788
Q ss_pred cceEEEecCCccHHHHHHHHHCCCCeEEEccchHHhhhCCCCCCceeecc
Q 041256 194 VKKLVDVGGGLGITLNMIISKYPHIKGINYDLPYVIKDAPSYPGTLFIKF 243 (244)
Q Consensus 194 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~~~~i~~~~~ 243 (244)
.++|||||||+|.++++++++||++++++||||+|++.+...++|++++|
T Consensus 81 ~~~vvDvGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~~~~~~rv~~~~g 130 (244)
T d1fp2a2 81 LESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGG 130 (244)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEEC
T ss_pred ceEEEEecCCccHHHHHHHHhCCCCeEEEecCHHHHHhCcccCceEEEec
Confidence 99999999999999999999999999999999999999998889999876
No 4
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=99.87 E-value=8e-23 Score=170.73 Aligned_cols=128 Identities=22% Similarity=0.309 Sum_probs=113.0
Q ss_pred CCCHHHHHHHhcChhhh-hhccchHHHHhcCCchhhhhhCCCchhhccCCchHHHHHHHHHHhcchhhHHHHHhhcCCCC
Q 041256 114 GASLSPYMALCLDKVCL-DGWFGLKKQLLEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFE 192 (244)
Q Consensus 114 ~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~g~~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~~~~~~~~~~~~~~~~~ 192 (244)
|.++++++.+....... .+|.+|.+++|+|.++|+..+|.++|+|+.++|+..+.|+++|...+....+.+++.+| |+
T Consensus 2 p~~~~~~~~l~~~~~~~~~~~~~L~~~~rtG~~~~~~~~G~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~d-~~ 80 (256)
T d1qzza2 2 PAQQRAWLDLNGAVSHADLAFTGLLDVVRTGRPAYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD-WS 80 (256)
T ss_dssp TTCHHHHHCTTSHHHHHHGGGGGHHHHHHHSCCSHHHHHSSCHHHHHHHCHHHHHHHHHTCGGGSTTTTHHHHHTSC-CT
T ss_pred cHHHHHHHhhcCchhhhHhhHHHHHHHHHhCCchhhhhhCCCHHHHHHhCHHHHHHHHHHHHhhHHHHHHHHHhcCC-Cc
Confidence 45788888766333333 37999999999999999999999999999999999999999999999888899999999 99
Q ss_pred CcceEEEecCCccHHHHHHHHHCCCCeEEEccchHHhhhCCC-------CCCceeec
Q 041256 193 HVKKLVDVGGGLGITLNMIISKYPHIKGINYDLPYVIKDAPS-------YPGTLFIK 242 (244)
Q Consensus 193 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~-------~~~i~~~~ 242 (244)
+.++|||||||+|.++.+++++||+++++++|+|++++.+++ .++|+++.
T Consensus 81 ~~~~vlDvG~G~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~~~~~~~~ri~~~~ 137 (256)
T d1qzza2 81 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAE 137 (256)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred cCCEEEEECCCCCHHHHHHHHhhcCcEEEEecChHHHHHHHHHHhhcCCcceeeeee
Confidence 999999999999999999999999999999999999988763 24566654
No 5
>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=99.83 E-value=2.5e-21 Score=161.10 Aligned_cols=112 Identities=17% Similarity=0.310 Sum_probs=103.2
Q ss_pred hhhccchHHHHhcCCchhhhhhCCCchhhccCCchHHHHHHHHHHhcchhhHHHHHhhcCCCCCcceEEEecCCccHHHH
Q 041256 130 LDGWFGLKKQLLEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLGITLN 209 (244)
Q Consensus 130 ~~~~~~l~~~l~~g~~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~~~~~~~~~~~~~~~~~~~~~vvDVGGG~G~~~~ 209 (244)
..+|.+|++++|+|+++|+.++|+++|+|+.++|+..+.|+.+|...+....+.+++.|| |++.++|||||||+|.++.
T Consensus 18 ~~~~~~L~~~vr~G~~~~~~~~G~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~d-~~~~~~VLDvGcG~G~~~~ 96 (253)
T d1tw3a2 18 DISFTRLPDAIRTGRPTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYD-WTNVRHVLDVGGGKGGFAA 96 (253)
T ss_dssp GGGGGGHHHHHHHCCCCHHHHHSSCHHHHHHTCHHHHHHHHHHHTTTTTTTTHHHHHHSC-CTTCSEEEEETCTTSHHHH
T ss_pred cccHHHHHHHHHhCCchhhhccCCCHHHHHhhCHHHHHHHHHHHHHhHHHHHHHHHhhcC-CccCCEEEEeCCCCCHHHH
Confidence 348999999999999999999999999999999999999999999998888889999999 9999999999999999999
Q ss_pred HHHHHCCCCeEEEccchHHhhhCCC-------CCCceeec
Q 041256 210 MIISKYPHIKGINYDLPYVIKDAPS-------YPGTLFIK 242 (244)
Q Consensus 210 ~l~~~~P~l~~~v~Dlp~vi~~a~~-------~~~i~~~~ 242 (244)
.+++++|+++++++|+|++++.+++ .++|+++.
T Consensus 97 ~la~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~rv~~~~ 136 (253)
T d1tw3a2 97 AIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVE 136 (253)
T ss_dssp HHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHHhcceeEEEEccCHHHHHHHHHHHHHhhcccchhhcc
Confidence 9999999999999999999988764 24677664
No 6
>d1fp2a1 a.4.5.29 (A:8-108) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.82 E-value=5.6e-21 Score=136.68 Aligned_cols=97 Identities=18% Similarity=0.260 Sum_probs=84.9
Q ss_pred hhhchhHHHHHHHHhhhHHHHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcc
Q 041256 8 EEETNNFSYAMELASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNAL 87 (244)
Q Consensus 8 ~~~~~~~~~l~~~~~g~~~~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll 87 (244)
.|..+++..+|++++||+.+++|++|++|||||+|++.+ ||+|++|||++++++ +.+++. +.|+||+|++.|+|
T Consensus 4 ~e~~qaq~~l~~~~~gf~~s~aL~~aveLgi~d~l~~~~--~p~t~~eLa~~~~~~---~~~~~~-L~RlLR~L~~~gi~ 77 (101)
T d1fp2a1 4 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHG--KPISLSNLVSILQVP---SSKIGN-VRRLMRYLAHNGFF 77 (101)
T ss_dssp THHHHHHHHHHHHHTTHHHHHHHHHHHHTTHHHHHHHHT--SCEEHHHHHHHHTCC---GGGHHH-HHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHHHHcC--CCCCHHHHHHHcCCC---CccchH-HHHHHHHHHhCCce
Confidence 466789999999999999999999999999999998765 799999999999996 433567 99999999999999
Q ss_pred cceeecCCceeecCccccccccCC
Q 041256 88 HCSFVDGQRLYSLAPVSAYFVRNN 111 (244)
Q Consensus 88 ~~~~~~~~~~y~~t~~s~~l~~~~ 111 (244)
.++. .++++|++|+.|++|++++
T Consensus 78 ~~~~-~~~~~Y~lt~~s~~Lv~~~ 100 (101)
T d1fp2a1 78 EIIT-KEEESYALTVASELLVRGS 100 (101)
T ss_dssp EEEE-SSSEEEEECHHHHTTSTTS
T ss_pred eeec-CCCCeEecCHHHHHhhcCC
Confidence 8542 3457999999999998875
No 7
>d1tw3a1 a.4.5.29 (A:14-98) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=99.73 E-value=3.7e-18 Score=118.29 Aligned_cols=83 Identities=17% Similarity=0.246 Sum_probs=73.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeec
Q 041256 14 FSYAMELASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVD 93 (244)
Q Consensus 14 ~~~l~~~~~g~~~~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~ 93 (244)
..+ +..+.+++.+++|++|+++||||+|.+ ||+|++|||+++|++ ++. +.|+||+|++.|+|++ +
T Consensus 3 ~~~-l~~l~~~~~~~aL~~av~L~ifd~l~~----gp~s~~eLA~~~g~~------~~~-l~rlLr~l~a~gl~~e---~ 67 (85)
T d1tw3a1 3 LRT-LIRLGSLHTPMVVRTAATLRLVDHILA----GARTVKALAARTDTR------PEA-LLRLIRHLVAIGLLEE---D 67 (85)
T ss_dssp HHH-HHHHHCSHHHHHHHHHHHTTHHHHHHT----TCCBHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEE---E
T ss_pred HHH-HHHHHchHHHHHHHHHHHcCcHHHhcc----CCCCHHHHHHHhCcC------hhH-HHHHHHHHHHCCCeEe---c
Confidence 344 444579999999999999999999976 799999999999997 678 9999999999999984 4
Q ss_pred CCceeecCccccccccCC
Q 041256 94 GQRLYSLAPVSAYFVRNN 111 (244)
Q Consensus 94 ~~~~y~~t~~s~~l~~~~ 111 (244)
+++.|++|+.|+.|.+|+
T Consensus 68 ~~~~y~lt~~s~~L~~Dh 85 (85)
T d1tw3a1 68 APGEFVPTEVGELLADDH 85 (85)
T ss_dssp ETTEEEECTTGGGGSTTS
T ss_pred CCCeEecCHHHHHhhcCC
Confidence 579999999999998774
No 8
>d1kyza1 a.4.5.29 (A:13-119) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.72 E-value=8.2e-18 Score=120.45 Aligned_cols=100 Identities=50% Similarity=0.828 Sum_probs=84.2
Q ss_pred hhchhHHHHHHHHhhhHHHHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccc
Q 041256 9 EETNNFSYAMELASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALH 88 (244)
Q Consensus 9 ~~~~~~~~l~~~~~g~~~~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~ 88 (244)
+++++....++++++++.+++|++|++|||||+|++.|.++++|..|||.++..+ ||+++.. |.|+||+|++.|+|.
T Consensus 3 ~dee~~l~a~~L~~~~v~pmaLk~AieLgI~DiI~~~G~~~~ls~~eia~~l~~~--~p~~~~~-L~RilR~Las~~vf~ 79 (107)
T d1kyza1 3 SDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTT--NPDAPVM-LDRMLRLLACYIILT 79 (107)
T ss_dssp CHHHHHHHHHHHHTTTHHHHHHHHHHHTTHHHHHHTTCTTCCBCHHHHHHTSSCC--CTTHHHH-HHHHHHHHHHTTSEE
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHcCCHHHHHHcCCCCCCCHHHHHHhcCCC--CCcchHH-HHHHHHHHHhcCceE
Confidence 3456667788999999999999999999999999998766789999999999987 6665678 999999999999997
Q ss_pred ceeecC-C----ceeecCccccccccCC
Q 041256 89 CSFVDG-Q----RLYSLAPVSAYFVRNN 111 (244)
Q Consensus 89 ~~~~~~-~----~~y~~t~~s~~l~~~~ 111 (244)
+..+.. + .+|.+||.|++|+++.
T Consensus 80 ~~~~~~~dg~~~~~Y~LTpvsk~Lv~de 107 (107)
T d1kyza1 80 CSVRTQQDGKVQRLYGLATVAKYLVKNE 107 (107)
T ss_dssp EEEEECTTSCEEEEEEECHHHHHHSCCT
T ss_pred EeeecCCCCCeeeEEecchhHHhhcCCC
Confidence 542221 2 2699999999999873
No 9
>d1fp1d1 a.4.5.29 (D:19-128) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.72 E-value=1.2e-17 Score=119.89 Aligned_cols=103 Identities=37% Similarity=0.600 Sum_probs=85.3
Q ss_pred hhhchhHHHHHHHHhhhHHHHHHHHHHhcChhhHHhhcC-CCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCc
Q 041256 8 EEETNNFSYAMELASAIVLPAVMQAVVELDVFEIISKAG-PGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNA 86 (244)
Q Consensus 8 ~~~~~~~~~l~~~~~g~~~~~~L~~a~~lgifd~L~~~~-~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gl 86 (244)
++++++....++++++++.+++|++|++|||||+|+..| +++++|+.|||.++..++.||..+.. |.|+||+|++.|+
T Consensus 1 ~~~~~~~l~a~~L~~~~v~pMaLk~AieLgI~diI~~~G~~~~~ls~~ela~~lp~~~~~p~~~~~-L~RiLRlLas~~v 79 (110)
T d1fp1d1 1 QTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNR-LDRMLRLLASYSV 79 (110)
T ss_dssp CCHHHHHHHHHHHHHTTHHHHHHHHHHHTTHHHHHHTCSSTTCCBCHHHHHTTSCGGGCCTTHHHH-HHHHHHHHHHTTS
T ss_pred CchHHHHHHHHHHHHhhHHHHHHHHHHHcCCHHHHHHcCCCCCCCCHHHHHHhCCCCCCCccHHHH-HHHHHHHHHHcCc
Confidence 467788899999999999999999999999999999876 23568999999998864345655668 9999999999999
Q ss_pred ccceeecC-Cc----eeecCccccccccCC
Q 041256 87 LHCSFVDG-QR----LYSLAPVSAYFVRNN 111 (244)
Q Consensus 87 l~~~~~~~-~~----~y~~t~~s~~l~~~~ 111 (244)
|.+..+.+ +| +|.+||.|++|++++
T Consensus 80 f~~~~~~~~~g~~e~~Y~Ltpvsk~Lv~de 109 (110)
T d1fp1d1 80 LTSTTRTIEDGGAERVYGLSMVGKYLVPDE 109 (110)
T ss_dssp EEEEEEECTTSCEEEEEEECTTGGGGSTTC
T ss_pred cccccccCCCCCeeeEEecchhhHhhcCCC
Confidence 97543222 22 599999999999875
No 10
>d1qzza1 a.4.5.29 (A:10-101) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=99.70 E-value=1.2e-17 Score=117.17 Aligned_cols=88 Identities=11% Similarity=0.178 Sum_probs=77.6
Q ss_pred hchhHHHHHHHHhhhHHHHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 10 ETNNFSYAMELASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 10 ~~~~~~~l~~~~~g~~~~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
.++....+++++.+++.+++|++|+++||||+|.+ ||+|++|||+++|++ ++. +.|+||+|+++|+|++
T Consensus 4 ~d~~~d~ll~~~~~~~~~~~L~~aveL~ifd~L~~----gp~t~~eLA~~~g~~------~~~-l~rLlr~L~a~gll~~ 72 (92)
T d1qzza1 4 TDQDLDVLLKNLGNLVTPMALRVAATLRLVDHLLA----GADTLAGLADRTDTH------PQA-LSRLVRHLTVVGVLEG 72 (92)
T ss_dssp CHHHHHHHHHTTTCCHHHHHHHHHHHTTHHHHHHT----TCCSHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEC
T ss_pred cchhHHHHHHHHHchHHHHHHHHHHHcCchHHHhC----CCCCHHHHHHHHCcC------chH-HHHHHHHHHHCCCeee
Confidence 34678899999999999999999999999999986 799999999999997 678 9999999999999996
Q ss_pred eeecCCceeecCcccccccc
Q 041256 90 SFVDGQRLYSLAPVSAYFVR 109 (244)
Q Consensus 90 ~~~~~~~~y~~t~~s~~l~~ 109 (244)
+. .+.+.|++|+.+..|++
T Consensus 73 ~~-d~~~~~~~t~~g~lL~d 91 (92)
T d1qzza1 73 GE-KQGRPLRPTRLGMLLAD 91 (92)
T ss_dssp CC-C-CCCCEECTTGGGGST
T ss_pred ec-CCCceecccHHHHhccC
Confidence 42 23467999999998875
No 11
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.98 E-value=4.4e-06 Score=54.93 Aligned_cols=57 Identities=14% Similarity=0.198 Sum_probs=47.5
Q ss_pred cChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeecCccc
Q 041256 36 LDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSLAPVS 104 (244)
Q Consensus 36 lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~t~~s 104 (244)
+.|.+.+.+.+ +|+|+.|||+.+|++ ..- +.|+|..|+..|++++ +.+++|++++..
T Consensus 8 l~IL~~~a~~~--~~~s~~eia~~~~~~------~st-~~rll~tL~~~g~l~~---~~~g~y~lG~~l 64 (75)
T d1mkma1 8 FEILDFIVKNP--GDVSVSEIAEKFNMS------VSN-AYKYMVVLEEKGFVLR---KKDKRYVPGYKL 64 (75)
T ss_dssp HHHHHHHHHCS--SCBCHHHHHHHTTCC------HHH-HHHHHHHHHHTTSEEE---CTTSCEEECTHH
T ss_pred HHHHHHHHhCC--CCCCHHHHHHHHCcC------HHH-HHHHHHHHHHCCCEEE---CCCCCEeecHHH
Confidence 45788888865 689999999999996 445 9999999999999996 346889998753
No 12
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}
Probab=97.91 E-value=3.7e-06 Score=68.95 Aligned_cols=65 Identities=14% Similarity=0.207 Sum_probs=47.9
Q ss_pred HHHHHHHhcchhhHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 168 VFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 168 ~f~~aM~~~~~~~~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.+..++..........+....+ +++..+|||||||.|.++..+++++ +.+++.+|+ |..++.|++
T Consensus 43 ~~~~a~~~~~~~~~~~l~~~~~-l~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~i~~a~~ 108 (282)
T d2o57a1 43 EIREASLRTDEWLASELAMTGV-LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEE 108 (282)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhcC-CCCCCEEEEeCCCCcHHHhhhhccC-CcEEEEEeccchhhhhhhc
Confidence 3444444444444455666666 7888999999999999999999876 678999998 777776654
No 13
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}
Probab=97.75 E-value=1.1e-05 Score=65.83 Aligned_cols=50 Identities=26% Similarity=0.484 Sum_probs=42.9
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC-CCCceee
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS-YPGTLFI 241 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~-~~~i~~~ 241 (244)
.+..+|||||||+|.++..+++++|+.+++.+|+ |..++.|++ .++|+++
T Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~ 134 (268)
T d1p91a_ 83 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFC 134 (268)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccce
Confidence 5668999999999999999999999999999998 778887765 5666653
No 14
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}
Probab=97.74 E-value=1.8e-05 Score=63.25 Aligned_cols=51 Identities=18% Similarity=0.273 Sum_probs=42.1
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 182 EKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 182 ~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
..+.+.+. +....+|||||||.|.++..++++++ .+++.+|+ |..++.+++
T Consensus 23 ~~l~~~~~-l~pg~~VLDiGCG~G~~~~~la~~~~-~~v~GvD~s~~~~~~ar~ 74 (245)
T d1nkva_ 23 ATLGRVLR-MKPGTRILDLGSGSGEMLCTWARDHG-ITGTGIDMSSLFTAQAKR 74 (245)
T ss_dssp HHHHHHTC-CCTTCEEEEETCTTCHHHHHHHHHTC-CEEEEEESCHHHHHHHHH
T ss_pred HHHHHHcC-CCCCCEEEEEcCCCCHHHHHHHHhcC-CEEEEEecccchhhHHHH
Confidence 35566666 77789999999999999999998876 79999999 777776654
No 15
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}
Probab=97.66 E-value=2.9e-05 Score=61.21 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=37.8
Q ss_pred CCcceEEEecCCccHHHHHHHHH--CCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISK--YPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~--~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
....+|||||||+|..+..+++. +|+.+++.+|+ |..++.|++
T Consensus 38 ~~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~ 83 (225)
T d1im8a_ 38 TADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQ 83 (225)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHH
T ss_pred CCCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHH
Confidence 45579999999999999999986 58999999999 888888864
No 16
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}
Probab=97.66 E-value=2.1e-05 Score=61.68 Aligned_cols=39 Identities=28% Similarity=0.359 Sum_probs=34.4
Q ss_pred cceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhC
Q 041256 194 VKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDA 232 (244)
Q Consensus 194 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 232 (244)
...|||||||.|.++..+++++|+...+.+|+ +..+..+
T Consensus 30 ~PlvLeIGcG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a 69 (204)
T d2fcaa1 30 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTA 69 (204)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHH
T ss_pred CceEEEEEecCcHHHHHHHHhCCCCcEEEeecchHHHHHH
Confidence 46899999999999999999999999999997 6666554
No 17
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.66 E-value=2.1e-05 Score=61.61 Aligned_cols=49 Identities=24% Similarity=0.341 Sum_probs=39.4
Q ss_pred CcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC------CCCceee
Q 041256 193 HVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS------YPGTLFI 241 (244)
Q Consensus 193 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~------~~~i~~~ 241 (244)
....+||||||.|.++..+++.+|+...+.+|. +..+..+.+ +++|.++
T Consensus 31 ~~plvLdIGcG~G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~ 86 (204)
T d1yzha1 31 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLL 86 (204)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceee
Confidence 346899999999999999999999999999997 665655532 4566654
No 18
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}
Probab=97.59 E-value=2.8e-05 Score=61.18 Aligned_cols=57 Identities=19% Similarity=0.272 Sum_probs=43.9
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC------CCCceee
Q 041256 182 EKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS------YPGTLFI 241 (244)
Q Consensus 182 ~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~------~~~i~~~ 241 (244)
..+++..+ +.+..+|+|||||.|.++..++++.+ +++.+|+ |..++.|++ .++|+++
T Consensus 5 ~~ll~~~~-l~~~~rVLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~ 68 (231)
T d1vl5a_ 5 AKLMQIAA-LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYV 68 (231)
T ss_dssp HHHHHHHT-CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHhcC-CCCcCEEEEecccCcHHHHHHHHhCC--EEEEEECCHHHHhhhhhccccccccccccc
Confidence 35666666 78889999999999999999999876 5677888 777776643 3566654
No 19
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}
Probab=97.45 E-value=4.3e-05 Score=60.47 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=40.1
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
-+++..+ ++...+|||||||+|.++..++++.+ +++.+|+ +..++.|++
T Consensus 7 ~l~~~~~-~~~~~rILDiGcGtG~~~~~la~~~~--~v~gvD~S~~~l~~A~~ 56 (234)
T d1xxla_ 7 LMIKTAE-CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASS 56 (234)
T ss_dssp HHHHHHT-CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHH
T ss_pred HHHHHhC-CCCCCEEEEeCCcCcHHHHHHHHhCC--eEEEEeCChhhhhhhhh
Confidence 3567777 88889999999999999999999875 5788998 666666653
No 20
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.44 E-value=5.7e-05 Score=59.23 Aligned_cols=53 Identities=8% Similarity=0.043 Sum_probs=44.4
Q ss_pred cCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC----CCCceee
Q 041256 188 YKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS----YPGTLFI 241 (244)
Q Consensus 188 ~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~----~~~i~~~ 241 (244)
++ ++...+|||||||+|..+..+++..|+-+++.+|. |..++.+++ +++++++
T Consensus 52 l~-lkpg~~VLDlGcG~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i 109 (209)
T d1nt2a_ 52 LK-LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPL 109 (209)
T ss_dssp CC-CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEE
T ss_pred CC-CCCCCEEEEeCCcCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEE
Confidence 45 67789999999999999999999999999999999 888887753 4555554
No 21
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}
Probab=97.40 E-value=9e-05 Score=60.50 Aligned_cols=43 Identities=26% Similarity=0.339 Sum_probs=39.3
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
....+|+|+|||+|..++.+++++|+.+++..|. |..++.|++
T Consensus 107 ~~~~~vlDlGtGSG~I~i~la~~~p~~~v~avDis~~Al~~A~~ 150 (274)
T d2b3ta1 107 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQR 150 (274)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHH
T ss_pred ccccceeeeehhhhHHHHHHHhhCCcceeeeccchhHHHhHHHH
Confidence 4557899999999999999999999999999999 889988875
No 22
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.39 E-value=4.9e-05 Score=60.53 Aligned_cols=54 Identities=11% Similarity=0.129 Sum_probs=43.7
Q ss_pred hcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCC----CCCCceee
Q 041256 187 SYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAP----SYPGTLFI 241 (244)
Q Consensus 187 ~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~----~~~~i~~~ 241 (244)
.++ +....+|+|||||+|..+..+++..|+-+++.+|+ |..++.++ +++++.++
T Consensus 69 ~l~-ikpG~~VLDlGcGsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i 127 (230)
T d1g8sa_ 69 VMP-IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPI 127 (230)
T ss_dssp CCC-CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEE
T ss_pred hCC-CCCCCEEEEeCEEcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceE
Confidence 344 67779999999999999999999999999999998 76666554 35666554
No 23
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=97.33 E-value=8.1e-05 Score=56.99 Aligned_cols=48 Identities=19% Similarity=0.138 Sum_probs=39.1
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 184 VLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 184 ~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
++.... ..+..+|+|||||+|.+++.+++..+ +++.+|. |..++.|++
T Consensus 25 il~~l~-~~~g~~VLDiGcGsG~~s~~lA~~~~--~V~avD~~~~~l~~a~~ 73 (186)
T d1l3ia_ 25 IMCLAE-PGKNDVAVDVGCGTGGVTLELAGRVR--RVYAIDRNPEAISTTEM 73 (186)
T ss_dssp HHHHHC-CCTTCEEEEESCTTSHHHHHHHTTSS--EEEEEESCHHHHHHHHH
T ss_pred HHHhcC-CCCCCEEEEEECCeEcccccccccce--EEEEecCCHHHHHHHHH
Confidence 344455 56778999999999999999988765 6788898 888888875
No 24
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.31 E-value=0.00012 Score=56.52 Aligned_cols=53 Identities=26% Similarity=0.293 Sum_probs=45.9
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 181 MEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 181 ~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
...+++.+. .....++||+++|.|.++..+++++|+.+.+.+|+ |+.++.+++
T Consensus 12 l~evi~~l~-~~~~~~~lD~t~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~ 65 (192)
T d1m6ya2 12 VREVIEFLK-PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEE 65 (192)
T ss_dssp HHHHHHHHC-CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhhC-CCCCCEEEEecCCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHH
Confidence 356677666 56668999999999999999999999999999999 899988864
No 25
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}
Probab=97.29 E-value=8.4e-05 Score=56.41 Aligned_cols=47 Identities=6% Similarity=0.001 Sum_probs=38.6
Q ss_pred HhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 185 LESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 185 ~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
...+. ..+..+|||||||.|..+..|+++ +.+++.+|+ +..++.|++
T Consensus 13 ~~~l~-~~~~~rvLd~GCG~G~~a~~la~~--G~~V~gvD~S~~~i~~a~~ 60 (201)
T d1pjza_ 13 WSSLN-VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFT 60 (201)
T ss_dssp HHHHC-CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHH
T ss_pred HHHcC-CCCCCEEEEecCcCCHHHHHHHHc--CCceEeecccHHHHHHHHH
Confidence 33344 567789999999999999999987 688999998 778877764
No 26
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.28 E-value=4.7e-05 Score=60.36 Aligned_cols=42 Identities=12% Similarity=0.111 Sum_probs=34.9
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
....+|||||||.|..+..++++.|. +.+++|+ |.+++.|++
T Consensus 52 ~~g~~VLdIGcG~G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~ 94 (229)
T d1zx0a1 52 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRD 94 (229)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEE-EEEEEECCHHHHHHHHH
T ss_pred cCCCeEEEeeccchHHHHHHHHcCCC-eEEEeCCCHHHHHHHHH
Confidence 34578999999999999999987664 6888898 888888764
No 27
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=97.16 E-value=0.00016 Score=57.31 Aligned_cols=49 Identities=16% Similarity=0.269 Sum_probs=39.3
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.++..+. ..+.++|||||||+|.++..++++.. +++.+|+ |..++.|++
T Consensus 32 ~~~~~~~-~~~~~~iLDiGcGtG~~~~~l~~~~~--~v~gvD~s~~mi~~a~~ 81 (251)
T d1wzna1 32 EIFKEDA-KREVRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARR 81 (251)
T ss_dssp HHHHHTC-SSCCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHH
T ss_pred HHHHHhc-CCCCCEEEEeCCCCCccchhhcccce--EEEEEeecccccccccc
Confidence 4455555 56778999999999999999999764 6888898 778888764
No 28
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}
Probab=97.12 E-value=0.00015 Score=59.12 Aligned_cols=52 Identities=17% Similarity=0.209 Sum_probs=41.3
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCC-CeEEEccc-hHHhhhCCC
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPH-IKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~-l~~~v~Dl-p~vi~~a~~ 234 (244)
.+++....+.++.+|||||||.|.++..+++.+|. .+.+.+|+ |..++.|++
T Consensus 17 ~l~~~~~~~~~~~~ILDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~ 70 (281)
T d2gh1a1 17 FLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARE 70 (281)
T ss_dssp HHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHH
T ss_pred HHHHHHhccCCcCEEEEecCcCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhc
Confidence 34443322677899999999999999999999985 78999998 777877764
No 29
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.12 E-value=0.00019 Score=61.66 Aligned_cols=51 Identities=10% Similarity=0.151 Sum_probs=43.2
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCC
Q 041256 182 EKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 182 ~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 233 (244)
..+++..+ +....+|||||||.|..+..+++++|.-+++.+|+ |..++.|+
T Consensus 206 ~~Il~~l~-Lkpgd~fLDLGCG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak 257 (406)
T d1u2za_ 206 SDVYQQCQ-LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTI 257 (406)
T ss_dssp HHHHHHTT-CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHH
T ss_pred HHHHHHhC-CCCCCEEEeCCCCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 45666666 77778999999999999999999999889999998 66666664
No 30
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}
Probab=97.11 E-value=0.00014 Score=58.56 Aligned_cols=51 Identities=14% Similarity=0.205 Sum_probs=41.1
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 182 EKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 182 ~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
..+++.++ ..+..++||||||.|.++..+++++++ +++.+|. +..++.|++
T Consensus 83 ~~fl~~l~-~~~~~~vLD~GcG~G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~ 134 (254)
T d1xtpa_ 83 RNFIASLP-GHGTSRALDCGAGIGRITKNLLTKLYA-TTDLLEPVKHMLEEAKR 134 (254)
T ss_dssp HHHHHTST-TCCCSEEEEETCTTTHHHHHTHHHHCS-EEEEEESCHHHHHHHHH
T ss_pred HHHHhhCC-CCCCCeEEEecccCChhhHHHHhhcCc-eEEEEcCCHHHHHhhhc
Confidence 34566666 567789999999999999999988776 6778887 778888764
No 31
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.00 E-value=0.00018 Score=55.26 Aligned_cols=49 Identities=18% Similarity=0.233 Sum_probs=38.7
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
-+++.++ ..+..+|+|||||+|.++..+++.+|+ +++.|+ |..++.+++
T Consensus 43 lLi~~l~-~~~~~~VLDiGcG~G~~~~~la~~~~~--v~~iD~s~~~i~~a~~ 92 (194)
T d1dusa_ 43 ILVENVV-VDKDDDILDLGCGYGVIGIALADEVKS--TTMADINRRAIKLAKE 92 (194)
T ss_dssp HHHHHCC-CCTTCEEEEETCTTSHHHHHHGGGSSE--EEEEESCHHHHHHHHH
T ss_pred HHHHhCC-cCCCCeEEEEeecCChhHHHHHhhccc--cceeeeccccchhHHH
Confidence 3455666 566789999999999999999999886 555676 888887764
No 32
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}
Probab=96.99 E-value=0.0003 Score=53.96 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=36.7
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCC
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 233 (244)
.++.... +....+|||||||.|..+..++++.+ +++.+|+ +..++.++
T Consensus 21 ~~~~~~~-~~~~grvLDiGcG~G~~~~~la~~g~--~v~gvD~s~~~l~~a~ 69 (198)
T d2i6ga1 21 DVLAAAK-VVAPGRTLDLGCGNGRNSLYLAANGY--DVTAWDKNPASMANLE 69 (198)
T ss_dssp HHHHHHT-TSCSCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHH
T ss_pred HHHHHcc-cCCCCcEEEECCCCCHHHHHHHHHhh--hhccccCcHHHHHHHH
Confidence 3444444 55567999999999999999999864 6788898 66677654
No 33
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=96.96 E-value=0.00024 Score=55.02 Aligned_cols=49 Identities=22% Similarity=0.291 Sum_probs=37.4
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC-CCCceee
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS-YPGTLFI 241 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~-~~~i~~~ 241 (244)
++ .++|+|+|||+|.++++++...+. +++.+|. |..++.+++ .++++++
T Consensus 47 l~-Gk~VLDlGcGtG~l~i~a~~~ga~-~V~~vDid~~a~~~ar~N~~~~~~~ 97 (197)
T d1ne2a_ 47 IG-GRSVIDAGTGNGILACGSYLLGAE-SVTAFDIDPDAIETAKRNCGGVNFM 97 (197)
T ss_dssp SB-TSEEEEETCTTCHHHHHHHHTTBS-EEEEEESCHHHHHHHHHHCTTSEEE
T ss_pred CC-CCEEEEeCCCCcHHHHHHHHcCCC-cccccccCHHHHHHHHHccccccEE
Confidence 54 389999999999999888777665 6788887 888888775 3455543
No 34
>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.95 E-value=0.00014 Score=57.03 Aligned_cols=43 Identities=14% Similarity=0.125 Sum_probs=36.0
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
..+..+|||||||.|.++..++++++. +++.+|+ |..++.|++
T Consensus 58 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~ 101 (222)
T d2ex4a1 58 KTGTSCALDCGAGIGRITKRLLLPLFR-EVDMVDITEDFLVQAKT 101 (222)
T ss_dssp CCCCSEEEEETCTTTHHHHHTTTTTCS-EEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEeccCCCHhhHHHHHhcCC-EEEEeecCHHHhhcccc
Confidence 345689999999999999999888874 7888898 888887764
No 35
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}
Probab=96.92 E-value=0.00022 Score=56.01 Aligned_cols=49 Identities=16% Similarity=0.172 Sum_probs=37.7
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC--CCCceee
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS--YPGTLFI 241 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~--~~~i~~~ 241 (244)
+.+.++|||||||+|.++..++++.. +++.+|+ |..++.|++ ..+|+++
T Consensus 18 ~~~~~~VLDiGcG~G~~~~~l~~~g~--~v~giD~s~~~i~~a~~~~~~~~~~~ 69 (225)
T d2p7ia1 18 FFRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYI 69 (225)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEE
T ss_pred hCCCCcEEEEeCCCcHHHHHHHHcCC--eEEEEeCcHHHhhhhhcccccccccc
Confidence 34557899999999999999998865 5888898 778888764 2345543
No 36
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.90 E-value=0.00038 Score=53.88 Aligned_cols=48 Identities=19% Similarity=0.295 Sum_probs=36.4
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.++..+ +.+..+|||||||+|.++..+++. +.+++.+|+ +..++.|++
T Consensus 29 ~~~~~~--l~~~~~ILDiGcG~G~~~~~la~~--~~~v~giD~S~~~i~~ak~ 77 (226)
T d1ve3a1 29 PLLMKY--MKKRGKVLDLACGVGGFSFLLEDY--GFEVVGVDISEDMIRKARE 77 (226)
T ss_dssp HHHHHS--CCSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred HHHHHh--cCCCCEEEEECCCcchhhhhHhhh--hcccccccccccchhhhhh
Confidence 344443 344478999999999999999985 567888998 777877754
No 37
>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}
Probab=96.88 E-value=0.00025 Score=57.17 Aligned_cols=62 Identities=21% Similarity=0.322 Sum_probs=42.7
Q ss_pred HHHHHHHhcchhhHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 168 VFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 168 ~f~~aM~~~~~~~~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.|..+-..+++.....+ ..+. ....+|+|||||+|.+++++++. +.+++.+|. |..++.|++
T Consensus 98 aFGTG~H~TT~l~l~~l-~~~~--~~g~~VLDiGcGsG~l~i~aa~~--g~~V~gvDis~~av~~A~~ 160 (254)
T d2nxca1 98 AFGTGHHETTRLALKAL-ARHL--RPGDKVLDLGTGSGVLAIAAEKL--GGKALGVDIDPMVLPQAEA 160 (254)
T ss_dssp ----CCSHHHHHHHHHH-HHHC--CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCGGGHHHHHH
T ss_pred ccCccccchhhHHHHHH-Hhhc--CccCEEEEcccchhHHHHHHHhc--CCEEEEEECChHHHHHHHH
Confidence 56666666665555443 3333 34589999999999999988775 457889998 888888874
No 38
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.88 E-value=0.00055 Score=57.03 Aligned_cols=51 Identities=16% Similarity=0.211 Sum_probs=42.9
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCC
Q 041256 182 EKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 182 ~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 233 (244)
..+++.+. ..+..+|+|||||.|.++..+++.+|..+++.+|+ |..++.|+
T Consensus 141 ~~~~~~~~-l~~~~~vlD~GcG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~ 192 (328)
T d1nw3a_ 141 AQMIDEIK-MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAE 192 (328)
T ss_dssp HHHHHHSC-CCTTCEEEEETCTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHH
T ss_pred HHHHHHcC-CCCCCEEEEcCCCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 45666676 77778999999999999999999999999999998 66666553
No 39
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.84 E-value=0.00036 Score=56.94 Aligned_cols=50 Identities=18% Similarity=0.331 Sum_probs=40.5
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCC
Q 041256 182 EKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 182 ~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 233 (244)
..+++.+. ++...+|||||||.|.++..++++++ .+++.+|+ ++-++.|+
T Consensus 42 ~~~~~~l~-l~~g~~VLDiGCG~G~~a~~~a~~~g-~~v~gi~ls~~q~~~a~ 92 (280)
T d2fk8a1 42 DLNLDKLD-LKPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCE 92 (280)
T ss_dssp HHHHTTSC-CCTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHH
T ss_pred HHHHHHcC-CCCCCEEEEecCCchHHHHHHHHhCc-eeEEEecchHHHHHHHH
Confidence 46777777 78889999999999999999888886 58999988 55555554
No 40
>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=96.80 E-value=0.00074 Score=52.69 Aligned_cols=51 Identities=12% Similarity=0.186 Sum_probs=42.6
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHhhhCCC
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGITLNMIISKY-PHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.+++.++ .+...+|+|||||+|.++..+++.. |+.+++.+|. |+.++.|++
T Consensus 66 ~~l~~l~-l~~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~ 118 (213)
T d1dl5a1 66 LFMEWVG-LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKR 118 (213)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHhhh-ccccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhh
Confidence 4566666 7888999999999999999999876 7788999987 888888764
No 41
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.78 E-value=0.00041 Score=56.59 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=33.7
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 233 (244)
.+.++|||||||+|.++..|+++ +.+++.+|+ |..++.|+
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~--g~~v~gvD~S~~ml~~A~ 95 (292)
T d1xvaa_ 55 HGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYAL 95 (292)
T ss_dssp TTCCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred cCCCEEEEecCCCcHHHHHHHHc--CCeeeeccCchHHHHHHH
Confidence 44579999999999999999987 578999999 67776654
No 42
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Probab=96.78 E-value=0.00053 Score=54.66 Aligned_cols=48 Identities=21% Similarity=0.194 Sum_probs=37.2
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCC
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 233 (244)
.+++.|. +...+|||||||+|..+..+++..+. +.+..|+ |..++.|+
T Consensus 16 ~lI~~~~--~~~~~VLDlGCG~G~~~~~~~~~~~~-~v~GiD~S~~~l~~A~ 64 (252)
T d1ri5a_ 16 CLIRLYT--KRGDSVLDLGCGKGGDLLKYERAGIG-EYYGVDIAEVSINDAR 64 (252)
T ss_dssp HHHHHHC--CTTCEEEEETCTTTTTHHHHHHHTCS-EEEEEESCHHHHHHHH
T ss_pred HHHHHhC--CCcCEEEEecccCcHHHHHHHHcCCC-eEEEecCCHHHHHHHH
Confidence 4556653 55689999999999999999887543 6788898 77777775
No 43
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}
Probab=96.78 E-value=0.00019 Score=56.94 Aligned_cols=40 Identities=18% Similarity=0.278 Sum_probs=33.5
Q ss_pred CcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 193 HVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 193 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
..++|||||||+|.++..++++.. +++.+|+ |..++.|++
T Consensus 37 ~~~~vLDiGCG~G~~~~~l~~~g~--~v~GvD~S~~ml~~A~~ 77 (246)
T d1y8ca_ 37 VFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAEN 77 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHH
T ss_pred CCCeEEEEeCcCCHHHHHHHHhCC--ccEeeccchhhhhhccc
Confidence 357899999999999999999876 5788898 677777754
No 44
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}
Probab=96.76 E-value=0.00033 Score=55.02 Aligned_cols=41 Identities=17% Similarity=0.249 Sum_probs=34.6
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.+..+|||||||+|.++..++++ +.+++.+|+ |..++.|++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~l~~a~~ 82 (246)
T d2avna1 41 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVARE 82 (246)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCCchhccccccc--ceEEEEeeccccccccccc
Confidence 45578999999999999999876 568899998 888887765
No 45
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.56 E-value=0.00073 Score=55.20 Aligned_cols=49 Identities=22% Similarity=0.344 Sum_probs=39.4
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhC
Q 041256 182 EKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDA 232 (244)
Q Consensus 182 ~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 232 (244)
..+++... .+...+|||||||.|.++..++++++ ++++.+++ |+-++.|
T Consensus 52 ~~~~~~l~-l~~G~~VLDiGCG~G~~a~~~a~~~g-~~v~git~s~~Q~~~a 101 (285)
T d1kpga_ 52 DLALGKLG-LQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHV 101 (285)
T ss_dssp HHHHTTTT-CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHH
T ss_pred HHHHHHcC-CCCCCEEEEecCcchHHHHHHHhcCC-cceEEEeccHHHHHHH
Confidence 45667776 78889999999999999999999995 79988888 4434433
No 46
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.53 E-value=0.00085 Score=52.64 Aligned_cols=41 Identities=5% Similarity=-0.032 Sum_probs=34.8
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCC
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 233 (244)
.....+|||+|||.|..+..|+++ +.+++.+|+ |..|+.++
T Consensus 43 ~~~~~rvLd~GCG~G~~a~~LA~~--G~~V~gvD~S~~ai~~a~ 84 (229)
T d2bzga1 43 GKSGLRVFFPLCGKAVEMKWFADR--GHSVVGVEISELGIQEFF 84 (229)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHH
T ss_pred CCCCCEEEEeCCCCcHHHHHHHhC--CCcEEEEeCCHHHHHHHH
Confidence 456689999999999999999986 668999999 77887654
No 47
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.45 E-value=0.00057 Score=54.79 Aligned_cols=43 Identities=9% Similarity=0.144 Sum_probs=39.0
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
+...+++|||+|+|..+..|++++|+.+++..|. |+.++.|++
T Consensus 60 ~~~~~~LDiGtGsg~I~~~l~~~~~~~~~~~~Di~~~al~~A~~ 103 (250)
T d2h00a1 60 STLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKK 103 (250)
T ss_dssp CCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHH
T ss_pred cccceEEEeCCCchHHHHHHHHhCCCccccceecCHHHHHHHHH
Confidence 3457999999999999999999999999999999 888888865
No 48
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}
Probab=96.43 E-value=0.0015 Score=52.73 Aligned_cols=66 Identities=20% Similarity=0.129 Sum_probs=50.8
Q ss_pred HHHHHHHhcchhh----HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHhhhCCC
Q 041256 168 VFNNGMLSHTSIV----MEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKY-PHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 168 ~f~~aM~~~~~~~----~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.|...|...++.. +.-++...+ .....+|+|+|||+|.++..+++.. |+-+.+.+|. |+.++.|++
T Consensus 75 d~~~~~~r~~qiiypkd~~~Ii~~l~-i~pG~~VLDiG~GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~ 146 (266)
T d1o54a_ 75 DEIMNMKRRTQIVYPKDSSFIAMMLD-VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAES 146 (266)
T ss_dssp HHHHTCCC-CCCCCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHH
T ss_pred HHHhhccCCccccchHHHHHHHHhhC-CCCCCEEEECCCCCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Confidence 3445666555532 234566677 7888999999999999999999875 8999999998 888888764
No 49
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=96.43 E-value=0.0011 Score=53.06 Aligned_cols=66 Identities=15% Similarity=0.113 Sum_probs=42.3
Q ss_pred HHHHHHHhcchhhH----HHHHhhcCCCCCcceEEEecCCccHHHHHHHHH-CCCCeEEEccc-hHHhhhCCC
Q 041256 168 VFNNGMLSHTSIVM----EKVLESYKGFEHVKKLVDVGGGLGITLNMIISK-YPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 168 ~f~~aM~~~~~~~~----~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.|...|...++... ..++...+ .....+|+|+|||+|.++..+++. .|+-+.+.+|. ++.++.|++
T Consensus 57 ~~~~~~~r~~qiiypkD~~~Ii~~l~-i~pG~rVLEiG~GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~ 128 (250)
T d1yb2a1 57 YFGRVIRRNTQIISEIDASYIIMRCG-LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMD 128 (250)
T ss_dssp GHHHHC------------------CC-CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHH
T ss_pred HHHhhCCCCCcccCHHHHHHHHHHcC-CCCcCEEEEeeeeCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHH
Confidence 45555665555432 23444455 667799999999999999999987 68999999998 667777653
No 50
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.43 E-value=0.0016 Score=53.20 Aligned_cols=42 Identities=26% Similarity=0.482 Sum_probs=36.5
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 041256 182 EKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL 225 (244)
Q Consensus 182 ~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 225 (244)
..+++... ++...+|||||||.|.++..++++++ .+++.+++
T Consensus 51 ~~~~~~l~-l~~G~~VLDiGCG~G~~~~~~a~~~g-~~v~git~ 92 (291)
T d1kpia_ 51 KLALDKLN-LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTL 92 (291)
T ss_dssp HHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEES
T ss_pred HHHHHhcC-CCCCCEEEEecCcchHHHHHHHHhcC-cceeeccc
Confidence 45677777 88889999999999999999999997 58888888
No 51
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.37 E-value=0.0011 Score=53.43 Aligned_cols=52 Identities=17% Similarity=0.243 Sum_probs=33.4
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHH----HHCCCCe--EEEccc-hHHhhhCC
Q 041256 182 EKVLESYKGFEHVKKLVDVGGGLGITLNMII----SKYPHIK--GINYDL-PYVIKDAP 233 (244)
Q Consensus 182 ~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~----~~~P~l~--~~v~Dl-p~vi~~a~ 233 (244)
+.+++.+...+...+|||||||+|.++..++ .++|+.. .+.+|. +..++.++
T Consensus 29 ~~~l~~l~~~~~~~~VLDiGcG~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~ 87 (280)
T d1jqea_ 29 PGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYK 87 (280)
T ss_dssp HHHTTTTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHH
T ss_pred HHHHHHhccCCCCCeEEEEcCCCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHH
Confidence 3444443212344579999999999866654 4577764 578887 55565553
No 52
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.34 E-value=0.0018 Score=52.19 Aligned_cols=66 Identities=12% Similarity=0.167 Sum_probs=51.4
Q ss_pred HHHHHHHhcchhh----HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHH-CCCCeEEEccc-hHHhhhCCC
Q 041256 168 VFNNGMLSHTSIV----MEKVLESYKGFEHVKKLVDVGGGLGITLNMIISK-YPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 168 ~f~~aM~~~~~~~----~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.|...|...++.. +.-++...+ .....+|||+|||+|.++..|++. .|+-+.+.+|. ++.++.|++
T Consensus 68 ~~~~~~~r~tqiiypkD~s~Ii~~l~-i~PG~~VLE~G~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~ 139 (264)
T d1i9ga_ 68 DYVMSMPRGPQVIYPKDAAQIVHEGD-IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARR 139 (264)
T ss_dssp HHHTTSCSCSCCCCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHH
T ss_pred HHHhhccCCccccchHHHHHHHHHhC-CCCCCEEEecCcCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHH
Confidence 4555666666543 334566666 788899999999999999999998 79999999998 777777753
No 53
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}
Probab=96.32 E-value=0.001 Score=50.98 Aligned_cols=34 Identities=18% Similarity=0.102 Sum_probs=27.2
Q ss_pred ceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 195 KKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 195 ~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.+|||||||+|.++..+.+ .+.+|+ |..++.+++
T Consensus 38 ~~vLDiGcG~G~~~~~~~~------~~giD~s~~~~~~a~~ 72 (208)
T d1vlma_ 38 GRGVEIGVGTGRFAVPLKI------KIGVEPSERMAEIARK 72 (208)
T ss_dssp SCEEEETCTTSTTHHHHTC------CEEEESCHHHHHHHHH
T ss_pred CeEEEECCCCcccccccce------EEEEeCChhhcccccc
Confidence 5799999999999887743 467788 888887764
No 54
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.31 E-value=0.0012 Score=44.89 Aligned_cols=63 Identities=17% Similarity=0.213 Sum_probs=48.5
Q ss_pred HHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCc---eeecCcccc
Q 041256 33 VVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR---LYSLAPVSA 105 (244)
Q Consensus 33 a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~---~y~~t~~s~ 105 (244)
-.++.|...|... ++.|+.|||+.++++ ... +.+.|+.|...|+++......++ .|++|+.++
T Consensus 16 p~r~~IL~~L~~~---~~~~~~eLa~~l~is------~~~-vs~~l~~L~~~glV~~~~~~~d~r~~~~~LT~~G~ 81 (100)
T d1ub9a_ 16 PVRLGIMIFLLPR---RKAPFSQIQKVLDLT------PGN-LDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGM 81 (100)
T ss_dssp HHHHHHHHHHHHH---SEEEHHHHHHHTTCC------HHH-HHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHH
T ss_pred HHHHHHHHHhccC---CCeeHHHHHHHHhhc------ccc-ccHHHHHHhhhceeEEEEcCcCCccccccCCHHHH
Confidence 3467788888765 689999999999997 456 99999999999999864222222 388887664
No 55
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.10 E-value=0.0015 Score=50.46 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=33.6
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
+++ ++|+|+|||+|.++++++.+.+ .+++.+|. |..++.+++
T Consensus 45 l~g-~~vLDlg~GtG~l~i~a~~~g~-~~v~~vdi~~~~~~~a~~ 87 (201)
T d1wy7a1 45 IEG-KVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIE 87 (201)
T ss_dssp STT-CEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHH
T ss_pred CCC-CEEEECcCcchHHHHHHHHcCC-CEEEEEcCcHHHHHHHHH
Confidence 444 7999999999999998877644 58888998 777777754
No 56
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}
Probab=96.04 E-value=0.0029 Score=46.36 Aligned_cols=41 Identities=10% Similarity=-0.038 Sum_probs=34.7
Q ss_pred CcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 193 HVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 193 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
+.++|||+|||+|.++++.+.+... +++.+|. |..++.+++
T Consensus 14 ~g~~vlDl~~GtG~~~iea~~rga~-~v~~ve~~~~a~~~~~~ 55 (152)
T d2esra1 14 NGGRVLDLFAGSGGLAIEAVSRGMS-AAVLVEKNRKAQAIIQD 55 (152)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCC-EEEEECCCHHHHHHHHH
T ss_pred CCCeEEEcCCccCHHHHHHHHhCcc-eeeeehhchhhhhhhhh
Confidence 4589999999999999999988775 8899998 888877654
No 57
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.99 E-value=0.0044 Score=50.71 Aligned_cols=38 Identities=24% Similarity=0.198 Sum_probs=30.5
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccchHHhh
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDLPYVIK 230 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~ 230 (244)
.+.++|+|||||+|.+++.++++.+ -+++.+|..+...
T Consensus 34 ~~~~~VLDiGcG~G~lsl~aa~~Ga-~~V~aid~s~~~~ 71 (311)
T d2fyta1 34 FKDKVVLDVGCGTGILSMFAAKAGA-KKVLGVDQSEILY 71 (311)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTC-SEEEEEESSTHHH
T ss_pred CCcCEEEEECCCCCHHHHHHHHcCC-CEEEEEeCHHHHH
Confidence 3458999999999999999998866 3788889855443
No 58
>d1r1ta_ a.4.5.5 (A:) SmtB repressor {Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]}
Probab=95.78 E-value=0.0037 Score=42.46 Aligned_cols=52 Identities=17% Similarity=0.339 Sum_probs=43.9
Q ss_pred HHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 28 AVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 28 ~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
++|.--.++.|+..|.+ ++.|+.|||+.+|++ ... +.+-|+.|...|++...
T Consensus 18 kaL~~p~Rl~Il~~L~~----~~~~v~ela~~l~is------~st-vS~HL~~L~~aglV~~~ 69 (98)
T d1r1ta_ 18 AVLADPNRLRLLSLLAR----SELCVGDLAQAIGVS------ESA-VSHQLRSLRNLRLVSYR 69 (98)
T ss_dssp HHHCCHHHHHHHHHHTT----CCBCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEE
T ss_pred HHhCCHHHHHHHHHHHc----CCcCHHHHHHHHCcC------HHH-HHHHHHHHHHCCceEEE
Confidence 45556677888888976 689999999999997 456 99999999999999864
No 59
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.69 E-value=0.0064 Score=47.51 Aligned_cols=52 Identities=25% Similarity=0.185 Sum_probs=39.8
Q ss_pred HHHhhcC-CCCCcceEEEecCCccHHHHHHHHH-CCCCeEEEccc-hHHhhhCCC
Q 041256 183 KVLESYK-GFEHVKKLVDVGGGLGITLNMIISK-YPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 183 ~~~~~~~-~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.+++.+. ..+...+|||||||+|..+..+++. .|.-+++.+|. |+.++.|++
T Consensus 65 ~~le~L~~~l~~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~ 119 (224)
T d1i1na_ 65 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVN 119 (224)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhhccCCCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHH
Confidence 3455441 2566789999999999999888874 68889999997 778777653
No 60
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=95.69 E-value=0.01 Score=36.86 Aligned_cols=53 Identities=19% Similarity=0.167 Sum_probs=40.8
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeec
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSL 100 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~ 100 (244)
.|-+++.+.|- .|-++.|||+.+|++ +.. ++.+|+.|+..|.+.+ ..++.|-|
T Consensus 11 ~I~~~~~~~g~-~PP~vrdl~~~l~~~------e~~-~~~lL~~l~~~G~lvk---I~~d~yfh 63 (64)
T d1lvaa3 11 DLEDKYRVSRW-QPPSFKEVAGSFNLD------PSE-LEELLHYLVREGVLVK---INDEFYWH 63 (64)
T ss_dssp HHHHHHHHHTT-SCCBHHHHHHHTTCC------HHH-HHHHHHHHHHTTSEEE---SSSSBEEE
T ss_pred HHHHHHHHcCC-CCCcHHHHHHHhCCC------HHH-HHHHHHHHHHCCCEEE---eccccccc
Confidence 34555655442 589999999999997 566 9999999999999995 34576643
No 61
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.67 E-value=0.0029 Score=52.05 Aligned_cols=38 Identities=26% Similarity=0.260 Sum_probs=29.8
Q ss_pred cceEEEecCCccHHHHHHHHHCCCCeEEEccchHHhhhC
Q 041256 194 VKKLVDVGGGLGITLNMIISKYPHIKGINYDLPYVIKDA 232 (244)
Q Consensus 194 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a 232 (244)
.++|||||||+|.++..++++.+. +++.+|..+....+
T Consensus 34 ~~~VLDiGcG~G~ls~~aa~~Ga~-~V~avd~s~~~~~a 71 (316)
T d1oria_ 34 DKVVLDVGSGTGILCMFAAKAGAR-KVIGIECSSISDYA 71 (316)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCS-EEEEEECSTTHHHH
T ss_pred cCEEEEEecCCcHHHHHHHHhCCC-EEEEEcCcHHHhhh
Confidence 378999999999999988887554 78888986544443
No 62
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.67 E-value=0.0033 Score=51.95 Aligned_cols=39 Identities=28% Similarity=0.310 Sum_probs=30.7
Q ss_pred cceEEEecCCccHHHHHHHHHCCCCeEEEccchHHhhhCC
Q 041256 194 VKKLVDVGGGLGITLNMIISKYPHIKGINYDLPYVIKDAP 233 (244)
Q Consensus 194 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 233 (244)
.++|||||||+|.++..++++... +++..|..+.+..++
T Consensus 39 ~~~VLDlGcGtG~ls~~aa~~Ga~-~V~avd~s~~~~~a~ 77 (328)
T d1g6q1_ 39 DKIVLDVGCGTGILSMFAAKHGAK-HVIGVDMSSIIEMAK 77 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCS-EEEEEESSTHHHHHH
T ss_pred cCEEEEeCCCCCHHHHHHHHhCCC-EEEEEeCCHHHHHHH
Confidence 379999999999999887776543 788889876665554
No 63
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.66 E-value=0.0043 Score=42.86 Aligned_cols=44 Identities=16% Similarity=0.360 Sum_probs=36.9
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
.|+-.|.+. |+.|+.|||+.+|++ ... +.++|+-|...|++.+.
T Consensus 24 ~v~~~L~~~---g~~t~~eia~~~~i~------~~~-v~~~l~~L~~~GlV~r~ 67 (109)
T d1sfxa_ 24 RIYSLLLER---GGMRVSEIARELDLS------ARF-VRDRLKVLLKRGFVRRE 67 (109)
T ss_dssp HHHHHHHHH---CCBCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHhc---CCCCHHHHHHHhCCC------cch-HHHHHHHHHhCCCEEEE
Confidence 356667665 699999999999996 455 99999999999999853
No 64
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.63 E-value=0.0053 Score=50.82 Aligned_cols=66 Identities=14% Similarity=0.128 Sum_probs=50.6
Q ss_pred HHHHHHHHhcchhh----HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHH-CCCCeEEEccc-hHHhhhCC
Q 041256 167 DVFNNGMLSHTSIV----MEKVLESYKGFEHVKKLVDVGGGLGITLNMIISK-YPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 167 ~~f~~aM~~~~~~~----~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~v~Dl-p~vi~~a~ 233 (244)
..|...|...++.. +..++...+ .....+|+|+|||+|.++..|++. .|+-+++.+|. |+.++.|+
T Consensus 69 ~d~~~~~~r~tqiiypkD~~~Il~~l~-i~pG~rVLE~GtGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~ 140 (324)
T d2b25a1 69 EDYVVLMKRGTAITFPKDINMILSMMD-INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAK 140 (324)
T ss_dssp HHHHHHSCCSSCCCCHHHHHHHHHHHT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHH
T ss_pred HHHhhccCCCCcccccccHHHHHHHhC-CCCCCEEEEecccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHH
Confidence 34556676666542 334666777 788899999999999999999987 69999999998 66666654
No 65
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=95.55 E-value=0.0064 Score=38.51 Aligned_cols=44 Identities=18% Similarity=0.337 Sum_probs=38.4
Q ss_pred cChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 36 LDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 36 lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
..|+..|... +++|..|||+.+|++ +.- +.++++.|...|++.+
T Consensus 9 ~~Il~~l~~~---g~~sr~eLa~~~glS------~~T-v~~~l~~L~~~Glv~e 52 (71)
T d1z05a1 9 GRVYKLIDQK---GPISRIDLSKESELA------PAS-ITKITRELIDAHLIHE 52 (71)
T ss_dssp HHHHHHHHHH---CSBCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHc---CCcCHHHHHHHHCCC------HHH-HHHHHHHHHHCCCEEE
Confidence 3578888886 699999999999997 456 9999999999999984
No 66
>d1u2wa1 a.4.5.5 (A:12-119) Cadmium efflux system accessory protein CadC {Staphylococcus aureus [TaxId: 1280]}
Probab=95.53 E-value=0.0063 Score=42.05 Aligned_cols=55 Identities=13% Similarity=0.152 Sum_probs=46.7
Q ss_pred HHHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 26 LPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 26 ~~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
.+.+|.--.++.|+..|... ++.++.|||+.+|++ ... +.+-|+.|...|++...
T Consensus 24 ~~kaLadp~Rl~Il~~L~~~---~~~~v~ela~~l~~s------~s~-vS~HL~~L~~aGlv~~~ 78 (108)
T d1u2wa1 24 ILKAIADENRAKITYALCQD---EELCVCDIANILGVT------IAN-ASHHLRTLYKQGVVNFR 78 (108)
T ss_dssp HHHHHHSHHHHHHHHHHHHS---SCEEHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEC
T ss_pred HHHHhCCHHHHHHHHHHHhC---CCccHHHHHHHHccC------hhH-HHHHHHHHHHCCeeEEE
Confidence 45677777889999999764 689999999999997 456 99999999999999853
No 67
>d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.51 E-value=0.0096 Score=36.84 Aligned_cols=55 Identities=16% Similarity=0.288 Sum_probs=42.1
Q ss_pred hcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeecC
Q 041256 35 ELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSLA 101 (244)
Q Consensus 35 ~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~t 101 (244)
++.|...|.+. +..|.+|||+.+|++ ..- +++-+..|...|+..+. ..+ ..|++.
T Consensus 7 ~~~iL~~L~~~---~~~s~~eLa~~l~vS------~~t-i~r~i~~L~~~G~~I~~-~~g-~GY~L~ 61 (63)
T d1biaa1 7 PLKLIALLANG---EFHSGEQLGETLGMS------RAA-INKHIQTLRDWGVDVFT-VPG-KGYSLP 61 (63)
T ss_dssp HHHHHHHHTTS---SCBCHHHHHHHHTSC------HHH-HHHHHHHHHHTTCCCEE-ETT-TEEECS
T ss_pred HHHHHHHHHHC---CcCCHHHHHHHHCcC------HHH-HHHHHHHHHHCCCcEEE-eCC-CeEEeC
Confidence 45677888764 689999999999997 455 99999999999985532 222 358875
No 68
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=95.51 E-value=0.0031 Score=49.55 Aligned_cols=43 Identities=16% Similarity=0.150 Sum_probs=37.2
Q ss_pred CCCcceEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHhhhCC
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKY-PHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a~ 233 (244)
++...+|+|+|||+|.+...+++.. |+-+++.+|. |..++.++
T Consensus 71 i~pG~~VLDlGaGsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~ 115 (227)
T d1g8aa_ 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELV 115 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHH
T ss_pred cCCCCEEEEeccCCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHH
Confidence 5677999999999999999999986 8889999998 77766654
No 69
>d1r1ua_ a.4.5.5 (A:) Metal-sensing transcriptional repressor CzrA {Staphylococcus aureus [TaxId: 1280]}
Probab=95.50 E-value=0.005 Score=41.45 Aligned_cols=53 Identities=21% Similarity=0.298 Sum_probs=44.2
Q ss_pred HHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 27 PAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 27 ~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
+.+|.--.++.|+..|.. ++.++.||++.+|++ ... +.+-|+.|...|++...
T Consensus 12 fkaL~d~~Rl~Il~~L~~----~~~~v~el~~~l~~s------~~~-vS~HL~~L~~~glv~~~ 64 (94)
T d1r1ua_ 12 FKALGDYNRIRIMELLSV----SEASVGHISHQLNLS------QSN-VSHQLKLLKSVHLVKAK 64 (94)
T ss_dssp HHHTCSHHHHHHHHHHHH----CCBCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEE
T ss_pred HHHhCCHHHHHHHHHHHc----CCccHHHHHHHHCCC------HHH-HHHHHHHHHHCCceEEE
Confidence 345555577888898987 699999999999997 456 99999999999999864
No 70
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}
Probab=95.39 E-value=0.0037 Score=51.51 Aligned_cols=43 Identities=26% Similarity=0.352 Sum_probs=38.4
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
+.+++|+.||||.|..+.++++..|..+.+++|+ |.|++.+++
T Consensus 76 ~~pk~VLiiG~G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~ 119 (312)
T d1uira_ 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKR 119 (312)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHH
T ss_pred CCcceEEEeCCCchHHHHHHHhcCCcceEEEecCCHHHHHHHHh
Confidence 5678999999999999999999888889999998 899987753
No 71
>d2hoea1 a.4.5.63 (A:10-71) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=95.21 E-value=0.0074 Score=37.28 Aligned_cols=42 Identities=12% Similarity=0.264 Sum_probs=37.0
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
.|+..|.+ +|+|-.|||+.+|++ ..- +.++++.|...|++.+
T Consensus 3 ~Il~~i~~----~pisr~eLa~~~gls------~~T-Vs~~v~~L~~~GlV~e 44 (62)
T d2hoea1 3 RILKRIMK----SPVSRVELAEELGLT------KTT-VGEIAKIFLEKGIVVE 44 (62)
T ss_dssp CSHHHHHH----SCBCHHHHHHHHTCC------HHH-HHHHHHHHHHHTSEEE
T ss_pred HHHHHHHH----CCcCHHHHHHHHCcC------HHH-HHHHHHHHHHCCCEEE
Confidence 47788876 699999999999997 455 9999999999999985
No 72
>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}
Probab=95.12 E-value=0.0045 Score=49.95 Aligned_cols=41 Identities=20% Similarity=0.269 Sum_probs=36.0
Q ss_pred CcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 193 HVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 193 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
+..+++|+|||+|..+..++ ++|+.+++..|. |+.++.|++
T Consensus 110 ~~~~vld~g~GsG~i~~~la-~~~~~~v~a~Dis~~Al~~A~~ 151 (271)
T d1nv8a_ 110 GIKTVADIGTGSGAIGVSVA-KFSDAIVFATDVSSKAVEIARK 151 (271)
T ss_dssp TCCEEEEESCTTSHHHHHHH-HHSSCEEEEEESCHHHHHHHHH
T ss_pred cccEEEEeeeeeehhhhhhh-hcccceeeechhhhhHHHHHHH
Confidence 45689999999999999987 579999999998 888888875
No 73
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=95.07 E-value=0.017 Score=35.86 Aligned_cols=56 Identities=16% Similarity=0.206 Sum_probs=42.2
Q ss_pred hcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeecCc
Q 041256 35 ELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSLAP 102 (244)
Q Consensus 35 ~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~t~ 102 (244)
...|.+.|.+.. +++|..+||+.++++ ..- ++|-+..|...|+-... . .+.|.+.+
T Consensus 9 ~~~Il~~L~~~~--~~vs~~~La~~l~VS------~~T-I~rdi~~L~~~G~~I~~--~-~gGY~L~~ 64 (65)
T d1j5ya1 9 LKSIVRILERSK--EPVSGAQLAEELSVS------RQV-IVQDIAYLRSLGYNIVA--T-PRGYVLAG 64 (65)
T ss_dssp HHHHHHHHHHCS--SCBCHHHHHHHHTSC------HHH-HHHHHHHHHHHTCCCEE--E-TTEEECCT
T ss_pred HHHHHHHHHHcC--CCCcHHHHHHHHCCC------HHH-HHHHHHHHHHCCCeEEE--e-CCCEEeCC
Confidence 456778887653 689999999999997 445 99999999999974321 2 35688754
No 74
>d1s3ja_ a.4.5.28 (A:) Putative transcriptional regulator YusO {Bacillus subtilis [TaxId: 1423]}
Probab=95.06 E-value=0.025 Score=40.40 Aligned_cols=62 Identities=21% Similarity=0.198 Sum_probs=45.4
Q ss_pred cChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCce---eecCcccccc
Q 041256 36 LDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRL---YSLAPVSAYF 107 (244)
Q Consensus 36 lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~---y~~t~~s~~l 107 (244)
..++..|... ++.|..+||+.++++ +.. +.+++.-|+..|++++.+-..+.+ +.+|+.+..+
T Consensus 38 ~~iL~~l~~~---~~~t~~~la~~~~i~------~~~-vs~~l~~L~~~glv~r~~~~~D~R~~~v~lT~~G~~~ 102 (143)
T d1s3ja_ 38 LFVLASLKKH---GSLKVSEIAERMEVK------PSA-VTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIK 102 (143)
T ss_dssp HHHHHHHHHH---SEEEHHHHHHHHTSC------HHH-HHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHHH
T ss_pred HHHHHHHHHC---CCCCHHHHHHHHCcC------HHH-HHHHHHHHHHhhhheeeeecCCCCceEEEECHHHHHH
Confidence 3466777765 589999999999997 556 999999999999998642222232 6666665533
No 75
>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}
Probab=95.04 E-value=0.0069 Score=45.22 Aligned_cols=42 Identities=12% Similarity=0.083 Sum_probs=34.2
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.....+|+|+|||+|.++++.+.+. .+++.+|. |..++.+++
T Consensus 39 ~~~g~~vLDl~~G~G~~~i~a~~~g--a~vv~vD~~~~a~~~~~~ 81 (171)
T d1ws6a1 39 YPRRGRFLDPFAGSGAVGLEAASEG--WEAVLVEKDPEAVRLLKE 81 (171)
T ss_dssp CTTCCEEEEETCSSCHHHHHHHHTT--CEEEEECCCHHHHHHHHH
T ss_pred ccCCCeEEEeccccchhhhhhhhcc--chhhhcccCHHHHhhhhH
Confidence 3455799999999999999988874 47778898 888887754
No 76
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=95.04 E-value=0.031 Score=39.94 Aligned_cols=47 Identities=19% Similarity=0.302 Sum_probs=38.1
Q ss_pred hcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccccee
Q 041256 35 ELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSF 91 (244)
Q Consensus 35 ~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~ 91 (244)
+..+...|... +++|..+||+.++++ ... +.|+++.|+..|++++.+
T Consensus 38 q~~vL~~l~~~---~~~t~~~la~~l~~~------~~~-vsr~l~~L~~~G~v~r~~ 84 (141)
T d1lnwa_ 38 DVHVLKLIDEQ---RGLNLQDLGRQMCRD------KAL-ITRKIRELEGRNLVRRER 84 (141)
T ss_dssp HHHHHHHHHSS---TTCBHHHHHHHTTCC------HHH-HHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHC---CCCCHHHHHHHHCcc------HhH-HHHHHHHHHHhhceeeec
Confidence 34456666664 579999999999997 456 999999999999998643
No 77
>d1z6ra1 a.4.5.63 (A:12-81) Mlc protein N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.03 E-value=0.013 Score=36.99 Aligned_cols=44 Identities=11% Similarity=0.228 Sum_probs=38.3
Q ss_pred cChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 36 LDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 36 lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
..|+..|... +++|-.|||+.+|++ ..- +.++++.|...|++.+
T Consensus 8 ~~Il~~i~~~---g~~sr~eLa~~~gLS------~~T-vs~iv~~L~~~glv~e 51 (70)
T d1z6ra1 8 GAVYRLIDQL---GPVSRIDLSRLAQLA------PAS-ITKIVHEMLEAHLVQE 51 (70)
T ss_dssp HHHHHHHHSS---CSCCHHHHHHHTTCC------HHH-HHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHc---CCcCHHHHHHHHCcC------HHH-HHHHHHHHHHCCCEEe
Confidence 3478888876 799999999999997 445 9999999999999984
No 78
>d2d1ha1 a.4.5.50 (A:1-109) Hypothetical transcriptional regulator ST1889 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=95.02 E-value=0.0059 Score=42.01 Aligned_cols=44 Identities=11% Similarity=0.201 Sum_probs=35.4
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
|+..|...+ ||+|..+||+.++++ +.. +.++|+-|...|++.+.
T Consensus 26 iL~~L~~~~--~~~t~~eLa~~~~i~------~~t-vs~~l~~L~~~GlV~r~ 69 (109)
T d2d1ha1 26 VLLKMVEIE--KPITSEELADIFKLS------KTT-VENSLKKLIELGLVVRT 69 (109)
T ss_dssp HHHHHHHHC--SCEEHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHcC--CCCCHHHHHHHHCcc------HhH-HHHHHHHHHHCCCEEEe
Confidence 444444333 689999999999997 456 99999999999999864
No 79
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}
Probab=94.96 E-value=0.01 Score=46.38 Aligned_cols=56 Identities=18% Similarity=0.342 Sum_probs=40.4
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC----CCCceee
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS----YPGTLFI 241 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~----~~~i~~~ 241 (244)
.+++.++ .....+|+|||||+|.++..+++... +++.+|. |+.++.|++ .++|+++
T Consensus 61 ~ml~~L~-l~~g~~VLdIG~GsGy~ta~La~l~~--~V~aiE~~~~~~~~A~~~~~~~~nv~~~ 121 (224)
T d1vbfa_ 61 FMLDELD-LHKGQKVLEIGTGIGYYTALIAEIVD--KVVSVEINEKMYNYASKLLSYYNNIKLI 121 (224)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTCSSEEEE
T ss_pred HHHHHhh-hcccceEEEecCCCCHHHHHHHHHhc--ccccccccHHHHHHHHHHHhcccccccc
Confidence 3566677 78888999999999999888777654 5666665 777776654 3455543
No 80
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}
Probab=94.84 E-value=0.0072 Score=48.77 Aligned_cols=43 Identities=23% Similarity=0.263 Sum_probs=38.1
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
..+++|+-||||.|..+.++++..|..+.+++|+ |+|++.+++
T Consensus 74 ~~p~~vLiiGgG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~ 117 (274)
T d1iy9a_ 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKK 117 (274)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHH
T ss_pred CCcceEEecCCCCcHHHHHHHhcCCcceEEEecCCHHHHHHHHH
Confidence 4678999999999999999998888889999998 999998753
No 81
>d1xd7a_ a.4.5.55 (A:) Hypothetical protein ywnA {Bacillus subtilis [TaxId: 1423]}
Probab=94.77 E-value=0.017 Score=40.82 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=31.4
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
++.|.++||+.++++ +.. ++++|+.|...|+++-
T Consensus 17 ~~~ss~~IA~~~~~~------~~~-v~kIl~~L~~aglV~s 50 (127)
T d1xd7a_ 17 EKTSSEIIADSVNTN------PVV-VRRMISLLKKADILTS 50 (127)
T ss_dssp SCCCHHHHHHHHTSC------HHH-HHHHHHHHHHTTSEEC
T ss_pred CCCCHHHHHHHhCcC------HHH-HHHHHHHHHHhCcccc
Confidence 589999999999997 678 9999999999999984
No 82
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.76 E-value=0.0073 Score=49.01 Aligned_cols=44 Identities=18% Similarity=0.276 Sum_probs=39.1
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
-..+++|+-||||.|..+.++++..|..+.++.|+ |.|++.+++
T Consensus 76 ~~~pk~vLiiGgG~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~ 120 (285)
T d2o07a1 76 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKK 120 (285)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHH
T ss_pred CcCcCeEEEeCCCchHHHHHHHHcCCcceeeeccCCHHHHHHHHh
Confidence 35678999999999999999998888889999998 999999864
No 83
>d1ylfa1 a.4.5.55 (A:5-142) Hypothetical protein BC1842 {Bacillus cereus [TaxId: 1396]}
Probab=94.71 E-value=0.014 Score=41.76 Aligned_cols=45 Identities=7% Similarity=0.094 Sum_probs=35.8
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeecCc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSLAP 102 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~t~ 102 (244)
.+.|.++||+.++++ +.. ++++|+.|...|++.-. .|.|.|.+..
T Consensus 22 ~~vss~~IA~~~~i~------~~~-l~kil~~L~~aGlv~S~--rG~GG~~L~~ 66 (138)
T d1ylfa1 22 SLCTSDYMAESVNTN------PVV-IRKIMSYLKQAGFVYVN--RGPGGAGLLK 66 (138)
T ss_dssp GGCCHHHHHHHHTSC------HHH-HHHHHHHHHHTTSEEEC-----CCEEESS
T ss_pred CcCcHHHHHHHHCcC------HHH-HHHHHHHHHHCCCeEee--cCCCCceecC
Confidence 579999999999997 678 99999999999999842 3456676643
No 84
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.55 E-value=0.0094 Score=48.07 Aligned_cols=42 Identities=21% Similarity=0.246 Sum_probs=36.3
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.++++|+-||||.|..+.++++ +|..+.+++|+ |.|++.+++
T Consensus 71 ~~p~~vLiiG~G~G~~~~~~l~-~~~~~v~~VEiD~~Vi~~a~~ 113 (276)
T d1mjfa_ 71 PKPKRVLVIGGGDGGTVREVLQ-HDVDEVIMVEIDEDVIMVSKD 113 (276)
T ss_dssp SCCCEEEEEECTTSHHHHHHTT-SCCSEEEEEESCHHHHHHHHH
T ss_pred CCCceEEEecCCchHHHHHHHH-hCCceEEEecCCHHHHHHHHH
Confidence 5678999999999999999986 56678889998 999998763
No 85
>d2p4wa1 a.4.5.64 (A:1-194) Transcriptional regulatory protein PF1790 {Pyrococcus furiosus [TaxId: 2261]}
Probab=94.55 E-value=0.015 Score=44.22 Aligned_cols=66 Identities=12% Similarity=0.148 Sum_probs=49.0
Q ss_pred HHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCC-----ceeecCcc
Q 041256 29 VMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQ-----RLYSLAPV 103 (244)
Q Consensus 29 ~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~-----~~y~~t~~ 103 (244)
+|.-=.++.|+..|.+ +|.|+.|||+.+|++ +.. +.+-|+.|...|+++...+... ..|+++..
T Consensus 11 ~l~~~~R~~Il~~L~~----~~~~~~ela~~l~~s------~~~-v~~HL~~L~~~Glv~~~~~~~~~G~~~~~y~l~~~ 79 (194)
T d2p4wa1 11 VLGNETRRRILFLLTK----RPYFVSELSRELGVG------QKA-VLEHLRILEEAGLIESRVEKIPRGRPRKYYMIKKG 79 (194)
T ss_dssp HHHSHHHHHHHHHHHH----SCEEHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEEECCBTTBCCCEEEEECTT
T ss_pred HhCCHHHHHHHHHHHh----CCCCHHHHHHHHCcC------HHH-HHHHHHHHHHCCCeEEEEeecCCCCceEEEEeccc
Confidence 3333456677888876 699999999999997 566 9999999999999985322111 25787776
Q ss_pred cc
Q 041256 104 SA 105 (244)
Q Consensus 104 s~ 105 (244)
+.
T Consensus 80 ~~ 81 (194)
T d2p4wa1 80 LR 81 (194)
T ss_dssp EE
T ss_pred ce
Confidence 54
No 86
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}
Probab=94.44 E-value=0.0096 Score=48.53 Aligned_cols=43 Identities=30% Similarity=0.369 Sum_probs=38.3
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
..+++|+=||||.|..+.++++..|..+.+++|+ |.|++.+++
T Consensus 88 ~~pk~VLiiGgG~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~ 131 (295)
T d1inla_ 88 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARK 131 (295)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCceEEEecCCchHHHHHHHhcCCCceEEEecCCHHHHHHHHH
Confidence 4678999999999999999999888888999998 999998864
No 87
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}
Probab=94.42 E-value=0.011 Score=48.64 Aligned_cols=43 Identities=23% Similarity=0.268 Sum_probs=38.1
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
..+++|+-||||.|..+.++++..|-.+.+++|+ |.|++.+++
T Consensus 105 ~~pk~VLIiGgG~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~ 148 (312)
T d2b2ca1 105 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKK 148 (312)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEeCCCchHHHHHHHHcCCcceEEEEcccHHHHHHHHh
Confidence 5678999999999999999998777778999998 999998864
No 88
>d2hr3a1 a.4.5.28 (A:2-146) Probable transcriptional regulator PA3067 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=94.33 E-value=0.021 Score=41.01 Aligned_cols=64 Identities=19% Similarity=0.170 Sum_probs=44.6
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCc---eeecCccccc
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR---LYSLAPVSAY 106 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~---~y~~t~~s~~ 106 (244)
.++.+...|...+ |++|..+||+.++++ ... +.++++-|...|++++.+...+. .+.+|+.+..
T Consensus 35 ~q~~vL~~L~~~~--g~~t~~~La~~~~~~------~~~-vs~~i~~L~~~glv~r~~~~~DrR~~~i~LT~~G~~ 101 (145)
T d2hr3a1 35 SQLVVLGAIDRLG--GDVTPSELAAAERMR------SSN-LAALLRELERGGLIVRHADPQDGRRTRVSLSSEGRR 101 (145)
T ss_dssp HHHHHHHHHHHTT--SCBCHHHHHHHTTCC------HHH-HHHHHHHHHHTTSEEEEC------CCEEEECHHHHH
T ss_pred HHHHHHHHHHHcC--CCCCHHHHHHHHCCC------HHH-HHHHHHHHHHcCCeEeeeCccchhHHHhccCHHHHH
Confidence 3455666676543 689999999999997 556 99999999999999863211111 3566665543
No 89
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]}
Probab=94.30 E-value=0.018 Score=41.07 Aligned_cols=62 Identities=15% Similarity=0.075 Sum_probs=46.4
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCc---eeecCcccc
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR---LYSLAPVSA 105 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~---~y~~t~~s~ 105 (244)
-+.-++..|... +++|..+||+.++++ ... +.++++.|...|++++.+.+.+. ..++|+.+.
T Consensus 33 ~q~~iL~~l~~~---~~~t~~~La~~l~i~------~~~-vs~~v~~L~~~gli~r~~~~~D~R~~~l~lT~~G~ 97 (140)
T d2etha1 33 TELYAFLYVALF---GPKKMKEIAEFLSTT------KSN-VTNVVDSLEKRGLVVREMDPVDRRTYRVVLTEKGK 97 (140)
T ss_dssp HHHHHHHHHHHH---CCBCHHHHHHHTTSC------HHH-HHHHHHHHHHTTSEEEEECTTTSSCEEEEECHHHH
T ss_pred HHHHHHHHHHHc---CCcCHHHHHHHHCcC------HHH-HHHHHHHHHHCCCeeeeecccccchhhhhcCHHHH
Confidence 345577778776 589999999999997 556 99999999999999974322222 355555554
No 90
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.30 E-value=0.0021 Score=50.67 Aligned_cols=42 Identities=14% Similarity=0.048 Sum_probs=31.5
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.+..+|||||||.|.++..+++... -+++..|+ |..++.|++
T Consensus 50 ~~g~~vLDlGcG~G~~~~~~~~~~~-~~v~giD~S~~~i~~a~~ 92 (257)
T d2a14a1 50 LQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEK 92 (257)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHhHHHHhcccc-CcEEEecCCHHHHHHHHH
Confidence 4568999999999988766655432 26899998 777777753
No 91
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=94.26 E-value=0.042 Score=38.98 Aligned_cols=62 Identities=10% Similarity=0.104 Sum_probs=44.4
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCc---eeecCccccccc
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR---LYSLAPVSAYFV 108 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~---~y~~t~~s~~l~ 108 (244)
-+...|... ++.|..+||+.++++ ... +.+++.-|...|++++.....++ .+.+|+.+..+.
T Consensus 34 ~iL~~i~~~---~~~t~~~la~~l~i~------~~t-vs~~l~~L~~~gli~r~~~~~D~R~~~i~LT~~G~~~~ 98 (139)
T d2a61a1 34 DILQKIYFE---GPKRPGELSVLLGVA------KST-VTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVI 98 (139)
T ss_dssp HHHHHHHHH---CCBCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHc---CCCCHHHHHHHhCCC------ccc-chHHHHHHHhcCeeeeeeccCCCCeEEEEECHHHHHHH
Confidence 355556554 589999999999997 456 99999999999999864322222 366666655433
No 92
>d1ku9a_ a.4.5.36 (A:) DNA-binding protein Mj223 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=94.21 E-value=0.018 Score=41.51 Aligned_cols=45 Identities=13% Similarity=0.276 Sum_probs=37.4
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
.|+-.|..++ +|+|..|||+.+|++ ... +.+.|+.|...|++.+.
T Consensus 30 ~i~~~L~~~~--~plt~~ela~~l~vs------k~~-vs~~l~~L~~~GlV~r~ 74 (151)
T d1ku9a_ 30 AVYAILYLSD--KPLTISDIMEELKIS------KGN-VSMSLKKLEELGFVRKV 74 (151)
T ss_dssp HHHHHHHHCS--SCEEHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHhCC--CCcCHHHHHHHhCCC------cch-HHHHHHHHHHCCCEEEE
Confidence 4566665543 689999999999997 556 99999999999999864
No 93
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.13 E-value=0.025 Score=43.74 Aligned_cols=50 Identities=18% Similarity=0.225 Sum_probs=36.6
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.+++.++ ..+..+|+|||+|+|..+.-+++-. +-+++.+|. |+.++.+++
T Consensus 69 ~ml~~L~-l~~g~~VLeIGsGsGY~taila~l~-g~~V~~ie~~~~l~~~a~~ 119 (215)
T d1jg1a_ 69 IMLEIAN-LKPGMNILEVGTGSGWNAALISEIV-KTDVYTIERIPELVEFAKR 119 (215)
T ss_dssp HHHHHHT-CCTTCCEEEECCTTSHHHHHHHHHH-CSCEEEEESCHHHHHHHHH
T ss_pred HHHHhhc-cCccceEEEecCCCChhHHHHHHhh-CceeEEEeccHHHHHHHHH
Confidence 4456666 7777899999999999998777654 344655655 777777764
No 94
>d3ctaa1 a.4.5.28 (A:5-89) Ta1064 (RFK), N-terminal domain {Thermoplasma acidophilum [TaxId: 2303]}
Probab=94.08 E-value=0.0088 Score=39.35 Aligned_cols=49 Identities=8% Similarity=0.131 Sum_probs=38.3
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecC-CceeecCcccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDG-QRLYSLAPVSA 105 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~-~~~y~~t~~s~ 105 (244)
+++|..+||+.++++ +.. +.++|.-|...|++.+.. ++ .-.|.+|+.+.
T Consensus 20 ~~lt~~eLa~~l~i~------~~~-vs~~l~~Le~~GlV~r~~-D~R~~~i~LT~~G~ 69 (85)
T d3ctaa1 20 AYLTSSKLADMLGIS------QQS-ASRIIIDLEKNGYITRTV-TKRGQILNITEKGL 69 (85)
T ss_dssp EECCHHHHHHHHTSC------HHH-HHHHHHHHHHTTSEEEEE-ETTEEEEEECHHHH
T ss_pred CCCCHHHHHHHHCCC------HHH-HHHHHHHHHHCCCeeeec-ccccccceECHHHH
Confidence 689999999999997 556 999999999999999632 21 12366676655
No 95
>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}
Probab=93.94 E-value=0.034 Score=41.83 Aligned_cols=57 Identities=19% Similarity=0.153 Sum_probs=44.3
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC--CCCcee
Q 041256 181 MEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS--YPGTLF 240 (244)
Q Consensus 181 ~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~--~~~i~~ 240 (244)
...+++.+. .....++||...|.|.++.++++++ .+++.+|+ |++++.+++ .+++.+
T Consensus 7 l~Evl~~l~-~~~g~~~vD~T~G~GGhs~~iL~~~--~~viaiD~D~~ai~~a~~~~~~~~~~ 66 (182)
T d1wg8a2 7 YQEALDLLA-VRPGGVYVDATLGGAGHARGILERG--GRVIGLDQDPEAVARAKGLHLPGLTV 66 (182)
T ss_dssp HHHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHTCCTTEEE
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCcHHHHHHhccc--CcEEEEhhhhhHHHHHhhccccceeE
Confidence 356666665 5667899999999999999999974 58899998 888888764 244443
No 96
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]}
Probab=93.84 E-value=0.019 Score=45.34 Aligned_cols=51 Identities=8% Similarity=0.240 Sum_probs=39.1
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 181 MEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 181 ~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
...+++..+ .....+||+||+|.|.+...|+++.. +.+.+|. +.-++.+++
T Consensus 18 i~kIv~~~~-~~~~d~VLEIGpG~G~LT~~L~~~~~--~v~aIE~D~~l~~~l~~ 69 (245)
T d1yuba_ 18 LNQIIKQLN-LKETDTVYEIGTGKGHLTTKLAKISK--QVTSIELDSHLFNLSSE 69 (245)
T ss_dssp HHHHHHHCC-CCSSEEEEECSCCCSSCSHHHHHHSS--EEEESSSSCSSSSSSSC
T ss_pred HHHHHHhcC-CCCCCeEEEECCCccHHHHHHHhhcC--ceeEeeecccchhhhhh
Confidence 456777776 77789999999999999999999855 5666666 455555554
No 97
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}
Probab=93.79 E-value=0.061 Score=42.02 Aligned_cols=58 Identities=9% Similarity=0.241 Sum_probs=41.0
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCC----CCCCceee
Q 041256 181 MEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAP----SYPGTLFI 241 (244)
Q Consensus 181 ~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~----~~~~i~~~ 241 (244)
...+++..+ .....+|++||+|.|.+...|+++... .+.+|. +..++..+ +.++++++
T Consensus 10 ~~~iv~~~~-~~~~d~VlEIGpG~G~LT~~Ll~~~~~--v~avE~D~~l~~~l~~~~~~~~n~~i~ 72 (235)
T d1qama_ 10 IDKIMTNIR-LNEHDNIFEIGSGKGHFTLELVQRCNF--VTAIEIDHKLCKTTENKLVDHDNFQVL 72 (235)
T ss_dssp HHHHHTTCC-CCTTCEEEEECCTTSHHHHHHHHHSSE--EEEECSCHHHHHHHHHHTTTCCSEEEE
T ss_pred HHHHHHhcC-CCCCCeEEEECCCchHHHHHHHhCcCc--eEEEeeccchHHHHHHHhhcccchhhh
Confidence 456777776 778899999999999999999998655 555554 55554443 24555543
No 98
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=93.76 E-value=0.017 Score=46.87 Aligned_cols=43 Identities=19% Similarity=0.198 Sum_probs=38.2
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
+++++|+=||||.|..+.++++..|-.+.+++|+ |+|++.+++
T Consensus 79 ~~pk~VLiiGgG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~ 122 (290)
T d1xj5a_ 79 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQ 122 (290)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHH
T ss_pred CCCcceEEecCCchHHHHHHHhcccceeeEEecCCHHHHHHHHH
Confidence 5678999999999999999999778778999998 999998864
No 99
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=93.72 E-value=0.014 Score=46.54 Aligned_cols=42 Identities=24% Similarity=0.178 Sum_probs=35.9
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.+..+|||+|||.|.++..++++ +..+++..|+ |..++.+++
T Consensus 106 ~~g~~VlD~~aG~G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~ 148 (260)
T d2frna1 106 KPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVE 148 (260)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHH-TCCEEEEECCCHHHHHHHHH
T ss_pred CCccEEEECcceEcHHHHHHHHh-CCcEEEEecCCHHHHHHHHH
Confidence 45689999999999999999986 4568999999 888888764
No 100
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.65 E-value=0.068 Score=33.43 Aligned_cols=58 Identities=9% Similarity=0.176 Sum_probs=43.8
Q ss_pred cChhhHHhhcCCCCCCCHHHHHHhC-CCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeecCc
Q 041256 36 LDVFEIISKAGPGAKLSVAEIVAQI-PLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSLAP 102 (244)
Q Consensus 36 lgifd~L~~~~~~g~~t~~eLA~~~-~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~t~ 102 (244)
..||+.|...+.+.++++.+|++++ +++ +.. ++..++.|+..|++-- ..+++.|..|.
T Consensus 9 ~~V~~~i~s~~~~eGi~~~el~~~l~~~~------~~~-i~~aid~L~~eG~IYs--TiDddHfkstd 67 (69)
T d1dpua_ 9 NQVLNLIKACPRPEGLNFQDLKNQLKHMS------VSS-IKQAVDFLSNEGHIYS--TVDDDHFKSTD 67 (69)
T ss_dssp HHHHHHHHHCCCTTTEEHHHHHHHSTTSC------HHH-HHHHHHHHHHTTSEEE--CSSTTEEEESS
T ss_pred HHHHHHHHhCCCccCcCHHHHHHHccCCC------HHH-HHHHHHHHHhCCceec--ccccchhcccC
Confidence 3466666665545689999999998 686 556 9999999999998863 24567887664
No 101
>d1ulya_ a.4.5.58 (A:) Hypothetical protein PH1932 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=93.61 E-value=0.03 Score=42.11 Aligned_cols=68 Identities=6% Similarity=0.136 Sum_probs=51.0
Q ss_pred HHHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeec-CC----ceeec
Q 041256 26 LPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVD-GQ----RLYSL 100 (244)
Q Consensus 26 ~~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~-~~----~~y~~ 100 (244)
...+|.--.++.|++.|.. +|.|+.|||+.+|++ +.. +.+-|+.|...|++....+. .. -.|.+
T Consensus 12 ~~~~l~~p~R~~Il~~L~~----~~~s~~ela~~lg~s------~~~-v~~hl~~L~~~glv~~~~~~~~~g~~~k~y~~ 80 (190)
T d1ulya_ 12 VIKVMLEDTRRKILKLLRN----KEMTISQLSEILGKT------PQT-IYHHIEKLKEAGLVEVKRTEMKGNLVEKYYGR 80 (190)
T ss_dssp HHHHHHSHHHHHHHHHHTT----CCBCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEEEEEEETTEEEEEEEE
T ss_pred HHHHhCCHHHHHHHHHHHh----CCCCHHHHHHHHCcC------HHH-HHHHHHHHHHCCCeEEEEeeccCCcceEEEEE
Confidence 3456666677888999975 799999999999997 556 99999999999999642111 11 23777
Q ss_pred Cccc
Q 041256 101 APVS 104 (244)
Q Consensus 101 t~~s 104 (244)
|+.+
T Consensus 81 ~~~~ 84 (190)
T d1ulya_ 81 TADV 84 (190)
T ss_dssp SSSE
T ss_pred cccc
Confidence 7654
No 102
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=93.56 E-value=0.031 Score=39.49 Aligned_cols=67 Identities=7% Similarity=0.140 Sum_probs=47.4
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCc---eeecCccccccc
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR---LYSLAPVSAYFV 108 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~---~y~~t~~s~~l~ 108 (244)
.++.++..|...+ ++++|..|||+.++++ ... +.++++.|...|++.+.....+. .+.+|+.+..+.
T Consensus 30 ~q~~vL~~l~~~~-~~~it~~ela~~~~~~------~~~-vs~~l~~L~~~g~v~r~~~~~D~R~~~i~lT~~G~~~~ 99 (135)
T d3broa1 30 TQMTIIDYLSRNK-NKEVLQRDLESEFSIK------SST-ATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLE 99 (135)
T ss_dssp HHHHHHHHHHHTT-TSCCBHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHTTH
T ss_pred HHHHHHHHHHHcC-CCCCCHHHHHHHHCcC------HhH-HHHHHHHHHHHHHHHHHhhhhhhhhhhhcccHHHHHHH
Confidence 3444666677653 2579999999999997 456 99999999999999864222222 477777655433
No 103
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=93.53 E-value=0.047 Score=42.36 Aligned_cols=51 Identities=14% Similarity=0.222 Sum_probs=36.9
Q ss_pred HHHhhcC-CCCCcceEEEecCCccHHHHHHHHH------CCCCeEEEccc-hHHhhhCC
Q 041256 183 KVLESYK-GFEHVKKLVDVGGGLGITLNMIISK------YPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 183 ~~~~~~~-~~~~~~~vvDVGGG~G~~~~~l~~~------~P~l~~~v~Dl-p~vi~~a~ 233 (244)
.+++.+. +..+..+|||||+|+|.++..+.+. ++..+++.+|. ++.++.++
T Consensus 69 ~~l~~L~~~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~ 127 (223)
T d1r18a_ 69 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSK 127 (223)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHHhhccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHH
Confidence 3455541 2667789999999999988777664 56678888876 66666664
No 104
>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}
Probab=93.16 E-value=0.022 Score=42.77 Aligned_cols=39 Identities=15% Similarity=0.113 Sum_probs=33.0
Q ss_pred ceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 195 KKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 195 ~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.+|||++||+|.++.+.+.+... +++.+|. +.+++.+++
T Consensus 45 ~~vLDlfaGsG~~giealsrGa~-~v~~VE~~~~a~~~~k~ 84 (183)
T d2fpoa1 45 AQCLDCFAGSGALGLEALSRYAA-GATLIEMDRAVSQQLIK 84 (183)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS-EEEEECSCHHHHHHHHH
T ss_pred hhhhhhhccccceeeeEEecCcc-eeEEEEEeechhhHHHH
Confidence 68999999999999999998876 7888887 777776653
No 105
>d2bv6a1 a.4.5.28 (A:5-140) Transcriptional regulator MgrA {Staphylococcus aureus [TaxId: 1280]}
Probab=93.16 E-value=0.033 Score=39.47 Aligned_cols=61 Identities=13% Similarity=0.256 Sum_probs=44.9
Q ss_pred hcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCc---eeecCcccc
Q 041256 35 ELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR---LYSLAPVSA 105 (244)
Q Consensus 35 ~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~---~y~~t~~s~ 105 (244)
+..+...|... ++.|..+||+.++++ ... +.|+++-|+..|++++...+.++ ...+|+.+.
T Consensus 36 q~~vL~~i~~~---~~~t~~~la~~l~~~------~~~-~s~~l~~L~~~Gli~r~~~~~D~R~~~l~lT~~G~ 99 (136)
T d2bv6a1 36 QFLVLTILWDE---SPVNVKKVVTELALD------TGT-VSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSE 99 (136)
T ss_dssp HHHHHHHHHHS---SEEEHHHHHHHTTCC------TTT-HHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHH
T ss_pred HHHHHHHHHcC---CCCCHHHHHHHHCCC------HhH-HHHHHHHHHHCCCEEEeecCCcccchhhccCHHHH
Confidence 34466677775 589999999999997 456 99999999999999864322222 356666554
No 106
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=93.01 E-value=0.037 Score=36.65 Aligned_cols=57 Identities=14% Similarity=0.234 Sum_probs=44.4
Q ss_pred hhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeecCccccccc
Q 041256 39 FEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSLAPVSAYFV 108 (244)
Q Consensus 39 fd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~t~~s~~l~ 108 (244)
+|+|.... ++.+...|...++++ ... +...|..|...|++.+ . ++.|.+|+.+..|.
T Consensus 9 ~DIL~~~~--~g~~kT~i~~~aNLs------~~~-~~kyl~~L~~~GLI~~---~-~~~Y~iT~kG~~~L 65 (90)
T d1r7ja_ 9 QAILEACK--SGSPKTRIMYGANLS------YAL-TGRYIKMLMDLEIIRQ---E-GKQYMLTKKGEELL 65 (90)
T ss_dssp HHHHHHHT--TCBCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEE---E-TTEEEECHHHHHHH
T ss_pred HHHHHHHh--CCCCccHHHHHcCCC------HHH-HHHHHHHHHHCCCeee---c-CCEEEECccHHHHH
Confidence 44444332 346789999999997 567 9999999999999984 3 58899999987554
No 107
>d2hzta1 a.4.5.69 (A:4-98) Putative transcriptional regulator YtcD {Bacillus subtilis [TaxId: 1423]}
Probab=92.88 E-value=0.075 Score=35.42 Aligned_cols=53 Identities=17% Similarity=0.182 Sum_probs=40.3
Q ss_pred CCCCHHHHHHhC-CCCCCCCcchhccHHHHHHHHhhCCcccceeecC-C--ceeecCccccccc
Q 041256 49 AKLSVAEIVAQI-PLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDG-Q--RLYSLAPVSAYFV 108 (244)
Q Consensus 49 g~~t~~eLA~~~-~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~-~--~~y~~t~~s~~l~ 108 (244)
|+....||.+.+ |++ +.. |.+=|+.|...|++++..... + -.|++|+.+..|.
T Consensus 23 g~~rF~el~~~l~gis------~~~-Ls~rLk~Le~~glv~r~~~~~~p~~veY~LT~~G~~L~ 79 (95)
T d2hzta1 23 GKKRTSELKRLMPNIT------QKM-LTQQLRELEADGVINRIVYNQVPPKVEYELSEYGRSLE 79 (95)
T ss_dssp CCBCHHHHHHHCTTSC------HHH-HHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGGH
T ss_pred CCCCHHHHHHHhhcCC------hhH-HHHHHHHHHHhHHHhheeccccccchhhhhhhhHHHHH
Confidence 689999999998 887 556 999999999999998642111 1 1388888776554
No 108
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=92.69 E-value=0.045 Score=33.16 Aligned_cols=45 Identities=16% Similarity=0.287 Sum_probs=38.7
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccc
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALH 88 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~ 88 (244)
++..|...|.+. +.+|..|||+++|++ +.. +.+=++.|...|++.
T Consensus 4 ~D~~Il~~L~~n---~r~s~~eiA~~l~ls------~~~-v~~Ri~~L~~~giI~ 48 (60)
T d2cyya1 4 IDKKIIKILQND---GKAPLREISKITGLA------EST-IHERIRKLRESGVIK 48 (60)
T ss_dssp HHHHHHHHHHHC---TTCCHHHHHHHHCSC------HHH-HHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCcC------HHH-HHHHHHHHHHCCCeE
Confidence 456788889885 689999999999997 556 888999999999988
No 109
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.67 E-value=0.042 Score=33.37 Aligned_cols=44 Identities=16% Similarity=0.317 Sum_probs=37.6
Q ss_pred hcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccc
Q 041256 35 ELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALH 88 (244)
Q Consensus 35 ~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~ 88 (244)
+..|...|.+. +.+|..+||+++|++ +.. +.+=++.|...|++.
T Consensus 5 D~kIl~~L~~n---~r~s~~~lA~~~gls------~~~-v~~Ri~~L~~~giI~ 48 (60)
T d1i1ga1 5 DKIILEILEKD---ARTPFTEIAKKLGIS------ETA-VRKRVKALEEKGIIE 48 (60)
T ss_dssp HHHHHHHHHHC---TTCCHHHHHHHHTSC------HHH-HHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHc---CCCCHHHHHHHHCcC------HHH-HHHHHHHHHHCCCeE
Confidence 45677888885 689999999999997 556 888999999999987
No 110
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=92.62 E-value=0.057 Score=33.08 Aligned_cols=45 Identities=24% Similarity=0.460 Sum_probs=38.6
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccc
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALH 88 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~ 88 (244)
++..|.+.|.+. +.+|..+||+.+|++ +.- +.+=++-|...|++.
T Consensus 6 ~D~~IL~~L~~n---~r~s~~~iA~~lgis------~~t-v~~Ri~~L~~~giI~ 50 (63)
T d2cfxa1 6 IDLNIIEELKKD---SRLSMRELGRKIKLS------PPS-VTERVRQLESFGIIK 50 (63)
T ss_dssp HHHHHHHHHHHC---SCCCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCcC------HHH-HHHHHHHHHHCCCee
Confidence 355678889885 689999999999997 455 889999999999997
No 111
>d2fbha1 a.4.5.28 (A:8-144) Transcriptional regulator PA3341 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=92.47 E-value=0.048 Score=38.51 Aligned_cols=44 Identities=16% Similarity=0.174 Sum_probs=35.4
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
+.-.|...+ +++|..+||+.++++ ... +.++++-|+..|++++.
T Consensus 33 iL~~l~~~~--~~~t~~~la~~~~~~------~~~-vs~~v~~L~~~gli~r~ 76 (137)
T d2fbha1 33 VLLHLARHR--DSPTQRELAQSVGVE------GPT-LARLLDGLESQGLVRRL 76 (137)
T ss_dssp HHHHHHHCS--SCCBHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHcC--CCCcHHHHHHHHCCC------HHH-HHHHHHHHHHcCCcccc
Confidence 344555543 468999999999997 556 99999999999999964
No 112
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.34 E-value=0.013 Score=46.66 Aligned_cols=41 Identities=12% Similarity=0.060 Sum_probs=30.3
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 233 (244)
.+..+|+|||||.|.+..-.+.++.. +++..|. |..++.++
T Consensus 53 ~~g~~vLDiGcG~g~~~~~~~~~~~~-~v~~~D~S~~~i~~~~ 94 (263)
T d2g72a1 53 VSGRTLIDIGSGPTVYQLLSACSHFE-DITMTDFLEVNRQELG 94 (263)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCS-EEEEECSCHHHHHHHH
T ss_pred CCCcEEEEeccCCCHHHHHHhcccCC-eEEEEeCCHHHHHHHH
Confidence 45689999999999876544444433 6888898 77777664
No 113
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=92.14 E-value=0.051 Score=33.29 Aligned_cols=45 Identities=11% Similarity=0.200 Sum_probs=38.4
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccc
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALH 88 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~ 88 (244)
++..|...|.+. +..|..|||+++|++ +.. +.+=++.|...|++.
T Consensus 6 ~D~~IL~~L~~~---~r~s~~eiA~~l~ls------~~~-v~~Ri~rL~~~GiI~ 50 (63)
T d2cg4a1 6 LDRGILEALMGN---ARTAYAELAKQFGVS------PET-IHVRVEKMKQAGIIT 50 (63)
T ss_dssp HHHHHHHHHHHC---TTSCHHHHHHHHTSC------HHH-HHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHc---CCCCHHHHHHHHCcC------HHH-HHHHHHHHHHCCCeE
Confidence 355678888885 689999999999997 556 889999999999998
No 114
>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]}
Probab=92.13 E-value=0.14 Score=38.21 Aligned_cols=46 Identities=22% Similarity=0.216 Sum_probs=36.2
Q ss_pred HHHHhhcCCCCCcceEEEecCCccHHHHHHHHHC-CCCeEEEccchH
Q 041256 182 EKVLESYKGFEHVKKLVDVGGGLGITLNMIISKY-PHIKGINYDLPY 227 (244)
Q Consensus 182 ~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~v~Dlp~ 227 (244)
.++-+.|+-+....+|||+|++.|.++..+.++. +.-+.+.+|+-.
T Consensus 11 ~EI~~k~~l~k~~~~vlDLg~aPGgw~q~~~~~~~~~~~v~~vDl~~ 57 (180)
T d1ej0a_ 11 DEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP 57 (180)
T ss_dssp HHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHhCccCCCCeEEEEeccCCcceEEEEeeccccceEEEeeccc
Confidence 3566677756777899999999999999888764 446788888743
No 115
>d1jgsa_ a.4.5.28 (A:) Multiple antibiotic resistance repressor, MarR {Escherichia coli [TaxId: 562]}
Probab=92.12 E-value=0.05 Score=38.58 Aligned_cols=63 Identities=21% Similarity=0.174 Sum_probs=45.2
Q ss_pred hcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCc---eeecCcccccc
Q 041256 35 ELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR---LYSLAPVSAYF 107 (244)
Q Consensus 35 ~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~---~y~~t~~s~~l 107 (244)
+..+...|... ++.|..+||+.++++ ... +.+++..|...|++++.+...++ .+++|+.+..+
T Consensus 36 q~~vL~~l~~~---~~~t~~ela~~~~i~------~~~-vs~~v~~L~~~glv~r~~~~~D~R~~~i~lT~~G~~~ 101 (138)
T d1jgsa_ 36 QFKVLCSIRCA---ACITPVELKKVLSVD------LGA-LTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAI 101 (138)
T ss_dssp HHHHHHHHHHH---SSBCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEEECTTCSSCEEEEECHHHHHH
T ss_pred HHHHHHhHHhC---cCCCHHHHHHHHCCC------HhH-HHHHHHHHhhCCCEEEeeccCCCCeeEEEECHHHHHH
Confidence 34455566655 589999999999997 556 99999999999999864322233 36666655433
No 116
>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=91.91 E-value=0.058 Score=41.48 Aligned_cols=43 Identities=7% Similarity=0.068 Sum_probs=36.0
Q ss_pred CCcceEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYP-HIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~~ 234 (244)
.++++||+||+|.|..+..++++.| +-+++.+|. |+..+.|++
T Consensus 55 ~kpk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~ 99 (214)
T d2cl5a1 55 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQ 99 (214)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHH
T ss_pred hCCCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHH
Confidence 3568999999999999999999875 578999998 666776653
No 117
>d1z91a1 a.4.5.28 (A:8-144) Organic hydroperoxide resistance transcriptional regulator OhrR {Bacillus subtilis [TaxId: 1423]}
Probab=91.89 E-value=0.035 Score=39.35 Aligned_cols=61 Identities=15% Similarity=0.164 Sum_probs=45.0
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCce---eecCccccccc
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRL---YSLAPVSAYFV 108 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~---y~~t~~s~~l~ 108 (244)
+...|... +++|..+||+.++++ +.. +.|++.-|+..|++.+.+.+.+.+ ..+|+.+..+.
T Consensus 38 vL~~l~~~---~~~t~~~La~~~~i~------~~~-vsr~i~~L~~~glv~r~~~~~D~R~~~i~lT~~G~~~~ 101 (137)
T d1z91a1 38 ALLLLWEH---ETLTVKKMGEQLYLD------SGT-LTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLK 101 (137)
T ss_dssp HHHHHHHH---SEEEHHHHHHTTTCC------HHH-HHHHHHHHHHHTSEECCBCSSCTTSBEEEECHHHHSGG
T ss_pred HHHHHHcC---CCCCHHHHHHHHCcC------HHH-HHHHHHHHhhccceEEeecCCCCCeEEEEECHHHHHHH
Confidence 45566654 589999999999997 456 999999999999998643222333 67777765443
No 118
>d2gxba1 a.4.5.19 (A:140-198) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.69 E-value=0.14 Score=30.50 Aligned_cols=43 Identities=16% Similarity=0.262 Sum_probs=34.3
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
.+..|.+ ....|+.+||.+++++ ... +.|+|..|...|.+.+.
T Consensus 7 ~l~~lg~---~~~~tA~~LA~kl~vp------Kk~-iNr~LYsL~~kgkl~k~ 49 (59)
T d2gxba1 7 FLEELGE---GKATTAHDLSGKLGTP------KKE-INRVLYSLAKKGKLQKE 49 (59)
T ss_dssp HHHHHCT---TCCBCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEE
T ss_pred HHHhcCC---ccchhHHHHHHHhCCc------HHH-HHHHHHHHHHccchhhc
Confidence 3444544 3689999999999995 345 99999999999999863
No 119
>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]}
Probab=91.59 E-value=0.057 Score=42.36 Aligned_cols=35 Identities=31% Similarity=0.488 Sum_probs=31.3
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL 225 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 225 (244)
++...+++|||.|.|.=++-++=.+|+++.+++|-
T Consensus 68 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~v~Lves 102 (239)
T d1xdza_ 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDS 102 (239)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEES
T ss_pred ccCCCeEEeecCCCchHHHHHHHhCCCccceeecc
Confidence 45668999999999999888888999999999994
No 120
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=91.45 E-value=0.13 Score=38.80 Aligned_cols=46 Identities=7% Similarity=0.086 Sum_probs=33.9
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHHCCC-CeEEEccc-hHHhh
Q 041256 184 VLESYKGFEHVKKLVDVGGGLGITLNMIISKYPH-IKGINYDL-PYVIK 230 (244)
Q Consensus 184 ~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~-l~~~v~Dl-p~vi~ 230 (244)
+++... .....+|+|.|||+|.++.++.++++. .+...+|+ |..+.
T Consensus 11 m~~l~~-~~~~~~IlDp~~G~G~fl~~~~~~~~~~~~i~g~ei~~~~~~ 58 (223)
T d2ih2a1 11 MVSLAE-APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALD 58 (223)
T ss_dssp HHHHCC-CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCC
T ss_pred HHHhcC-CCCcCEEEECCCchHHHHHHHHHhccccceEEeeecCHHHHh
Confidence 444444 455689999999999999999988776 45777787 44333
No 121
>d2frha1 a.4.5.28 (A:102-216) Pleiotropic regulator of virulence genes, SarA {Staphylococcus aureus [TaxId: 1280]}
Probab=91.31 E-value=0.068 Score=36.77 Aligned_cols=60 Identities=12% Similarity=0.182 Sum_probs=42.3
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCc---eeecCcccc
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR---LYSLAPVSA 105 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~---~y~~t~~s~ 105 (244)
+...|...+ ++++|..+||+.++++ ... +.++++.|...|++.+.+.+.+. .+.+|+.++
T Consensus 38 vL~~l~~~~-~~~~t~~~la~~l~~~------~~t-vs~~i~~Le~~gli~r~~~~~D~R~~~i~LT~~G~ 100 (115)
T d2frha1 38 VLTYISENK-EKEYYLKDIINHLNYK------QPQ-VVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQR 100 (115)
T ss_dssp HHHHHHHTC-CSEEEHHHHHHHSSSH------HHH-HHHHHHHHHHTTSSCCBCCSSSSCCCEEECCSHHH
T ss_pred HHHHHHcCC-CCCCCHHHHHHHHCCC------HhH-HHHHHHHHHhhhhheeeecccCCceEEEEECHHHH
Confidence 344555542 2579999999999997 456 99999999999999964322222 256666554
No 122
>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}
Probab=91.29 E-value=0.093 Score=39.13 Aligned_cols=41 Identities=17% Similarity=0.005 Sum_probs=33.4
Q ss_pred CcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 193 HVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 193 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
...+|||+.+|+|.++.+.+.+... +++.+|. +.+++.+++
T Consensus 41 ~~~~vLDlfaGsG~~g~ea~srGa~-~v~~ve~~~~a~~~~~~ 82 (182)
T d2fhpa1 41 DGGMALDLYSGSGGLAIEAVSRGMD-KSICIEKNFAALKVIKE 82 (182)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHH
T ss_pred CCCEEEEcccccccccceeeecchh-HHHHHHHHHHHHHHHHH
Confidence 4589999999999999999998755 6777887 777777653
No 123
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA {Salmonella typhimurium [TaxId: 90371]}
Probab=90.87 E-value=0.091 Score=37.08 Aligned_cols=62 Identities=15% Similarity=0.135 Sum_probs=42.2
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCc---eeecCccccccc
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR---LYSLAPVSAYFV 108 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~---~y~~t~~s~~l~ 108 (244)
+.-.|...+ +++|..+||+.++++ ... +.++++-|...|++++.+.+.++ .+.+|+.+..+.
T Consensus 36 ~L~~l~~~~--~~~t~~~la~~l~i~------~~~-vs~~l~~L~~~glI~~~~~~~D~R~~~l~lT~~G~~~~ 100 (140)
T d3deua1 36 TLHNIHQLP--PDQSQIQLAKAIGIE------QPS-LVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLI 100 (140)
T ss_dssp HHHHHHHSC--SSEEHHHHHHHHTSC------HHH-HHHHHHHHHHTTSEEEC--------CEEEECGGGHHHH
T ss_pred HHHHHHHcC--CCccHHHHHHHHCCC------HhH-HHHHHHHHHhCCCEEecccCCCCCceeeEECHHHHHHH
Confidence 445555432 479999999999997 456 99999999999999853222222 467777665433
No 124
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=90.82 E-value=0.16 Score=35.56 Aligned_cols=60 Identities=12% Similarity=0.097 Sum_probs=44.0
Q ss_pred cChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCc---eeecCcccc
Q 041256 36 LDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR---LYSLAPVSA 105 (244)
Q Consensus 36 lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~---~y~~t~~s~ 105 (244)
..+...|... ++.|..+||+.++++ ... +.++++-|...|++++.+...++ ...+|+.+.
T Consensus 33 ~~vL~~l~~~---~~~t~~~la~~~~i~------~~~-vs~~i~~L~~~gli~r~~~~~D~R~~~l~lT~~G~ 95 (136)
T d2fbia1 33 WRVIRILRQQ---GEMESYQLANQACIL------RPS-MTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQ 95 (136)
T ss_dssp HHHHHHHHHH---CSEEHHHHHHHTTCC------HHH-HHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHH
T ss_pred HHHHHHHHHc---CCCCHHHHHHHHCCC------HHH-HHHHHHHHHHCCCEEEeecCccCchhhhccCHHHH
Confidence 3455666665 689999999999997 556 99999999999999864322222 255666554
No 125
>d1hsja1 a.4.5.28 (A:373-487) Staphylococcal accessory regulator A homolog, SarR {Staphylococcus aureus [TaxId: 1280]}
Probab=90.73 E-value=0.087 Score=36.21 Aligned_cols=46 Identities=20% Similarity=0.218 Sum_probs=35.7
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccccee
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSF 91 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~ 91 (244)
+...|...+ ++++|..+||+.++++ ... +.+++.-|...|++.+..
T Consensus 37 vL~~l~~~~-~~~~t~~ela~~l~~~------~~~-vs~~i~~Le~~gli~r~~ 82 (115)
T d1hsja1 37 ILNHILRSE-SNEISSKEIAKCSEFK------PYY-LTKALQKLKDLKLLSKKR 82 (115)
T ss_dssp HHHHHHTCS-CSEEEHHHHHHSSCCC------HHH-HHHHHHHHHTTTTSCCEE
T ss_pred HHHHHHccC-CCCcCHHHHHHHHCCC------hhh-HHHHHHHHHHcCCeEEEe
Confidence 444454321 2589999999999997 456 999999999999999743
No 126
>d1lj9a_ a.4.5.28 (A:) Transcriptional regulator SlyA {Enterococcus faecalis [TaxId: 1351]}
Probab=90.50 E-value=0.11 Score=37.05 Aligned_cols=43 Identities=9% Similarity=0.096 Sum_probs=35.7
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
+...|.+. +++|..+||+.++++ +.. +.++++-|...|++++.
T Consensus 34 iL~~i~~~---~~~t~~~la~~l~i~------~~t-vs~~l~~L~~~glI~r~ 76 (144)
T d1lj9a_ 34 YLVRVCEN---PGIIQEKIAELIKVD------RTT-AARAIKRLEEQGFIYRQ 76 (144)
T ss_dssp HHHHHHHS---TTEEHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEE
T ss_pred HHHHHHhC---CCCCHHHHHHHHCcc------Hhh-HHHHHHHHHhhhccccc
Confidence 44456664 579999999999997 556 99999999999999864
No 127
>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}
Probab=90.45 E-value=0.12 Score=39.50 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=29.4
Q ss_pred cceEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 041256 194 VKKLVDVGGGLGITLNMIISKYPHIKGINYDL 225 (244)
Q Consensus 194 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 225 (244)
..+++|||.|.|.=++-++-.+|+++.+++|-
T Consensus 66 ~~~ilDiGsGaG~PGi~laI~~p~~~~~Lves 97 (207)
T d1jsxa_ 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDS 97 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEES
T ss_pred CCceeeeeccCCceeeehhhhcccceEEEEec
Confidence 46899999999999888888999999999995
No 128
>d1j75a_ a.4.5.19 (A:) Dlm-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.44 E-value=0.1 Score=30.45 Aligned_cols=54 Identities=17% Similarity=0.351 Sum_probs=43.3
Q ss_pred hcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeec
Q 041256 35 ELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSL 100 (244)
Q Consensus 35 ~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~ 100 (244)
|-.|...|.+.| .|....+|+++++++ ... +.++|..|-..+=+.. .++.+|++
T Consensus 3 EQkILQVL~dag--spvk~~ql~k~cqVp------kk~-lNqVL~rlkke~kVsl---~~patW~l 56 (57)
T d1j75a_ 3 EQKILQVLSDDG--GPVKIGQLVKKCQVP------KKT-LNQVLYRLKKEDRVSS---PEPATWSI 56 (57)
T ss_dssp HHHHHHHHHHHC--SCEEHHHHHHHHCSC------HHH-HHHHHHHHHHTTSEEE---EETTEEEE
T ss_pred HHHHHHHHHhcC--CchHHHHHHHHHCCC------HHH-HHHHHHHHHhcccccc---CCCccccC
Confidence 456888899887 799999999999995 334 9999999998888774 34677765
No 129
>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=89.83 E-value=0.085 Score=43.11 Aligned_cols=42 Identities=19% Similarity=0.045 Sum_probs=35.7
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
++..+|+|+|||+|.+++.+++.... +++..|+ |..++.+++
T Consensus 144 ~~g~~VLDl~~g~G~~si~~a~~ga~-~V~~vD~s~~al~~a~~ 186 (324)
T d2as0a2 144 QPGDRVLDVFTYTGGFAIHAAIAGAD-EVIGIDKSPRAIETAKE 186 (324)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCS-EEEEEESCHHHHHHHHH
T ss_pred CCCCeeecccCcccchhhhhhhcCCc-EEEeecCCHHHHHHHHH
Confidence 45689999999999999999988653 7899998 888888865
No 130
>d1q1ha_ a.4.5.41 (A:) Transcription factor E/IIe-alpha, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=89.59 E-value=0.2 Score=32.62 Aligned_cols=45 Identities=24% Similarity=0.374 Sum_probs=37.2
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
.|++.|.+.+ +-.|=++||+.+|+. ... ++++|..|...|+++..
T Consensus 22 ~v~~~L~~~~--~evtDe~iA~~tgi~------in~-VRk~Ly~L~~~~L~~y~ 66 (88)
T d1q1ha_ 22 DVLRILLDKG--TEMTDEEIANQLNIK------VND-VRKKLNLLEEQGFVSYR 66 (88)
T ss_dssp HHHHHHHHHC--SCBCHHHHHHTTTSC------HHH-HHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHhcc--CcCCHHHHHHHhCCc------HHH-HHHHHHHHHhCCceEEE
Confidence 4788776542 479999999999997 556 99999999999999753
No 131
>d2fswa1 a.4.5.69 (A:3-104) Hypothetical protein PG0823 {Porphyromonas gingivalis [TaxId: 837]}
Probab=89.44 E-value=0.12 Score=34.78 Aligned_cols=76 Identities=16% Similarity=0.187 Sum_probs=53.9
Q ss_pred hHHHHHHHHhhhHHHHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhC-CCCCCCCcchhccHHHHHHHHhhCCccccee
Q 041256 13 NFSYAMELASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQI-PLKDNNPEAAAMTLDRVLRLLVSYNALHCSF 91 (244)
Q Consensus 13 ~~~~l~~~~~g~~~~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~-~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~ 91 (244)
+....++++-+-|....|.. |.. |+....||.+.+ |++ +.. |.+=|+.|...|++.+..
T Consensus 9 pv~~~l~ilg~kW~l~Il~~---------L~~----g~~rF~el~~~l~gIs------~~~-Ls~rLkeL~~~glv~r~~ 68 (102)
T d2fswa1 9 PVRKSMQIFAGKWTLLIIFQ---------INR----RIIRYGELKRAIPGIS------EKM-LIDELKFLCGKGLIKKKQ 68 (102)
T ss_dssp HHHHHHHHHTSSSHHHHHHH---------HTT----SCEEHHHHHHHSTTCC------HHH-HHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHcCCCHHHHHHH---------Hcc----CCCCHHHHHhhCcccc------hhH-HHHHHHHHHHCCceeecc
Confidence 46667777777776655443 333 689999999998 787 556 899999999999998642
Q ss_pred ecC-C--ceeecCccccccc
Q 041256 92 VDG-Q--RLYSLAPVSAYFV 108 (244)
Q Consensus 92 ~~~-~--~~y~~t~~s~~l~ 108 (244)
... + -.|++|+.+..|.
T Consensus 69 ~~~~p~~veY~LT~~G~~L~ 88 (102)
T d2fswa1 69 YPEVPPRVEYSLTPLGEKVL 88 (102)
T ss_dssp ECSSSCEEEEEECHHHHTTH
T ss_pred cCCCCCeehhhhhHhHHHHH
Confidence 111 1 1389988876554
No 132
>d2fxaa1 a.4.5.28 (A:6-167) Protease production regulatory protein Hpr {Bacillus subtilis [TaxId: 1423]}
Probab=89.27 E-value=0.39 Score=34.87 Aligned_cols=58 Identities=14% Similarity=0.023 Sum_probs=42.0
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCc---eeecCcccc
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR---LYSLAPVSA 105 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~---~y~~t~~s~ 105 (244)
+...|... +++|..+||+.++++ ... +.++++-|...|++++.....+. ...+|+.+.
T Consensus 46 vL~~l~~~---~~~t~~~la~~~~l~------~~t-vs~~i~rL~~~gli~r~~~~~D~R~~~l~lT~~G~ 106 (162)
T d2fxaa1 46 ILWIAYQL---NGASISEIAKFGVMH------VST-AFNFSKKLEERGYLRFSKRLNDKRNTYVQLTEEGT 106 (162)
T ss_dssp HHHHHHHH---TSEEHHHHHHHTTCC------HHH-HHHHHHHHHHHTSEEEECC------CEEEECHHHH
T ss_pred HHhhhccC---CCcCHHHHHHHHcCC------chh-hHHHHHHHHHCCCceeecccccCeeeeeccCHhHH
Confidence 66677665 589999999999997 456 99999999999999963211122 355566554
No 133
>d2fbka1 a.4.5.28 (A:8-179) Transcriptional regulator DR1159 {Deinococcus radiodurans [TaxId: 1299]}
Probab=89.21 E-value=0.056 Score=40.00 Aligned_cols=46 Identities=11% Similarity=0.155 Sum_probs=35.6
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
|.-.|...++++++|..+||+.++++ ... +.++++-|...|++++.
T Consensus 67 vL~~L~~~~~~~~lt~~eLa~~l~i~------~~t-vsr~l~~Le~~GlV~r~ 112 (172)
T d2fbka1 67 LLLTLYRSAPPEGLRPTELSALAAIS------GPS-TSNRIVRLLEKGLIERR 112 (172)
T ss_dssp HHHHHHHHCCSSCBCHHHHHHHCSCC------SGG-GSSHHHHHHHHTSEECC
T ss_pred HHHHHHhhCCCCCcCHHHHHHHHCcC------HhH-HHHHHHHHHhCCCeeee
Confidence 44555544433458999999999997 445 88999999999999963
No 134
>d1xmka1 a.4.5.19 (A:294-366) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.20 E-value=0.15 Score=32.11 Aligned_cols=61 Identities=11% Similarity=0.123 Sum_probs=47.1
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeecCccc
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSLAPVS 104 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~t~~s 104 (244)
.+..|.+.|... |+.|+-.||+.+|++ . ..- +.+.|..|...|-+.+... .+-.|.++...
T Consensus 6 ~eekI~~~L~~~---g~~~Al~iak~lGl~----k-ake-VN~~LY~L~k~g~v~k~~~-tPP~W~L~~~~ 66 (73)
T d1xmka1 6 IKEKICDYLFNV---SDSSALNLAKNIGLT----K-ARD-INAVLIDMERQGDVYRQGT-TPPIWHLTDKK 66 (73)
T ss_dssp HHHHHHHHHHHT---CCEEHHHHHHHHCGG----G-HHH-HHHHHHHHHHTTSEEEECS-SSCEEEECHHH
T ss_pred HHHHHHHHHHHc---CCchHHHHHHHhCCC----c-HHH-HhHHHHHHHHCCCeecCCC-CCCceeeecch
Confidence 456788899886 689999999999995 2 124 8999999999999986432 25678887654
No 135
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=89.08 E-value=0.27 Score=30.64 Aligned_cols=35 Identities=14% Similarity=0.218 Sum_probs=30.6
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
-|-|+.|||+.+|+. . +.. +.+.|..|...|++.+
T Consensus 23 ~~Ps~rei~~~~g~~---S--~st-v~~~l~~Le~kG~I~r 57 (71)
T d1jhfa1 23 MPPTRAEIAQRLGFR---S--PNA-AEEHLKALARKGVIEI 57 (71)
T ss_dssp SCCCHHHHHHHTTCS---S--HHH-HHHHHHHHHHTTSEEE
T ss_pred CCCCHHHHHHHcCCC---C--HHH-HHHHHHHHHHCcCeec
Confidence 588999999999984 1 455 9999999999999995
No 136
>d1z7ua1 a.4.5.69 (A:1-108) Hypothetical protein EF0647 {Enterococcus faecalis [TaxId: 1351]}
Probab=88.92 E-value=0.15 Score=34.77 Aligned_cols=76 Identities=13% Similarity=0.156 Sum_probs=51.6
Q ss_pred hHHHHHHHHhhhHHHHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhC-CCCCCCCcchhccHHHHHHHHhhCCccccee
Q 041256 13 NFSYAMELASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQI-PLKDNNPEAAAMTLDRVLRLLVSYNALHCSF 91 (244)
Q Consensus 13 ~~~~l~~~~~g~~~~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~-~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~ 91 (244)
+....++++-+-|....|. .|.. |+....||.+.+ |++ +.. |.+=|+.|...|++.+..
T Consensus 8 ~i~~al~iig~kW~~~Il~---------~L~~----g~~RF~el~~~l~gIS------~~~-Ls~rLk~L~~~glv~R~~ 67 (108)
T d1z7ua1 8 SINLALSTINGKWKLSLMD---------ELFQ----GTKRNGELMRALDGIT------QRV-LTDRLREMEKDGLVHRES 67 (108)
T ss_dssp HHHHHHHTTCSTTHHHHHH---------HHHH----SCBCHHHHHHHSTTCC------HHH-HHHHHHHHHHHTSEEEEE
T ss_pred cHHHHHHHHcCCCHHHHHH---------HHHc----CCCCHHHHHHHCcCCC------hhH-HHHHHHHHHHCCcceeec
Confidence 3444555555555555443 4544 689999999998 687 556 999999999999998632
Q ss_pred ecC-C--ceeecCccccccc
Q 041256 92 VDG-Q--RLYSLAPVSAYFV 108 (244)
Q Consensus 92 ~~~-~--~~y~~t~~s~~l~ 108 (244)
... + -.|++|+.+..|.
T Consensus 68 ~~~~p~~veY~LT~~G~~L~ 87 (108)
T d1z7ua1 68 FNELPPRVEYTLTPEGYALY 87 (108)
T ss_dssp ECCSSCEEEEEECHHHHHHH
T ss_pred cCCCcceehhhhchhHHHHH
Confidence 111 1 1388888876554
No 137
>d1p4xa2 a.4.5.28 (A:126-250) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=88.50 E-value=0.13 Score=35.81 Aligned_cols=61 Identities=15% Similarity=0.132 Sum_probs=42.6
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCc---eeecCcccc
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR---LYSLAPVSA 105 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~---~y~~t~~s~ 105 (244)
.+...|...+ ++++|..+||+.++++ ... +.++++-|...|++.+..-..+. ...+|+.++
T Consensus 37 ~vL~~l~~~~-~~~~~~~~ia~~l~~~------~~~-vs~~v~~L~~~glV~r~~~~~D~R~v~i~LT~~G~ 100 (125)
T d1p4xa2 37 TILAIITSQN-KNIVLLKDLIETIHHK------YPQ-TVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQ 100 (125)
T ss_dssp HHHHHHHTTT-TCCEEHHHHHHHSSSC------HHH-HHHHHHHHHHHTSSEEEECSSSTTCEEEECCHHHH
T ss_pred HHHHHHHHcc-CCCccHHHHHHHHCCC------cch-HHHHHHHHHhccCEeeeecCCCCCeEEEEECHHHH
Confidence 3566665432 2578999999999997 456 99999999999999864322222 255555544
No 138
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.44 E-value=0.16 Score=39.06 Aligned_cols=44 Identities=14% Similarity=0.131 Sum_probs=36.8
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHhhhCCC
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYP-HIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~~ 234 (244)
..++++||+||++.|.-+..+++.-| +-+.+.+|. |+..+.|++
T Consensus 57 ~~~~k~vLEiGt~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~ 102 (219)
T d2avda1 57 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRP 102 (219)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHH
T ss_pred ccCCCeEEEEechhhHHHHHHHHhCCCCceEEEEeechhHHHHHHH
Confidence 35679999999999999999999987 678888887 677666653
No 139
>d1yyva1 a.4.5.69 (A:9-122) Putative transcriptional regulator YtfH {Salmonella typhimurium [TaxId: 90371]}
Probab=88.34 E-value=0.11 Score=35.70 Aligned_cols=76 Identities=13% Similarity=0.106 Sum_probs=54.7
Q ss_pred hHHHHHHHHhhhHHHHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhC-CCCCCCCcchhccHHHHHHHHhhCCccccee
Q 041256 13 NFSYAMELASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQI-PLKDNNPEAAAMTLDRVLRLLVSYNALHCSF 91 (244)
Q Consensus 13 ~~~~l~~~~~g~~~~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~-~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~ 91 (244)
+....++++.+-|....|.. |.. |+....||.+.+ |++ +.. |.+=|+.|...|++.+..
T Consensus 13 pv~~~l~~ig~kW~l~Il~~---------L~~----g~~RF~el~~~l~gis------~~~-Ls~rL~~Le~~glv~R~~ 72 (114)
T d1yyva1 13 PSREVLKHVTSRWGVLILVA---------LRD----GTHRFSDLRRKMGGVS------EKM-LAQSLQALEQDGFLNRVS 72 (114)
T ss_dssp THHHHHHHHHSHHHHHHHHH---------GGG----CCEEHHHHHHHSTTCC------HHH-HHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHcCCCHHHHHHH---------Hhc----CCCCHHHHHHHccccc------hhH-HHHHHHHHHHHHHHhhcc
Confidence 35667777777777666543 334 688999999999 786 456 899999999999998642
Q ss_pred ecC-C--ceeecCccccccc
Q 041256 92 VDG-Q--RLYSLAPVSAYFV 108 (244)
Q Consensus 92 ~~~-~--~~y~~t~~s~~l~ 108 (244)
... + -.|++|+.+..|.
T Consensus 73 ~~~~p~~veY~LT~~G~~L~ 92 (114)
T d1yyva1 73 YPVVPPHVEYSLTPLGEQVS 92 (114)
T ss_dssp ECSSSCEEEEEECHHHHHHH
T ss_pred cCCCCchhHhHhhHhHHHHH
Confidence 111 1 2388888876554
No 140
>d2ev0a1 a.4.5.24 (A:2-62) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=88.30 E-value=0.26 Score=29.77 Aligned_cols=34 Identities=12% Similarity=0.191 Sum_probs=30.7
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
++.+..+||+.+|++ +.- +...++-|...|+++.
T Consensus 20 ~~v~~~~iA~~L~vs------~~S-Vs~mikrL~~~GlV~~ 53 (61)
T d2ev0a1 20 GYARVSDIAEALAVH------PSS-VTKMVQKLDKDEYLIY 53 (61)
T ss_dssp SSCCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEC
T ss_pred CCccHHHHHHHhCCC------chh-HHHHHHHHHHCCCEEE
Confidence 689999999999997 445 8999999999999996
No 141
>d2f2ea1 a.4.5.69 (A:5-146) Hypothetical protein PA1607 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=88.19 E-value=0.29 Score=34.92 Aligned_cols=73 Identities=12% Similarity=0.104 Sum_probs=49.2
Q ss_pred HHHHHHhhhHHHHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCC
Q 041256 16 YAMELASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQ 95 (244)
Q Consensus 16 ~l~~~~~g~~~~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~ 95 (244)
..++++-.-|....|.. |.. |+....||.+.+|++ +.. |.+=|+.|...|++.+.....+
T Consensus 12 ~~l~ilg~kW~l~Il~~---------l~~----G~~rf~el~~~lgis------~~v-Ls~rL~~L~~~gLv~r~~~~~p 71 (142)
T d2f2ea1 12 RPLDVIGDGWSMLIVRD---------AFE----GLTRFGEFQKSLGLA------KNI-LAARLRNLVEHGVMVAVPAESG 71 (142)
T ss_dssp TTHHHHCSSSHHHHHHH---------HHT----TCCSHHHHHHHHCCC------HHH-HHHHHHHHHHTTSEEEEECSSS
T ss_pred HHHHHHcCCCHHHHHHH---------HHc----CCCCHHHHHHHhhcc------HHH-HHHHHHHHHHhcceeeecCCCC
Confidence 34445555555555444 223 699999999999997 456 8888999999999985211111
Q ss_pred --ceeecCccccccc
Q 041256 96 --RLYSLAPVSAYFV 108 (244)
Q Consensus 96 --~~y~~t~~s~~l~ 108 (244)
-.|++|+.+.-|.
T Consensus 72 ~r~~Y~LT~~G~~L~ 86 (142)
T d2f2ea1 72 SHQEYRLTDKGRALF 86 (142)
T ss_dssp SCEEEEECHHHHTTH
T ss_pred CeeEEecCcCcchHH
Confidence 2488888765443
No 142
>d1p4xa1 a.4.5.28 (A:1-125) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=88.18 E-value=0.17 Score=35.10 Aligned_cols=47 Identities=15% Similarity=0.185 Sum_probs=37.1
Q ss_pred cChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 36 LDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 36 lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
+-|...|...+ ++++|..|||+.++++ ... +.++++-|...|++.+.
T Consensus 37 ~~iL~~l~~~~-~~~~t~~eia~~~~~~------~~~-vs~~l~~L~~~g~v~r~ 83 (125)
T d1p4xa1 37 FILLTYLFHQQ-ENTLPFKKIVSDLCYK------QSD-LVQHIKVLVKHSYISKV 83 (125)
T ss_dssp HHHHHHHHSCS-CSEEEHHHHHHHSSSC------GGG-THHHHHHHHHTTSCEEE
T ss_pred HHHHHHHHHhc-cCCcCHHHHHHHhCCC------cch-HHHHHHHHHHCCCceee
Confidence 33555665543 2689999999999997 456 99999999999999864
No 143
>d3bwga1 a.4.5.6 (A:5-82) Transcriptional regulator YydK {Bacillus subtilis [TaxId: 1423]}
Probab=87.51 E-value=0.44 Score=30.03 Aligned_cols=43 Identities=23% Similarity=0.384 Sum_probs=34.6
Q ss_pred CCC-CHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeec
Q 041256 49 AKL-SVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSL 100 (244)
Q Consensus 49 g~~-t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~ 100 (244)
..+ |..+||+..+++ ..- +++-|+.|...|++.. ..+.|.|-.
T Consensus 20 ~~LPse~~La~~~~vS------r~t-vr~Al~~L~~~Gli~~--~~g~G~~V~ 63 (78)
T d3bwga1 20 DKLPVLETLMAQFEVS------KST-ITKSLELLEQKGAIFQ--VRGSGIFVR 63 (78)
T ss_dssp CBCCCHHHHHHHTTCC------HHH-HHHHHHHHHHTTSEEE--ETTTEEEEC
T ss_pred CCCcCHHHHHHHHCCC------HHH-HHHHHHHHHHCCcEEE--EcCcEEEEc
Confidence 466 899999999997 344 9999999999999996 345566654
No 144
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.22 E-value=0.29 Score=39.03 Aligned_cols=43 Identities=14% Similarity=0.321 Sum_probs=33.4
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEcc
Q 041256 181 MEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYD 224 (244)
Q Consensus 181 ~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~D 224 (244)
...+++... .....+|++||.|.|.+...|+++.+.+.++=.|
T Consensus 10 ~~kIv~~~~-~~~~d~VlEIGPG~G~LT~~Ll~~~~~v~aiE~D 52 (278)
T d1zq9a1 10 INSIIDKAA-LRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELD 52 (278)
T ss_dssp HHHHHHHTC-CCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESC
T ss_pred HHHHHHHhC-CCCCCEEEEECCCchHHHHHHHhcCCcEEEEEEc
Confidence 456666666 6667899999999999999999997755554444
No 145
>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}
Probab=87.18 E-value=0.15 Score=41.44 Aligned_cols=40 Identities=13% Similarity=-0.016 Sum_probs=32.8
Q ss_pred CcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 193 HVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 193 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
..++|+|++||+|.+++++++. .-+++..|. +..++.+++
T Consensus 145 ~g~rVLDl~~gtG~~s~~~a~g--~~~V~~vD~s~~al~~a~~ 185 (318)
T d1wxxa2 145 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEE 185 (318)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHH
T ss_pred CCCeeeccCCCCcHHHHHHHhc--CCcEEeecchHHHHHHHHH
Confidence 4589999999999999998764 346788898 888888764
No 146
>d2hs5a1 a.4.5.6 (A:25-93) Putative transcriptional regulator RHA1_ro03477 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=86.84 E-value=0.37 Score=29.70 Aligned_cols=43 Identities=14% Similarity=0.245 Sum_probs=34.3
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeec
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSL 100 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~ 100 (244)
..++..+||+..|++ ..- +++-|+.|...|+++. ..+.|.|-.
T Consensus 24 ~~l~~~~La~~~~vS------r~t-vr~Al~~L~~~Gli~~--~~~~G~~V~ 66 (69)
T d2hs5a1 24 ARLSEPDICAALDVS------RNT-VREAFQILIEDRLVAH--ELNRGVFVR 66 (69)
T ss_dssp CEECHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEE--ETTTEEEEC
T ss_pred CccCHHHHHHHHCCC------HHH-HHHHHHHHHHCCcEEE--EcCCEEEec
Confidence 467899999999997 345 9999999999999996 344565543
No 147
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=86.53 E-value=0.26 Score=38.65 Aligned_cols=50 Identities=12% Similarity=0.253 Sum_probs=36.1
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccchHHhhhC
Q 041256 181 MEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDLPYVIKDA 232 (244)
Q Consensus 181 ~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a 232 (244)
...+++... ..+...|+.||+|.|.+...|+++...+.++=.| +.-++..
T Consensus 10 ~~~Iv~~~~-~~~~d~vlEIGpG~G~LT~~Ll~~~~~v~aiEiD-~~l~~~L 59 (252)
T d1qyra_ 10 IDSIVSAIN-PQKGQAMVEIGPGLAALTEPVGERLDQLTVIELD-RDLAARL 59 (252)
T ss_dssp HHHHHHHHC-CCTTCCEEEECCTTTTTHHHHHTTCSCEEEECCC-HHHHHHH
T ss_pred HHHHHHhcC-CCCCCEEEEECCCchHHHHHHHccCCceEEEEec-cchhHHH
Confidence 456676666 6777899999999999999999987654444344 5544443
No 148
>d2isya1 a.4.5.24 (A:2-64) Iron-dependent regulator IdeR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=86.29 E-value=0.71 Score=27.90 Aligned_cols=34 Identities=9% Similarity=0.080 Sum_probs=30.7
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
++.+..+||+.+|++ +.- +.+.++-|...|++..
T Consensus 22 ~~v~~~~iA~~L~vs------~~S-Vt~mvkrL~~~Glv~~ 55 (63)
T d2isya1 22 VTPLRARIAERLDQS------GPT-VSQTVSRMERDGLLRV 55 (63)
T ss_dssp CCCCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEE
T ss_pred CCCcHHHHHHHhCCC------chh-HHHHHHHHHHCCCEEE
Confidence 689999999999997 445 8999999999999996
No 149
>d2p41a1 c.66.1.25 (A:8-264) An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 {Dengue virus 2 [TaxId: 11060]}
Probab=85.83 E-value=0.39 Score=37.57 Aligned_cols=42 Identities=17% Similarity=-0.057 Sum_probs=30.8
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL 225 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 225 (244)
.+.+.+- +....+|||+|||.|..+..+++..+..+...+++
T Consensus 57 ~~~~~~~-~~~~~~vvDlG~~pGgws~~~a~~~~v~~V~g~~i 98 (257)
T d2p41a1 57 WFVERNL-VTPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTK 98 (257)
T ss_dssp HHHHTTS-SCCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECC
T ss_pred HHHHhcC-ccCCCeEEEecCCCChHHHHHHhhcCCCceeEEEe
Confidence 4455553 66667899999999999999998876655444443
No 150
>d1hw1a1 a.4.5.6 (A:5-78) Fatty acid responsive transcription factor FadR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=83.96 E-value=0.62 Score=29.08 Aligned_cols=42 Identities=21% Similarity=0.173 Sum_probs=33.5
Q ss_pred CCC-CHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceee
Q 041256 49 AKL-SVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYS 99 (244)
Q Consensus 49 g~~-t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~ 99 (244)
..+ |..+||+.++++ ..- +++-++.|+..|++.. ..+.|.|-
T Consensus 25 ~~LPs~~eLa~~~~vS------r~t-vr~Al~~L~~~G~i~~--~~g~G~~V 67 (74)
T d1hw1a1 25 TILPAERELSELIGVT------RTT-LREVLQRLARDGWLTI--QHGKPTKV 67 (74)
T ss_dssp SBCCCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEE--ETTEEEEE
T ss_pred CCCccHHHHHHHHCCC------HHH-HHHHHHHHHHCCcEEE--EeCceEEE
Confidence 456 899999999997 344 9999999999999996 34445554
No 151
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]}
Probab=83.52 E-value=0.53 Score=37.84 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=32.5
Q ss_pred CCcceEEEecCCccHHHHHHHHH-----CCCCeEEEccc-hHHhhhCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISK-----YPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~-----~P~l~~~v~Dl-p~vi~~a~ 233 (244)
....+|+|.+||+|.++.++.++ .++.+.+.+|. |..+..|+
T Consensus 116 ~~~~~vlDp~~GsG~~l~~~~~~l~~~~~~~~~~~g~di~~~~~~~a~ 163 (328)
T d2f8la1 116 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLAL 163 (328)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHH
T ss_pred CCCCEEEeCCCCcchhHHHHHHHHHhccCccceEEEecccHHHHHHHH
Confidence 45689999999999999998764 45567788898 66666553
No 152
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=83.12 E-value=0.69 Score=26.68 Aligned_cols=42 Identities=12% Similarity=0.116 Sum_probs=31.5
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcc
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNAL 87 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll 87 (244)
+.+.|.+.- +.++|+++||+.+|++ +.. +.|+.+......+.
T Consensus 8 v~~yI~~~~-~~~~tl~~lA~~~~~s------~~~-l~r~Fk~~~g~tp~ 49 (54)
T d1bl0a1 8 ILDWIEDNL-ESPLSLEKVSERSGYS------KWH-LQRMFKKETGHSLG 49 (54)
T ss_dssp HHHHHHTTT-TSCCCCHHHHHHSSSC------HHH-HHHHHHHHHSSCHH
T ss_pred HHHHHHhcc-CCCCCHHHHHHHHCcC------HHH-HHHHHHHHHCcCHH
Confidence 445565553 2689999999999997 667 99998887765543
No 153
>d1sfua_ a.4.5.19 (A:) 34L {Yaba-like disease virus, YLDV [TaxId: 132475]}
Probab=83.06 E-value=1.5 Score=26.93 Aligned_cols=36 Identities=6% Similarity=0.119 Sum_probs=31.2
Q ss_pred CCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 48 GAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 48 ~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
+..+|+.+||+.+|++ ... +-|.|.-|...|.+.+.
T Consensus 22 ~~~~tA~~LAk~Lg~~------Kk~-VNr~LY~L~~~G~v~~~ 57 (70)
T d1sfua_ 22 NDYTTAISLSNRLKIN------KKK-INQQLYKLQKEDTVKMV 57 (70)
T ss_dssp TCEECHHHHHHHTTCC------HHH-HHHHHHHHHHTTSEEEE
T ss_pred CCCchHHHHHHHhCCC------HHH-HHHHHHHHHHCCCeecC
Confidence 4689999999999996 345 99999999999999863
No 154
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=81.64 E-value=0.47 Score=36.49 Aligned_cols=43 Identities=16% Similarity=0.091 Sum_probs=36.1
Q ss_pred CCcceEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHhhhCCC
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYP-HIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~~ 234 (244)
.++++||+||.+.|.-+..+++..| +-+.+.+|. |+.++.|++
T Consensus 58 ~~~k~iLEiGT~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~ 102 (227)
T d1susa1 58 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLP 102 (227)
T ss_dssp HTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHH
T ss_pred cCCCcEEEecchhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHH
Confidence 4679999999999999999999987 578888887 776666654
No 155
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=81.53 E-value=0.47 Score=38.28 Aligned_cols=42 Identities=14% Similarity=0.027 Sum_probs=35.0
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.++.++|||+.||+|.++..+++.. .+++.+|. +..++.|++
T Consensus 130 ~~~~~rVLdlf~~tG~~sl~aa~~G--A~V~~VD~s~~al~~a~~ 172 (309)
T d2igta1 130 ADRPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKE 172 (309)
T ss_dssp SSSCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHH
T ss_pred ccCCCeEEEecCCCcHHHHHHHhCC--CeEEEEeChHHHHHHHHH
Confidence 4566899999999999999988764 57889998 788888864
No 156
>d1nd9a_ a.6.1.6 (A:) N-terminal subdomain of bacterial translation initiation factor IF2 {Escherichia coli [TaxId: 562]}
Probab=80.02 E-value=0.32 Score=28.02 Aligned_cols=28 Identities=7% Similarity=0.242 Sum_probs=24.7
Q ss_pred CCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccc
Q 041256 51 LSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALH 88 (244)
Q Consensus 51 ~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~ 88 (244)
+|++++|+.+|.+ ..|||..|...|+-.
T Consensus 3 vTVk~lA~~v~~~----------vd~Ll~Ql~~AGl~k 30 (49)
T d1nd9a_ 3 VTIKTLAAERQTS----------VERLVQQFADAGIRK 30 (49)
T ss_dssp ECTTHHHHHHSSS----------HHHHHHHHHHHTSCC
T ss_pred ccHHHHHHHHCcC----------HHHHHHHHHHcCCCC
Confidence 6899999999996 778999999999843
No 157
>d1cf7a_ a.4.5.17 (A:) Cell cycle transcription factor E2F-4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.39 E-value=0.61 Score=28.65 Aligned_cols=43 Identities=7% Similarity=0.151 Sum_probs=33.9
Q ss_pred hHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 40 EIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 40 d~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
..+.+.+ ++..++.+.|+.++.. + .++ ++.+..+|.+.|++++
T Consensus 16 ~l~~~~~-~~~~~L~~aa~~L~v~---~--kRR-iYDI~NVLe~igli~K 58 (67)
T d1cf7a_ 16 SLLQEAK-DGVLDLKLAADTLAVR---Q--KRR-IYDITNVLEGIGLIEK 58 (67)
T ss_dssp HHHHHSS-TTEEEHHHHHHHTTTC---C--THH-HHHHHHHHHHHTSEEE
T ss_pred HHHhhCC-CCeeeHHHHHHHhcCc---c--hhh-HHHHHHHHhhhhhhhc
Confidence 3444433 3678999999999984 2 356 9999999999999995
No 158
>d2obpa1 a.4.5.71 (A:12-92) Putative DNA-binding protein ReutB4095 {Ralstonia eutropha [TaxId: 106590]}
Probab=79.34 E-value=0.9 Score=28.43 Aligned_cols=51 Identities=27% Similarity=0.304 Sum_probs=38.6
Q ss_pred CCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccccee-ecCCceeecCcccc
Q 041256 48 GAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSF-VDGQRLYSLAPVSA 105 (244)
Q Consensus 48 ~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~-~~~~~~y~~t~~s~ 105 (244)
+++-|++.|+++.+++ -+. |+|.|-.|.+.|+.+-.- +++.|.=++|+.++
T Consensus 22 g~~WSLaklsKra~~P------MS~-LRR~LTqL~~aGl~~t~~~edG~G~A~Lt~~G~ 73 (81)
T d2obpa1 22 ATPWSLPKIAKRAQLP------MSV-LRRVLTQLQAAGLADVSVEADGRGHASLTQEGA 73 (81)
T ss_dssp CCCCBHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEEEECTTSCEEEEECHHHH
T ss_pred CCCccHHHHHhhcCCc------HHH-HHHHHHHHhhcCceeeeeccCCcceeeccHHHH
Confidence 3689999999999996 456 999999999999986321 23345566666654
No 159
>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}
Probab=79.26 E-value=0.8 Score=37.14 Aligned_cols=48 Identities=13% Similarity=0.191 Sum_probs=36.2
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 184 VLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 184 ~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
+.+..+ ..+..+|+|+-||.|.++..|+++.- +++..|. ++.++.|++
T Consensus 204 v~~~~~-~~~~~~vlDLycG~G~fsl~La~~~~--~V~gvE~~~~ai~~A~~ 252 (358)
T d1uwva2 204 ALEWLD-VQPEDRVLDLFCGMGNFTLPLATQAA--SVVGVEGVPALVEKGQQ 252 (358)
T ss_dssp HHHHHT-CCTTCEEEEESCTTTTTHHHHHTTSS--EEEEEESCHHHHHHHHH
T ss_pred HHHhhc-cCCCceEEEecccccccchhcccccc--EEEeccCcHHHHHHHHH
Confidence 334344 45668999999999999999988754 5666776 788887764
No 160
>d1zyba1 a.4.5.4 (A:148-220) Probable transcription regulator BT4300, C-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=78.05 E-value=1 Score=27.86 Aligned_cols=41 Identities=7% Similarity=0.127 Sum_probs=33.4
Q ss_pred CCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeecC
Q 041256 50 KLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSLA 101 (244)
Q Consensus 50 ~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~t 101 (244)
++|-+|||..+|++ .+. +.|.|..|...|+++. . .+.+...
T Consensus 27 ~lt~~elA~~lg~s------r~t-vsr~l~~l~~~g~I~~---~-~~~i~I~ 67 (73)
T d1zyba1 27 KVKMDDLARCLDDT------RLN-ISKTLNELQDNGLIEL---H-RKEILIP 67 (73)
T ss_dssp ECCHHHHHHHHTSC------HHH-HHHHHHHHHHTTSCEE---E-TTEEEES
T ss_pred ecCHHHHHHHHCCC------HHH-HHHHHHHHHHCCCEEe---c-CCEEEEc
Confidence 57999999999997 456 9999999999999984 2 3555543
No 161
>d1okra_ a.4.5.39 (A:) Methicillin resistance regulatory protein MecI {Staphylococcus aureus [TaxId: 1280]}
Probab=77.90 E-value=0.54 Score=32.08 Aligned_cols=47 Identities=17% Similarity=0.208 Sum_probs=36.9
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhC----CCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQI----PLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~----~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
.|+.|...|=+. +|+|+.||.+.+ +++ ..- +..+|+-|..-|+++..
T Consensus 8 ~E~~VM~~lW~~---~~~t~~ei~~~l~~~~~~~------~sT-v~t~L~rL~~Kg~l~r~ 58 (120)
T d1okra_ 8 AEWEVMNIIWMK---KYASANNIIEEIQMQKDWS------PKT-IRTLITRLYKKGFIDRK 58 (120)
T ss_dssp HHHHHHHHHHHH---SSEEHHHHHHHHHHHCCCC------HHH-HHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHcC---CCCCHHHHHHHHhcccCcc------HHh-HHHHHHHHHHCCCeEEE
Confidence 456677777775 699999988877 454 334 99999999999999864
No 162
>d1i5za1 a.4.5.4 (A:138-206) Catabolite gene activator protein (CAP), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=75.64 E-value=0.95 Score=27.53 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=29.7
Q ss_pred CCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 50 KLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 50 ~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
|+|-+|||..+|++ ..- +.|.|+.|...|+++.
T Consensus 29 ~lt~~~lA~~~G~s------Ret-vsr~L~~l~~~glI~~ 61 (69)
T d1i5za1 29 KITRQEIGQIVGCS------RET-VGRILKMLEDQNLISA 61 (69)
T ss_dssp ECCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEE
T ss_pred CCCHHHHHHHHCCC------HHH-HHHHHHHHHHCCCEEE
Confidence 68999999999997 455 9999999999999984
No 163
>d2dk5a1 a.4.5.85 (A:8-85) DNA-directed RNA polymerase III subunit RPC6, RPO3F {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.96 E-value=1.6 Score=27.43 Aligned_cols=44 Identities=20% Similarity=0.341 Sum_probs=37.8
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
|++++.++|. .++...+|-.+++++ ... +.+.|..|.+.+++..
T Consensus 18 VY~~I~~ag~-~GIW~~dir~ktnL~------~~~-l~K~LK~Lesk~lIK~ 61 (78)
T d2dk5a1 18 VYQIIEDAGN-KGIWSRDVRYKSNLP------LTE-INKILKNLESKKLIKA 61 (78)
T ss_dssp HHHHHHHHCT-TCEEHHHHHHHTTCC------HHH-HHHHHHHHHHTTSEEE
T ss_pred HHHHHHHccc-cceeHHHHHHHcCCC------HHH-HHHHHHHHHhcCCcee
Confidence 6778887763 689999999999996 456 9999999999999984
No 164
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=74.84 E-value=1.7 Score=24.88 Aligned_cols=41 Identities=15% Similarity=0.162 Sum_probs=30.9
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCC
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYN 85 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~g 85 (244)
.+.+.+.+.- ..++|+++||+.++++ +.. +.|+.+.....-
T Consensus 7 ~i~~yi~~~~-~~~itl~~lA~~~~~S------~~~-l~r~Fk~~~g~t 47 (54)
T d1d5ya1 7 DLLIWLEGHL-DQPLSLDNVAAKAGYS------KWH-LQRMFKDVTGHA 47 (54)
T ss_dssp HHHHHHHTTS-SSSCCCHHHHTTTSSC------HHH-HHHHHHHHHSSC
T ss_pred HHHHHHHHcc-CCCCCHHHHHHHHCcC------HHH-HHHHHHHHHCcC
Confidence 3556666653 3689999999999998 667 888888766543
No 165
>d2gaua1 a.4.5.4 (A:152-232) Transcriptional regulator PG0396, C-terminal domain {Porphyromonas gingivalis [TaxId: 837]}
Probab=74.58 E-value=1.5 Score=27.29 Aligned_cols=34 Identities=24% Similarity=0.143 Sum_probs=30.4
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
-|+|-+|||..+|++ .+. +.|.|..|...|++..
T Consensus 28 ~~lt~~eLA~~~G~s------ret-vsr~L~~l~~~glI~~ 61 (81)
T d2gaua1 28 IYLSREELATLSNMT------VSN-AIRTLSTFVSERMLAL 61 (81)
T ss_dssp CCCCHHHHHHHTTSC------HHH-HHHHHHHHHHTTSEEE
T ss_pred ecCCHHHHHHHHCCC------HHH-HHHHHHHHHHCCCEEe
Confidence 378999999999997 456 9999999999999985
No 166
>d2g9wa1 a.4.5.39 (A:3-124) Hypothetical protein Rv1846c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=74.15 E-value=1.6 Score=29.70 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=38.0
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
.|+.|.+.|=+.| +|+|+.||.+.+.-+ ++. ...- +..+|+-|+.-|++...
T Consensus 8 ~E~~IM~~lW~~g--~~~t~~eI~~~l~~~-~~~-~~sT-V~T~L~rL~~Kg~l~~~ 59 (122)
T d2g9wa1 8 LERAVMDHLWSRT--EPQTVRQVHEALSAR-RDL-AYTT-VMAVLQRLAKKNLVLQI 59 (122)
T ss_dssp HHHHHHHHHHTCS--SCEEHHHHHHHHTTT-CCC-CHHH-HHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHcCC--CCccHHHHHHHHhcc-CCC-cHHH-HHHHHHHHHHCCCEEEe
Confidence 4556777776654 589999999998653 111 1234 99999999999999863
No 167
>d1ft9a1 a.4.5.4 (A:134-213) CO-sensing protein CooA, C-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}
Probab=71.81 E-value=1.5 Score=27.34 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=29.9
Q ss_pred CCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 50 KLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 50 ~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
|+|-+|||..+|++ .+. +.|.|+.|...|+++.
T Consensus 30 ~~t~~eiA~~lG~s------ret-vsr~l~~l~~~g~I~~ 62 (80)
T d1ft9a1 30 DFTVEEIANLIGSS------RQT-TSTALNSLIKEGYISR 62 (80)
T ss_dssp CCCHHHHHHHHCSC------HHH-HHHHHHHHHHTTSSEE
T ss_pred CCCHHHHHHHHCCC------HHH-HHHHHHHHHHCCCEEE
Confidence 78999999999997 456 9999999999999984
No 168
>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}
Probab=71.71 E-value=1.4 Score=32.27 Aligned_cols=38 Identities=18% Similarity=0.053 Sum_probs=30.6
Q ss_pred ceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCC
Q 041256 195 KKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 195 ~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 233 (244)
.+|||+-+|+|.++.+.+.+-.. +++.+|. +.+++..+
T Consensus 45 ~~vLDlFaGsG~~glEalSRGA~-~v~fVE~~~~a~~~ik 83 (183)
T d2ifta1 45 SECLDGFAGSGSLGFEALSRQAK-KVTFLELDKTVANQLK 83 (183)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS-EEEEECSCHHHHHHHH
T ss_pred ceEeecccCccceeeeeeeecce-eeEEeecccchhhhHh
Confidence 58999999999999999999765 7777787 55555443
No 169
>d2zcwa1 a.4.5.4 (A:118-199) Transcriptional regulator TTHA1359, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=71.56 E-value=1.3 Score=27.81 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=29.8
Q ss_pred CCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 50 KLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 50 ~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
++|-+|||+.+|++ ... +.|+|+.|...|++..
T Consensus 29 ~lt~~elA~~lg~s------r~t-v~r~L~~l~~~gli~~ 61 (82)
T d2zcwa1 29 KATHDELAAAVGSV------RET-VTKVIGELAREGYIRS 61 (82)
T ss_dssp ECCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEE
T ss_pred cCCHHHHHHHHCCC------HHH-HHHHHHHHHHCCCEEe
Confidence 68999999999997 456 9999999999999984
No 170
>d1s6la1 a.4.5.79 (A:21-80) Alkylmercury lyase MerB {Escherichia coli [TaxId: 562]}
Probab=70.55 E-value=1.2 Score=26.31 Aligned_cols=39 Identities=13% Similarity=0.195 Sum_probs=26.1
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
+...|++. .|.|.+.||..+|++ ..++-.+|.++==.++
T Consensus 7 LLr~LA~G---~PVs~~~LA~alg~~----------~~eV~~aL~~~p~tEy 45 (60)
T d1s6la1 7 LLRELAKG---RPVSRTTLAGILDWP----------AERVAAVLEQATSTEY 45 (60)
T ss_dssp HHHHHHTT---CCBCHHHHHHHHTCC----------HHHHHHHHTTCCSSCE
T ss_pred HHHHHhCC---CCcCHHHHHHHhCCC----------HHHHHHHHHhCCCcee
Confidence 34567663 799999999999996 3445555555444443
No 171
>d1v4ra1 a.4.5.6 (A:1-100) Transcriptional repressor TraR, N-terminal domain {Streptomyces sp. [TaxId: 1931]}
Probab=69.98 E-value=1.5 Score=28.88 Aligned_cols=42 Identities=29% Similarity=0.251 Sum_probs=33.2
Q ss_pred CCC-CHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceee
Q 041256 49 AKL-SVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYS 99 (244)
Q Consensus 49 g~~-t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~ 99 (244)
..+ |..+||+.++++ ..- +++-++.|...|++.. ..+.|.|-
T Consensus 31 ~~LPs~r~La~~~~vS------r~t-vr~Al~~L~~~Gli~~--~~g~G~~V 73 (100)
T d1v4ra1 31 DTLPSVADIRAQFGVA------AKT-VSRALAVLKSEGLVSS--RGALGTVV 73 (100)
T ss_dssp SBCCCHHHHHHHSSSC------TTH-HHHHTTTTTTSSCCEE--ETTTEEES
T ss_pred CCCccHHHHHHHHCCC------HHH-HHHHHHHHHHCCcEEE--ecCCEEEE
Confidence 356 899999999997 234 9999999999999996 34556554
No 172
>d1stza1 a.4.5.51 (A:14-100) Heat-inducible transcription repressor HrcA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=69.85 E-value=3.2 Score=26.58 Aligned_cols=36 Identities=8% Similarity=0.067 Sum_probs=29.7
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
.|.+..+|++..+++ - .+.- ++..|..|...||+.+
T Consensus 22 ~Pv~s~~i~~~~~l~---~-S~aT-IRn~m~~LE~~G~l~~ 57 (87)
T d1stza1 22 KPVSSQRVLEVSNIE---F-SSAT-IRNDMKKLEYLGYIYQ 57 (87)
T ss_dssp SCBCHHHHHHHSCCC---S-CHHH-HHHHHHHHHHTTSEEC
T ss_pred CccCHHHHHHHhCCC---C-CHHH-HHHHHHHHHHCCcccC
Confidence 699999999997762 1 0445 9999999999999984
No 173
>d1xn7a_ a.4.5.62 (A:) Hypothetical protein YhgG {Escherichia coli [TaxId: 562]}
Probab=67.45 E-value=4.6 Score=24.86 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=36.0
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
|=|.|+-. |...+.+|+..+..+ ... +..+|..|+++|-+++.
T Consensus 7 vRD~iAL~---G~~da~qlS~qL~~P------~Pl-v~AMLerL~aMGK~eri 49 (78)
T d1xn7a_ 7 VRDLLALR---GRMEAAQISQTLNTP------QPM-INAMLQQLESMGKAVRI 49 (78)
T ss_dssp HHHHHHHS---CSBCHHHHHHHTTCC------HHH-HHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHc---CcccHHHHHHHHcCC------hHH-HHHHHHHHHHhhcceec
Confidence 44677765 689999999999995 447 99999999999999864
No 174
>d3e5ua1 a.4.5.4 (A:148-227) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=67.22 E-value=2.2 Score=26.50 Aligned_cols=34 Identities=26% Similarity=0.165 Sum_probs=30.3
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
-|+|-+|||..+|++ ... +.|.|..|...|+++.
T Consensus 29 ~~lt~~elA~~~g~s------ret-vsr~l~~l~~~glI~~ 62 (80)
T d3e5ua1 29 MPLSQKSIGEITGVH------HVT-VSRVLASLKRENILDK 62 (80)
T ss_dssp SCCCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEC
T ss_pred eCCCHHHHHHHHCCC------HHH-HHHHHHHHHHCCcEEe
Confidence 378999999999997 456 9999999999999984
No 175
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=66.80 E-value=3.5 Score=32.93 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=25.5
Q ss_pred CcceEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 041256 193 HVKKLVDVGGGLGITLNMIISKYPHIKGINYDL 225 (244)
Q Consensus 193 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 225 (244)
...+||+||.|.|.+...|+++.---+.++++.
T Consensus 43 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~v~~iE~ 75 (322)
T d1i4wa_ 43 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEK 75 (322)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECC
T ss_pred CCCeEEEECCCCCHHHHHHHhcCCCCEEEEEEC
Confidence 457899999999999999998742235666664
No 176
>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}
Probab=65.41 E-value=1.7 Score=34.90 Aligned_cols=43 Identities=7% Similarity=-0.182 Sum_probs=32.6
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
....++|+|+.||+|.+++..+..- .-+++.+|+ +..++.+++
T Consensus 142 ~~~g~~VLdlf~~~G~~sl~aa~~g-a~~V~~vD~s~~a~~~a~~ 185 (317)
T d2b78a2 142 SAAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLA 185 (317)
T ss_dssp TTBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHH
T ss_pred hhCCCceeecCCCCcHHHHHHHhCC-CceEEEecCCHHHHHHHHH
Confidence 4556899999999999998876643 235778898 777777664
No 177
>d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=64.28 E-value=4 Score=33.09 Aligned_cols=64 Identities=13% Similarity=0.247 Sum_probs=39.9
Q ss_pred CchHHHHHHHHHHhcchhhHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHC---C----CCeEEEccchHHhh
Q 041256 162 DSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKY---P----HIKGINYDLPYVIK 230 (244)
Q Consensus 162 ~~~~~~~f~~aM~~~~~~~~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~---P----~l~~~v~Dlp~vi~ 230 (244)
.|+....|....+.+- ..+..... -++...||++|+|.|.++..+++.. | .++..+++....+.
T Consensus 53 sp~is~~Fg~~ia~~~----~~~~~~~~-~~~~~~ivE~GaG~G~La~dil~~l~~~~~~~~~~~~~~vE~s~~L~ 123 (365)
T d1zkda1 53 SPEISQMFGELLGLWS----ASVWKAAD-EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLR 123 (365)
T ss_dssp HHHHCHHHHHHHHHHH----HHHHHHTT-CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHH
T ss_pred CCchHHHHHHHHHHHH----HHHHHHhC-CCccceEEecCCcccHHHHhhhhhhcccccccccceEEEeccchhHH
Confidence 4667777877765321 12233333 3455789999999999998887753 2 23456677644443
No 178
>d1lvaa4 a.4.5.35 (A:575-634) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=64.00 E-value=11 Score=22.07 Aligned_cols=48 Identities=13% Similarity=0.107 Sum_probs=37.3
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCcee
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLY 98 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y 98 (244)
+...+.+. +++|+++.-+.+|++ -.+ .-.+|.++-..|+..+ .++.++
T Consensus 9 ~i~~l~~~---g~~~v~~frd~~g~s------RK~-ai~lLE~~D~~~~T~R---~gd~Rv 56 (60)
T d1lvaa4 9 VIKNLAST---GPFGLAEARDALGSS------RKY-VLPLLEYLDQVKFTRR---VGDKRV 56 (60)
T ss_dssp HHHHHHTT---SCBCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEE---ETTEEE
T ss_pred HHHHHHhc---CCCcHHHHHHHHCcc------HHH-HHHHHHHHhhcCCeEe---eCCEEE
Confidence 44556654 799999999999996 346 8899999999999985 344443
No 179
>d1sfea1 a.4.2.1 (A:93-176) Ada DNA repair protein {Escherichia coli [TaxId: 562]}
Probab=62.02 E-value=3.2 Score=26.39 Aligned_cols=45 Identities=11% Similarity=0.135 Sum_probs=33.3
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCc
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNA 86 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gl 86 (244)
++..|++.|.+.+.+...|+.|||+.+|.+ .. .+.+=++|..+-+
T Consensus 4 Fq~~V~~~l~~Ip~G~v~TYg~iA~~~g~~-------~a-~RaVg~a~~~Np~ 48 (84)
T d1sfea1 4 FQQQVWQALRTIPCGETVSYQQLANAIGKP-------KA-VRAVASACAANKL 48 (84)
T ss_dssp HHHHHHHHHTTSCTTCCEEHHHHHHHTTCT-------TC-HHHHHHHHHTCCB
T ss_pred HHHHHHHHHHcCCCCCeeeHHHHHHHhCCc-------cc-HHHHHHHHhcCCC
Confidence 456788889888777789999999999973 33 5566666665444
No 180
>d2uyoa1 c.66.1.57 (A:14-310) Putative methyltransferase ML2640 {Mycobacterium leprae [TaxId: 1769]}
Probab=61.40 E-value=4.9 Score=31.66 Aligned_cols=62 Identities=11% Similarity=0.131 Sum_probs=40.7
Q ss_pred HHHHHHHHhcchhhHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccchHHhhh
Q 041256 167 DVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDLPYVIKD 231 (244)
Q Consensus 167 ~~f~~aM~~~~~~~~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~ 231 (244)
..+...+...+.+. ..++..+- -.+...||.+|+|-=.-...+ ...++++.+=+|+|+|++.
T Consensus 65 ~~~~~~~~~Rtr~~-D~~~~~~~-~~g~~qvV~LGaGlDTr~~Rl-~~~~~~~~~EvD~p~vi~~ 126 (297)
T d2uyoa1 65 EHMRSYQAVRTNFF-DTYFNNAV-IDGIRQFVILASGLDSRAYRL-DWPTGTTVYEIDQPKVLAY 126 (297)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHH-HTTCCEEEEETCTTCCHHHHS-CCCTTCEEEEEECHHHHHH
T ss_pred hhhhhHHHHHHHHH-HHHHHHHH-hhCCCeEEEeCcccCChhhhc-CCCcCceEEEcCChHHHHH
Confidence 34444455545443 33333221 245678899999988877666 4567889999999999974
No 181
>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=60.67 E-value=3.4 Score=33.90 Aligned_cols=41 Identities=15% Similarity=-0.023 Sum_probs=35.6
Q ss_pred cceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 194 VKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 194 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
..+|+|..+|+|..++..++.-+.-+++..|+ |..++.+++
T Consensus 46 ~~~vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~ 87 (375)
T d2dula1 46 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKR 87 (375)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHH
Confidence 47899999999999999998888778889998 888887764
No 182
>d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]}
Probab=59.94 E-value=4.1 Score=33.60 Aligned_cols=41 Identities=20% Similarity=0.264 Sum_probs=31.9
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCC--CeEEEccc-hHHhhh
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPH--IKGINYDL-PYVIKD 231 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~--l~~~v~Dl-p~vi~~ 231 (244)
+++...+||||+..|.++..+++.+++ .+++.++- |...+.
T Consensus 210 l~kn~vfIDVGAniG~~s~~f~~~~~~~~~kV~aFEP~p~n~~~ 253 (395)
T d2py6a1 210 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQT 253 (395)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHH
T ss_pred cCCCCEEEECCcCCCHHHHHHHHhcCCCCCEEEEEeCCHHHHHH
Confidence 345689999999999999999888776 47788884 555444
No 183
>d1p6ra_ a.4.5.39 (A:) Penicillinase repressor BlaI {Bacillus licheniformis [TaxId: 1402]}
Probab=59.01 E-value=4.4 Score=25.39 Aligned_cols=51 Identities=20% Similarity=0.348 Sum_probs=35.3
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
.|+.|.+.|=+. ||.|+.||.+.+.-+ .+-...- +.-+|+-|+.-|++...
T Consensus 10 ~E~~IM~~lW~~---~~~t~~ei~~~l~~~--~~~~~tT-v~T~L~rL~~KG~l~~~ 60 (82)
T d1p6ra_ 10 AELEVMKVIWKH---SSINTNEVIKELSKT--STWSPKT-IQTMLLRLIKKGALNHH 60 (82)
T ss_dssp HHHHHHHHHHTS---SSEEHHHHHHHHHHH--SCCCHHH-HHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHhC---CCCCHHHHHHHhccc--cCCcHhH-HHHHHHHHHHCCCeEEE
Confidence 455666777664 689999987776421 0001233 89999999999999864
No 184
>d1o1xa_ c.121.1.1 (A:) Putative sugar-phosphate isomerase {Thermotoga maritima [TaxId: 2336]}
Probab=56.53 E-value=2.4 Score=29.94 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=30.7
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHhhhCCCCCCce
Q 041256 200 VGGGLGITLNMIISKYPHIKGINYDLPYVIKDAPSYPGTL 239 (244)
Q Consensus 200 VGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~~~~i~ 239 (244)
+-||+|.=..-.+.++|++++.+.--|.....++++.+.+
T Consensus 65 liCGtG~G~siaANK~~GIRAa~~~d~~~A~~ar~hNnaN 104 (145)
T d1o1xa_ 65 LLCGTGLGMSIAANRYRGIRAALCLFPDMARLARSHNNAN 104 (145)
T ss_dssp EEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTTCCS
T ss_pred EecCCcHHHHHHHHcCCCCeeeeecCHHHHHHHHHhcCce
Confidence 4467777777788999999997777788888888765433
No 185
>d2vvpa1 c.121.1.1 (A:3-158) Alternate ribose 5-phosphate isomerase B, RpiB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=55.59 E-value=2.8 Score=29.99 Aligned_cols=41 Identities=17% Similarity=-0.008 Sum_probs=31.0
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHhhhCCCCCCcee
Q 041256 200 VGGGLGITLNMIISKYPHIKGINYDLPYVIKDAPSYPGTLF 240 (244)
Q Consensus 200 VGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~~~~i~~ 240 (244)
+-||+|.=..-.+.++|++++.+.--+.....++++.+.++
T Consensus 65 liCGtG~G~sIaANK~~GIRAal~~d~~~A~~ar~hNnaNV 105 (156)
T d2vvpa1 65 VLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQL 105 (156)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSE
T ss_pred EeecCcHHHHHHHHhhcCeEeeeeCCHHHHHHHHHhcCCcE
Confidence 45677777777889999999977777888888887654443
No 186
>d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=55.57 E-value=3.9 Score=29.90 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=29.1
Q ss_pred CCcceEEEecCCccH----HHHHHHHHC----CCCeEEEccc-hHHhhhCC
Q 041256 192 EHVKKLVDVGGGLGI----TLNMIISKY----PHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~----~~~~l~~~~----P~l~~~v~Dl-p~vi~~a~ 233 (244)
.+.-+|.++|||+|. +++.+.+.. +.++.+.-|. +.+++.|+
T Consensus 23 ~~~lrIwsaGCstGeE~YSlA~~l~e~~~~~~~~~~I~atDi~~~~l~~A~ 73 (193)
T d1af7a2 23 HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKAR 73 (193)
T ss_dssp CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHH
T ss_pred CCCeEEEEeCCCCchhHHHHHHHHHHhhhhcCCceEEEeecCChHHhhHhh
Confidence 345789999999998 444455442 2345677787 77787775
No 187
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=55.52 E-value=4 Score=23.67 Aligned_cols=25 Identities=12% Similarity=0.090 Sum_probs=18.2
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHH
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRL 80 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~ 80 (244)
..-|.+|||+.+|++ ++. +...|++
T Consensus 30 RePT~~EiA~~l~~~------~e~-V~~~l~a 54 (57)
T d1l0oc_ 30 RAPTVTEIADHLGIS------PED-VVLAQEA 54 (57)
T ss_dssp SCCBHHHHHHHHTSC------HHH-HHHHHHH
T ss_pred CCCCHHHHHHHHCcC------HHH-HHHHHHH
Confidence 467999999999997 444 5555543
No 188
>d1u5ta2 a.4.5.54 (A:165-232) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=54.99 E-value=8.4 Score=23.27 Aligned_cols=35 Identities=17% Similarity=0.131 Sum_probs=31.1
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
|-.|++.|-..+|.+ ..+ .+..|+.|+..|++-.+
T Consensus 16 G~Vt~s~l~~~lgW~------~~R-a~~aLd~lv~eGl~WvD 50 (68)
T d1u5ta2 16 GYSSISLLKANLGWE------AVR-SKSALDEMVANGLLWID 50 (68)
T ss_dssp SCCBHHHHHHHHCCC------SHH-HHHHHHHHHHTTSSEEE
T ss_pred CceeHHHHHHHhCCC------HHH-HHHHHHHHHhcCcEEEe
Confidence 689999999999997 456 99999999999998754
No 189
>d1gdta1 a.4.1.2 (A:141-183) gamma,delta resolvase (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=54.63 E-value=6.1 Score=21.62 Aligned_cols=24 Identities=13% Similarity=0.271 Sum_probs=19.2
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHH
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLR 79 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr 79 (244)
.++.+.+||+.+|++ -.- ++|+|.
T Consensus 17 ~G~gat~IAk~lgI~------R~S-VYR~L~ 40 (43)
T d1gdta1 17 QGLGASHISKTMNIA------RST-VYKVIN 40 (43)
T ss_dssp TTCCHHHHHHHHTCC------HHH-HHHHHH
T ss_pred cCCCHHHHHHHHCCC------HHH-HHHHHh
Confidence 479999999999996 334 788875
No 190
>d1rjda_ c.66.1.37 (A:) Leucine carboxy methyltransferase Ppm1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=54.21 E-value=6.2 Score=31.52 Aligned_cols=38 Identities=16% Similarity=0.378 Sum_probs=34.5
Q ss_pred cceEEEecCCccHHHHHHHHHCCCCeEEEccchHHhhh
Q 041256 194 VKKLVDVGGGLGITLNMIISKYPHIKGINYDLPYVIKD 231 (244)
Q Consensus 194 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~ 231 (244)
...||-+|||.=.....+...+|+++.+=+|+|+|++.
T Consensus 97 ~~QVV~LGaG~DTr~~Rl~~~~~~~~~~EvD~p~vi~~ 134 (328)
T d1rjda_ 97 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVEL 134 (328)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHH
T ss_pred CcEEEEeCCccchHHHHhhccCCCcEEEECCcHHHHHH
Confidence 36899999999999999999999999999999999873
No 191
>d1sd4a_ a.4.5.39 (A:) Penicillinase repressor BlaI {Staphylococcus aureus [TaxId: 1280]}
Probab=53.94 E-value=5.9 Score=26.68 Aligned_cols=51 Identities=22% Similarity=0.245 Sum_probs=36.8
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
.|+.|.+.|=+. ||.|+.||.+.++-+ .+-...- +.-+|+-|+.-|+|...
T Consensus 7 ~E~~VM~~lW~~---~~~t~~ei~~~l~~~--~~~~~tT-v~T~L~rL~~Kg~l~~~ 57 (122)
T d1sd4a_ 7 AEWDVMNIIWDK---KSVSANEIVVEIQKY--KEVSDKT-IRTLITRLYKKEIIKRY 57 (122)
T ss_dssp HHHHHHHHHHHS---SSEEHHHHHHHHHTT--SCCCHHH-HHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHcC---CCCCHHHHHHHhhcc--CCCcHhH-HHHHHHHHHhhhceeee
Confidence 456667777675 699999999987532 1101233 89999999999999864
No 192
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=52.76 E-value=4 Score=27.89 Aligned_cols=52 Identities=12% Similarity=0.202 Sum_probs=35.6
Q ss_pred hcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 35 ELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 35 ~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
+.-|++.|.+.. +.+.|++||-+.+.-. ++.-...+++|.|+.|+..|++.+
T Consensus 18 R~~Il~~L~~~~-~~h~sa~ei~~~l~~~--~~~i~~aTVYR~L~~l~e~gli~~ 69 (134)
T d1mzba_ 18 RVKILQMLDSAE-QRHMSAEDVYKALMEA--GEDVGLATVYRVLTQFEAAGLVVR 69 (134)
T ss_dssp HHHHHHHHHCC--CCSBCHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHhCC-CCCCCHHHHHHHHHHh--CCCccHHHHHHHHHHHHhccEEEE
Confidence 445788886542 1489999998877532 111011239999999999999985
No 193
>d1xmaa_ a.4.5.61 (A:) Predicted transcriptional regulator {Clostridium thermocellum [TaxId: 1515]}
Probab=52.12 E-value=4.1 Score=26.67 Aligned_cols=62 Identities=16% Similarity=0.216 Sum_probs=38.9
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCC-C--CCCcchhccHHHHHHHHhhCCcccceee-cCCc----eeecCcccc
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLK-D--NNPEAAAMTLDRVLRLLVSYNALHCSFV-DGQR----LYSLAPVSA 105 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~-~--~~~~~~~~~l~rlLr~L~~~gll~~~~~-~~~~----~y~~t~~s~ 105 (244)
|...|.+ +|.+--||.+.+... + .++. +.. +...|+-|...|+++...+ .+.+ .|+.|+.++
T Consensus 12 IL~lL~~----~~~~GYei~~~l~~~~~~~~~is-~gs-lY~~L~rLe~~GlI~~~~~~~~~g~~rk~Y~iT~~G~ 81 (103)
T d1xmaa_ 12 ILSLLIE----GDSYGYEISKNIRIKTDELYVIK-ETT-LYSAFARLEKNGYIKSYYGEETQGKRRTYYRITPEGI 81 (103)
T ss_dssp HHHHHHH----CCEEHHHHHHHHHHHHTTSCCCC-HHH-HHHHHHHHHHTTSEEEEEEEEC--CEEEEEEECHHHH
T ss_pred HHHHHhh----CCccHHHHHHHHHHHcCCeecCC-CCc-hHHHHHHHHHCCCeEEEeeccCCCCCceEEEECHHHH
Confidence 4455666 588888888865310 0 0111 456 9999999999999974321 1111 388888776
No 194
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]}
Probab=51.91 E-value=15 Score=25.02 Aligned_cols=62 Identities=11% Similarity=0.165 Sum_probs=38.2
Q ss_pred HHHHHHHhcchhhHHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCC--CeEEEccchHHh
Q 041256 168 VFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPH--IKGINYDLPYVI 229 (244)
Q Consensus 168 ~f~~aM~~~~~~~~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~--l~~~v~Dlp~vi 229 (244)
.....+..........+.+.+........|+=+|||+-.+--.+.+.++. .+..+.|-|+-.
T Consensus 90 ~i~~~i~~~~~~i~~~i~~~~~~~~~~~~iil~GGGs~ll~~~lk~~~~~~~~~v~i~~~P~~A 153 (163)
T d2zgya2 90 IVTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGGGAELICDAVKKHTQIRDERFFKTNNSQYD 153 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEESTTHHHHHHHHHHTSCCCGGGEECCSCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccceEEEECchHHHHHHHHHHHhCCCCCCeEECCCcHhH
Confidence 34444444444444455555443667788999999986655556666754 467887877543
No 195
>d2bgca1 a.4.5.4 (A:138-237) Listeriolysin regulatory protein PrfA, C-terminal domain {Bacteria (Listeria monocytogenes) [TaxId: 1639]}
Probab=51.72 E-value=6.8 Score=25.49 Aligned_cols=59 Identities=8% Similarity=0.045 Sum_probs=38.5
Q ss_pred hhHHHHHHHHHHhcChhhH--HhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 23 AIVLPAVMQAVVELDVFEI--ISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 23 g~~~~~~L~~a~~lgifd~--L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
|-+....+..+-..|.... ..-. .-++|-+|||..+|++ +| +- +.|+|+.|...|+++.
T Consensus 4 G~va~~Ll~La~~~G~~~~~g~~i~--~~~lTqeeLA~~lG~s---~R--eT-VsR~L~~L~~~GlI~~ 64 (100)
T d2bgca1 4 GSICSQLLILTYVYGKETPDGIKIT--LDNLTMQELGYSSGIA---HS--SA-VSRIISKLKQEKVIVY 64 (100)
T ss_dssp HHHHHHHHHHHHHHEEEETTEEEEC--CSCCCHHHHHHHTTCC---CH--HH-HHHHHHHHHHTTSEEE
T ss_pred cHHHHHHHHHHHHhCCCCCCCeEEe--ccccCHHHHHHHhCCc---hH--HH-HHHHHHHHHHCCCEEE
Confidence 4444555555555554321 0000 0158999999999985 32 24 8899999999999994
No 196
>d2p8ta1 a.4.5.72 (A:14-82) Hypothetical protein PH0730 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=50.24 E-value=11 Score=22.88 Aligned_cols=47 Identities=15% Similarity=0.159 Sum_probs=37.3
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeecCccccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSLAPVSAY 106 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~t~~s~~ 106 (244)
.|+.-.-||+.+++. ++. ++-.++.|-..|+++. ...| -.+|+.+..
T Consensus 16 qPiGRr~La~~L~l~------Er~-vRte~~~Lk~~gLI~~---~~~G-m~lTe~G~~ 62 (69)
T d2p8ta1 16 EPLGRKQISERLELG------EGS-VRTLLRKLSHLDIIRS---KQRG-HFLTLKGKE 62 (69)
T ss_dssp SCBCHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEE---C--C-EEECHHHHH
T ss_pred CCccHHHHHHHcCCc------HHH-HHHHHHHHHHCCCeee---eCCC-CEECHhHHH
Confidence 599999999999997 677 9999999999999994 3334 466766653
No 197
>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI {Streptomyces clavuligerus [TaxId: 1901]}
Probab=50.11 E-value=7.2 Score=29.50 Aligned_cols=33 Identities=18% Similarity=0.096 Sum_probs=24.5
Q ss_pred CcceEEEecCCccHHHHHHH---H-HCCCCeEEEccc
Q 041256 193 HVKKLVDVGGGLGITLNMII---S-KYPHIKGINYDL 225 (244)
Q Consensus 193 ~~~~vvDVGGG~G~~~~~l~---~-~~P~l~~~v~Dl 225 (244)
++++||.||...|.-+.-++ + ..++.+.+.+|.
T Consensus 80 KPk~ILEIGv~~GgS~~~~a~~l~~~~~~~kI~giDI 116 (232)
T d2bm8a1 80 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDR 116 (232)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCCEEEEECCCCchHHHHHHHHHHhcCCCceEEecCc
Confidence 46899999999997554333 3 357788888887
No 198
>d1jhga_ a.4.12.1 (A:) Trp repressor, TrpR {Escherichia coli [TaxId: 562]}
Probab=48.64 E-value=8.3 Score=25.23 Aligned_cols=40 Identities=15% Similarity=0.173 Sum_probs=31.3
Q ss_pred HHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHH
Q 041256 31 QAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLL 81 (244)
Q Consensus 31 ~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L 81 (244)
..+-++.|+..|.+ |.+|..+|++.+|++ ..- +.|.=|.|
T Consensus 43 ~la~R~~ia~~L~~----G~~s~reI~~~~gvs------~aT-ItR~s~~L 82 (101)
T d1jhga_ 43 ALGTRVRIIEELLR----GEMSQRELKNELGAG------IAT-ITRGSNSL 82 (101)
T ss_dssp HHHHHHHHHHHHHH----CCSCHHHHHHHHCCC------HHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHc----CCcCHHHHHHHhCCC------hHH-HHHHHHHH
Confidence 35678899999988 679999999999997 333 66666665
No 199
>d1eucb1 c.23.4.1 (B:246-393) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=48.40 E-value=6.9 Score=27.52 Aligned_cols=41 Identities=15% Similarity=0.331 Sum_probs=30.0
Q ss_pred HHHhhcCCCCCcceEEEecCCccH----HHHHHHHHCCCCeEEEccc
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGI----TLNMIISKYPHIKGINYDL 225 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~----~~~~l~~~~P~l~~~v~Dl 225 (244)
.++..+. .++..++|||||.=. -+..++.+.|++++++.++
T Consensus 36 D~i~~~G--g~pANFlDiGGga~~e~v~~al~iil~d~~Vk~IlINI 80 (148)
T d1eucb1 36 DIIFLNG--GKPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVNI 80 (148)
T ss_dssp HHHHHTT--CCBSEEEECCSSCCHHHHHHHHHHTTSCTTCCEEEEEE
T ss_pred HHHHHcC--CCeeeEEecCCCCCHHHHHHHHHHHHCCCCccEEEEEe
Confidence 4455554 456889999999654 4556777899999988774
No 200
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Probab=47.84 E-value=5.3 Score=30.40 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=28.1
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDLP 226 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dlp 226 (244)
-+.+++|+=||+|.+.++.+..-+.-+.+++|+|--
T Consensus 27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~ 62 (370)
T d2iida1 27 TSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEAS 62 (370)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 456789999999999988885444347899999853
No 201
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=47.48 E-value=6.2 Score=23.22 Aligned_cols=24 Identities=8% Similarity=0.137 Sum_probs=18.7
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHH
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLR 79 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr 79 (244)
.|.|..|||+.+|++ .+. ++++-+
T Consensus 27 ~~~tl~eIa~~lgiS------~er-Vrqi~~ 50 (61)
T d1ku3a_ 27 REHTLEEVGAYFGVT------RER-IRQIEN 50 (61)
T ss_dssp SCCCHHHHHHHHTCC------HHH-HHHHHH
T ss_pred CCCCHHHHHHHHCCC------HHH-HHHHHH
Confidence 589999999999997 445 665543
No 202
>d2o3fa1 a.4.1.20 (A:1-83) Putative transcriptional regulator YbbH {Bacillus subtilis [TaxId: 1423]}
Probab=46.48 E-value=6.7 Score=24.55 Aligned_cols=30 Identities=23% Similarity=0.080 Sum_probs=21.7
Q ss_pred CCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCc
Q 041256 50 KLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNA 86 (244)
Q Consensus 50 ~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gl 86 (244)
-.|+.+||++++++ +.- +.|+.+.|--.||
T Consensus 36 ~~si~~lA~~~~vS------~sT-i~Rf~kklG~~gf 65 (83)
T d2o3fa1 36 ESTVNEISALANSS------DAA-VIRLCKSLGLKGF 65 (83)
T ss_dssp TCCHHHHHHHTTCC------HHH-HHHHHHHTTCSSH
T ss_pred HccHHHHHHHHCCC------HHH-HHHHHHHhCCCCH
Confidence 57999999999997 445 6666666644444
No 203
>d1qnta1 a.4.2.1 (A:92-176) O6-alkylguanine-DNA alkyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.25 E-value=14 Score=23.10 Aligned_cols=40 Identities=10% Similarity=0.055 Sum_probs=28.6
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCC
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYN 85 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~g 85 (244)
|+++|.+.+.+.-.|+.+||+.+|.+ .. .+.+=.+|..+-
T Consensus 8 vw~~l~~IP~G~v~TYg~iA~~~g~p-------~a-aRaVg~a~~~Np 47 (85)
T d1qnta1 8 LWKLLKVVKFGEVISYQQLAALAGNP-------KA-ARAVGGAMRGNP 47 (85)
T ss_dssp HHHHHHHCCTTCCEEHHHHHHHTTCT-------TC-HHHHHHHHTTCS
T ss_pred HHHHHhcCCCCCcccHHHHHHHcCCc-------ch-HHHHHHHHHhCC
Confidence 57888888766789999999999973 23 445555555443
No 204
>d1a04a1 a.4.6.2 (A:150-216) Nitrate/nitrite response regulator (NarL) {Escherichia coli [TaxId: 562]}
Probab=45.14 E-value=8.3 Score=22.84 Aligned_cols=25 Identities=20% Similarity=0.381 Sum_probs=20.9
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCC
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLK 63 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~ 63 (244)
-|..|+..+.+ +.|..+||+.++++
T Consensus 10 rE~~vl~ll~~-----G~s~~eIA~~l~iS 34 (67)
T d1a04a1 10 RERDILKLIAQ-----GLPNKMIARRLDIT 34 (67)
T ss_dssp HHHHHHHHHHT-----TCCHHHHHHHHTCC
T ss_pred HHHHHHHHHHh-----CCCHHHHHHHHCCC
Confidence 45667888876 68999999999997
No 205
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=44.63 E-value=7.7 Score=22.70 Aligned_cols=14 Identities=0% Similarity=0.145 Sum_probs=12.7
Q ss_pred CCCHHHHHHhCCCC
Q 041256 50 KLSVAEIVAQIPLK 63 (244)
Q Consensus 50 ~~t~~eLA~~~~~~ 63 (244)
+.|..|||+.+|++
T Consensus 2 ~~Ti~diA~~agvS 15 (59)
T d1efaa1 2 PVTLYDVAEYAGVS 15 (59)
T ss_dssp CCCHHHHHHTTTSC
T ss_pred CCCHHHHHHHHCCC
Confidence 57999999999997
No 206
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=44.41 E-value=5.5 Score=25.15 Aligned_cols=25 Identities=12% Similarity=0.163 Sum_probs=22.1
Q ss_pred CCCHHHHHHhCCCCCCCCcchhccHHHHHHHH
Q 041256 50 KLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLL 81 (244)
Q Consensus 50 ~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L 81 (244)
+.|+.+||+.+|++ +.- |++|++..
T Consensus 23 g~s~~~vA~~lGIs------~~t-l~~W~k~~ 47 (89)
T d2jn6a1 23 GASLQQIANDLGIN------RVT-LKNWIIKY 47 (89)
T ss_dssp GSCHHHHHHHHTSC------HHH-HHHHHHHH
T ss_pred CCcHHHHHHHHCCC------HHH-HHHHHHHH
Confidence 68999999999997 566 99999975
No 207
>d2htja1 a.4.5.73 (A:1-73) P fimbrial regulatory protein PapI {Escherichia coli [TaxId: 562]}
Probab=44.22 E-value=13 Score=22.01 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=32.4
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
.|...|.+. ++.+..|||+.++++ .-. .+..|-.|...|-+.++
T Consensus 4 ~Il~fl~~~---~~~~T~EIAea~gvs------aYQ-ARyYL~~Lekegki~Rs 47 (73)
T d2htja1 4 EILEFLNRH---NGGKTAEIAEALAVT------DYQ-ARYYLLLLEKAGMVQRS 47 (73)
T ss_dssp HHHHHHHHS---CCCCHHHHHHHHTSC------HHH-HHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHhc---CCccHHHHHHHhhhH------HHH-HHHHHHHHHHhcCcccC
Confidence 356677775 466999999999997 233 66677778778888753
No 208
>d1l3la1 a.4.6.2 (A:170-234) Quorum-sensing transcription factor TraR, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=43.44 E-value=7.8 Score=22.80 Aligned_cols=25 Identities=20% Similarity=0.137 Sum_probs=20.6
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCC
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLK 63 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~ 63 (244)
-|..|+..+.. +.|..|||+.++++
T Consensus 8 rE~~vl~l~~~-----G~s~~eIA~~l~iS 32 (65)
T d1l3la1 8 KEATYLRWIAV-----GKTMEEIADVEGVK 32 (65)
T ss_dssp HHHHHHHHHTT-----TCCHHHHHHHHTCC
T ss_pred HHHHHHHHHHh-----cCCHHHHHHHHCCC
Confidence 35667777775 79999999999997
No 209
>d1uxda_ a.35.1.5 (A:) Fructose repressor (FruR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=42.22 E-value=7.3 Score=22.74 Aligned_cols=13 Identities=15% Similarity=0.243 Sum_probs=11.1
Q ss_pred CCHHHHHHhCCCC
Q 041256 51 LSVAEIVAQIPLK 63 (244)
Q Consensus 51 ~t~~eLA~~~~~~ 63 (244)
+|+.|||+.+|++
T Consensus 1 vTl~diA~~agvS 13 (59)
T d1uxda_ 1 MKLDEIARLAGVS 13 (59)
T ss_dssp CCHHHHHHHHTSC
T ss_pred CCHHHHHHHHCcC
Confidence 4788999999987
No 210
>d1mgta1 a.4.2.1 (A:89-169) O6-alkylguanine-DNA alkyltransferase {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=41.30 E-value=10 Score=23.66 Aligned_cols=29 Identities=17% Similarity=0.384 Sum_probs=21.1
Q ss_pred hcChhhHHhh-cCCCCCCCHHHHHHhCCCC
Q 041256 35 ELDVFEIISK-AGPGAKLSVAEIVAQIPLK 63 (244)
Q Consensus 35 ~lgifd~L~~-~~~~g~~t~~eLA~~~~~~ 63 (244)
+..|+++|.+ .+.+.-.|+.|||+.+|.+
T Consensus 5 q~~V~~~l~~~IP~G~v~TYg~iA~~~g~~ 34 (81)
T d1mgta1 5 EKKVYEWLTKNVKRGSVITYGDLAKALNTS 34 (81)
T ss_dssp HHHHHHHHHHHSCTTCCEEHHHHHHHTTSC
T ss_pred HHHHHHHHHHhCCCCCeEeHHHHHHHcCCc
Confidence 4456776643 5545679999999999964
No 211
>d2nu7b1 c.23.4.1 (B:239-388) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=40.91 E-value=15 Score=25.75 Aligned_cols=41 Identities=20% Similarity=0.285 Sum_probs=30.4
Q ss_pred HHHhhcCCCCCcceEEEecCCccH----HHHHHHHHCCCCeEEEccc
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGI----TLNMIISKYPHIKGINYDL 225 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~----~~~~l~~~~P~l~~~v~Dl 225 (244)
.++..+. .++..++|+|||.=. -+..++...|++++++.++
T Consensus 36 D~i~~~G--g~pANFlDiGG~a~~e~v~~al~lil~d~~vk~IlINi 80 (150)
T d2nu7b1 36 DIVKLHG--GEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNI 80 (150)
T ss_dssp HHHHHTT--CCBCEEEECCSCCCHHHHHHHHHHHHTSTTCCEEEEEE
T ss_pred HHHHHCC--CCeeEEEecCCCccHHHHHHHHHHHHcCCCCCEEEEEE
Confidence 4455554 467899999999765 4556777889999988764
No 212
>d1fsea_ a.4.6.2 (A:) Germination protein GerE {Bacillus subtilis [TaxId: 1423]}
Probab=40.83 E-value=9.5 Score=22.48 Aligned_cols=25 Identities=24% Similarity=0.456 Sum_probs=20.4
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCC
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLK 63 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~ 63 (244)
-|..|+..+.+ +.|..|||+.++++
T Consensus 8 rE~~vl~l~~~-----G~s~~eIA~~L~is 32 (67)
T d1fsea_ 8 REREVFELLVQ-----DKTTKEIASELFIS 32 (67)
T ss_dssp HHHHHHHHHTT-----TCCHHHHHHHHTSC
T ss_pred HHHHHHHHHHc-----cCCHHHHHHHHCCC
Confidence 35567777775 79999999999997
No 213
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}
Probab=40.60 E-value=13 Score=26.95 Aligned_cols=44 Identities=18% Similarity=0.114 Sum_probs=34.3
Q ss_pred CCCcceEEEecCCc-cHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 191 FEHVKKLVDVGGGL-GITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 191 ~~~~~~vvDVGGG~-G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
.+...+|+.+|+|. |.++..+++....-+.++.|. |+-.+.+++
T Consensus 23 v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~ 68 (195)
T d1kola2 23 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 68 (195)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhh
Confidence 66678999999887 778888888888888888887 666665543
No 214
>d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]}
Probab=40.36 E-value=13 Score=30.08 Aligned_cols=35 Identities=20% Similarity=0.203 Sum_probs=23.9
Q ss_pred CCcceEEEecCCccHHH-------H-HHHHH--------CCCCeEEEccch
Q 041256 192 EHVKKLVDVGGGLGITL-------N-MIISK--------YPHIKGINYDLP 226 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~-------~-~l~~~--------~P~l~~~v~Dlp 226 (244)
++.-+|.|+||++|..+ + ++.++ -|.+++..=|||
T Consensus 50 ~~~~~IADlGCS~G~Ntl~~v~~iI~~i~~~~~~~~~~~~pe~qvf~nDLP 100 (359)
T d1m6ex_ 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLP 100 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECT
T ss_pred CCceEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCCCC
Confidence 45578999999999865 2 33322 355666777888
No 215
>d2esha1 a.4.5.61 (A:4-117) Hypothetical protein TM0937 {Thermotoga maritima [TaxId: 2336]}
Probab=40.30 E-value=22 Score=23.27 Aligned_cols=62 Identities=13% Similarity=0.186 Sum_probs=40.4
Q ss_pred hhhHHhhcCCCCCCCHHHHHHhCC---CCC-CCCcchhccHHHHHHHHhhCCcccceeecCCc----eeecCcccc
Q 041256 38 VFEIISKAGPGAKLSVAEIVAQIP---LKD-NNPEAAAMTLDRVLRLLVSYNALHCSFVDGQR----LYSLAPVSA 105 (244)
Q Consensus 38 ifd~L~~~~~~g~~t~~eLA~~~~---~~~-~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~----~y~~t~~s~ 105 (244)
|...|.+ +|.+--||.+.+. .+. .++. +.. ++.+|+-|...|+++...+.+++ .|+.|+.++
T Consensus 15 iL~lL~~----~~~~GYei~~~i~~~~~~~~~~~~-~gt-iY~~L~rLe~~G~I~~~~~~~~g~~rk~Y~IT~~G~ 84 (114)
T d2esha1 15 ILLLVAE----KPSHGYELAERLAEFGIEIPGIGH-MGN-IYRVLADLEESGFLSTEWDTTVSPPRKIYRITPQGK 84 (114)
T ss_dssp HHHHHHH----SCBCHHHHHHHHHTTCCSSTTCCC-CCC-HHHHHHHHHHTTSEEEEEECSSSSCEEEEEECHHHH
T ss_pred HHHHHhc----CCccHHHHHHHHHHhcCCCcccCC-CCc-HHHHHHHHHHCCCeEEEeecCCCCCcEEEEECHHHH
Confidence 4556766 6889888888763 110 1111 235 99999999999999853322222 488888775
No 216
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=40.25 E-value=9.2 Score=22.13 Aligned_cols=13 Identities=0% Similarity=0.327 Sum_probs=11.3
Q ss_pred CCHHHHHHhCCCC
Q 041256 51 LSVAEIVAQIPLK 63 (244)
Q Consensus 51 ~t~~eLA~~~~~~ 63 (244)
+|+.|||+.+|++
T Consensus 2 vTi~dvA~~agvS 14 (57)
T d2hsga1 2 VTIYDVAREASVS 14 (57)
T ss_dssp CCHHHHHHHTTSC
T ss_pred cCHHHHHHHHCcC
Confidence 5889999999987
No 217
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=39.76 E-value=12 Score=30.50 Aligned_cols=31 Identities=13% Similarity=0.071 Sum_probs=23.3
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHHC
Q 041256 184 VLESYKGFEHVKKLVDVGGGLGITLNMIISKY 215 (244)
Q Consensus 184 ~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~ 215 (244)
+++.++ -....+|+|-.||+|.++.++.++.
T Consensus 154 mv~ll~-~~~~~~IlDPacGsG~fL~~a~~~~ 184 (425)
T d2okca1 154 MVDCIN-PQMGETVCDPACGTGGFLLTAYDYM 184 (425)
T ss_dssp HHHHHC-CCTTCCEEETTCTTCHHHHHHHHHH
T ss_pred hheecc-CcccceeeccccccCccHHHHHHHH
Confidence 344444 3456899999999999999887754
No 218
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}
Probab=38.78 E-value=17 Score=25.95 Aligned_cols=34 Identities=21% Similarity=0.058 Sum_probs=30.4
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL 225 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 225 (244)
...++|+=||||...+..++.-+--+.+++++|.
T Consensus 41 ~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~ 74 (179)
T d1ps9a3 41 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDA 74 (179)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCCcEEEEECccHHHHHHHHHHHhhccceEEEec
Confidence 4569999999999999999888888899999996
No 219
>d2p7vb1 a.4.13.2 (B:546-613) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]}
Probab=36.70 E-value=9.7 Score=22.88 Aligned_cols=24 Identities=8% Similarity=0.192 Sum_probs=18.7
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHH
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLR 79 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr 79 (244)
.|.|.+|||+.+|++ .+. ++++-.
T Consensus 24 ~~~tl~eI~~~lgiS------rer-Vrqie~ 47 (68)
T d2p7vb1 24 TDYTLEEVGKQFDVT------RER-IRQIEA 47 (68)
T ss_dssp SCCCHHHHHHHHTCC------HHH-HHHHHH
T ss_pred CcCCHHHHHHHHCCC------HHH-HHHHHH
Confidence 589999999999997 345 666544
No 220
>d1vz0a1 a.4.14.1 (A:116-208) Putative partitioning protein ParB/Spo0J {Thermus thermophilus [TaxId: 274]}
Probab=36.56 E-value=13 Score=23.73 Aligned_cols=26 Identities=23% Similarity=0.342 Sum_probs=21.7
Q ss_pred CCCHHHHHHhCCCCCCCCcchhccHHHHHHHHh
Q 041256 50 KLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLV 82 (244)
Q Consensus 50 ~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~ 82 (244)
..|.++||+++|.+ ... +...||.|-
T Consensus 19 g~t~~~iA~~~Gks------~~~-V~~~LrLl~ 44 (93)
T d1vz0a1 19 GLTQEEVARRVGKA------RST-VANALRLLQ 44 (93)
T ss_dssp TCCHHHHHHHHTCC------HHH-HHHHHHGGG
T ss_pred CCCHHHHHHHHccc------hHH-HHHHHHHHH
Confidence 57999999999997 556 888888774
No 221
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=36.18 E-value=7.3 Score=23.76 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=24.1
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALH 88 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~ 88 (244)
..-|.+|||+.+|++ .+- +.++|.......++.
T Consensus 25 R~Pt~~EiA~~lg~s------~~e-~~~~l~~~~~~~~~S 57 (77)
T d1rp3a1 25 REPTDEEVAKELGIS------TEE-LFKTLDKINFSYILS 57 (77)
T ss_dssp SCCCHHHHHHHHTSC------HHH-HHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHCcC------HHH-HHHHHHHHhcCCcee
Confidence 467999999999997 455 777776655444443
No 222
>d2dt5a1 a.4.5.38 (A:4-77) Transcriptional repressor Rex, N-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=35.26 E-value=11 Score=23.10 Aligned_cols=41 Identities=12% Similarity=0.206 Sum_probs=27.6
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccc
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALH 88 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~ 88 (244)
.++..|.+.|. .-++..+||+.+|++ +.. +++=|-+ .|.+=
T Consensus 13 r~L~~l~~~g~-~~vSS~~La~~~gi~------~~q-VRKDls~---fG~~G 53 (74)
T d2dt5a1 13 RILEELEAQGV-HRTSSEQLGGLAQVT------AFQ-VRKDLSY---FGSYG 53 (74)
T ss_dssp HHHHHHHHTTC-CEECHHHHHHHHTSC------HHH-HHHHHHH---TTCCC
T ss_pred HHHHHHHHCCC-eeEcHHHHHHHHCcC------HHH-HHHHHHH---hcCCC
Confidence 44556666543 358999999999997 455 5555544 46665
No 223
>d1hsta_ a.4.5.13 (A:) Histone H5, globular domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=35.13 E-value=16 Score=22.16 Aligned_cols=52 Identities=19% Similarity=0.118 Sum_probs=32.1
Q ss_pred CCCCHHHHHHhCCCC-CCCCcchhccHHHHHHHHhhCCcccceeecC-CceeecC
Q 041256 49 AKLSVAEIVAQIPLK-DNNPEAAAMTLDRVLRLLVSYNALHCSFVDG-QRLYSLA 101 (244)
Q Consensus 49 g~~t~~eLA~~~~~~-~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~-~~~y~~t 101 (244)
++.|...|.+.+... +-+...... +.+-|+-++..|.|.+..-.+ .|.|+++
T Consensus 20 ~GsS~~AI~kyI~~~y~~~~~~~~~-l~~aLk~~v~~G~l~q~kg~GasGsfkl~ 73 (74)
T d1hsta_ 20 GGSSRQSIQKYIKSHYKVGHNADLQ-IKLSIRRLLAAGVLKQTKGVGASGSFRLA 73 (74)
T ss_dssp SCEEHHHHHHHHHHHSCCCTTHHHH-HHHHHHHHHHTTSEEEECCSSCCCEEEEC
T ss_pred CCcCHHHHHHHHHHHCCCchhHHHH-HHHHHHHHHHcCcEEeeccCCCcceeecC
Confidence 567888887765422 101111235 888899999999999642111 3678875
No 224
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=34.31 E-value=15 Score=21.41 Aligned_cols=15 Identities=13% Similarity=0.244 Sum_probs=13.6
Q ss_pred CCCCHHHHHHhCCCC
Q 041256 49 AKLSVAEIVAQIPLK 63 (244)
Q Consensus 49 g~~t~~eLA~~~~~~ 63 (244)
...|.+|||+.+|++
T Consensus 36 ~~~s~~eIA~~lgis 50 (71)
T d1rp3a2 36 EELPAKEVAKILETS 50 (71)
T ss_dssp SCCCHHHHHHHTTSC
T ss_pred HhCCHHHHHHHHCCC
Confidence 368999999999997
No 225
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=34.08 E-value=15 Score=28.29 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=26.6
Q ss_pred ceEEEecCCccHHHHH--HHHHCCCCeEEEccch
Q 041256 195 KKLVDVGGGLGITLNM--IISKYPHIKGINYDLP 226 (244)
Q Consensus 195 ~~vvDVGGG~G~~~~~--l~~~~P~l~~~v~Dlp 226 (244)
.-|+=||||.+.+..+ ++++.++++++++|..
T Consensus 51 ~~~~~~g~g~~g~~~a~~~~~~~~~~~~~~~~~~ 84 (311)
T d2gjca1 51 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 84 (311)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEcC
Confidence 4599999999888766 5667899999999864
No 226
>d1r71a_ a.4.14.1 (A:) Transcriptional repressor protein KorB DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=34.05 E-value=13 Score=24.33 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=20.9
Q ss_pred CCCHHHHHHhCCCCCCCCcchhccHHHHHHHHh
Q 041256 50 KLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLV 82 (244)
Q Consensus 50 ~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~ 82 (244)
+.|.++||+++|.+ ... +.+.|+.+.
T Consensus 30 g~s~~eiA~~~G~s------~~~-V~~~l~L~~ 55 (114)
T d1r71a_ 30 GKKKGDIAKEIGKS------PAF-ITQHVTLLD 55 (114)
T ss_dssp TCCHHHHHHHHTCC------HHH-HHHHHGGGS
T ss_pred CCCHHHHHHHHCCc------HHH-HHHHHHHhC
Confidence 46999999999997 556 888887764
No 227
>d1ldja3 e.40.1.1 (A:411-686) Cullin homolog 1, cul-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.94 E-value=11 Score=28.89 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=30.2
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
..+|+++|++.+|++ .+. +.+.|..|+..+++..
T Consensus 208 ~~~t~~ei~~~~~i~------~~~-l~~~L~~L~~~kll~~ 241 (276)
T d1ldja3 208 DAYTVQQLTDSTQIK------MDI-LAQVLQILLKSKLLVL 241 (276)
T ss_dssp SEEEHHHHHHHTCCC------HHH-HHHHHHHHHHTTTEEC
T ss_pred CccCHHHHHHHHCcC------HHH-HHHHHHHHHhCCEEEe
Confidence 479999999999997 456 9999999999999874
No 228
>d1yioa1 a.4.6.2 (A:131-200) Response regulatory protein StyR, C-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=33.39 E-value=15 Score=21.83 Aligned_cols=27 Identities=15% Similarity=0.235 Sum_probs=22.5
Q ss_pred HHHhcChhhHHhhcCCCCCCCHHHHHHhCCCC
Q 041256 32 AVVELDVFEIISKAGPGAKLSVAEIVAQIPLK 63 (244)
Q Consensus 32 ~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~ 63 (244)
+.-|..|+..|.. +.|..+||..++++
T Consensus 14 T~rE~~vl~~l~~-----G~s~~eIA~~l~iS 40 (70)
T d1yioa1 14 TGREQQVLQLTIR-----GLMNKQIAGELGIA 40 (70)
T ss_dssp CHHHHHHHHHHTT-----TCCHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHc-----CCCHHHHHHHHCCC
Confidence 3457778888875 78999999999997
No 229
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=33.27 E-value=20 Score=20.99 Aligned_cols=36 Identities=8% Similarity=0.170 Sum_probs=23.9
Q ss_pred CCCCHHHHHHhCCCCC--------CCCcchhccHHHHHHHHhhCCc
Q 041256 49 AKLSVAEIVAQIPLKD--------NNPEAAAMTLDRVLRLLVSYNA 86 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~--------~~~~~~~~~l~rlLr~L~~~gl 86 (244)
..+|-+|||+.+|+++ ++...+ . +.++++.+.++|+
T Consensus 18 ~gltq~elA~~~gv~~~~is~ie~g~~~~~-s-~~~L~~ia~~Lg~ 61 (69)
T d2a6ca1 18 SGLTQFKAAELLGVTQPRVSDLMRGKIDLF-S-LESLIDMITSIGL 61 (69)
T ss_dssp TTCCHHHHHHHHTSCHHHHHHHHTTCGGGC-C-HHHHHHHHHHTTC
T ss_pred cCCCHHHHHHHHHcCHhHHHHHHcccccch-h-HHHHHHHHHHhCC
Confidence 5899999999999972 111111 2 6667777766665
No 230
>d1pdoa_ c.54.1.1 (A:) IIA domain of mannose transporter, IIA-Man {Escherichia coli [TaxId: 562]}
Probab=33.23 E-value=19 Score=24.04 Aligned_cols=51 Identities=20% Similarity=0.230 Sum_probs=36.5
Q ss_pred HHHhhcCCCCCcceEEEecCCccHHH-HHHHHHCCCCeE-EEccchHHhhhCC
Q 041256 183 KVLESYKGFEHVKKLVDVGGGLGITL-NMIISKYPHIKG-INYDLPYVIKDAP 233 (244)
Q Consensus 183 ~~~~~~~~~~~~~~vvDVGGG~G~~~-~~l~~~~P~l~~-~v~Dlp~vi~~a~ 233 (244)
..++.++.-++.-.+.|+.||+=... ..++..+|+++. +..++|-+++.+.
T Consensus 50 ~~i~~~~~~~~vliltDl~GGsp~n~~~~~~~~~~~v~visG~Nlpmllea~~ 102 (129)
T d1pdoa_ 50 AQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETLM 102 (129)
T ss_dssp HHHTTSCCTTCEEEEESSTTSHHHHHHHHHHTTCTTEEEEESCCHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEEEeccccchhHHHHHHhccCCCEEEEEcCCHHHHHHHHH
Confidence 44555552245678889999998654 556777888875 8899998888753
No 231
>d1vpta_ c.66.1.25 (A:) Polymerase regulatory subunit VP39 {Vaccinia virus [TaxId: 10245]}
Probab=32.80 E-value=13 Score=29.04 Aligned_cols=49 Identities=10% Similarity=0.030 Sum_probs=35.2
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCC----eEEEccchHHhhhCCCCCCcee
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHI----KGINYDLPYVIKDAPSYPGTLF 240 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l----~~~v~Dlp~vi~~a~~~~~i~~ 240 (244)
.+..+||=||.|.|....-|.+.||++ +.+++|--.-......+++|.+
T Consensus 59 ~~~~~VVYiGSApG~Hi~~L~~lf~~~~~~ikw~LiDp~~~d~~L~~l~nv~l 111 (297)
T d1vpta_ 59 LDGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTL 111 (297)
T ss_dssp STTCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEE
T ss_pred CCCcEEEEeccCCCchHHHHHHHHHhhCCceEEEEECCCccChhhccccceEe
Confidence 345799999999999999999999975 7899995222233334444443
No 232
>d2fq3a1 a.4.1.18 (A:311-395) Transcription regulatory protein swi3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.67 E-value=47 Score=20.45 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=40.5
Q ss_pred HHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccc
Q 041256 29 VMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALH 88 (244)
Q Consensus 29 ~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~ 88 (244)
-.+..++=.|.....+.+ ...+|..+....+..+ ... +.|+.+.|...|++.
T Consensus 31 ~~Yl~iRN~Il~~w~~np-~~~Lt~~~~~~~~~~d------~~~-~~ri~~FL~~~G~IN 82 (85)
T d2fq3a1 31 EVYMRYRNFMVNSYRLNP-NEYFSVTTARRNVSGD------AAA-LFRLHKFLTKWGLIN 82 (85)
T ss_dssp HHHHHHHHHHHHHHHHCT-TSCCCHHHHHHHSCSC------HHH-HHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHHhCC-CeeeeHHHHHhhccCC------HHH-HHHHHHHHHHcCccC
Confidence 455666667777766654 3689999999888765 567 999999999999986
No 233
>d2dw4a1 a.4.1.18 (A:172-273) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.64 E-value=57 Score=20.83 Aligned_cols=67 Identities=9% Similarity=0.104 Sum_probs=50.6
Q ss_pred HHHhhhHHHHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 19 ELASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 19 ~~~~g~~~~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
++..+...++..+..++=.|.......+. ..+|.++....+... +..+... +.|+.+.|...|++..
T Consensus 27 e~~~~~~~~~~~Yl~iRN~Il~~w~~np~-~~Lt~~~~~~~l~~~--~~~d~~l-i~ri~~FL~~~G~INf 93 (102)
T d2dw4a1 27 DIISGPQQTQKVFLFIRNRTLQLWLDNPK-IQLTFEATLQQLEAP--YNSDTVL-VHRVHSYLERHGLINF 93 (102)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHHHHCTT-BCCCHHHHHHHSCTT--GGGCHHH-HHHHHHHHHHTTSSSC
T ss_pred HhhcCCCCCHHHHHHHHHHHHHHHHhCCC-eeeeHHHHHhhcccc--ccccHHH-HHHHHHHHHHcCceee
Confidence 33455666778889999999999988653 679999998887642 1111456 8899999999999983
No 234
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=32.16 E-value=18 Score=26.40 Aligned_cols=34 Identities=12% Similarity=-0.042 Sum_probs=28.8
Q ss_pred CCcceEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 041256 192 EHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL 225 (244)
Q Consensus 192 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 225 (244)
...++|+=||||...+..+..-+..+.+++++|.
T Consensus 47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~ 80 (233)
T d1djqa3 47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDT 80 (233)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cCCceEEEEcccHHHHHHHHHHHHhccceeeEee
Confidence 3569999999999998888876667889999985
No 235
>d2b0la1 a.4.5.66 (A:167-257) GTP-sensing transcriptional pleiotropic repressor CodY, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=31.90 E-value=6.8 Score=24.50 Aligned_cols=44 Identities=18% Similarity=0.311 Sum_probs=34.8
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
.||+.|... .|-+.+..||.+.|+. -.. +---||-+.+.|+++-
T Consensus 23 hIf~eL~g~--EGllvASkiADrvgiT------RSV-IVNALRK~ESAGvIEs 66 (91)
T d2b0la1 23 HIFEELDGN--EGLLVASKIADRVGIT------RSV-IVNALRKLESAGVIES 66 (91)
T ss_dssp HHTTSSBTT--EEEECHHHHHHHHTCC------HHH-HHHHHHHHHHTTSEEE
T ss_pred HHHHHcCCC--cceEeehhhhhhhCch------HHH-HHHHHHHhhhcceeee
Confidence 367777532 2678999999999996 345 7788999999999983
No 236
>d1nn4a_ c.121.1.1 (A:) Alternate ribose 5-phosphate isomerase B, RpiB {Escherichia coli [TaxId: 562]}
Probab=31.84 E-value=6.3 Score=28.12 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=25.3
Q ss_pred CCccHHHHHHHHHCCCCeEEEccchHHhhhCCCC
Q 041256 202 GGLGITLNMIISKYPHIKGINYDLPYVIKDAPSY 235 (244)
Q Consensus 202 GG~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~~ 235 (244)
||+|.-..-.+.++|++++.+.--+.....++++
T Consensus 79 CGtG~G~~IaANK~~GIRAa~~~d~~sA~~ar~H 112 (159)
T d1nn4a_ 79 CGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQH 112 (159)
T ss_dssp ESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHH
T ss_pred cCCchHHHHHHHhccCceeeeecchHHHHHHHHh
Confidence 5666666667899999999777667777777653
No 237
>d1ttya_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermotoga maritima [TaxId: 2336]}
Probab=31.81 E-value=12 Score=23.56 Aligned_cols=15 Identities=7% Similarity=0.084 Sum_probs=14.1
Q ss_pred CCCCHHHHHHhCCCC
Q 041256 49 AKLSVAEIVAQIPLK 63 (244)
Q Consensus 49 g~~t~~eLA~~~~~~ 63 (244)
.|.|..|||+.+|++
T Consensus 37 ~~~tl~eI~~~lgiS 51 (87)
T d1ttya_ 37 KPKTLEEVGQYFNVT 51 (87)
T ss_dssp SCCCHHHHHHHHTCC
T ss_pred CcCCHHHHHHHhCCC
Confidence 589999999999997
No 238
>d1oywa1 a.4.5.43 (A:407-516) DNA helicase RecQ DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=30.32 E-value=15 Score=23.93 Aligned_cols=39 Identities=13% Similarity=0.157 Sum_probs=28.0
Q ss_pred hhccHHHHHHHHhhCCcccceeecCCceeecCccccccccC
Q 041256 70 AAMTLDRVLRLLVSYNALHCSFVDGQRLYSLAPVSAYFVRN 110 (244)
Q Consensus 70 ~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~t~~s~~l~~~ 110 (244)
... ..+++|.|+..|++.++.+ .-+...+|+.+..+..+
T Consensus 60 ~~~-w~~li~qLv~~g~L~~~~~-~y~~l~lt~~g~~~l~g 98 (110)
T d1oywa1 60 HEH-WVSVIRQLIHLGLVTQNIA-QHSALQLTEAARPVLRG 98 (110)
T ss_dssp HHH-HHHHHHHHHHTTSEEEEGG-GTTEEEECGGGHHHHHT
T ss_pred HHH-HHHHHHHHHHcCCceeccC-cCCeEEECHHHHHHhCC
Confidence 346 9999999999999996422 23567778877644443
No 239
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}
Probab=29.17 E-value=18 Score=27.14 Aligned_cols=29 Identities=24% Similarity=0.190 Sum_probs=25.4
Q ss_pred EEEecCCccHHHHHHH-HHCCCCeEEEccc
Q 041256 197 LVDVGGGLGITLNMII-SKYPHIKGINYDL 225 (244)
Q Consensus 197 vvDVGGG~G~~~~~l~-~~~P~l~~~v~Dl 225 (244)
|+=||+|.+.+..++. .+.++++++++|.
T Consensus 36 ViVIGaGpaGL~aA~~LA~~~G~~V~vlE~ 65 (278)
T d1rp0a1 36 VVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 65 (278)
T ss_dssp EEEECCSHHHHHHHHHHHTSTTSCEEEEES
T ss_pred EEEECCCHHHHHHHHHHHHccCCeEEEEec
Confidence 8999999999988875 4678999999996
No 240
>d2icta1 a.35.1.3 (A:8-94) Antitoxin HigA {Escherichia coli [TaxId: 562]}
Probab=29.12 E-value=17 Score=22.57 Aligned_cols=15 Identities=13% Similarity=0.293 Sum_probs=13.5
Q ss_pred CCCCHHHHHHhCCCC
Q 041256 49 AKLSVAEIVAQIPLK 63 (244)
Q Consensus 49 g~~t~~eLA~~~~~~ 63 (244)
..+|-.+||+.+|++
T Consensus 13 ~glsq~~LA~~lGvs 27 (87)
T d2icta1 13 LNVSLREFARAMEIA 27 (87)
T ss_dssp HTCCHHHHHHHHTCC
T ss_pred cCCCHHHHHHHHhhc
Confidence 369999999999997
No 241
>d1qpza1 a.35.1.5 (A:2-58) Purine repressor (PurR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.94 E-value=17 Score=20.90 Aligned_cols=12 Identities=0% Similarity=0.318 Sum_probs=10.3
Q ss_pred CHHHHHHhCCCC
Q 041256 52 SVAEIVAQIPLK 63 (244)
Q Consensus 52 t~~eLA~~~~~~ 63 (244)
|+.|||+.+|++
T Consensus 2 Ti~dvA~~agVS 13 (57)
T d1qpza1 2 TIKDVAKRANVS 13 (57)
T ss_dssp CHHHHHHHHTSC
T ss_pred CHHHHHHHHCcC
Confidence 788899999886
No 242
>d1ghca_ a.4.5.13 (A:) Histone H1, globular domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=27.91 E-value=14 Score=22.60 Aligned_cols=50 Identities=22% Similarity=0.254 Sum_probs=32.9
Q ss_pred CCCCHHHHHHhCCCCCCCCc-chhccHHHHHHHHhhCCcccceeecC---CceeecC
Q 041256 49 AKLSVAEIVAQIPLKDNNPE-AAAMTLDRVLRLLVSYNALHCSFVDG---QRLYSLA 101 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~-~~~~~l~rlLr~L~~~gll~~~~~~~---~~~y~~t 101 (244)
++.|...|.+.+.....|+. .... +.+-|.-++..|.|.+. .+ .|.|+++
T Consensus 21 ~GsS~~AI~kyI~~~~~~~~~~~~~-l~~aLk~~v~~G~l~q~--kG~GasGsfkl~ 74 (75)
T d1ghca_ 21 KGLSLAALKKALAAGGYDVEKNNSR-IKLGLKSLVSKGTLVQT--KGTGASGSFRLS 74 (75)
T ss_dssp SCCTTSSGGGSSSSSSCCSSSSHHH-HHHHTTTHHHHTSSCCC--CCSTTSCCCCSC
T ss_pred CCcCHHHHHHHHHHhccCccchHHH-HHHHHHHHHhcCCEEee--ccCCccceeeeC
Confidence 57888888887764311121 1235 88888889999999863 23 3677765
No 243
>d1jt6a1 a.4.1.9 (A:2-72) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=27.52 E-value=30 Score=20.14 Aligned_cols=22 Identities=23% Similarity=0.200 Sum_probs=17.0
Q ss_pred HHhhcCCCCCCCHHHHHHhCCCC
Q 041256 41 IISKAGPGAKLSVAEIVAQIPLK 63 (244)
Q Consensus 41 ~L~~~~~~g~~t~~eLA~~~~~~ 63 (244)
.+.+.|. ...|+.+||+.+|++
T Consensus 13 l~~~~G~-~~~s~~~Ia~~agvs 34 (71)
T d1jt6a1 13 LFIKNGY-NATTTGEIVKLSESS 34 (71)
T ss_dssp HHHHHCT-TTCCHHHHHHHTTCC
T ss_pred HHHHhCc-cccCHHHHHHHHCcC
Confidence 4455444 479999999999997
No 244
>d2v9va2 a.4.5.35 (A:438-510) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=27.43 E-value=25 Score=20.82 Aligned_cols=46 Identities=17% Similarity=0.143 Sum_probs=34.0
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccceeecCCceeecCcc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCSFVDGQRLYSLAPV 103 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~t~~ 103 (244)
.+++.++|-..+... -+ +.. ...+|..|+..|.+.. . .+.+++...
T Consensus 25 ~G~~keeLr~~l~~~--~~--~~~-f~~lL~~l~~~g~l~~---~-g~~v~L~~f 70 (73)
T d2v9va2 25 PGLAREELRSRYFSR--LP--ARV-YQALLEEWSREGRLQL---A-ANTVALAGF 70 (73)
T ss_dssp SCEEHHHHHHHHCTT--SC--HHH-HHHHHHHHHHTTSEEE---C-SSEEEETTC
T ss_pred cCCCHHHHHHHhccc--CC--HHH-HHHHHHHHHHCCChhe---e-CCEEECCCC
Confidence 578999999998432 11 456 9999999999999983 3 466776553
No 245
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=27.14 E-value=10 Score=26.09 Aligned_cols=13 Identities=23% Similarity=0.291 Sum_probs=10.0
Q ss_pred CcceEEEecCCcc
Q 041256 193 HVKKLVDVGGGLG 205 (244)
Q Consensus 193 ~~~~vvDVGGG~G 205 (244)
+...|+|||||+=
T Consensus 6 g~~lviDIG~gTt 18 (161)
T d2fsja1 6 GYGVVIDVGSRTT 18 (161)
T ss_dssp SEEEEEEECSSCE
T ss_pred CcEEEEEcCcCeE
Confidence 4467999999864
No 246
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}
Probab=26.26 E-value=52 Score=21.13 Aligned_cols=35 Identities=20% Similarity=0.119 Sum_probs=24.5
Q ss_pred CCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 041256 191 FEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL 225 (244)
Q Consensus 191 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl 225 (244)
++.+++|+=||||.-..=.+-.-+.-+.+.+++++
T Consensus 19 l~~p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~ 53 (117)
T d1onfa2 19 IKESKKIGIVGSGYIAVELINVIKRLGIDSYIFAR 53 (117)
T ss_dssp CCCCSEEEEECCSHHHHHHHHHHHTTTCEEEEECS
T ss_pred cCCCCEEEEECCchHHHHHHHHHHhccccceeeeh
Confidence 56689999999997443333333455788988886
No 247
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=26.06 E-value=27 Score=20.22 Aligned_cols=15 Identities=33% Similarity=0.259 Sum_probs=13.6
Q ss_pred CCCCHHHHHHhCCCC
Q 041256 49 AKLSVAEIVAQIPLK 63 (244)
Q Consensus 49 g~~t~~eLA~~~~~~ 63 (244)
...|.+|||+.+|++
T Consensus 33 ~~~s~~eIA~~lgis 47 (68)
T d1or7a1 33 DGLSYEEIAAIMDCP 47 (68)
T ss_dssp TCCCHHHHHHHTTSC
T ss_pred hCCCHHHHHHHHCcC
Confidence 468999999999997
No 248
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]}
Probab=25.89 E-value=31 Score=25.93 Aligned_cols=50 Identities=20% Similarity=0.187 Sum_probs=39.0
Q ss_pred HHHHHhhcCCCCCcceEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHhhhCCC
Q 041256 181 MEKVLESYKGFEHVKKLVDVGGGLGITLNMIISKYPHIKGINYDL-PYVIKDAPS 234 (244)
Q Consensus 181 ~~~~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 234 (244)
...++..+. ...-.|+|-=+|+|..+.+..+. +-++|.+|+ |+-++.+++
T Consensus 240 ~~rlI~~~s--~~gdiVlDpF~GSGTT~~AA~~l--gR~~Ig~El~~~y~~~a~~ 290 (320)
T d1booa_ 240 PEFFIRMLT--EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAF 290 (320)
T ss_dssp HHHHHHHHC--CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHG
T ss_pred HHHhhhhcc--cCCCEEEecCCCCcHHHHHHHHc--CCcEEEEeCCHHHHHHHHH
Confidence 345555543 34579999999999999998887 678999999 788887754
No 249
>d2ar0a1 c.66.1.45 (A:6-529) M.EcoKI {Escherichia coli [TaxId: 562]}
Probab=25.66 E-value=23 Score=29.71 Aligned_cols=30 Identities=13% Similarity=-0.027 Sum_probs=21.6
Q ss_pred HHhhcCCCCCcceEEEecCCccHHHHHHHHH
Q 041256 184 VLESYKGFEHVKKLVDVGGGLGITLNMIISK 214 (244)
Q Consensus 184 ~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~ 214 (244)
+++..+ -....+|+|-.||+|.++.+..+.
T Consensus 156 mv~ll~-~~~~~~i~DPacGsG~fL~~a~~~ 185 (524)
T d2ar0a1 156 IIHLLK-PQPREVVQDPAAGTAGFLIEADRY 185 (524)
T ss_dssp HHHHHC-CCTTCCEEETTCTTTHHHHHHHHH
T ss_pred hhhccc-CccchhhcchhhhcchhhHHHHHH
Confidence 344444 244578999999999999887653
No 250
>d1in4a1 a.4.5.11 (A:255-329) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=25.07 E-value=35 Score=20.75 Aligned_cols=57 Identities=14% Similarity=0.188 Sum_probs=36.8
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHH-HHHhhCCcccceeecCCceeecCccc
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVL-RLLVSYNALHCSFVDGQRLYSLAPVS 104 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlL-r~L~~~gll~~~~~~~~~~y~~t~~s 104 (244)
.+...|.+.-.+||..++.||..++-+ .+- +.-+. =+|...||+.+ +.-|+ ..|+.+
T Consensus 9 ~yL~~l~~~f~ggPvGl~tlAa~l~e~------~~T-iEdviEPyLiq~G~i~R---TpRGR-~~T~~~ 66 (75)
T d1in4a1 9 KILKTIIEIYRGGPVGLNALAASLGVE------ADT-LSEVYEPYLLQAGFLAR---TPRGR-IVTEKA 66 (75)
T ss_dssp HHHHHHHHHSTTCCBCHHHHHHHHTSC------HHH-HHHHTHHHHHHTTSEEE---ETTEE-EECHHH
T ss_pred HHHHHHHHHhCCCCCcHHHHHHHHcCC------hhH-HHHHhhHHHHHhhHHhh---CCchH-HhHHHH
Confidence 344455443223899999999999986 333 44444 47899999995 44465 444444
No 251
>d2g7ga1 a.4.1.9 (A:9-73) Putative transcriptional regulator Rha04620 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=24.92 E-value=22 Score=20.55 Aligned_cols=15 Identities=0% Similarity=0.359 Sum_probs=13.7
Q ss_pred CCCCHHHHHHhCCCC
Q 041256 49 AKLSVAEIVAQIPLK 63 (244)
Q Consensus 49 g~~t~~eLA~~~~~~ 63 (244)
|..|..+||+++|++
T Consensus 18 G~~ti~~Ia~~agvs 32 (65)
T d2g7ga1 18 GDFRMPDLARHLNVQ 32 (65)
T ss_dssp SSCCHHHHHHHTTSC
T ss_pred CCCCHHHHHHHhCcc
Confidence 479999999999997
No 252
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.92 E-value=39 Score=23.17 Aligned_cols=42 Identities=21% Similarity=0.065 Sum_probs=29.1
Q ss_pred CCCcceEEEecCC-ccHHHHHHHHHCCCCeEEEccc-hHHhhhCC
Q 041256 191 FEHVKKLVDVGGG-LGITLNMIISKYPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 191 ~~~~~~vvDVGGG-~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 233 (244)
.....+|+-+|+| .|.++..+++.+ +.+.++.|. |+-.+.++
T Consensus 25 ~~~g~~vlI~GaG~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~a~ 68 (168)
T d1piwa2 25 CGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAM 68 (168)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHH
T ss_pred cCCCCEEEEECCCCcchhHHHHhhhc-cccccccccchhHHHHhh
Confidence 5555677778877 677888887764 789988886 44444443
No 253
>d1t6sa1 a.4.5.60 (A:1-85) Segregation and condensation protein B, ScpB {Chlorobium tepidum [TaxId: 1097]}
Probab=24.73 E-value=33 Score=21.05 Aligned_cols=29 Identities=10% Similarity=0.068 Sum_probs=20.0
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHh
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLV 82 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~ 82 (244)
.|+|.++|++.++.+ .. +.. +...|..|.
T Consensus 21 ~Pls~~~L~~~l~~~---~~-~~~-i~~~l~~L~ 49 (85)
T d1t6sa1 21 EPVNLQTLSQITAHK---FT-PSE-LQEAVDELN 49 (85)
T ss_dssp SCBCHHHHHHHTTCC---CC-HHH-HHHHHHHHH
T ss_pred CCCCHHHHHHHHccC---CC-HHH-HHHHHHHHH
Confidence 699999999999742 11 334 666666654
No 254
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.66 E-value=29 Score=26.62 Aligned_cols=31 Identities=16% Similarity=0.323 Sum_probs=24.3
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
+.+|+++||+++++. ..-++..|..+|++..
T Consensus 202 ~~isI~~is~~T~i~----------~~Dii~tL~~l~~l~~ 232 (271)
T d2giva1 202 GTLSIKDLSQMTSIT----------QNDIISTLQSLNMVKY 232 (271)
T ss_dssp ---CHHHHHHHHCBC----------HHHHHHHHHHTTCEEE
T ss_pred CCccHHHHHHHhCCC----------HHHHHHHHHHCCCEEE
Confidence 579999999999996 3458889999999985
No 255
>d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=24.54 E-value=20 Score=20.89 Aligned_cols=23 Identities=9% Similarity=0.306 Sum_probs=17.2
Q ss_pred hHHhhcCCCCCCCHHHHHHhCCCC
Q 041256 40 EIISKAGPGAKLSVAEIVAQIPLK 63 (244)
Q Consensus 40 d~L~~~~~~g~~t~~eLA~~~~~~ 63 (244)
+.+.+.|. ...|+.+||+++|++
T Consensus 15 ~l~~~~g~-~~~si~~ia~~~gvs 37 (68)
T d2g7la1 15 ALMRAEGL-EKVTMRRLAQELDTG 37 (68)
T ss_dssp HHHHHHCS-SSCCHHHHHHHTTSC
T ss_pred HHHHHhCc-ccCCHHHHHHHHCcC
Confidence 33444443 479999999999997
No 256
>d1yg2a_ a.4.5.61 (A:) Hypothetical protein AphA {Vibrio cholerae [TaxId: 666]}
Probab=24.53 E-value=29 Score=24.34 Aligned_cols=63 Identities=11% Similarity=0.192 Sum_probs=42.5
Q ss_pred ChhhHHhhcCCCCCCCHHHHHHhCCCCC---CCCcchhccHHHHHHHHhhCCcccceeecC-----CceeecCcccc
Q 041256 37 DVFEIISKAGPGAKLSVAEIVAQIPLKD---NNPEAAAMTLDRVLRLLVSYNALHCSFVDG-----QRLYSLAPVSA 105 (244)
Q Consensus 37 gifd~L~~~~~~g~~t~~eLA~~~~~~~---~~~~~~~~~l~rlLr~L~~~gll~~~~~~~-----~~~y~~t~~s~ 105 (244)
-|.-.|.+ +|.|-=||.+.+.... -+.. ... ++..|+-|...|+++...+.+ ...|+.|+.++
T Consensus 5 ~iLg~L~~----~~~~GYei~~~~~~~~~~~w~~s-~g~-iY~~L~kLe~~Gli~~~~~~~~~~~~rk~Y~iT~~Gr 75 (178)
T d1yg2a_ 5 VILTVLST----RDATGYDITKEFSASIGYFWKAS-HQQ-VYRELNKMGEQGLVTCVLEPQEGKPDRKVYSITQAGR 75 (178)
T ss_dssp HHHHHHHH----CCBCHHHHHHHHTTGGGGTCCCC-HHH-HHHHHHHHHHTTSEEECCC---------CEEECHHHH
T ss_pred HHHHHHhh----CCCCHHHHHHHHHHHhCCccCCC-CCc-HHHHHHHHHHCCCeEEEeeecCCCCCceEEEECHHHH
Confidence 35566776 6899999999886320 0121 345 999999999999997422211 13699999986
No 257
>d1v7ba1 a.4.1.9 (A:1-74) Transcriptional regulator Cgl2612 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=24.41 E-value=30 Score=20.29 Aligned_cols=23 Identities=17% Similarity=0.193 Sum_probs=17.7
Q ss_pred hHHhhcCCCCCCCHHHHHHhCCCC
Q 041256 40 EIISKAGPGAKLSVAEIVAQIPLK 63 (244)
Q Consensus 40 d~L~~~~~~g~~t~~eLA~~~~~~ 63 (244)
+.+.+.|- ...|..+||+++|++
T Consensus 15 ~l~~~~G~-~~~s~~~Ia~~agvs 37 (74)
T d1v7ba1 15 DYIGEYSL-ETLSYDSLAEATGLS 37 (74)
T ss_dssp HHHHHSCS-TTCCHHHHHHHHCSC
T ss_pred HHHHHhCc-cccCHHHHHHHhCcC
Confidence 34555544 579999999999997
No 258
>d1ku2a1 a.4.13.1 (A:273-332) Sigma factor SigA {Thermus aquaticus [TaxId: 271]}
Probab=24.24 E-value=18 Score=20.97 Aligned_cols=15 Identities=20% Similarity=0.100 Sum_probs=12.4
Q ss_pred CCCCHHHHHHhCCCC
Q 041256 49 AKLSVAEIVAQIPLK 63 (244)
Q Consensus 49 g~~t~~eLA~~~~~~ 63 (244)
..-|.+|||+++|++
T Consensus 27 RePt~eEiA~~l~~~ 41 (60)
T d1ku2a1 27 REPSYEEIAEAMGPG 41 (60)
T ss_dssp SCCCHHHHHHHHCSS
T ss_pred CCCCHHHHHHHHCCC
Confidence 367999999999863
No 259
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.15 E-value=62 Score=19.84 Aligned_cols=41 Identities=15% Similarity=0.232 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHh
Q 041256 25 VLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLV 82 (244)
Q Consensus 25 ~~~~~L~~a~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~ 82 (244)
...+|++.|++. .. -|.|..|||+..+++ +.- +.+..+.+.
T Consensus 47 i~AA~iY~acr~------~~----~p~t~~eIa~~~~i~------~~~-i~k~~k~i~ 87 (95)
T d1vola1 47 IASACLYIACRQ------EG----VPRTFKEICAVSRIS------KKE-IGRCFKLIL 87 (95)
T ss_dssp HHHHHHHHHHHH------TT----CCCCHHHHHTTTCSC------HHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHH------cC----CCCCHHHHHHHhCCC------HHH-HHHHHHHHH
Confidence 455677777764 22 599999999999997 333 655555443
No 260
>d1hkva2 c.1.6.1 (A:46-310) Diaminopimelate decarboxylase LysA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.88 E-value=18 Score=27.30 Aligned_cols=12 Identities=67% Similarity=1.124 Sum_probs=10.2
Q ss_pred ceEEEecCCccH
Q 041256 195 KKLVDVGGGLGI 206 (244)
Q Consensus 195 ~~vvDVGGG~G~ 206 (244)
-.++|||||.|.
T Consensus 205 l~~ldiGGG~~v 216 (265)
T d1hkva2 205 IATVDLGGGLGI 216 (265)
T ss_dssp CCEEECCCCBCC
T ss_pred cceeeecCCCCc
Confidence 679999999863
No 261
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=23.55 E-value=26 Score=21.28 Aligned_cols=24 Identities=13% Similarity=0.073 Sum_probs=20.1
Q ss_pred HHHHHHHHhhCCcccceeecCCceeecC
Q 041256 74 LDRVLRLLVSYNALHCSFVDGQRLYSLA 101 (244)
Q Consensus 74 l~rlLr~L~~~gll~~~~~~~~~~y~~t 101 (244)
+..+|+-|.-+||+++ . ++.|..+
T Consensus 41 ls~lL~nL~k~~~iek---~-~~~Y~i~ 64 (73)
T d2fnaa1 41 IYNYLTQLTKHSWIIK---E-GEKYCPS 64 (73)
T ss_dssp HHHHHHHHHHTTSEEE---S-SSCEEES
T ss_pred HHHHHHHHHHcCceee---c-CCeeccC
Confidence 9999999999999994 3 4668765
No 262
>d1ixca1 a.4.5.37 (A:1-89) LysR-type regulatory protein CbnR {Ralstonia eutropha [TaxId: 106590]}
Probab=23.38 E-value=22 Score=22.08 Aligned_cols=59 Identities=17% Similarity=0.237 Sum_probs=39.9
Q ss_pred hcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhh---CCcccceeecCCceeecCcccccccc
Q 041256 35 ELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVS---YNALHCSFVDGQRLYSLAPVSAYFVR 109 (244)
Q Consensus 35 ~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~---~gll~~~~~~~~~~y~~t~~s~~l~~ 109 (244)
.|.+|-.+.+. .++..-|+.++++ +.. +.+-++.|.. .-+|.+ . ...+.+|+.+..+..
T Consensus 5 ~L~~f~~v~e~-----gs~~~AA~~L~is------q~a-vs~~i~~LE~~lg~~Lf~R---~-~~~~~lT~~G~~l~~ 66 (89)
T d1ixca1 5 QLKYFIAVAEA-----GNMAAAAKRLHVS------QPP-ITRQMQALEADLGVVLLER---S-HRGIELTAAGHAFLE 66 (89)
T ss_dssp HHHHHHHHHHH-----SSHHHHHHHHTCC------HHH-HHHHHHHHHHHHTSCCBC---------CCBCHHHHHHHH
T ss_pred HHHHHHHHHHh-----CCHHHHHHHhCCC------hHH-HHHHHHHHHhcCCceeeEe---c-CCccCccHhHHHHHH
Confidence 46678888884 4889999999997 345 6666666654 567874 3 366889998876553
No 263
>d2ns0a1 a.4.5.76 (A:1-85) Hypothetical protein RHA1_ro06458 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=23.33 E-value=72 Score=19.73 Aligned_cols=54 Identities=9% Similarity=0.136 Sum_probs=38.3
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
++--|++.|...+++.++...|+|..++-++-.+-. .. +++..+.|+..|.+..
T Consensus 8 le~~Il~Ll~~R~~~~ticPsEvARal~~~~WR~lM-~~-vR~aA~~La~~G~i~I 61 (85)
T d2ns0a1 8 LEECIRALLDARADSASICPSDVARAVAPDDWRPLM-EP-VREAAGRLADAGEVEV 61 (85)
T ss_dssp HHHHHHHHHHHSCTTCCBCHHHHHHHHCTTSCGGGH-HH-HHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHhcCCCCCcCHHHHHHHhCcHhhHHHh-HH-HHHHHHHHHHCCcEEE
Confidence 444567888877766789999999998753111111 23 7888889999998875
No 264
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=22.38 E-value=37 Score=22.03 Aligned_cols=26 Identities=12% Similarity=0.291 Sum_probs=21.7
Q ss_pred HhcChhhHHhhcCCCCCCCHHHHHHhCCCC
Q 041256 34 VELDVFEIISKAGPGAKLSVAEIVAQIPLK 63 (244)
Q Consensus 34 ~~lgifd~L~~~~~~g~~t~~eLA~~~~~~ 63 (244)
.+-.|++.|.+ +++|+.+||+.+++.
T Consensus 12 ~RerIi~lL~~----~~~ta~eia~~l~i~ 37 (105)
T d2gmga1 12 RREKIIELLLE----GDYSPSELARILDMR 37 (105)
T ss_dssp HHHHHHHHTTT----SCBCTTHHHHSSCCC
T ss_pred HHHHHHHHHHc----CCCCHHHHHHHhccc
Confidence 45568888977 589999999999985
No 265
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=22.34 E-value=30 Score=22.11 Aligned_cols=29 Identities=17% Similarity=0.147 Sum_probs=23.9
Q ss_pred CCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccce
Q 041256 51 LSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHCS 90 (244)
Q Consensus 51 ~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 90 (244)
.|..|+|+.+|++ + +-||+-...|++...
T Consensus 3 ytI~e~A~~~gvs------~-----~tlR~Ye~~GLl~p~ 31 (109)
T d1r8da_ 3 YQVKQVAEISGVS------I-----RTLHHYDNIELLNPS 31 (109)
T ss_dssp BCHHHHHHHHSCC------H-----HHHHHHHHTTSSCCS
T ss_pred ccHHHHHHHHCcC------H-----HHHHHHHHcCCcCCc
Confidence 5889999999996 2 478888899999843
No 266
>d1knwa2 c.1.6.1 (A:32-278) Diaminopimelate decarboxylase LysA {Escherichia coli [TaxId: 562]}
Probab=22.24 E-value=13 Score=27.83 Aligned_cols=11 Identities=36% Similarity=0.791 Sum_probs=9.4
Q ss_pred ceEEEecCCcc
Q 041256 195 KKLVDVGGGLG 205 (244)
Q Consensus 195 ~~vvDVGGG~G 205 (244)
-.+||||||-|
T Consensus 188 ~~~ldiGGGf~ 198 (247)
T d1knwa2 188 LQAISAGGGLS 198 (247)
T ss_dssp CSEEECCCCCC
T ss_pred ceEEEecCccc
Confidence 46899999977
No 267
>d1twia2 c.1.6.1 (A:50-313) Diaminopimelate decarboxylase LysA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=22.12 E-value=13 Score=28.06 Aligned_cols=12 Identities=58% Similarity=1.024 Sum_probs=10.2
Q ss_pred ceEEEecCCccH
Q 041256 195 KKLVDVGGGLGI 206 (244)
Q Consensus 195 ~~vvDVGGG~G~ 206 (244)
-.++|||||-|.
T Consensus 207 ~~~ldiGGGf~v 218 (264)
T d1twia2 207 IEDVNLGGGLGI 218 (264)
T ss_dssp CSEEECCCCBCC
T ss_pred ccEEeecCCccc
Confidence 678999999864
No 268
>d1ufma_ a.4.5.47 (A:) COP9 signalosome complex subunit 4, GSN4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.79 E-value=31 Score=21.24 Aligned_cols=33 Identities=12% Similarity=0.299 Sum_probs=28.7
Q ss_pred CCCCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccc
Q 041256 49 AKLSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALH 88 (244)
Q Consensus 49 g~~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~ 88 (244)
..++.+.||+.++++ ++. +..++.-|...|-+.
T Consensus 29 ~~Isl~~la~~l~l~------~~e-vE~~l~~mI~~~~i~ 61 (84)
T d1ufma_ 29 NNITFEELGALLEIP------AAK-AEKIASQMITEGRMN 61 (84)
T ss_dssp SEEEHHHHHHHTTSC------HHH-HHHHHHHHHHTTSSC
T ss_pred ceeeHHHHHHHHCCC------HHH-HHHHHHHHHhcCeEE
Confidence 368999999999997 566 999999999999886
No 269
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=20.81 E-value=28 Score=22.57 Aligned_cols=27 Identities=15% Similarity=0.255 Sum_probs=22.5
Q ss_pred CCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCccc
Q 041256 51 LSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALH 88 (244)
Q Consensus 51 ~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~ 88 (244)
.|..|+|+.+|++ + +.||+-...|++.
T Consensus 4 ytI~evA~~~gvs------~-----~tlR~Ye~~GLl~ 30 (118)
T d1r8ea1 4 YSIGEVSKLANVS------I-----KALRYYDKIDLFK 30 (118)
T ss_dssp EEHHHHHHHHTCC------H-----HHHHHHHHTTSSC
T ss_pred ccHHHHHHHHCcC------H-----HHHHHHHHcCCcc
Confidence 5789999999996 2 4678888899996
No 270
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}
Probab=20.55 E-value=82 Score=21.66 Aligned_cols=43 Identities=14% Similarity=0.000 Sum_probs=31.8
Q ss_pred CCCcceEEEecCCc-cHHHHHHHHHCCCCeEEEccc-hHHhhhCC
Q 041256 191 FEHVKKLVDVGGGL-GITLNMIISKYPHIKGINYDL-PYVIKDAP 233 (244)
Q Consensus 191 ~~~~~~vvDVGGG~-G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 233 (244)
.+...+|+=+|+|. |.++.++++..-.-+.++.|. ++-.+.++
T Consensus 26 v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~ 70 (174)
T d1e3ia2 26 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK 70 (174)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHH
Confidence 45557777788876 899999999987778888887 44444444
No 271
>d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=20.46 E-value=48 Score=19.23 Aligned_cols=23 Identities=13% Similarity=0.138 Sum_probs=17.3
Q ss_pred hHHhhcCCCCCCCHHHHHHhCCCC
Q 041256 40 EIISKAGPGAKLSVAEIVAQIPLK 63 (244)
Q Consensus 40 d~L~~~~~~g~~t~~eLA~~~~~~ 63 (244)
+.+.+.|- ...|..+||+++|++
T Consensus 15 ~l~~~~G~-~~~ti~~Ia~~agvs 37 (72)
T d1pb6a1 15 DTFSQFGF-HGTRLEQIAELAGVS 37 (72)
T ss_dssp HHHHHHCT-TTCCHHHHHHHTTSC
T ss_pred HHHHHhCc-cccCHHHHHHHhCCC
Confidence 34455443 479999999999997
No 272
>d2fq4a1 a.4.1.9 (A:9-77) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]}
Probab=20.29 E-value=36 Score=19.69 Aligned_cols=23 Identities=17% Similarity=0.365 Sum_probs=17.2
Q ss_pred hHHhhcCCCCCCCHHHHHHhCCCC
Q 041256 40 EIISKAGPGAKLSVAEIVAQIPLK 63 (244)
Q Consensus 40 d~L~~~~~~g~~t~~eLA~~~~~~ 63 (244)
+.+.+.|. ...|..+||++.|++
T Consensus 15 ~l~~~~G~-~~~t~~~Ia~~agvs 37 (69)
T d2fq4a1 15 ELLLESGF-KAVTVDKIAERAKVS 37 (69)
T ss_dssp HHHHHHCT-TTCCHHHHHHHHTCC
T ss_pred HHHHHhCc-ccCCHHHHHHHHCcC
Confidence 34555443 468999999999997
No 273
>d1q06a_ a.6.1.3 (A:) Transcriptional regulator CueR {Escherichia coli [TaxId: 562]}
Probab=20.27 E-value=36 Score=22.37 Aligned_cols=28 Identities=7% Similarity=0.247 Sum_probs=23.3
Q ss_pred CCHHHHHHhCCCCCCCCcchhccHHHHHHHHhhCCcccc
Q 041256 51 LSVAEIVAQIPLKDNNPEAAAMTLDRVLRLLVSYNALHC 89 (244)
Q Consensus 51 ~t~~eLA~~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~ 89 (244)
+++.|+|+.+|++ + +-||+=...|++..
T Consensus 1 m~Ige~A~~~gvs------~-----~TlR~Ye~~GLl~p 28 (127)
T d1q06a_ 1 MNISDVAKITGLT------S-----KAIRFYEEKGLVTP 28 (127)
T ss_dssp CCHHHHHHHHTCC------H-----HHHHHHHHTTCSCC
T ss_pred CCHHHHHHHHCcC------H-----HHHHHHHHcCCCCC
Confidence 4789999999995 2 57888899999984
No 274
>d1hlva1 a.4.1.7 (A:1-66) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.12 E-value=36 Score=20.07 Aligned_cols=36 Identities=14% Similarity=0.279 Sum_probs=26.2
Q ss_pred HHhcChhhHHhhcCCCCC-CCHHHHHHhCCCCCCCCcchhccHHHHHH
Q 041256 33 VVELDVFEIISKAGPGAK-LSVAEIVAQIPLKDNNPEAAAMTLDRVLR 79 (244)
Q Consensus 33 a~~lgifd~L~~~~~~g~-~t~~eLA~~~~~~~~~~~~~~~~l~rlLr 79 (244)
.-++.|...+.. || .+-.|||+..|++ ..- +..+|+
T Consensus 11 ~eK~~ii~~~e~----g~k~sq~eIA~~fGv~------~ST-vs~IlK 47 (66)
T d1hlva1 11 REKSRIIQEVEE----NPDLRKGEIARRFNIP------PST-LSTILK 47 (66)
T ss_dssp HHHHHHHHHHHH----CTTSCHHHHHHHHTCC------HHH-HHHHHH
T ss_pred HHHHHHHHHHHc----CCcchHHHHHHHhCCC------hhH-HHHHHH
Confidence 345667778877 45 5889999999995 334 777765
Done!